Citrus Sinensis ID: 034170

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100--
Protein Sequence
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDDLDEGT
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHcccEEEEEcEEEEEEEccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHcHEEEEEHHEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccHccccc
Coil and Loop (DISEMBL)
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKLqaghanedgmlgsretnASAKYVILEeiddldegt
Flexible Loop (DISEMBL)
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVIleeiddldegt
Low Complexity Region (SEG)
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDDLDEGT
Disordered region (IsUnstruct)
*****ALAFFMVSTEFVLVSVTSAVTVQIAAVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKLQAGH****************KYVIL**********
Disordered Region (DISOPRED)
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK***************************************
Disordered Region (DISEMBL)
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDDLDEGT
Disordered Region (DISPRO)
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKLQAG***************SAKY**LEEI*******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDDLDEGT
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	102	2.2.26 [Sep-21-2011]
Q8H184	414	Probable sugar phosphate/	yes	no	0.941	0.231	0.641	8e-29
Q10354	374	Uncharacterized transport	yes	no	0.813	0.221	0.271	8e-05

>sp|Q8H184|PT106_ARATH Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana GN=At1g06470 PE=2 SV=1

 Score =  125 bits (314), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 68/106 (64%), Positives = 76/106 (71%), Gaps = 10/106 (9%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIA---------AVAVFYFHDEFTWLKGFGLFT 51
           ML GGALAF MV TE+VLVSVTSAVTV IA          VAVFYFHDEFTWLKG GL  
Sbjct: 305 MLFGGALAFCMVLTEYVLVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGVGLMI 364

Query: 52  ILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDD 97
           I+VGVSLFNWYKY KLQ GH  E+     +  + + KYVIL+E+DD
Sbjct: 365 IMVGVSLFNWYKYDKLQKGHKTEEEK-QLQAPSQTGKYVILDEMDD 409

Arabidopsis thaliana (taxid: 3702)

>sp|Q10354|YDB1_SCHPO Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.01 PE=3 SV=2

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 20/103 (19%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFT 51
           +L  G LAFFMV++EF L+  TS VT+ +  +         +  ++HD    +   GL  
Sbjct: 281 ILVPGTLAFFMVASEFGLIQKTSIVTLSVCGILKEIITIIASTLFYHDILLPINIVGLVI 340

Query: 52  ILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEE 94
            L G+ ++N+Y+  K              +E     +Y++L E
Sbjct: 341 TLCGIGVYNYYRITKGN-----------KKEAEKEVEYIVLNE 372

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
224121440	409	predicted protein [Populus trichocarpa]	1.0	0.249	0.648	4e-32
302143479	529	unnamed protein product [Vitis vinifera]	1.0	0.192	0.618	7e-31
359485471	510	PREDICTED: probable sugar phosphate/phos	1.0	0.2	0.618	8e-31
255569841	519	Triose phosphate/phosphate translocator,	1.0	0.196	0.639	2e-30
357125272	431	PREDICTED: probable sugar phosphate/phos	0.970	0.229	0.623	1e-29
215704227	431	unnamed protein product [Oryza sativa Ja	0.970	0.229	0.623	3e-29
222634967	401	hypothetical protein OsJ_20151 [Oryza sa	0.970	0.246	0.623	4e-29
297605201	471	Os06g0153200 [Oryza sativa Japonica Grou	0.970	0.210	0.623	5e-29
326505650	432	predicted protein [Hordeum vulgare subsp	0.990	0.233	0.608	6e-29
359485467	1044	PREDICTED: G-type lectin S-receptor-like	0.941	0.091	0.598	1e-28

>gi|224121440|ref|XP_002330828.1| predicted protein [Populus trichocarpa] gi|222872630|gb|EEF09761.1| predicted protein [Populus trichocarpa]

 Score =  141 bits (356), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 72/111 (64%), Positives = 81/111 (72%), Gaps = 9/111 (8%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFT 51
           M  GG LAFFMV TEFVL+SVTSAVTV IA V         AV YFHD+FTWLKG GL  
Sbjct: 299 MFFGGTLAFFMVLTEFVLISVTSAVTVTIAGVVKEAVTILVAVIYFHDKFTWLKGAGLLI 358

Query: 52  ILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDDLDEGT 102
           I+VGV LFNWYKYQKLQ G  +E+   GS  TN + KYVIL+E+DDLD+GT
Sbjct: 359 IMVGVGLFNWYKYQKLQKGQTSENDSAGSSPTNVATKYVILDEMDDLDDGT 409

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143479|emb|CBI22040.3| unnamed protein product [Vitis vinifera]

 Score =  137 bits (346), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 73/118 (61%), Positives = 86/118 (72%), Gaps = 16/118 (13%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFT 51
           ML GG LAFFMV TE++LVSVTSAVTV IA V         AVFYFHD+FTWLKG GL T
Sbjct: 412 MLIGGTLAFFMVLTEYILVSVTSAVTVTIAGVVKEAVTILVAVFYFHDQFTWLKGVGLST 471

Query: 52  ILVGVSLFNWYKYQKLQAGHANEDGM-------LGSRETNASAKYVILEEIDDLDEGT 102
           I+VGVSLFNWYKY KLQ GH+NE  M        GS ++N +A+YVILEE+D+ ++ T
Sbjct: 472 IMVGVSLFNWYKYLKLQTGHSNEVDMGDTAGDIAGSLKSNINARYVILEEVDEQEDST 529

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485471|ref|XP_002277992.2| PREDICTED: probable sugar phosphate/phosphate translocator At1g06470-like [Vitis vinifera]

 Score =  137 bits (345), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 73/118 (61%), Positives = 86/118 (72%), Gaps = 16/118 (13%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFT 51
           ML GG LAFFMV TE++LVSVTSAVTV IA V         AVFYFHD+FTWLKG GL T
Sbjct: 393 MLIGGTLAFFMVLTEYILVSVTSAVTVTIAGVVKEAVTILVAVFYFHDQFTWLKGVGLST 452

Query: 52  ILVGVSLFNWYKYQKLQAGHANEDGM-------LGSRETNASAKYVILEEIDDLDEGT 102
           I+VGVSLFNWYKY KLQ GH+NE  M        GS ++N +A+YVILEE+D+ ++ T
Sbjct: 453 IMVGVSLFNWYKYLKLQTGHSNEVDMGDTAGDIAGSLKSNINARYVILEEVDEQEDST 510

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569841|ref|XP_002525884.1| Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor, putative [Ricinus communis] gi|223534798|gb|EEF36488.1| Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor, putative [Ricinus communis]

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/111 (63%), Positives = 78/111 (70%), Gaps = 9/111 (8%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFT 51
           M  GG LAFFMV TE+VL+SVTSAVTV IA V         AVFYFHDEFTWLKG GL  
Sbjct: 409 MFFGGTLAFFMVLTEYVLISVTSAVTVTIAGVVKEAVTILVAVFYFHDEFTWLKGVGLLI 468

Query: 52  ILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDDLDEGT 102
           I+VGVSLFNWYKY KLQ     ED +  S E   SAKYVILEE+DD D+ +
Sbjct: 469 IMVGVSLFNWYKYHKLQKHQIGEDDLAESPEATISAKYVILEEMDDQDDTS 519

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357125272|ref|XP_003564319.1| PREDICTED: probable sugar phosphate/phosphate translocator At1g06470-like [Brachypodium distachyon]

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/109 (62%), Positives = 81/109 (74%), Gaps = 10/109 (9%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFT 51
           ML GG+LAFFMV TE++LVS TSA+TV IA V         AVFYFHDEFTWLKGFGL T
Sbjct: 318 MLIGGSLAFFMVLTEYILVSATSAITVTIAGVVKESVTILVAVFYFHDEFTWLKGFGLIT 377

Query: 52  ILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDDLDE 100
           I+VGVSLFNWYKY+K + GH NED  + S   N  AKY+IL++++  DE
Sbjct: 378 IMVGVSLFNWYKYEKFKKGHINEDE-VSSSSFNGDAKYIILDDLEYQDE 425

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|215704227|dbj|BAG93067.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/109 (62%), Positives = 80/109 (73%), Gaps = 10/109 (9%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFT 51
           ML GG LAFFMV TE+VLVS TSA+TV IA V         AVFYFHDEFTWLKG GL T
Sbjct: 318 MLVGGTLAFFMVLTEYVLVSATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLAT 377

Query: 52  ILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDDLDE 100
           I+VGVSLFNWYKY+K + GH NED  + S   +  AKY+IL++++D DE
Sbjct: 378 IMVGVSLFNWYKYEKYKKGHINEDE-VNSPSFDGDAKYIILDDLEDQDE 425

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222634967|gb|EEE65099.1| hypothetical protein OsJ_20151 [Oryza sativa Japonica Group]

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 68/109 (62%), Positives = 80/109 (73%), Gaps = 10/109 (9%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFT 51
           ML GG LAFFMV TE+VLVS TSA+TV IA V         AVFYFHDEFTWLKG GL T
Sbjct: 288 MLVGGTLAFFMVLTEYVLVSATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLAT 347

Query: 52  ILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDDLDE 100
           I+VGVSLFNWYKY+K + GH NED  + S   +  AKY+IL++++D DE
Sbjct: 348 IMVGVSLFNWYKYEKYKKGHINEDE-VNSPSFDGDAKYIILDDLEDQDE 395

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297605201|ref|NP_001056840.2| Os06g0153200 [Oryza sativa Japonica Group] gi|255676729|dbj|BAF18754.2| Os06g0153200, partial [Oryza sativa Japonica Group]

 Score =  131 bits (330), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 68/109 (62%), Positives = 80/109 (73%), Gaps = 10/109 (9%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFT 51
           ML GG LAFFMV TE+VLVS TSA+TV IA V         AVFYFHDEFTWLKG GL T
Sbjct: 358 MLVGGTLAFFMVLTEYVLVSATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLAT 417

Query: 52  ILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDDLDE 100
           I+VGVSLFNWYKY+K + GH NED  + S   +  AKY+IL++++D DE
Sbjct: 418 IMVGVSLFNWYKYEKYKKGHINEDE-VNSPSFDGDAKYIILDDLEDQDE 465

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326505650|dbj|BAJ95496.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  131 bits (329), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 70/115 (60%), Positives = 83/115 (72%), Gaps = 14/115 (12%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFT 51
           ML GG+LAFFMV TE++LVS TSA+TV IA V         AVFYFHDEFTWLKG GL T
Sbjct: 319 MLIGGSLAFFMVLTEYILVSATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGVGLTT 378

Query: 52  ILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDD----LDEGT 102
           I+VGVSLFNWYKY+K + G  NEDG L S   +  AKY+IL++++D    LDE T
Sbjct: 379 IMVGVSLFNWYKYEKFKKGQINEDG-LDSPSFSGDAKYIILDDLEDEDGFLDEDT 432

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485467|ref|XP_002277954.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like [Vitis vinifera]

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 67/112 (59%), Positives = 82/112 (73%), Gaps = 16/112 (14%)

Query: 7    LAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFTILVGVS 57
            LA ++V TE++LVSVTSAVTV IA V         AVFYFHD+FTWLKG GLFTI+VGVS
Sbjct: 933  LATYLVLTEYILVSVTSAVTVTIAGVVKEAVTILVAVFYFHDQFTWLKGVGLFTIMVGVS 992

Query: 58   LFNWYKYQKLQAGHANEDGM-------LGSRETNASAKYVILEEIDDLDEGT 102
            LFNWYKY KLQ GH+NE  M        GS ++N +A+YVILEE+D+ ++ T
Sbjct: 993  LFNWYKYLKLQTGHSNEVDMGDAAGDIAGSLKSNINARYVILEEVDEQEDST 1044

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
TAIR|locus:2009190	414	AT1G06470 [Arabidopsis thalian	0.941	0.231	0.641	1.3e-27
POMBASE|SPAC22E12.01	374	SPAC22E12.01 "triose phosphate	0.647	0.176	0.32	6.3e-05
ASPGD|ASPL0000010621	582	AN3948 [Emericella nidulans (t	0.696	0.121	0.329	0.00041

TAIR|locus:2009190 AT1G06470 [Arabidopsis thaliana (taxid:3702)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 68/106 (64%), Positives = 76/106 (71%)

Query:     1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFT 51
             ML GGALAF MV TE+VLVSVTSAVTV IA V         AVFYFHDEFTWLKG GL  
Sbjct:   305 MLFGGALAFCMVLTEYVLVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGVGLMI 364

Query:    52 ILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDD 97
             I+VGVSLFNWYKY KLQ GH  E+     +  + + KYVIL+E+DD
Sbjct:   365 IMVGVSLFNWYKYDKLQKGHKTEEEKQ-LQAPSQTGKYVILDEMDD 409

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

POMBASE|SPAC22E12.01 SPAC22E12.01 "triose phosphate transporter (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 103 (41.3 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query:     1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFT 51
             +L  G LAFFMV++EF L+  TS VT+ +  +         +  ++HD    +   GL  
Sbjct:   281 ILVPGTLAFFMVASEFGLIQKTSIVTLSVCGILKEIITIIASTLFYHDILLPINIVGLVI 340

Query:    52 ILVGVSLFNWYKYQK 66
              L G+ ++N+Y+  K
Sbjct:   341 TLCGIGVYNYYRITK 355

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0035436 "triose phosphate transmembrane transport" evidence=ISM

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=ISM

ASPGD|ASPL0000010621 AN3948 [Emericella nidulans (taxid:162425)]

 Score = 98 (39.6 bits), Expect = 0.00041, P = 0.00041
 Identities = 27/82 (32%), Positives = 42/82 (51%)

Query:     5 GALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFTILVG 55
             G LAF M+S+EF L+  +S VT+ I  +         A   FHD+ T +   GL   +  
Sbjct:   374 GVLAFCMISSEFALLKRSSVVTLSICGIFKEVVTITAAGVIFHDKLTAVNVTGLIVTIGS 433

Query:    56 VSLFNWYKYQKL--QAGHANED 75
             ++ +N+ K  K+  +A H N D
Sbjct:   434 IASYNYMKVSKMRAEAQHNNWD 455


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.137   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      102       102   0.00091  102 3  11 22  0.37    30
                                                     29  0.48    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  492 (52 KB)
  Total size of DFA:  105 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.99u 0.12s 9.11t   Elapsed:  00:00:00
  Total cpu time:  8.99u 0.12s 9.11t   Elapsed:  00:00:00
  Start:  Fri May 10 16:36:51 2013   End:  Fri May 10 16:36:51 2013

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_1470076 hypothetical protein (409 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	102
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	1e-09

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 9/70 (12%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIA---------AVAVFYFHDEFTWLKGFGLFT 51
           +L  G LAF    + F L+  TS +T  +A          ++V  F D  T+L   GL  
Sbjct: 80  LLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVLSVIIFGDPVTFLNILGLAI 139

Query: 52  ILVGVSLFNW 61
            ++GV L+++
Sbjct: 140 AILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	102
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.66
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.56
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.18
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.15
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.1
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.07
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.87
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.47
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	97.95
PLN00411	358	nodulin MtN21 family protein; Provisional	97.16
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	96.98
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	96.49
PRK10532	293	threonine and homoserine efflux system; Provisiona	95.85
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	95.77
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.53
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	95.42
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	95.34
PF06679	163	DUF1180: Protein of unknown function (DUF1180); In	95.09
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	95.01
PLN00411	358	nodulin MtN21 family protein; Provisional	94.73
PRK15430	296	putative chloramphenical resistance permease RarD;	94.48
PRK11689	295	aromatic amino acid exporter; Provisional	94.33
PF13536	113	EmrE: Multidrug resistance efflux transporter	94.2
KOG1580	337	consensus UDP-galactose transporter related protei	94.18
PRK15430	296	putative chloramphenical resistance permease RarD;	94.16
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	94.12
KOG1581	327	consensus UDP-galactose transporter related protei	94.12
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	93.9
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	93.35
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	93.22
KOG2766	336	consensus Predicted membrane protein [Function unk	93.21
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	93.03
PRK09541	110	emrE multidrug efflux protein; Reviewed	92.93
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	92.73
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	92.7
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	92.34
PRK11272	292	putative DMT superfamily transporter inner membran	92.0
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	91.36
PRK10650	109	multidrug efflux system protein MdtI; Provisional	91.08
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	91.03
COG2076	106	EmrE Membrane transporters of cations and cationic	90.08
PRK11431	105	multidrug efflux system protein; Provisional	89.54
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	89.27
COG2510	140	Predicted membrane protein [Function unknown]	87.24
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	85.38
PRK11689	295	aromatic amino acid exporter; Provisional	83.83
COG2962	293	RarD Predicted permeases [General function predict	81.9
COG0697	292	RhaT Permeases of the drug/metabolite transporter	81.35
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	80.31

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.66  E-value=8.2e-17  Score=128.54  Aligned_cols=68  Identities=28%  Similarity=0.479  Sum_probs=63.4

Q ss_pred             chhHHHHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHHHHHHHhh
Q 034170            2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKLQA   69 (102)
Q Consensus         2 ~~~g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~k~~~~~~   69 (102)
                      +++.++||++|++.|++|++|||||++|+|         .|+++|++++|+.|++|++++++|+.+|++.|.+++++
T Consensus       239 ~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  239 LLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG  315 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            456699999999999999999999999999         89999999999999999999999999999999887643

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.56  E-value=8e-16  Score=106.41  Aligned_cols=60  Identities=32%  Similarity=0.585  Sum_probs=58.3

Q ss_pred             chhHHHHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHH
Q 034170            2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNW   61 (102)
Q Consensus         2 ~~~g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~   61 (102)
                      +++|+++|++|+++|+++++|||+|++|+|         +|+++|||++|+.|++|++++++|+++|+|
T Consensus        85 ~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   85 ILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            578999999999999999999999999999         999999999999999999999999999986

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.18  E-value=5.2e-12  Score=101.69  Aligned_cols=59  Identities=37%  Similarity=0.593  Sum_probs=56.5

Q ss_pred             chhHHHHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHH
Q 034170            2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFN   60 (102)
Q Consensus         2 ~~~g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~   60 (102)
                      .++|.+||++..|||+++.+||.+|++++|         +++.+-+|.++..|++|+.+|+.|+.+|.
T Consensus       247 ~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~  314 (349)
T KOG1443|consen  247 SLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR  314 (349)
T ss_pred             HHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999         88899999999999999999999999993

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.15  E-value=2.1e-11  Score=97.72  Aligned_cols=71  Identities=28%  Similarity=0.433  Sum_probs=64.2

Q ss_pred             CchhHHHHHHHHHHHHHHhccccchhheece--------eeeeeecC-ccccchhhhhhHHHHHHHHHHHHHHHHHhhCC
Q 034170            1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAA--------VAVFYFHD-EFTWLKGFGLFTILVGVSLFNWYKYQKLQAGH   71 (102)
Q Consensus         1 l~~~g~lAF~lnls~F~lI~~TSaLT~sV~G--------lsv~ifgd-~~t~~n~~G~~I~i~G~~~Y~~~k~~~~~~~~   71 (102)
                      ++++|+++|.++++.|++...+|++|++++|        ++.++++| ++++.|++|+.+.++|.++|++.+.++++.++
T Consensus       231 ~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~~  310 (314)
T KOG1444|consen  231 MLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQPP  310 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCCC
Confidence            4689999999999999999999999999999        77777776 89999999999999999999999988765544

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.10  E-value=4.2e-12  Score=101.53  Aligned_cols=71  Identities=24%  Similarity=0.259  Sum_probs=67.6

Q ss_pred             CchhHHHHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHHHHHHHhhCC
Q 034170            1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKLQAGH   71 (102)
Q Consensus         1 l~~~g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~k~~~~~~~~   71 (102)
                      |+++|+.+|+||+.+++.|+.||||||+|.|         +++.+++|..+...|.|.++.++|..+|+++|.+|+++.+
T Consensus       258 mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~  337 (347)
T KOG1442|consen  258 MTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKAS  337 (347)
T ss_pred             HHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhc
Confidence            5789999999999999999999999999999         9999999999999999999999999999999999987654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.07  E-value=4.8e-11  Score=94.86  Aligned_cols=62  Identities=19%  Similarity=0.389  Sum_probs=59.0

Q ss_pred             chhHHHHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHHH
Q 034170            2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK   63 (102)
Q Consensus         2 ~~~g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~k   63 (102)
                      +++|+.+|+.|.++|.+++++||+|++|++         +|+++|||++|+.+++|.+++++|+++|+++|
T Consensus       280 ~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        280 FFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            468899999999999999999999999999         89999999999999999999999999999875

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.87  E-value=1.6e-09  Score=83.10  Aligned_cols=59  Identities=24%  Similarity=0.389  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHHHHH
Q 034170            7 LAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQ   65 (102)
Q Consensus         7 lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~k~~   65 (102)
                      ..++.|.+.|.+++++||.|.++.+         +|+++|||++|+.+++|.++++.|+.+|++.|.+
T Consensus       230 ~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~  297 (302)
T TIGR00817       230 FFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQ  297 (302)
T ss_pred             HHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence            3445668889999999999999999         8899999999999999999999999999987643

specificities overlap.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.47  E-value=7e-08  Score=74.75  Aligned_cols=65  Identities=23%  Similarity=0.289  Sum_probs=58.0

Q ss_pred             chhHHHHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHHHHHH
Q 034170            2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQK   66 (102)
Q Consensus         2 ~~~g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~k~~~   66 (102)
                      ++.++.+++-....|.+++++||+|.++..         +|+++|++++++.+++|+++.+.|+.+|++.|.++
T Consensus       229 ~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  229 LLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            456667777777889999999999999999         89999999999999999999999999999987654

; GO: 0055085 transmembrane transport

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=97.95  E-value=4e-06  Score=66.25  Aligned_cols=72  Identities=18%  Similarity=0.234  Sum_probs=65.1

Q ss_pred             CchhHHHHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHHHHHHHhhCC
Q 034170            1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKLQAGH   71 (102)
Q Consensus         1 l~~~g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~k~~~~~~~~   71 (102)
                      |+++|+.++...+|.-+++..||+-|++..|         .|.++|+.|++...++.+.+-....+.|.+.|.+++|+++
T Consensus       227 m~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~q~  306 (309)
T COG5070         227 MFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQK  306 (309)
T ss_pred             HHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999         7888899999999999999999999999999887665554


Q ss_pred             C
Q 034170           72 A   72 (102)
Q Consensus        72 ~   72 (102)
                      .
T Consensus       307 ~  307 (309)
T COG5070         307 D  307 (309)
T ss_pred             C
Confidence            3

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.16  E-value=0.00039  Score=56.17  Aligned_cols=68  Identities=13%  Similarity=0.089  Sum_probs=51.2

Q ss_pred             HHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHHHHHHHhhCCCCCCCCCCcc
Q 034170           14 TEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKLQAGHANEDGMLGSR   81 (102)
Q Consensus        14 s~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~k~~~~~~~~~~~~~~~~~~   81 (102)
                      ..+..+++.+|..-++..         ++++++||++++..++|.++.+.|+.+-++.|.+|.++.+..+.++.+.|
T Consensus       272 lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~~~~~~~~~~~~~~~  348 (358)
T PLN00411        272 IHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEKDQLLSFSGKEKTP  348 (358)
T ss_pred             HHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhhhhhcccCccccccch
Confidence            344578888888777766         89999999999999999999999999988766555444444434444443

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=96.98  E-value=0.0012  Score=53.45  Aligned_cols=65  Identities=23%  Similarity=0.369  Sum_probs=52.7

Q ss_pred             chhHHHHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHHHHHH
Q 034170            2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQK   66 (102)
Q Consensus         2 ~~~g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~k~~~   66 (102)
                      +.|.+.-++-.=..+.+..+|++||.++.=         +|+..|.+++|+.-++|-.+..+|.++|+-...+.
T Consensus       246 l~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~~  319 (330)
T KOG1583|consen  246 LFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNHP  319 (330)
T ss_pred             HHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcCc
Confidence            344444455555566677899999999887         99999999999999999999999999999765443

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=96.49  E-value=0.00078  Score=54.51  Aligned_cols=48  Identities=21%  Similarity=0.551  Sum_probs=41.6

Q ss_pred             HHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHHH
Q 034170           16 FVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK   63 (102)
Q Consensus        16 F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~k   63 (102)
                      -.+++.+||..+++.=         +++++||.++++.-++|.++.++|.+.|+...
T Consensus       251 p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  251 PIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            3478899998887743         88899999999999999999999999999743

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=95.85  E-value=0.0055  Score=47.18  Aligned_cols=49  Identities=10%  Similarity=0.111  Sum_probs=42.0

Q ss_pred             HHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHH
Q 034170           14 TEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWY   62 (102)
Q Consensus        14 s~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~   62 (102)
                      ..+..+++.+|-+.++..         +++++|||++++..++|.++.++|++.+.+.
T Consensus       225 l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        225 LEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            335678888888777776         8999999999999999999999999999754

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=95.77  E-value=0.0036  Score=40.48  Aligned_cols=52  Identities=21%  Similarity=0.373  Sum_probs=41.6

Q ss_pred             HHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHH
Q 034170            9 FFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFN   60 (102)
Q Consensus         9 F~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~   60 (102)
                      .+-.++-+..++++++-..++..         ++++++++++++.+++|+.++++|+++-+
T Consensus        65 ~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   65 ALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             ehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            44455566667777776666655         88899999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00803 nst UDP-galactose transporter

Probab=95.53  E-value=0.0007  Score=49.99  Aligned_cols=49  Identities=12%  Similarity=0.056  Sum_probs=43.6

Q ss_pred             HHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHH
Q 034170           11 MVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLF   59 (102)
Q Consensus        11 lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y   59 (102)
                      ..++..++++++++++.+++.         +|+++||+++++..++|..+.+.|+.+|
T Consensus       165 ~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       165 GGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             cCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            345677889999999999888         8999999999999999999999998876

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=95.42  E-value=0.0033  Score=48.36  Aligned_cols=62  Identities=19%  Similarity=0.258  Sum_probs=57.4

Q ss_pred             chhHHHHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHHH
Q 034170            2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK   63 (102)
Q Consensus         2 ~~~g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~k   63 (102)
                      .+++++=.+.|...|..+.+..|.|++|..         +++++++.+++..+|+++++.++|+++.....
T Consensus        21 ~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~   91 (244)
T PF04142_consen   21 AVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS   91 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence            578899999999999999999999999999         89999999999999999999999999877643

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=95.34  E-value=0.0069  Score=41.48  Aligned_cols=28  Identities=21%  Similarity=0.305  Sum_probs=26.1

Q ss_pred             eeeeeecCccccchhhhhhHHHHHHHHH
Q 034170           32 VAVFYFHDEFTWLKGFGLFTILVGVSLF   59 (102)
Q Consensus        32 lsv~ifgd~~t~~n~~G~~I~i~G~~~Y   59 (102)
                      +|+++|||++|+.+++|+.+.++|+++-
T Consensus        80 ~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         80 AAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999999753

>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins

Probab=95.09  E-value=0.024  Score=42.01  Aligned_cols=15  Identities=33%  Similarity=0.393  Sum_probs=10.1

Q ss_pred             ceeecccccccCCCC
Q 034170           88 KYVILEEIDDLDEGT  102 (102)
Q Consensus        88 ~~~~l~~~~~~~~~~  102 (102)
                      ..++|+|+|||||.|
T Consensus       140 Em~pL~~ddedeD~T  154 (163)
T PF06679_consen  140 EMAPLEEDDEDEDST  154 (163)
T ss_pred             eecccCCCccccccc
Confidence            447787777777755

Their function is unknown.

>TIGR00688 rarD rarD protein

Probab=95.01  E-value=0.011  Score=44.28  Aligned_cols=56  Identities=14%  Similarity=0.126  Sum_probs=44.7

Q ss_pred             hhHHHHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHH
Q 034170            3 SGGALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSL   58 (102)
Q Consensus         3 ~~g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~   58 (102)
                      +.|++.+.-.++-|.-++++++-+-++..         ++.++++|+++...++|+.++++|+++
T Consensus        75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~l  139 (256)
T TIGR00688        75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVIS  139 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence            34555555567777778888777766665         888999999999999999999999864

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=94.73  E-value=0.015  Score=47.04  Aligned_cols=59  Identities=17%  Similarity=0.236  Sum_probs=47.2

Q ss_pred             chhHHHHHHHHHHHHHHhccccchhheece---------eeeee------ecCccccchhhhhhHHHHHHHHHH
Q 034170            2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFY------FHDEFTWLKGFGLFTILVGVSLFN   60 (102)
Q Consensus         2 ~~~g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~i------fgd~~t~~n~~G~~I~i~G~~~Y~   60 (102)
                      .+.|++++..+...|.-++.|||-.-++..         +++++      ++++++..+++|++++++|+++-.
T Consensus        82 ~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~  155 (358)
T PLN00411         82 GLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI  155 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence            345666655666788888999998888777         66666      699999999999999999997644

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=94.48  E-value=0.043  Score=42.27  Aligned_cols=55  Identities=13%  Similarity=0.019  Sum_probs=42.0

Q ss_pred             HHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHHHHHH
Q 034170           12 VSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQK   66 (102)
Q Consensus        12 nls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~k~~~   66 (102)
                      .++-+..+++.+|-+.++..         ++++++||++++.+++|+++.+.|+.....--...
T Consensus       227 ~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~~  290 (296)
T PRK15430        227 LLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYT  290 (296)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34555667777777766666         89999999999999999999988887666544333

>PRK11689 aromatic amino acid exporter; Provisional

Probab=94.33  E-value=0.03  Score=43.10  Aligned_cols=50  Identities=12%  Similarity=0.042  Sum_probs=42.0

Q ss_pred             HHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHH
Q 034170           12 VSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNW   61 (102)
Q Consensus        12 nls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~   61 (102)
                      -+..+..+++.+|...++..         ++++++||++++..++|.++.+.|+++-..
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            44456788899988887776         889999999999999999999999866643

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=94.20  E-value=0.03  Score=37.51  Aligned_cols=58  Identities=24%  Similarity=0.454  Sum_probs=40.0

Q ss_pred             HHHHH-HHHHHHHHHhccccchhheece--------eeeeeecCccccchhhhhhHHHHHHHHHHHH
Q 034170            5 GALAF-FMVSTEFVLVSVTSAVTVQIAA--------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWY   62 (102)
Q Consensus         5 g~lAF-~lnls~F~lI~~TSaLT~sV~G--------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~   62 (102)
                      |++.+ .-++..+.-++.+++...-+.+        ++.++|+++++...++|+.++++|+++=++-
T Consensus        41 g~~~~~~~~~~~~~a~~~~~~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   41 GLLGFGVAYLLFFYALSYAPALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWS  107 (113)
T ss_pred             HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence            44444 3344444455555543332222        8999999999999999999999999877664

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.18  E-value=0.037  Score=44.46  Aligned_cols=54  Identities=13%  Similarity=0.175  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHH
Q 034170            5 GALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSL   58 (102)
Q Consensus         5 g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~   58 (102)
                      |+.+-+=.++.|.-+...+|||-||.-         +|+++|+++++..+|+|-++.+.|...
T Consensus       248 ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  248 AIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA  310 (337)
T ss_pred             HHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence            344444567788999999999999998         899999999999999999998888754

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=94.16  E-value=0.027  Score=43.39  Aligned_cols=56  Identities=9%  Similarity=0.093  Sum_probs=44.8

Q ss_pred             hHHHHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHH
Q 034170            4 GGALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLF   59 (102)
Q Consensus         4 ~g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y   59 (102)
                      +++..+..+++.|.-++++++-.-++..         +++++++|+++...++|++++++|+++-
T Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li  143 (296)
T PRK15430         79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQ  143 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence            3444445577778888888877776666         7888899999999999999999998764

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=94.12  E-value=0.02  Score=40.23  Aligned_cols=30  Identities=27%  Similarity=0.508  Sum_probs=27.8

Q ss_pred             eeeeeecCccccchhhhhhHHHHHHHHHHH
Q 034170           32 VAVFYFHDEFTWLKGFGLFTILVGVSLFNW   61 (102)
Q Consensus        32 lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~   61 (102)
                      +++++|+|++++.+++|+.+.++|++.-+.
T Consensus        74 ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         74 FSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            899999999999999999999999988654

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.12  E-value=0.012  Score=47.91  Aligned_cols=54  Identities=15%  Similarity=0.166  Sum_probs=47.1

Q ss_pred             HHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHHHHHH
Q 034170           13 STEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQK   66 (102)
Q Consensus        13 ls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~k~~~   66 (102)
                      +..|.-|.+..|||+...-         +|+++||.++++.+++|+.+.+.|+.+=.+.|.++
T Consensus       256 ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~  318 (327)
T KOG1581|consen  256 LFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKK  318 (327)
T ss_pred             heehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHhc
Confidence            3456778999999998777         99999999999999999999999999888887773

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=93.90  E-value=0.021  Score=44.82  Aligned_cols=35  Identities=23%  Similarity=0.471  Sum_probs=27.6

Q ss_pred             cccchhhhhhHHHHHHHHHHHHHHHHHhhCCCCCC
Q 034170           41 FTWLKGFGLFTILVGVSLFNWYKYQKLQAGHANED   75 (102)
Q Consensus        41 ~t~~n~~G~~I~i~G~~~Y~~~k~~~~~~~~~~~~   75 (102)
                      ..++|++|++++++|..+|...|..++++.++.+.
T Consensus       114 ~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~  148 (254)
T PF07857_consen  114 SPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEE  148 (254)
T ss_pred             hhHHHHHHHHHHHHHHHheeeecCCCCCccccccc
Confidence            46889999999999999999998877544433333

The region concerned is approximately 280 residues long.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=93.35  E-value=0.047  Score=40.30  Aligned_cols=52  Identities=13%  Similarity=-0.021  Sum_probs=39.2

Q ss_pred             HHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHH
Q 034170            9 FFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFN   60 (102)
Q Consensus         9 F~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~   60 (102)
                      .+.+++.|.-++++++-.-++.-         ++.++++|++++.+++|+.++++|+++..
T Consensus        58 ~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~  118 (260)
T TIGR00950        58 GVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLL  118 (260)
T ss_pred             HHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhc
Confidence            44446666777776654443333         78888999999999999999999998865

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=93.22  E-value=0.045  Score=41.94  Aligned_cols=55  Identities=20%  Similarity=0.202  Sum_probs=42.5

Q ss_pred             hHHHHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHH
Q 034170            4 GGALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSL   58 (102)
Q Consensus         4 ~g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~   58 (102)
                      .|++..+....++.-++++|+-..++.-         ++.++++++++...++|+.++++|+++
T Consensus        71 ~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l  134 (302)
T TIGR00817        71 VAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVAL  134 (302)
T ss_pred             HHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhh
Confidence            4555555566777888888887777766         778888999998888888888888864

specificities overlap.

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=93.21  E-value=0.043  Score=44.40  Aligned_cols=56  Identities=20%  Similarity=0.297  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHHH-----Hhccccchhheece-------eeeeeecCccccchhhhhhHHHHHHHHHH
Q 034170            5 GALAFFMVSTEFV-----LVSVTSAVTVQIAA-------VAVFYFHDEFTWLKGFGLFTILVGVSLFN   60 (102)
Q Consensus         5 g~lAF~lnls~F~-----lI~~TSaLT~sV~G-------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~   60 (102)
                      +.++|++...-|.     +++.+|+-.+++.=       +-+..||-++.|+=++..+.++.|.+.|+
T Consensus       231 ~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i~~FgYhv~wLY~laF~~i~~GliiYs  298 (336)
T KOG2766|consen  231 LYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLIRTFGYHVDWLYFLAFATIATGLIIYS  298 (336)
T ss_pred             HHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHHHHHhcchhhhhHHHHHHHHHhhEEee
Confidence            4455555443332     56666666555543       55578999999999999999999999994

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=93.03  E-value=0.066  Score=41.23  Aligned_cols=47  Identities=17%  Similarity=0.181  Sum_probs=36.3

Q ss_pred             HHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHHH
Q 034170           17 VLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK   63 (102)
Q Consensus        17 ~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~k   63 (102)
                      ..+++..|-+.++..         ++++++||++++..++|.++.++|+.+=.+-+
T Consensus       234 ~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        234 TLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            345666665555544         88999999999999999999999997655433

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=92.93  E-value=0.082  Score=36.47  Aligned_cols=30  Identities=20%  Similarity=0.316  Sum_probs=28.0

Q ss_pred             eeeeeecCccccchhhhhhHHHHHHHHHHH
Q 034170           32 VAVFYFHDEFTWLKGFGLFTILVGVSLFNW   61 (102)
Q Consensus        32 lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~   61 (102)
                      +++++|+|++++.+++|+++.++|++.-+.
T Consensus        74 ~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         74 LSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            899999999999999999999999998754

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=92.73  E-value=0.081  Score=40.31  Aligned_cols=46  Identities=11%  Similarity=0.294  Sum_probs=34.0

Q ss_pred             HHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHH
Q 034170           13 STEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSL   58 (102)
Q Consensus        13 ls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~   58 (102)
                      +.-+..+++..+-+.+...         ++++++||++++..++|..+.++|+++
T Consensus       226 ~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       226 ALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            3444556665554433332         888999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=92.70  E-value=0.078  Score=40.40  Aligned_cols=57  Identities=12%  Similarity=0.076  Sum_probs=37.8

Q ss_pred             hHHHHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHH
Q 034170            4 GGALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFN   60 (102)
Q Consensus         4 ~g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~   60 (102)
                      +|+....-.++.+.-.+++++-.-++..         +++++|+|+++..+++|+.++++|+++-.
T Consensus        69 ~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~  134 (281)
T TIGR03340        69 SAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLG  134 (281)
T ss_pred             HHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence            3444444444445445554433332221         78899999999999999999999997644

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=92.34  E-value=0.057  Score=39.81  Aligned_cols=45  Identities=11%  Similarity=0.061  Sum_probs=38.9

Q ss_pred             HHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHH
Q 034170           13 STEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVS   57 (102)
Q Consensus        13 ls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~   57 (102)
                      +.-+..+++.++-+.++..         +++++++|++++..++|..+.+.|++
T Consensus       207 ~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       207 FLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            3456678999998888877         88999999999999999999999863

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=92.00  E-value=0.13  Score=39.48  Aligned_cols=49  Identities=12%  Similarity=0.008  Sum_probs=40.4

Q ss_pred             HHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHH
Q 034170           14 TEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWY   62 (102)
Q Consensus        14 s~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~   62 (102)
                      .-+..+++.++-+.++..         ++++++||++|+..++|..+.+.|+.+-++.
T Consensus       229 l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        229 AYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            445566777776666666         8899999999999999999999999887763

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=91.36  E-value=0.1  Score=42.36  Aligned_cols=58  Identities=17%  Similarity=0.313  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHHHHHhccccchhheece---------eeeeeecCccccchhhhhhHHHHHHHHHHHH
Q 034170            5 GALAFFMVSTEFVLVSVTSAVTVQIAA---------VAVFYFHDEFTWLKGFGLFTILVGVSLFNWY   62 (102)
Q Consensus         5 g~lAF~lnls~F~lI~~TSaLT~sV~G---------lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~   62 (102)
                      |++=+.-|+......++||..+.++..         +|+++.+++.++.+++|+.+|++|+++=.+.
T Consensus        86 a~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s  152 (334)
T PF06027_consen   86 ALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS  152 (334)
T ss_pred             HHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence            455566677778888899988888777         8999999999999999999999998875543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=91.08  E-value=0.17  Score=35.02  Aligned_cols=29  Identities=17%  Similarity=0.331  Sum_probs=26.7

Q ss_pred             eeeeeecCccccchhhhhhHHHHHHHHHH
Q 034170           32 VAVFYFHDEFTWLKGFGLFTILVGVSLFN   60 (102)
Q Consensus        32 lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~   60 (102)
                      +++++|+|++++.+++|+.+.+.|++.-+
T Consensus        79 ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         79 AGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            88999999999999999999999998643

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=91.03  E-value=0.079  Score=37.38  Aligned_cols=27  Identities=33%  Similarity=0.616  Sum_probs=24.6

Q ss_pred             eeecCccccchhhhhhHHHHHHHHHHH
Q 034170           35 FYFHDEFTWLKGFGLFTILVGVSLFNW   61 (102)
Q Consensus        35 ~ifgd~~t~~n~~G~~I~i~G~~~Y~~   61 (102)
                      ++|||++|+.+++|+.+.++|+++-+.
T Consensus        96 ~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         96 PWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            379999999999999999999998764

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=90.08  E-value=0.25  Score=34.41  Aligned_cols=30  Identities=33%  Similarity=0.503  Sum_probs=28.0

Q ss_pred             eeeeeecCccccchhhhhhHHHHHHHHHHH
Q 034170           32 VAVFYFHDEFTWLKGFGLFTILVGVSLFNW   61 (102)
Q Consensus        32 lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~   61 (102)
                      +++++|+|++++.+++|+.+.++|++.-+.
T Consensus        74 ~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          74 VGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            899999999999999999999999987664

>PRK11431 multidrug efflux system protein; Provisional

Probab=89.54  E-value=0.26  Score=33.77  Aligned_cols=29  Identities=10%  Similarity=0.157  Sum_probs=27.2

Q ss_pred             eeeeeecCccccchhhhhhHHHHHHHHHH
Q 034170           32 VAVFYFHDEFTWLKGFGLFTILVGVSLFN   60 (102)
Q Consensus        32 lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~   60 (102)
                      +++++|+|++++.+++|+.+.++|++.-+
T Consensus        73 ig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         73 TGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            89999999999999999999999998754

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=89.27  E-value=0.19  Score=40.05  Aligned_cols=27  Identities=19%  Similarity=0.436  Sum_probs=17.3

Q ss_pred             eeeeeecCccccchhhhhhHHHHHHHH
Q 034170           32 VAVFYFHDEFTWLKGFGLFTILVGVSL   58 (102)
Q Consensus        32 lsv~ifgd~~t~~n~~G~~I~i~G~~~   58 (102)
                      ++.++++++.+...++|+.++++|+++
T Consensus       157 ls~~~l~ek~s~~~~l~l~l~v~Gv~l  183 (350)
T PTZ00343        157 LSILFLKQFLNLYAYLSLIPIVGGVAL  183 (350)
T ss_pred             HHHHHhCCCccHHHHHHHHHHHHHHHh
Confidence            556666666666666666666666653

>COG2510 Predicted membrane protein [Function unknown]

Probab=87.24  E-value=0.33  Score=35.36  Aligned_cols=27  Identities=15%  Similarity=0.499  Sum_probs=25.3

Q ss_pred             eeeeeecCccccchhhhhhHHHHHHHH
Q 034170           32 VAVFYFHDEFTWLKGFGLFTILVGVSL   58 (102)
Q Consensus        32 lsv~ifgd~~t~~n~~G~~I~i~G~~~   58 (102)
                      +|++++||++|..+++|+.+..+|.++
T Consensus       110 ls~lfL~E~ls~~~~iG~~LI~~Gail  136 (140)
T COG2510         110 LSILFLGERLSLPTWIGIVLIVIGAIL  136 (140)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHhCeee
Confidence            889999999999999999999999865

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=85.38  E-value=0.36  Score=37.39  Aligned_cols=36  Identities=14%  Similarity=0.326  Sum_probs=31.4

Q ss_pred             eeeeeecCccccchhhhhhHHHHHHHHHHHHHHHHH
Q 034170           32 VAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKL   67 (102)
Q Consensus        32 lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~k~~~~   67 (102)
                      +++++++.+.+..++++..+..+|++.....+..++
T Consensus       107 ~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~  142 (303)
T PF08449_consen  107 LGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS  142 (303)
T ss_pred             HHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence            678889999999999999999999999998765543

; GO: 0055085 transmembrane transport

>PRK11689 aromatic amino acid exporter; Provisional

Probab=83.83  E-value=0.52  Score=36.25  Aligned_cols=29  Identities=31%  Similarity=0.446  Sum_probs=24.2

Q ss_pred             eeeeeecCccccchhhhhhHHHHHHHHHH
Q 034170           32 VAVFYFHDEFTWLKGFGLFTILVGVSLFN   60 (102)
Q Consensus        32 lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~   60 (102)
                      +++++++|+++...++|++++++|+++-.
T Consensus       108 l~~~~~~e~~~~~~~~g~~l~~~Gv~li~  136 (295)
T PRK11689        108 FAVLFNGQKANWLLIPGLLLALAGVAWVL  136 (295)
T ss_pred             HHHHHhcCCccHHHHHHHHHHHHhHhhee
Confidence            67777899999999999999999986543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=81.90  E-value=0.74  Score=37.19  Aligned_cols=39  Identities=18%  Similarity=0.189  Sum_probs=35.2

Q ss_pred             eeeeeecCccccchhhhhhHHHHHHHHHHHHHHHHHhhC
Q 034170           32 VAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKLQAG   70 (102)
Q Consensus        32 lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~k~~~~~~~   70 (102)
                      +++++|||+++..+.+.++..-+|.++|.+-..+++++.
T Consensus       254 lav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~~  292 (293)
T COG2962         254 LAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARKK  292 (293)
T ss_pred             HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            899999999999999999999999999999887766553

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=81.35  E-value=0.86  Score=33.22  Aligned_cols=52  Identities=23%  Similarity=0.330  Sum_probs=35.5

Q ss_pred             HHHHHHHHHhccccchhheece---------eee-eeecCccccchhhhhhHHHHHHHHHHH
Q 034170           10 FMVSTEFVLVSVTSAVTVQIAA---------VAV-FYFHDEFTWLKGFGLFTILVGVSLFNW   61 (102)
Q Consensus        10 ~lnls~F~lI~~TSaLT~sV~G---------lsv-~ifgd~~t~~n~~G~~I~i~G~~~Y~~   61 (102)
                      .-.++-|..++++++-.-.+..         ++. ++++++++...+.|+.+.+.|+++-..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~  143 (292)
T COG0697          82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILL  143 (292)
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheec
Confidence            3334444446666555444443         554 556999999999999999999987665

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=80.31  E-value=1  Score=34.60  Aligned_cols=29  Identities=17%  Similarity=0.274  Sum_probs=24.4

Q ss_pred             eeeeeecCccccchhhhhhHHHHHHHHHH
Q 034170           32 VAVFYFHDEFTWLKGFGLFTILVGVSLFN   60 (102)
Q Consensus        32 lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~   60 (102)
                      +++++++++++...++|++++++|+++-.
T Consensus       103 l~~~~l~e~~~~~~~~~~~l~~~Gv~ll~  131 (299)
T PRK11453        103 LGAFTFGERLQGKQLAGIALAIFGVLVLI  131 (299)
T ss_pred             HHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence            77888999999999999999999986543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	102
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	96.74
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	94.45

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=96.74  E-value=0.00045  Score=48.28  Aligned_cols=30  Identities=20%  Similarity=0.327  Sum_probs=22.4

Q ss_pred             eeeeeecCccccchhhhhhHHHHHHHHHHH
Q 034170           32 VAVFYFHDEFTWLKGFGLFTILVGVSLFNW   61 (102)
Q Consensus        32 lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~   61 (102)
                      +++++|||++|+.+++|+.+.++|+++.+.
T Consensus        74 ~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           74 LSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            889999999999999999999999999875

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=94.45  E-value=0.018  Score=38.12  Aligned_cols=31  Identities=19%  Similarity=0.316  Sum_probs=28.7

Q ss_pred             eeeeeecCccccchhhhhhHHHHHHHHHHHH
Q 034170           32 VAVFYFHDEFTWLKGFGLFTILVGVSLFNWY   62 (102)
Q Consensus        32 lsv~ifgd~~t~~n~~G~~I~i~G~~~Y~~~   62 (102)
                      +++++|||++|+.+++|+.+.++|++.-+..
T Consensus        74 ~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           74 LSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            8899999999999999999999999988653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00