Citrus Sinensis ID: 034253
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 100 | ||||||
| 359491609 | 102 | PREDICTED: uncharacterized protein LOC10 | 0.99 | 0.970 | 0.757 | 9e-36 | |
| 224119246 | 117 | predicted protein [Populus trichocarpa] | 0.95 | 0.811 | 0.731 | 6e-34 | |
| 118482384 | 100 | unknown [Populus trichocarpa] gi|1184896 | 0.95 | 0.95 | 0.731 | 8e-34 | |
| 224133448 | 102 | predicted protein [Populus trichocarpa] | 0.96 | 0.941 | 0.735 | 3e-32 | |
| 449440710 | 101 | PREDICTED: uncharacterized protein LOC10 | 0.94 | 0.930 | 0.718 | 2e-31 | |
| 449440712 | 98 | PREDICTED: uncharacterized protein LOC10 | 0.94 | 0.959 | 0.718 | 2e-31 | |
| 255540773 | 101 | conserved hypothetical protein [Ricinus | 0.94 | 0.930 | 0.711 | 2e-30 | |
| 297815972 | 97 | hypothetical protein ARALYDRAFT_906015 [ | 0.95 | 0.979 | 0.68 | 8e-29 | |
| 388499750 | 95 | unknown [Medicago truncatula] | 0.93 | 0.978 | 0.642 | 4e-26 | |
| 18424606 | 99 | uncharacterized protein [Arabidopsis tha | 0.9 | 0.909 | 0.652 | 3e-25 |
| >gi|359491609|ref|XP_002283556.2| PREDICTED: uncharacterized protein LOC100255301 [Vitis vinifera] gi|297733832|emb|CBI15079.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 88/103 (85%), Gaps = 4/103 (3%)
Query: 1 MAYLLKTSIA-SHLRSHTQEKREDA--LSRRGYHVELGPREKALLADDPVLKRFKSHKKS 57
MA+LL + A SH RSH+Q K ED+ LSRRG+HVE GPREKALLAD+P LKRFKSHK++
Sbjct: 1 MAFLLNKATALSHFRSHSQ-KTEDSFSLSRRGFHVEPGPREKALLADNPSLKRFKSHKRN 59
Query: 58 VWRLKRMGDVLTIVVVAGCCYEIYVKAVMREEARRQARGTESA 100
VWRLKR+GDVLTIVVVAGCCYEIYVKAVMREEAR+QA E A
Sbjct: 60 VWRLKRVGDVLTIVVVAGCCYEIYVKAVMREEARKQAAANEIA 102
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224119246|ref|XP_002318023.1| predicted protein [Populus trichocarpa] gi|222858696|gb|EEE96243.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|118482384|gb|ABK93115.1| unknown [Populus trichocarpa] gi|118489648|gb|ABK96625.1| unknown [Populus trichocarpa x Populus deltoides] | Back alignment and taxonomy information |
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| >gi|224133448|ref|XP_002321570.1| predicted protein [Populus trichocarpa] gi|222868566|gb|EEF05697.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449440710|ref|XP_004138127.1| PREDICTED: uncharacterized protein LOC101212374 isoform 1 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449440712|ref|XP_004138128.1| PREDICTED: uncharacterized protein LOC101212374 isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255540773|ref|XP_002511451.1| conserved hypothetical protein [Ricinus communis] gi|223550566|gb|EEF52053.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|297815972|ref|XP_002875869.1| hypothetical protein ARALYDRAFT_906015 [Arabidopsis lyrata subsp. lyrata] gi|297321707|gb|EFH52128.1| hypothetical protein ARALYDRAFT_906015 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|388499750|gb|AFK37941.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|18424606|ref|NP_568957.1| uncharacterized protein [Arabidopsis thaliana] gi|21592610|gb|AAM64559.1| unknown [Arabidopsis thaliana] gi|332010243|gb|AED97626.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 100 | ||||||
| TAIR|locus:505006710 | 100 | SDH7 "AT5G62575" [Arabidopsis | 0.9 | 0.9 | 0.720 | 2.1e-29 | |
| TAIR|locus:505006388 | 93 | SDH7 "AT3G47833" [Arabidopsis | 0.89 | 0.956 | 0.720 | 1.9e-28 |
| TAIR|locus:505006710 SDH7 "AT5G62575" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 67/93 (72%), Positives = 79/93 (84%)
Query: 1 MAYLLKT-SIASHLRSHTQEKREDALS--RRGYHVELGPREKALLADDPVLKRFKSHKKS 57
MA+LL SI+SHLRS + +K DALS RRG+H+E G REKALLA+D LKRFKSHKKS
Sbjct: 1 MAFLLNNASISSHLRSSSSQKTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKS 60
Query: 58 VWRLKRMGDVLTIVVVAGCCYEIYVKAVMREEA 90
V +LKR+GDVLT+VVVAGCCYEIYVKAVM++EA
Sbjct: 61 VHKLKRIGDVLTVVVVAGCCYEIYVKAVMKKEA 93
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| TAIR|locus:505006388 SDH7 "AT3G47833" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00016151001 | SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (102 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00