Citrus Sinensis ID: 033992

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100------
Protein Sequence
MASIAMSCSAAVPGFRFNKSPMAAGVVTARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
Secondary Structure (PSIPRED)
cccccccccccccccEEccccccEEEEEEEEEEEEEEcccccccccccccccccEEEEEEccccccccEEEEEEcccccccccccccHHHHHHcccccccEEEEcc
Secondary Structure Prediction (SSPRO)
cccEEccccccccccEccccccccccccccccEEEEEEcccccccccHccccccEEEEEEHcccccccEEEEEEcccccccccccccHHHccccccccccEEEEcc
Coil and Loop (DISEMBL)
masiamscsaavpgfrfnkspmaagvvtarpRRVVVVRAegqginldirkteEKVVDSVVVTELskpltaycrcwrsgtfplcdgshvkhnkatgdnvgplllkkq
Flexible Loop (DISEMBL)
MASIAMSCSAAVPGFRFNKSpmaagvvtarprrvVVVRaegqginldirkteekvvdsvvvtelskpltaYCRCWRSGTFPlcdgshvkhnkatgdnvgplllkkq
Low Complexity Region (SEG)
MASIAMSCSAAVPGFRFNKSPMaagvvtarprrvvvvraEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
Disordered region (IsUnstruct)
**********AVPGFRFNKSPMAAGVVTARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVK*****************
Disordered Region (DISOPRED)
***********VPGFRFNKSPMAAGVVTARPRRVVVVRA****INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLK**
Disordered Region (DISEMBL)
MASIAMSCSAAVPGFRFNKSPMAAGVVTARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
Disordered Region (DISPRO)
*********AAVPGFRFNKSPMAAGVVTARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASIAMSCSAAVPGFRFNKSPMAAGVVTARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	106	2.2.26 [Sep-21-2011]
Q6PCF8	135	CDGSH iron-sulfur domain-	N/A	no	0.773	0.607	0.512	1e-18
Q6AZG1	135	CDGSH iron-sulfur domain-	N/A	no	0.773	0.607	0.512	4e-18
Q7T326	135	CDGSH iron-sulfur domain-	yes	no	0.594	0.466	0.603	5e-18
Q5I027	135	CDGSH iron-sulfur domain-	yes	no	0.773	0.607	0.512	5e-18
C1BI29	135	CDGSH iron-sulfur domain-	N/A	no	0.745	0.585	0.506	5e-18
C1C524	135	CDGSH iron-sulfur domain-	N/A	no	0.773	0.607	0.512	7e-18
Q8N5K1	135	CDGSH iron-sulfur domain-	yes	no	0.773	0.607	0.512	1e-17
Q05B71	135	CDGSH iron-sulfur domain-	yes	no	0.773	0.607	0.512	1e-17
Q9CQB5	135	CDGSH iron-sulfur domain-	yes	no	0.773	0.607	0.512	1e-17
B9EPI1	135	CDGSH iron-sulfur domain-	N/A	no	0.745	0.585	0.506	1e-17

>sp|Q6PCF8|CID2A_XENLA CDGSH iron-sulfur domain-containing protein 2A OS=Xenopus laevis GN=cisd2-a PE=2 SV=1

 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 55/82 (67%)

Query: 25  GVVTARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCD 84
           G +  RP  +   + +   INL I+K   KVV+ + + +L     AYCRCWRS TFP+CD
Sbjct: 52  GYLAIRPFLLKKKQQKDSLINLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCD 111

Query: 85  GSHVKHNKATGDNVGPLLLKKQ 106
           GSH KHN+ TGDNVGPL+LKK+
Sbjct: 112 GSHNKHNELTGDNVGPLILKKK 133

Regulator of autophagy that contributes to antagonize becn1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of bcl2 with becn1 and is required for bcl2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy.
Xenopus laevis (taxid: 8355)

>sp|Q6AZG1|CID2B_XENLA CDGSH iron-sulfur domain-containing protein 2B OS=Xenopus laevis GN=cisd2-b PE=2 SV=1

 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 54/82 (65%)

Query: 25  GVVTARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCD 84
           G +  RP      + +   INL I+K   KVV+ + + +L     AYCRCWRS TFP+CD
Sbjct: 52  GYLAIRPFLPKKKQQKDSLINLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCD 111

Query: 85  GSHVKHNKATGDNVGPLLLKKQ 106
           GSH KHN+ TGDNVGPL+LKK+
Sbjct: 112 GSHNKHNELTGDNVGPLILKKK 133

Regulator of autophagy that contributes to antagonize becn1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of bcl2 with becn1 and is required for bcl2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy.

Xenopus laevis (taxid: 8355)

>sp|Q7T326|CISD2_DANRE CDGSH iron-sulfur domain-containing protein 2 OS=Danio rerio GN=cisd2 PE=2 SV=1

 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 48/63 (76%)

Query: 44  INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
           INL I+K   KVV+ + + +L  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEIDIEDLRTPNVCYCRCWRSKTFPVCDKSHIKHNELTGDNVGPLIL 130

Query: 104 KKQ 106
           KK+
Sbjct: 131 KKK 133

Regulator of autophagy that contributes to antagonize becn1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of bcl2 with becn1 and is required for bcl2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy.

Danio rerio (taxid: 7955)

>sp|Q5I027|CISD2_XENTR CDGSH iron-sulfur domain-containing protein 2 OS=Xenopus tropicalis GN=cisd2 PE=2 SV=1

 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 54/82 (65%)

Query: 25  GVVTARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCD 84
           G +  RP      + +   INL I+K   KVV+ + + +L     AYCRCWRS TFP+CD
Sbjct: 52  GYLAIRPFLPKKKQQKDSLINLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCD 111

Query: 85  GSHVKHNKATGDNVGPLLLKKQ 106
           GSH KHN+ TGDNVGPL+LKK+
Sbjct: 112 GSHNKHNELTGDNVGPLILKKK 133

Regulator of autophagy that contributes to antagonize becn1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of bcl2 with becn1 and is required for bcl2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy.

Xenopus tropicalis (taxid: 8364)

>sp|C1BI29|CID2A_ONCMY CDGSH iron-sulfur domain-containing protein 2A OS=Oncorhynchus mykiss GN=cisd2a PE=2 SV=1

 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 55/79 (69%)

Query: 28  TARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSH 87
           T RP      + +   INL+I+K   KVV+ + + +L++    YCRCWRS TFP+CD SH
Sbjct: 55  TIRPFLPKKKKQKDSLINLEIQKENPKVVNEIDIEDLNRTNVCYCRCWRSKTFPVCDKSH 114

Query: 88  VKHNKATGDNVGPLLLKKQ 106
           +KHN+ TGDNVGPL+LKK+
Sbjct: 115 IKHNELTGDNVGPLILKKK 133

Regulator of autophagy that contributes to antagonize becn1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of bcl2 with becn1 and is required for bcl2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy.

Oncorhynchus mykiss (taxid: 8022)

>sp|C1C524|CISD2_LITCT CDGSH iron-sulfur domain-containing protein 2 OS=Lithobates catesbeiana GN=cisd2 PE=2 SV=1

 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 54/82 (65%)

Query: 25  GVVTARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCD 84
           G +  RP      + +   INL I+K   KVV+ + + +L     AYCRCWRS TFP+CD
Sbjct: 52  GYLAIRPFLPKKKQQKDSLINLKIQKENPKVVNEIDIEDLRIAKVAYCRCWRSKTFPVCD 111

Query: 85  GSHVKHNKATGDNVGPLLLKKQ 106
           GSH KHN+ TGDNVGPL+LKK+
Sbjct: 112 GSHNKHNELTGDNVGPLILKKK 133

Regulator of autophagy that contributes to antagonize becn1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of bcl2 with becn1 and is required for bcl2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy.

Lithobates catesbeiana (taxid: 8400)

>sp|Q8N5K1|CISD2_HUMAN CDGSH iron-sulfur domain-containing protein 2 OS=Homo sapiens GN=CISD2 PE=1 SV=1

 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 53/82 (64%)

Query: 25  GVVTARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCD 84
           G +  RP      + +   INL I+K   KVV+ + + +L     AYCRCWRS TFP CD
Sbjct: 52  GYLAVRPFLPKKKQQKDSLINLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACD 111

Query: 85  GSHVKHNKATGDNVGPLLLKKQ 106
           GSH KHN+ TGDNVGPL+LKK+
Sbjct: 112 GSHNKHNELTGDNVGPLILKKK 133

Regulator of autophagy that contributes to antagonize BECN1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of BCL2 with BECN1 and is required for BCL2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy. Contributes to BIK-initiated autophagy, while it is not involved in BIK-dependent activation of caspases. Involved in life span control, probably via its function as regulator of autophagy.

Homo sapiens (taxid: 9606)

>sp|Q05B71|CISD2_BOVIN CDGSH iron-sulfur domain-containing protein 2 OS=Bos taurus GN=CISD2 PE=2 SV=1

 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 53/82 (64%)

Query: 25  GVVTARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCD 84
           G +  RP      + +   INL I+K   KVV+ + + +L     AYCRCWRS TFP CD
Sbjct: 52  GYLAVRPFLPKKKQQKDSLINLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACD 111

Query: 85  GSHVKHNKATGDNVGPLLLKKQ 106
           GSH KHN+ TGDNVGPL+LKK+
Sbjct: 112 GSHNKHNELTGDNVGPLILKKK 133

Regulator of autophagy that contributes to antagonize BECN1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of BCL2 with BECN1 and is required for BCL2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy. Contributes to BIK-initiated autophagy, while it is not involved in BIK-dependent activation of caspases. Involved in life span control, probably via its function as regulator of autophagy.

Bos taurus (taxid: 9913)

>sp|Q9CQB5|CISD2_MOUSE CDGSH iron-sulfur domain-containing protein 2 OS=Mus musculus GN=Cisd2 PE=1 SV=1

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 53/82 (64%)

Query: 25  GVVTARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCD 84
           G +  RP      + +   INL I+K   KVV+ + + +L     AYCRCWRS TFP CD
Sbjct: 52  GYLAVRPFFPKKKQQKDSLINLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACD 111

Query: 85  GSHVKHNKATGDNVGPLLLKKQ 106
           GSH KHN+ TGDNVGPL+LKK+
Sbjct: 112 GSHNKHNELTGDNVGPLILKKK 133

Regulator of autophagy that contributes to antagonize BECN1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of BCL2 with BECN1 and is required for BCL2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy. Contributes to BIK-initiated autophagy, while it is not involved in BIK-dependent activation of caspases. Involved in life span control, probably via its function as regulator of autophagy.

Mus musculus (taxid: 10090)

>sp|B9EPI1|CID2A_SALSA CDGSH iron-sulfur domain-containing protein 2A OS=Salmo salar GN=cisd2a PE=2 SV=1

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 53/79 (67%)

Query: 28  TARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSH 87
           T RP      + +   INL I+K   KVV+ + + +L +    YCRCWRS TFP+CD SH
Sbjct: 55  TIRPFLPKKKKQKDSLINLKIQKENPKVVNEIDIEDLKRTNVCYCRCWRSKTFPVCDKSH 114

Query: 88  VKHNKATGDNVGPLLLKKQ 106
           +KHN+ TGDNVGPL+LKK+
Sbjct: 115 IKHNELTGDNVGPLILKKK 133

Regulator of autophagy that contributes to antagonize becn1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of bcl2 with becn1 and is required for bcl2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy.

Salmo salar (taxid: 8030)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	106
224134565	168	predicted protein [Populus trichocarpa]	1.0	0.630	0.706	7e-37
224122560	107	predicted protein [Populus trichocarpa]	0.867	0.859	0.768	8e-35
388516273	118	unknown [Lotus japonicus]	0.849	0.762	0.793	2e-34
356559911	113	PREDICTED: CDGSH iron-sulfur domain-cont	0.886	0.831	0.778	2e-33
255539659	111	conserved hypothetical protein [Ricinus	0.877	0.837	0.742	3e-33
351721621	113	uncharacterized protein LOC100306446 [Gl	0.905	0.849	0.762	5e-33
18423312	108	Iron-binding zinc finger CDGSH type doma	0.811	0.796	0.770	1e-30
297792477	109	hypothetical protein ARALYDRAFT_495239 [	0.801	0.779	0.770	2e-30
388325588	83	Chain A, The Crystal Structure Of At5g51	0.726	0.927	0.820	6e-29
21554884	108	unknown [Arabidopsis thaliana]	0.801	0.787	0.755	2e-28

>gi|224134565|ref|XP_002321854.1| predicted protein [Populus trichocarpa] gi|222868850|gb|EEF05981.1| predicted protein [Populus trichocarpa]

 Score =  157 bits (397), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 77/109 (70%), Positives = 83/109 (76%), Gaps = 3/109 (2%)

Query: 1   MASIAMSCSAAVPGFRFNKSPMAA---GVVTARPRRVVVVRAEGQGINLDIRKTEEKVVD 57
           M+    S S A   FR++KS        +   RPR +VVVRAE Q IN +IRK EEKVVD
Sbjct: 58  MSMTVASTSTASASFRYSKSRTGGVKPNIAAVRPRSLVVVRAEAQSINPEIRKNEEKVVD 117

Query: 58  SVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 106
           SVVV ELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
Sbjct: 118 SVVVAELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 166

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122560|ref|XP_002318867.1| predicted protein [Populus trichocarpa] gi|222859540|gb|EEE97087.1| predicted protein [Populus trichocarpa]

 Score =  150 bits (379), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 73/95 (76%), Positives = 80/95 (84%), Gaps = 3/95 (3%)

Query: 15  FRFNKSPMAA---GVVTARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAY 71
           F ++KS +      +  ARPR +VVVRAE Q IN +IRKTEEKVVDSV+V ELSKPLTAY
Sbjct: 11  FCYSKSRIGGVKPNIAAARPRSLVVVRAEAQAINPEIRKTEEKVVDSVMVAELSKPLTAY 70

Query: 72  CRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 106
           CRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
Sbjct: 71  CRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 105

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516273|gb|AFK46198.1| unknown [Lotus japonicus]

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/92 (79%), Positives = 79/92 (85%), Gaps = 2/92 (2%)

Query: 16  RFNKSPMAAGVVTARPRRVVVVRAE--GQGINLDIRKTEEKVVDSVVVTELSKPLTAYCR 73
            FN S  + GV   +PRRVV+V+AE  G GIN DIRKTE KVVDSVV+TEL+KPLTAYCR
Sbjct: 27  HFNPSSFSGGVDCRKPRRVVLVKAEAEGVGINPDIRKTEAKVVDSVVITELAKPLTAYCR 86

Query: 74  CWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 105
           CWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 87  CWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 118

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559911|ref|XP_003548239.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 2-like [Glycine max]

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/95 (77%), Positives = 77/95 (81%), Gaps = 1/95 (1%)

Query: 11  AVPGFRFNKSPMAAGVVTARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTA 70
            V G  F  S    GV   RPRRVV+V+AE   IN DIRK+EEKVVDSVVVTELSKPLT 
Sbjct: 20  GVLGTHFKASSFV-GVDGGRPRRVVLVKAEAVSINPDIRKSEEKVVDSVVVTELSKPLTP 78

Query: 71  YCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 105
           YCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 79  YCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 113

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539659|ref|XP_002510894.1| conserved hypothetical protein [Ricinus communis] gi|223550009|gb|EEF51496.1| conserved hypothetical protein [Ricinus communis]

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/97 (74%), Positives = 79/97 (81%), Gaps = 4/97 (4%)

Query: 14  GFRFNKSPMAAGVVT----ARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLT 69
           GF ++KS +     T    A+PRR++ VRAE QGIN  IRK EEKVVDSV+V ELSKPLT
Sbjct: 13  GFCYSKSRVEGFKPTTHAAAKPRRMIAVRAEAQGINPAIRKDEEKVVDSVMVAELSKPLT 72

Query: 70  AYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 106
            YCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
Sbjct: 73  PYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 109

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721621|ref|NP_001235168.1| uncharacterized protein LOC100306446 [Glycine max] gi|255628565|gb|ACU14627.1| unknown [Glycine max]

 Score =  144 bits (364), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 74/97 (76%), Positives = 77/97 (79%), Gaps = 1/97 (1%)

Query: 9   SAAVPGFRFNKSPMAAGVVTARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPL 68
           S  V G  F  S    GV   R RRVV+V+AE   IN DIRK+EEKVVDSVVVTELSKPL
Sbjct: 18  STGVLGTHFKASSFV-GVGGVRTRRVVLVKAEAVSINPDIRKSEEKVVDSVVVTELSKPL 76

Query: 69  TAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 105
           T YCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 77  TPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 113

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18423312|ref|NP_568764.1| Iron-binding zinc finger CDGSH type domain-containing protein [Arabidopsis thaliana] gi|13926265|gb|AAK49604.1|AF372888_1 AT5g51720/MIO24_14 [Arabidopsis thaliana] gi|10177871|dbj|BAB11241.1| unnamed protein product [Arabidopsis thaliana] gi|16323224|gb|AAL15346.1| AT5g51720/MIO24_14 [Arabidopsis thaliana] gi|332008736|gb|AED96119.1| Iron-binding zinc finger CDGSH type domain-containing protein [Arabidopsis thaliana]

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/87 (77%), Positives = 74/87 (85%), Gaps = 1/87 (1%)

Query: 21  PMAAGVVTARPRRVVVVRAEGQG-INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGT 79
           P+  G V  + +R+VVVRAEG G IN +IRK E+KVVDSVVVTELSK +T YCRCWRSGT
Sbjct: 22  PVTGGEVGRKQQRMVVVRAEGGGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGT 81

Query: 80  FPLCDGSHVKHNKATGDNVGPLLLKKQ 106
           FPLCDGSHVKHNKA GDNVGPLLLKKQ
Sbjct: 82  FPLCDGSHVKHNKANGDNVGPLLLKKQ 108

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792477|ref|XP_002864123.1| hypothetical protein ARALYDRAFT_495239 [Arabidopsis lyrata subsp. lyrata] gi|297309958|gb|EFH40382.1| hypothetical protein ARALYDRAFT_495239 [Arabidopsis lyrata subsp. lyrata]

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/87 (77%), Positives = 74/87 (85%), Gaps = 2/87 (2%)

Query: 22  MAAGVVTARPRRVVVVRAEGQG--INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGT 79
           + AG +  + +R+VVVRAEG G  IN +IRK EEKVVDSVVVTELSK +T YCRCWRSGT
Sbjct: 23  VTAGEMGQKQQRMVVVRAEGGGGGINPEIRKNEEKVVDSVVVTELSKNITPYCRCWRSGT 82

Query: 80  FPLCDGSHVKHNKATGDNVGPLLLKKQ 106
           FPLCDGSHVKHNKA GDNVGPLLLKKQ
Sbjct: 83  FPLCDGSHVKHNKANGDNVGPLLLKKQ 109

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388325588|pdb|3S2Q|A Chain A, The Crystal Structure Of At5g51720 (At-Neet) gi|388325589|pdb|3S2Q|B Chain B, The Crystal Structure Of At5g51720 (At-Neet)

 Score =  131 bits (329), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/78 (82%), Positives = 70/78 (89%), Gaps = 1/78 (1%)

Query: 30  RPRRVVVVRAEGQG-INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHV 88
           + +R+VVVRAEG G IN +IRK E+KVVDSVVVTELSK +T YCRCWRSGTFPLCDGSHV
Sbjct: 6   KQQRMVVVRAEGGGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHV 65

Query: 89  KHNKATGDNVGPLLLKKQ 106
           KHNKA GDNVGPLLLKKQ
Sbjct: 66  KHNKANGDNVGPLLLKKQ 83

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21554884|gb|AAM63719.1| unknown [Arabidopsis thaliana]

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 72/86 (83%), Gaps = 1/86 (1%)

Query: 21  PMAAGVVTARPRRVVVVRAEGQG-INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGT 79
           P+  G V  + +R+VVVRAEG G IN +IRK E+KVVDSVVVTELSK +T YCRC RSGT
Sbjct: 22  PVTGGEVGRKQQRMVVVRAEGGGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCRRSGT 81

Query: 80  FPLCDGSHVKHNKATGDNVGPLLLKK 105
           FPLCDGSHVKHNKA GDNVGPLLLKK
Sbjct: 82  FPLCDGSHVKHNKANGDNVGPLLLKK 107

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	106
TAIR|locus:2165336	108	NEET "NEET group protein" [Ara	0.622	0.611	0.863	2.2e-27
UNIPROTKB|C1BI29	135	cisd2a "CDGSH iron-sulfur doma	0.594	0.466	0.587	3.6e-18
ZFIN|ZDB-GENE-040426-1381	135	cisd2 "CDGSH iron sulfur domai	0.594	0.466	0.603	3.6e-18
UNIPROTKB|Q5I027	135	cisd2 "CDGSH iron-sulfur domai	0.594	0.466	0.619	5.8e-18
UNIPROTKB|Q6AZG1	135	cisd2-b "CDGSH iron-sulfur dom	0.594	0.466	0.619	5.8e-18
UNIPROTKB|Q6PCF8	135	cisd2-a "CDGSH iron-sulfur dom	0.594	0.466	0.619	5.8e-18
UNIPROTKB|C1C524	135	cisd2 "CDGSH iron-sulfur domai	0.594	0.466	0.619	7.5e-18
UNIPROTKB|Q05B71	135	CISD2 "CDGSH iron-sulfur domai	0.594	0.466	0.619	9.5e-18
UNIPROTKB|E2R702	135	CISD2 "Uncharacterized protein	0.594	0.466	0.619	9.5e-18
UNIPROTKB|D6RCF4	145	CISD2 "CDGSH iron-sulfur domai	0.594	0.434	0.619	9.5e-18

TAIR|locus:2165336 NEET "NEET group protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 57/66 (86%), Positives = 60/66 (90%)

Query:    41 GQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGP 100
             G GIN +IRK E+KVVDSVVVTELSK +T YCRCWRSGTFPLCDGSHVKHNKA GDNVGP
Sbjct:    43 GGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHVKHNKANGDNVGP 102

Query:   101 LLLKKQ 106
             LLLKKQ
Sbjct:   103 LLLKKQ 108

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0010150 "leaf senescence" evidence=IMP

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IPI

GO:0055072 "iron ion homeostasis" evidence=IMP

GO:0072593 "reactive oxygen species metabolic process" evidence=IMP

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

UNIPROTKB|C1BI29 cisd2a "CDGSH iron-sulfur domain-containing protein 2A" [Oncorhynchus mykiss (taxid:8022)]

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 37/63 (58%), Positives = 50/63 (79%)

Query:    44 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
             INL+I+K   KVV+ + + +L++    YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+L
Sbjct:    71 INLEIQKENPKVVNEIDIEDLNRTNVCYCRCWRSKTFPVCDKSHIKHNELTGDNVGPLIL 130

Query:   104 KKQ 106
             KK+
Sbjct:   131 KKK 133

GO:0000422 "mitochondrion degradation" evidence=ISS

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0010259 "multicellular organismal aging" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS

ZFIN|ZDB-GENE-040426-1381 cisd2 "CDGSH iron sulfur domain 2" [Danio rerio (taxid:7955)]

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 38/63 (60%), Positives = 48/63 (76%)

Query:    44 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
             INL I+K   KVV+ + + +L  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+L
Sbjct:    71 INLKIQKENPKVVNEIDIEDLRTPNVCYCRCWRSKTFPVCDKSHIKHNELTGDNVGPLIL 130

Query:   104 KKQ 106
             KK+
Sbjct:   131 KKK 133

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA;ISS

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0000422 "mitochondrion degradation" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0005741 "mitochondrial outer membrane" evidence=IEA;ISS

GO:0010259 "multicellular organismal aging" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006914 "autophagy" evidence=IEA

GO:0051536 "iron-sulfur cluster binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5I027 cisd2 "CDGSH iron-sulfur domain-containing protein 2" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 39/63 (61%), Positives = 48/63 (76%)

Query:    44 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
             INL I+K   KVV+ + + +L     AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+L
Sbjct:    71 INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 130

Query:   104 KKQ 106
             KK+
Sbjct:   131 KKK 133

GO:0000422 "mitochondrion degradation" evidence=ISS

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0010259 "multicellular organismal aging" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS

UNIPROTKB|Q6AZG1 cisd2-b "CDGSH iron-sulfur domain-containing protein 2B" [Xenopus laevis (taxid:8355)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 39/63 (61%), Positives = 48/63 (76%)

Query:    44 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
             INL I+K   KVV+ + + +L     AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+L
Sbjct:    71 INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 130

Query:   104 KKQ 106
             KK+
Sbjct:   131 KKK 133

GO:0000422 "mitochondrion degradation" evidence=ISS

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0010259 "multicellular organismal aging" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS

UNIPROTKB|Q6PCF8 cisd2-a "CDGSH iron-sulfur domain-containing protein 2A" [Xenopus laevis (taxid:8355)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 39/63 (61%), Positives = 48/63 (76%)

Query:    44 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
             INL I+K   KVV+ + + +L     AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+L
Sbjct:    71 INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 130

Query:   104 KKQ 106
             KK+
Sbjct:   131 KKK 133

GO:0000422 "mitochondrion degradation" evidence=ISS

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0010259 "multicellular organismal aging" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS

UNIPROTKB|C1C524 cisd2 "CDGSH iron-sulfur domain-containing protein 2" [Rana catesbeiana (taxid:8400)]

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 39/63 (61%), Positives = 48/63 (76%)

Query:    44 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
             INL I+K   KVV+ + + +L     AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+L
Sbjct:    71 INLKIQKENPKVVNEIDIEDLRIAKVAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 130

Query:   104 KKQ 106
             KK+
Sbjct:   131 KKK 133

GO:0000422 "mitochondrion degradation" evidence=ISS

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0010259 "multicellular organismal aging" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS

UNIPROTKB|Q05B71 CISD2 "CDGSH iron-sulfur domain-containing protein 2" [Bos taurus (taxid:9913)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 39/63 (61%), Positives = 47/63 (74%)

Query:    44 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
             INL I+K   KVV+ + + +L     AYCRCWRS TFP CDGSH KHN+ TGDNVGPL+L
Sbjct:    71 INLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLIL 130

Query:   104 KKQ 106
             KK+
Sbjct:   131 KKK 133

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0010259 "multicellular organismal aging" evidence=ISS

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0000422 "mitochondrion degradation" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0043234 "protein complex" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2R702 CISD2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 39/63 (61%), Positives = 47/63 (74%)

Query:    44 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
             INL I+K   KVV+ + + +L     AYCRCWRS TFP CDGSH KHN+ TGDNVGPL+L
Sbjct:    71 INLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLIL 130

Query:   104 KKQ 106
             KK+
Sbjct:   131 KKK 133

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0010506 "regulation of autophagy" evidence=IEA

GO:0010259 "multicellular organismal aging" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0000422 "mitochondrion degradation" evidence=IEA

UNIPROTKB|D6RCF4 CISD2 "CDGSH iron-sulfur domain-containing protein 2" [Homo sapiens (taxid:9606)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 39/63 (61%), Positives = 47/63 (74%)

Query:    44 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
             INL I+K   KVV+ + + +L     AYCRCWRS TFP CDGSH KHN+ TGDNVGPL+L
Sbjct:    81 INLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLIL 140

Query:   104 KKQ 106
             KK+
Sbjct:   141 KKK 143

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5I027	CISD2_XENTR	No assigned EC number	0.5121	0.7735	0.6074	yes	no
Q8N5K1	CISD2_HUMAN	No assigned EC number	0.5121	0.7735	0.6074	yes	no
Q9CQB5	CISD2_MOUSE	No assigned EC number	0.5121	0.7735	0.6074	yes	no
Q05B71	CISD2_BOVIN	No assigned EC number	0.5121	0.7735	0.6074	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_XV1035 hypothetical protein (169 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	106
smart00704	38	smart00704, ZnF_CDGSH, CDGSH-type zinc finger	4e-10
pfam09360	34	pfam09360, zf-CDGSH, Iron-binding zinc finger CDGS	1e-08

>gnl|CDD|197836 smart00704, ZnF_CDGSH, CDGSH-type zinc finger

 Score = 50.4 bits (121), Expect = 4e-10
 Identities = 16/24 (66%), Positives = 17/24 (70%)

Query: 69 TAYCRCWRSGTFPLCDGSHVKHNK 92
           A CRC RS  FP CDGSH KHN+
Sbjct: 14 YALCRCGRSKNFPYCDGSHKKHNE 37

Function unknown. Length = 38

>gnl|CDD|220203 pfam09360, zf-CDGSH, Iron-binding zinc finger CDGSH type

 Score = 46.4 bits (111), Expect = 1e-08
 Identities = 15/25 (60%), Positives = 15/25 (60%)

Query: 63 ELSKPLTAYCRCWRSGTFPLCDGSH 87
          EL K   A CRC RS   P CDGSH
Sbjct: 9  ELEKKTYALCRCGRSKNQPFCDGSH 33

The CDGSH-type zinc finger domain binds iron rather than zinc as a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family. The domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by a more N-terminal domain found in higher vertebrates, MitoNEET_N, pfam10660. The domain forms a uniquely folded homo-dimer and spans the outer mitochondrial membrane, orienting the iron-binding residues towards the cytoplasm. Length = 34

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	106
KOG3461	132	consensus CDGSH-type Zn-finger containing protein	99.93
COG3369	78	Zinc finger domain containing protein (CDGSH-type)	99.65
smart00704	38	ZnF_CDGSH CDGSH-type zinc finger. Function unknown	99.63
PF09360	38	zf-CDGSH: Iron-binding zinc finger CDGSH type; Int	99.57
KOG4605	129	consensus Uncharacterized conserved protein contai	99.27
KOG4605	129	consensus Uncharacterized conserved protein contai	98.3

>KOG3461 consensus CDGSH-type Zn-finger containing protein [General function prediction only]

Probab=99.93  E-value=1.5e-26  Score=168.26  Aligned_cols=65  Identities=60%  Similarity=1.089  Sum_probs=61.2

Q ss_pred             cccccceEeCCCCeeEeceeeeecCCCeEEEEEecccCCCccCccccccCcccCCCccCceeeeeC
Q 033992           41 GQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ  106 (106)
Q Consensus        41 P~~~n~~I~~~~~kvVd~~~~~~~~~~~~~lCrCg~S~~~PfCDgsH~~~~~~~g~~~~p~~~~~~  106 (106)
                      -.++|.+|++++.|+||.+++|++++ +.+|||||+|+++|||||||.++|.++|||||||+++||
T Consensus        66 ~a~iN~hIqkd~pKIVd~~d~eDl~~-ka~yCrCWrs~kfP~CDGsh~KhNk~tgdNvgpliikk~  130 (132)
T KOG3461|consen   66 KARINLHIQKDNPKIVDAFDMEDLGD-KAAYCRCWRSKKFPLCDGSHGKHNKETGDNVGPLIIKKK  130 (132)
T ss_pred             CccccceeecCCCceeEEEehhhhcc-cceEEEeeccCCcccccCcccccccccccccccceeeec
Confidence            46999999999999999999999985 556999999999999999999999999999999999986

>COG3369 Zinc finger domain containing protein (CDGSH-type) [Function unknown]

Probab=99.65  E-value=9.8e-17  Score=108.45  Aligned_cols=28  Identities=39%  Similarity=0.740  Sum_probs=26.2

Q ss_pred             CCeEEEEEecccCCCccCccccccCccc
Q 033992           66 KPLTAYCRCWRSGTFPLCDGSHVKHNKA   93 (106)
Q Consensus        66 ~~~~~lCrCg~S~~~PfCDgsH~~~~~~   93 (106)
                      +.+++|||||.|.|||||||+|.+++|+
T Consensus        28 ~~~~~LCrCG~S~NKPfCDGtH~k~gf~   55 (78)
T COG3369          28 DEQAALCRCGHSENKPFCDGTHKKTGFD   55 (78)
T ss_pred             ceEEEEEeccCcCCCCccCCcccccccc
Confidence            4689999999999999999999999995

>smart00704 ZnF_CDGSH CDGSH-type zinc finger

Probab=99.63  E-value=2.6e-16  Score=93.54  Aligned_cols=29  Identities=55%  Similarity=1.017  Sum_probs=25.7

Q ss_pred             CCCeEEEEEecccCCCccCccccccCccc
Q 033992           65 SKPLTAYCRCWRSGTFPLCDGSHVKHNKA   93 (106)
Q Consensus        65 ~~~~~~lCrCg~S~~~PfCDgsH~~~~~~   93 (106)
                      +...++||+||+|+|+|||||||...+++
T Consensus        10 ~~~~~~lC~C~~S~~~PfCDGsH~~~~~~   38 (38)
T smart00704       10 KREKYALCRCGRSKNFPYCDGSHKKHNEQ   38 (38)
T ss_pred             CCCEEEEeeCCCCCCCCccCCcccCcCcC
Confidence            34689999999999999999999988763

Function unknown.

>PF09360 zf-CDGSH: Iron-binding zinc finger CDGSH type; InterPro: IPR018967 This entry represents iron-sulphur domain containing proteins that have a CDGSH sequence motif (although the Ser residue can also be an Ala or Thr), and is found in proteins from a wide range of organisms with the exception of fungi

Probab=99.57  E-value=4.8e-16  Score=92.19  Aligned_cols=25  Identities=52%  Similarity=0.914  Sum_probs=17.4

Q ss_pred             cCCCeEEEEEecccCCCccCccccc
Q 033992           64 LSKPLTAYCRCWRSGTFPLCDGSHV   88 (106)
Q Consensus        64 ~~~~~~~lCrCg~S~~~PfCDgsH~   88 (106)
                      +++..++|||||+|+|+|||||||+
T Consensus        14 ~~~~~~~lC~Cg~S~~~PfCDGsH~   38 (38)
T PF09360_consen   14 LEKGTYALCRCGKSKNKPFCDGSHK   38 (38)
T ss_dssp             CSTSEEEE-SSS--TTTTB--SHHH
T ss_pred             ecCCEEEEecCCCCCCCCccCCcCC
Confidence            3457899999999999999999995

The CDGSH-type domain binds a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family []. CDGSH-type domains are found in mitoNEET, an iron-containing integral protein of the outer mitochondrian membrane (OMM). MitoNEET forms a dimeric structure with a NEET fold, and contains two domains: a beta-cap region and a cluster-binding domain that coordinated two acid-labile 2Fe-2S clusters (one bound to each protomer) []. The CDGSH iron-sulphur domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by a more N-terminal domain found in higher vertebrates, (IPR019610 from INTERPRO) [, ]. The whole protein regulates oxidative capacity and may function in electron transfer, for instance in redox reactions with metabolic intermediates, cofactors and/or proteins localized at the OMM. ; GO: 0051537 2 iron, 2 sulfur cluster binding, 0043231 intracellular membrane-bounded organelle; PDB: 3TBO_A 3FNV_B 3TBM_B 3TBN_A 3S2R_A 3S2Q_A 3LPQ_A 2QH7_A 3EW0_A 2R13_A ....

>KOG4605 consensus Uncharacterized conserved protein containing CDGSH-type Zn-finger [Function unknown]

Probab=99.27  E-value=7.6e-12  Score=91.10  Aligned_cols=59  Identities=24%  Similarity=0.380  Sum_probs=44.4

Q ss_pred             cccceEeCCCCeeEec--eeeeecCCCeEEEEEecccCCCccCccccccCcccCCCccCceeee
Q 033992           43 GINLDIRKTEEKVVDS--VVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLK  104 (106)
Q Consensus        43 ~~n~~I~~~~~kvVd~--~~~~~~~~~~~~lCrCg~S~~~PfCDgsH~~~~~~~g~~~~p~~~~  104 (106)
                      ..........+++.+.  +.++....+.|.||-||+|+.+|||||||+..+   -.++.||-++
T Consensus        30 ~~ta~~lp~~g~v~~k~p~KVhL~a~KtY~WCsCG~S~sQPfCDGsHk~~~---~tklrPvrFk   90 (129)
T KOG4605|consen   30 AQTAPRLPARGVVALKTPIKVHLVAGKTYRWCSCGRSKSQPFCDGSHKFQG---RTKLRPVRFK   90 (129)
T ss_pred             cccccccccCceecccCceEEEEecCCEEEEEeccccCCCccccccccccc---cccccceEeE
Confidence            4444555666666653  355666678999999999999999999999765   4568888775

>KOG4605 consensus Uncharacterized conserved protein containing CDGSH-type Zn-finger [Function unknown]

Probab=98.30  E-value=5.4e-07  Score=65.87  Aligned_cols=39  Identities=21%  Similarity=0.417  Sum_probs=30.0

Q ss_pred             eceeeeecCCCeEEEEEecccCCCccCccccccCcccCC
Q 033992           57 DSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATG   95 (106)
Q Consensus        57 d~~~~~~~~~~~~~lCrCg~S~~~PfCDgsH~~~~~~~g   95 (106)
                      .++.+...+...|+||.|.++.+.|||||.|+....+.-
T Consensus        85 rPvrFkvektg~~wlCnCKqT~~rP~CDGtH~~~~~q~a  123 (129)
T KOG4605|consen   85 RPVRFKVEKTGMVWLCNCKQTQRRPYCDGTHRSERVQKA  123 (129)
T ss_pred             cceEeEecccceEEeecccccCCCCccCCcccccccchh
Confidence            334454444568999999999999999999997765543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	106
3s2q_A	83	The Crystal Structure Of At5g51720 (At-Neet) Length		7e-29
3s2r_A	83	Atchloroneet (H87c Mutant) Length = 83		2e-27
3fnv_A	83	Crystal Structure Of Miner1: The Redox-Active 2fe-2		6e-19
4ezf_A	77	The Crystal Structure Of A Human Mitoneet Mutant Wi		9e-17
4f2c_A	76	The Crystal Structure Of A Human Mitoneet Double Mu		8e-16
2qd0_A	81	Crystal Structure Of Mitoneet Length = 81		1e-15
2r13_A	79	Crystal Structure Of Human Mitoneet Reveals A Novel		1e-15
3ew0_A	80	The Novel 2fe-2s Outer Mitochondrial Protein Mitone		1e-15
2qh7_A	76	Mitoneet Is A Uniquely Folded 2fe-2s Outer Mitochon		1e-15
3ree_A	84	Crystal Structure Of Mitoneet Length = 84		1e-15
4f1e_A	76	The Crystal Structure Of A Human Mitoneet Mutant Wi		2e-15
4f28_A	76	The Crystal Structure Of A Human Mitoneet Mutant Wi		4e-15
3lpq_A	79	Human Mitoneet With 2fe-2s Coordinating Ligand His		4e-14

>pdb|3S2Q|A Chain A, The Crystal Structure Of At5g51720 (At-Neet) Length = 83

Iteration: 1
 Score =  122 bits (305), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 57/66 (86%), Positives = 60/66 (90%)
Query: 41  GQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGP 100
           G GIN +IRK E+KVVDSVVVTELSK +T YCRCWRSGTFPLCDGSHVKHNKA GDNVGP
Sbjct: 18  GGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHVKHNKANGDNVGP 77
Query: 101 LLLKKQ 106
           LLLKKQ
Sbjct: 78  LLLKKQ 83

>pdb|3S2R|A Chain A, Atchloroneet (H87c Mutant) Length = 83

Iteration: 1
 Score =  117 bits (292), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/66 (84%), Positives = 59/66 (89%)
Query: 41  GQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGP 100
           G GIN +IRK E+KVVDSVVVTELSK +T YCRCWRSGTFPLCDGS VKHNKA GDNVGP
Sbjct: 18  GGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSCVKHNKANGDNVGP 77
Query: 101 LLLKKQ 106
           LLLKKQ
Sbjct: 78  LLLKKQ 83

>pdb|3FNV|A Chain A, Crystal Structure Of Miner1: The Redox-Active 2fe-2s Protein Causative In Wolfram Syndrome 2 Length = 83

Iteration: 1
 Score = 89.0 bits (219), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 40/63 (63%), Positives = 48/63 (76%)
Query: 44  INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
           INL I+K   KVV+ + + +LS    AYCRCWRS TFP CDGSH KHN+ TGDNVGPL+L
Sbjct: 19  INLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLIL 78
Query: 104 KKQ 106
           KK+
Sbjct: 79  KKK 81

>pdb|4EZF|A Chain A, The Crystal Structure Of A Human Mitoneet Mutant With An Ala Inserted Between Asp 67 And Lys 68 Length = 77

Iteration: 1
 Score = 81.6 bits (200), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 44  INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
           INL I+K   K+V +  + +L      YCRCWRS  FP CDG+H KHN+ TGDNVGPL++
Sbjct: 13  INLHIQKDNPKIVHAFDMEDLGDAKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLII 72
Query: 104 KKQ 106
           KK+
Sbjct: 73  KKK 75

>pdb|4F2C|A Chain A, The Crystal Structure Of A Human Mitoneet Double Mutant In Which Gly 66 Are Asp 67 Are Both Replaced With Ala Residues Length = 76

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 44  INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
           INL I+K   K+V +  + +L+     YCRCWRS  FP CDG+H KHN+ TGDNVGPL++
Sbjct: 13  INLHIQKDNPKIVHAFDMEDLAAK-AVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLII 71
Query: 104 KKQ 106
           KK+
Sbjct: 72  KKK 74

>pdb|2QD0|A Chain A, Crystal Structure Of Mitoneet Length = 81

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 44  INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
           INL I+K   K+V +  + +L      YCRCWRS  FP CDG+H KHN+ TGDNVGPL++
Sbjct: 16  INLHIQKDNPKIVHAFDMEDLGDK-AVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLII 74
Query: 104 KKQ 106
           KK+
Sbjct: 75  KKK 77

>pdb|2R13|A Chain A, Crystal Structure Of Human Mitoneet Reveals A Novel [2fe- 2s] Cluster Coordination Length = 79

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 44  INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
           INL I+K   K+V +  + +L      YCRCWRS  FP CDG+H KHN+ TGDNVGPL++
Sbjct: 16  INLHIQKDNPKIVHAFDMEDLGDK-AVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLII 74
Query: 104 KKQ 106
           KK+
Sbjct: 75  KKK 77

>pdb|3EW0|A Chain A, The Novel 2fe-2s Outer Mitochondrial Protein Mitoneet Displays Conformational Flexibility In Its N-Terminal Cytoplasmic Tethering Domain Length = 80

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 44  INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
           INL I+K   K+V +  + +L      YCRCWRS  FP CDG+H KHN+ TGDNVGPL++
Sbjct: 17  INLHIQKDNPKIVHAFDMEDLGDK-AVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLII 75
Query: 104 KKQ 106
           KK+
Sbjct: 76  KKK 78

>pdb|2QH7|A Chain A, Mitoneet Is A Uniquely Folded 2fe-2s Outer Mitochondrial Membrane Protein Stabilized By Pioglitazone Length = 76

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 44  INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
           INL I+K   K+V +  + +L      YCRCWRS  FP CDG+H KHN+ TGDNVGPL++
Sbjct: 13  INLHIQKDNPKIVHAFDMEDLGDK-AVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLII 71
Query: 104 KKQ 106
           KK+
Sbjct: 72  KKK 74

>pdb|3REE|A Chain A, Crystal Structure Of Mitoneet Length = 84

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 44  INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
           INL I+K   K+V +  + +L      YCRCWRS  FP CDG+H KHN+ TGDNVGPL++
Sbjct: 14  INLHIQKDNPKIVHAFDMEDLGDK-AVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLII 72
Query: 104 KKQ 106
           KK+
Sbjct: 73  KKK 75

>pdb|4F1E|A Chain A, The Crystal Structure Of A Human Mitoneet Mutant With Asp 67 Replaced By A Gly Length = 76

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 44  INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
           INL I+K   K+V +  + +L      YCRCWRS  FP CDG+H KHN+ TGDNVGPL++
Sbjct: 13  INLHIQKDNPKIVHAFDMEDLGGK-AVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLII 71
Query: 104 KKQ 106
           KK+
Sbjct: 72  KKK 74

>pdb|4F28|A Chain A, The Crystal Structure Of A Human Mitoneet Mutant With Met 62 Replaced By A Gly Length = 76

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 44  INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
           INL I+K   K+V +    +L      YCRCWRS  FP CDG+H KHN+ TGDNVGPL++
Sbjct: 13  INLHIQKDNPKIVHAFDGEDLGDK-AVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLII 71
Query: 104 KKQ 106
           KK+
Sbjct: 72  KKK 74

>pdb|3LPQ|A Chain A, Human Mitoneet With 2fe-2s Coordinating Ligand His 87 Replaced With Cys Length = 79

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 44  INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 103
           INL I+K   K+V +  + +L      YCRCWRS  FP CDG+  KHN+ TGDNVGPL++
Sbjct: 17  INLHIQKDNPKIVHAFDMEDLGDK-AVYCRCWRSKKFPFCDGACTKHNEETGDNVGPLII 75
Query: 104 KKQ 106
           KK+
Sbjct: 76  KKK 78

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	106
3s2r_A	83	AT5G51720/MIO24_14; redox, Fe-S cluster, metal bin	1e-32
3fnv_A	83	CDGSH iron sulfur domain-containing protein 2; dia	5e-30
3ew0_A	80	Mitoneet, CDGSH iron sulfur domain-containing prot	3e-27
3tbm_A	69	Putative uncharacterized protein; iron-sulfur, CDG	2e-06
3tbo_A	60	Zinc finger, CDGSH-type domain protein; iron-sulfu	2e-05

>3s2r_A AT5G51720/MIO24_14; redox, Fe-S cluster, metal binding protein; 1.14A {Arabidopsis thaliana} PDB: 3s2q_A Length = 83

 Score =  108 bits (270), Expect = 1e-32
 Identities = 64/83 (77%), Positives = 70/83 (84%), Gaps = 1/83 (1%)

Query: 25  GVVTARPRRVVVVRAEGQG-INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLC 83
           G    + +R+VVVRAEG G IN +IRK E+KVVDSVVVTELSK +T YCRCWRSGTFPLC
Sbjct: 1   GSHMRKQQRMVVVRAEGGGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLC 60

Query: 84  DGSHVKHNKATGDNVGPLLLKKQ 106
           DGS VKHNKA GDNVGPLLLKKQ
Sbjct: 61  DGSCVKHNKANGDNVGPLLLKKQ 83

>3fnv_A CDGSH iron sulfur domain-containing protein 2; diabetes, membrane bound, thiazolidinedione, oxidative stres endoplasmic reticulum, membrane; 2.10A {Homo sapiens} Length = 83

 Score =  101 bits (253), Expect = 5e-30
 Identities = 42/78 (53%), Positives = 52/78 (66%)

Query: 29  ARPRRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHV 88
            RP      + +   INL I+K   KVV+ + + +LS    AYCRCWRS TFP CDGSH 
Sbjct: 4   MRPFLPKKKQQKDSLINLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPACDGSHN 63

Query: 89  KHNKATGDNVGPLLLKKQ 106
           KHN+ TGDNVGPL+LKK+
Sbjct: 64  KHNELTGDNVGPLILKKK 81

>3ew0_A Mitoneet, CDGSH iron sulfur domain-containing protein 1; mitochondrial outer membrane, 2Fe-2S proteins, isotopic LABE highyield expression; 1.40A {Homo sapiens} PDB: 2r13_A 2qd0_A 3ree_A 2qh7_A 3lpq_A Length = 80

 Score = 94.4 bits (234), Expect = 3e-27
 Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 1/69 (1%)

Query: 38  RAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDN 97
                 INL I+K   K+V +  + +L      YCRCWRS  FP CDG+H KHN+ TGDN
Sbjct: 11  HRNKAMINLHIQKDNPKIVHAFDMEDLGDK-AVYCRCWRSKKFPFCDGAHTKHNEETGDN 69

Query: 98  VGPLLLKKQ 106
           VGPL++KK+
Sbjct: 70  VGPLIIKKK 78

>3tbm_A Putative uncharacterized protein; iron-sulfur, CDGSH, metal binding protein; HET: 2PE TLA; 1.80A {Ralstonia solanacearum} Length = 69

 Score = 41.4 bits (97), Expect = 2e-06
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 61 VTELSKPLTAYCRCWRSGTFPLCDGSHVK 89
             + +     CRC  S   P CDGSH +
Sbjct: 33 ELPVEQGQAWLCRCGHSLNKPFCDGSHKR 61

>3tbo_A Zinc finger, CDGSH-type domain protein; iron-sulfur, metal binding protein; 1.50A {Pyrobaculum calidifontis} Length = 60

 Score = 38.4 bits (89), Expect = 2e-05
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 57 DSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVK 89
          +     ++       CRC  SG+ P CDG+H K
Sbjct: 10 NGPYEVKIGGRAIYLCRCGHSGSKPHCDGTHAK 42

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	106
3s2r_A	83	AT5G51720/MIO24_14; redox, Fe-S cluster, metal bin	99.95
3fnv_A	83	CDGSH iron sulfur domain-containing protein 2; dia	99.93
4ezf_A	77	Mitoneet, CDGSH iron-sulfur domain-containing prot	99.93
3ew0_A	80	Mitoneet, CDGSH iron sulfur domain-containing prot	99.88
3tbm_A	69	Putative uncharacterized protein; iron-sulfur, CDG	99.83
3tbo_A	60	Zinc finger, CDGSH-type domain protein; iron-sulfu	99.69
3tbn_A	87	Putative uncharacterized protein; CDGSH, iron-sulf	99.38
3tbn_A	87	Putative uncharacterized protein; CDGSH, iron-sulf	99.0

>3s2r_A AT5G51720/MIO24_14; redox, Fe-S cluster, metal binding protein; 1.14A {Arabidopsis thaliana} PDB: 3s2q_A

Probab=99.95  E-value=2.3e-30  Score=175.18  Aligned_cols=77  Identities=82%  Similarity=1.305  Sum_probs=62.6

Q ss_pred             CCceEEEecCCc-ccccceEeCCCCeeEeceeeeecCCCeEEEEEecccCCCccCccccccCcccCCCccCceeeeeC
Q 033992           30 RPRRVVVVRAEG-QGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ  106 (106)
Q Consensus        30 ~~~ri~v~~~GP-~~~n~~I~~~~~kvVd~~~~~~~~~~~~~lCrCg~S~~~PfCDgsH~~~~~~~g~~~~p~~~~~~  106 (106)
                      ++++++++++.. ..+|+.|++++.|+||.++++++.+..++|||||+|+++|||||||.++|+++|+|||||+|+||
T Consensus         6 ~~~~~~~v~~~~g~~vN~~I~K~~~KVVD~vdiedl~~~~~~~CrC~~Sk~~P~CDGSH~k~n~etGdNvgPlivkk~   83 (83)
T 3s2r_A            6 KQQRMVVVRAEGGGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSCVKHNKANGDNVGPLLLKKQ   83 (83)
T ss_dssp             --------------CCCSSTTTTSSSCCEEEEGGGCCSSEEEECSSSCCTTTTBCCSHHHHHHHHHTCCEEEEEEECC
T ss_pred             cccceEEEEhhhcCccCchhhcCCCceecccchhhccCCceEEEecCCCCCCCccCchhHHHhhhcCCCcCCeEEecC
Confidence            456666666654 69999999999999999999999888999999999999999999999999999999999999997

>3fnv_A CDGSH iron sulfur domain-containing protein 2; diabetes, membrane bound, thiazolidinedione, oxidative stres endoplasmic reticulum, membrane; 2.10A {Homo sapiens}

Probab=99.93  E-value=1.3e-27  Score=161.91  Aligned_cols=65  Identities=62%  Similarity=1.067  Sum_probs=62.5

Q ss_pred             ccccceEeCCCCeeEeceeeeecCCCeEEEEEecccCCCccCccccccCcccCCCccCceeeeeC
Q 033992           42 QGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ  106 (106)
Q Consensus        42 ~~~n~~I~~~~~kvVd~~~~~~~~~~~~~lCrCg~S~~~PfCDgsH~~~~~~~g~~~~p~~~~~~  106 (106)
                      .++|..|++++.++||.+.++++++..++|||||+|+|+|||||||++++.++|+|||||+|+||
T Consensus        17 ~~vN~~I~k~~pKvVd~~diedl~~~k~~~CrC~~S~~~PfCDGsH~~~n~etGdnvgPli~~~k   81 (83)
T 3fnv_A           17 SLINLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLILKKK   81 (83)
T ss_dssp             CCSCSSSCTTSSSEEEEEEGGGCCSSEEEECSSSCCTTTTBCCSHHHHHHHHHCCCEEEEEEECC
T ss_pred             cccCcceecCCCcEeeeechhhccCCCEEEEeCCCCCCCCccCchhhhcccccCCccCCeEEEec
Confidence            48999999999999999999999878899999999999999999999999999999999999986

>4ezf_A Mitoneet, CDGSH iron-sulfur domain-containing protein 1; 2Fe-2S proteins, membrane, mitochondrion, signal-anchor, transmembrane; 1.19A {Homo sapiens} PDB: 2qd0_A 3ree_A 2r13_A 3ew0_A 2qh7_A 4f1e_A 4f2c_A 4f28_A 3lpq_A

Probab=99.93  E-value=1.6e-27  Score=159.54  Aligned_cols=66  Identities=52%  Similarity=1.019  Sum_probs=62.6

Q ss_pred             cccccceEeCCCCeeEeceeeeecCCCeEEEEEecccCCCccCccccccCcccCCCccCceeeeeC
Q 033992           41 GQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ  106 (106)
Q Consensus        41 P~~~n~~I~~~~~kvVd~~~~~~~~~~~~~lCrCg~S~~~PfCDgsH~~~~~~~g~~~~p~~~~~~  106 (106)
                      ..++|..|++++.++||.+.++++..++++|||||+|+++|||||||.+++.++|+|||||+|+||
T Consensus        10 ~~~vN~~i~kd~pKVVd~~diEdl~~~k~~~CrC~~Sk~~PfCDGsH~~hn~etGdnvgPl~~~~k   75 (77)
T 4ezf_A           10 KAMINLHIQKDNPKIVHAFDMEDLGDAKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKK   75 (77)
T ss_dssp             TTCSCSSSCTTSSSEEEEEESBTTSCSEEEECSSSCCTTTTBCCSHHHHHHHHHCCCEEEEEEECB
T ss_pred             ccccccceecCCCcEeeccchhhcCCccEEEEeCCCCCCCCccCCchhhhccccCCCccCeEEEec
Confidence            358999999999999999999999866999999999999999999999999999999999999986

>3ew0_A Mitoneet, CDGSH iron sulfur domain-containing protein 1; mitochondrial outer membrane, 2Fe-2S proteins, isotopic LABE highyield expression; 1.40A {Homo sapiens} PDB: 2r13_A 2qd0_A 3ree_A 2qh7_A 3lpq_A

Probab=99.88  E-value=2.3e-24  Score=145.28  Aligned_cols=63  Identities=54%  Similarity=1.066  Sum_probs=52.9

Q ss_pred             cccceEeCCCCeeEeceeeeecCCCeEEEEEecccCCCccCccccccCcccCCCccCceeeeeC
Q 033992           43 GINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ  106 (106)
Q Consensus        43 ~~n~~I~~~~~kvVd~~~~~~~~~~~~~lCrCg~S~~~PfCDgsH~~~~~~~g~~~~p~~~~~~  106 (106)
                      .+|..|.++...+|+.+.+++.. ..++|||||+|+|+|||||||.++++++|+|||||+|+++
T Consensus        16 ~vni~I~k~gP~~V~~~~led~~-~~~~~C~Cg~S~~~PfCDGsH~~~~~etgdnvgPl~~~~~   78 (80)
T 3ew0_A           16 MINLHIQKDNPKIVHAFDMEDLG-DKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKK   78 (80)
T ss_dssp             CSCSSSCTTSSSEEEEECGGGCC-SEEEECSSSCCTTTTBCCSHHHHHHHHHCCCCCCEEEECC
T ss_pred             ccCeEEeCCCCEEEEeeccccCC-CeEEEeeCCCCCCCcccCCccCCcCcccCCCcCCEEEEec
Confidence            56666777777777755555443 5899999999999999999999999999999999999975

>3tbm_A Putative uncharacterized protein; iron-sulfur, CDGSH, metal binding protein; HET: 2PE TLA; 1.80A {Ralstonia solanacearum}

Probab=99.83  E-value=1.6e-21  Score=128.14  Aligned_cols=58  Identities=19%  Similarity=0.271  Sum_probs=51.0

Q ss_pred             CceEEEecCCcc--cccceEeCCCCeeEeceeeeecCCCeEEEEEecccCCCccCccccccCcccC
Q 033992           31 PRRVVVVRAEGQ--GINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKAT   94 (106)
Q Consensus        31 ~~ri~v~~~GP~--~~n~~I~~~~~kvVd~~~~~~~~~~~~~lCrCg~S~~~PfCDgsH~~~~~~~   94 (106)
                      +.+|++.+||||  +++.+|...+|+.+.      +++..++|||||+|+|+|||||||++.+|+.
T Consensus         7 ~~~I~v~~nGPl~V~G~v~i~~~dG~~~~------~~~~~~~lC~Cg~S~n~PfCDGsH~~~~f~~   66 (69)
T 3tbm_A            7 DVVITARNNGPYHIKGSFRIVTQGGRELP------VEQGQAWLCRCGHSLNKPFCDGSHKRVEFDS   66 (69)
T ss_dssp             -CEEEECTTSCEEEESSCEEEESSCCEEC------CBTTEEEECCSSCCSSTTBCCSHHHHTTCCC
T ss_pred             ceEEEEeCCCCEEEECCCeEECCCCCEEe------eCCCEEEEeeCCCCCCCCccCCCcCCCCccc
Confidence            578999999996  788888888888775      5678999999999999999999999999964

>3tbo_A Zinc finger, CDGSH-type domain protein; iron-sulfur, metal binding protein; 1.50A {Pyrobaculum calidifontis}

Probab=99.69  E-value=3.1e-18  Score=110.02  Aligned_cols=46  Identities=24%  Similarity=0.460  Sum_probs=37.3

Q ss_pred             ceEEEecCCcccccceEeCCCCeeEeceeeeecCCCeEEEEEecccCCCccCccccccCcccCC
Q 033992           32 RRVVVVRAEGQGINLDIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATG   95 (106)
Q Consensus        32 ~ri~v~~~GP~~~n~~I~~~~~kvVd~~~~~~~~~~~~~lCrCg~S~~~PfCDgsH~~~~~~~g   95 (106)
                      .+|++.+|||+.+.          ++        ...++|||||+|+|+|||||||+..+|+..
T Consensus         3 ~~I~v~~ngP~~v~----------~e--------~~~~~lC~CG~S~n~PFCDGSHk~~~f~~~   48 (60)
T 3tbo_A            3 VEIRAIENGPYEVK----------IG--------GRAIYLCRCGHSGSKPHCDGTHAKVGFKAP   48 (60)
T ss_dssp             CEEEECTTSCEEEE----------C-----------CEEECCSSCCTTTTBCCSHHHHHTCCCC
T ss_pred             EEEEEeCCCCEEEE----------EC--------CcEEEEEECCCCCCCCccCCcCCCCccccC
Confidence            58999999998753          11        135799999999999999999999998654

>3tbn_A Putative uncharacterized protein; CDGSH, iron-sulfur, miner2, metal binding protein; 1.15A {Magnetospirillum magneticum}

Probab=99.38  E-value=1.6e-13  Score=93.61  Aligned_cols=35  Identities=31%  Similarity=0.605  Sum_probs=28.8

Q ss_pred             cCCCeEEEEEecccCCCccCccccccCcccCCCccCceeee
Q 033992           64 LSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLK  104 (106)
Q Consensus        64 ~~~~~~~lCrCg~S~~~PfCDgsH~~~~~~~g~~~~p~~~~  104 (106)
                      .+...|+||+||+|+|+|||||||+..+|      .||.++
T Consensus        25 e~g~~~~~C~CG~S~~~PfCDGSH~~~~f------~P~~f~   59 (87)
T 3tbn_A           25 EAGKTYHWCACGRSKAQPFCDGSHKGTGL------APVAYT   59 (87)
T ss_dssp             CTTCCEEECSSSCCSSTTBCCSTTTTTTC------CCEEEC
T ss_pred             CCCCEEEEeeCCCCCCCCCcCCccccCCc------cceEEE
Confidence            34457999999999999999999997654      577665

>3tbn_A Putative uncharacterized protein; CDGSH, iron-sulfur, miner2, metal binding protein; 1.15A {Magnetospirillum magneticum}

Probab=99.00  E-value=1.1e-10  Score=79.55  Aligned_cols=29  Identities=34%  Similarity=0.613  Sum_probs=24.5

Q ss_pred             eeecCCCeEEEEEecccCCCccCcccccc
Q 033992           61 VTELSKPLTAYCRCWRSGTFPLCDGSHVK   89 (106)
Q Consensus        61 ~~~~~~~~~~lCrCg~S~~~PfCDgsH~~   89 (106)
                      +...+...++||+|++|+|.|||||||++
T Consensus        58 f~~e~~~~~~lC~CK~T~n~PfCDGsH~~   86 (87)
T 3tbn_A           58 YTPDKAGTAYFCGCKASKAPPLCDGTHKT   86 (87)
T ss_dssp             ECCSSCEEEEECSSSCCSSTTBCCSGGGT
T ss_pred             EEECCCcEEEEecCCCCCCCCccCCcCCc
Confidence            44444568999999999999999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00