Citrus Sinensis ID: 034452

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90----
Protein Sequence
MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITLKPPPPQPLAVAAAAES
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHcccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHcccEEEccEEEEccccccEEEEEccccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHcccEEEccEEEEccccccEEEEEccccccHHHHHHHHcc
Coil and Loop (DISEMBL)
MNVEEEVERLKEEIQRLgkiqpdgsykvtfgvlfhddRCANIFEALVGTLRAAKKRKFLTYDGELLLqgvhdnveitlkppppqplavaAAAES
Flexible Loop (DISEMBL)
MNVEEEVERLKEEIqrlgkiqpdgsYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEItlkppppqpLAVAAAAES
Low Complexity Region (SEG)
MNVeeeverlkeeIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITLKppppqplavaaaaES
Disordered region (IsUnstruct)
*******************IQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEI******************
Disordered Region (DISOPRED)
*NVEEEVERLKEEIQRLG******SYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITLKPPPPQP**VA*****
Disordered Region (DISEMBL)
***********EEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITLKPPPPQ**********
Disordered Region (DISPRO)
MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITLKPPPP****V******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITLKPPPPQPLAVAAAAES
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	94	2.2.26 [Sep-21-2011]
Q6AVK1	87	Costars family protein OS	yes	no	0.925	1.0	0.835	7e-37
A2XKU9	87	Costars family protein OS	N/A	no	0.925	1.0	0.835	7e-37
A9NK39	95	Costars family protein WS	N/A	no	0.893	0.884	0.809	1e-33
Q8LBN7	95	Costars family protein At	yes	no	0.840	0.831	0.784	2e-31
B4YYA9	92	Costars family protein ST	N/A	no	0.978	1.0	0.782	3e-28
B5X8A5	81	Costars family protein AB	N/A	no	0.829	0.962	0.705	1e-25
Q4KML4	81	Costars family protein AB	yes	no	0.829	0.962	0.705	2e-25
A4IHJ3	81	Costars family protein AB	yes	no	0.829	0.962	0.705	2e-25
Q498C5	81	Costars family protein AB	N/A	no	0.829	0.962	0.692	3e-25
Q6TGV7	81	Costars family protein AB	yes	no	0.829	0.962	0.666	3e-25

>sp|Q6AVK1|COSA_ORYSJ Costars family protein OS=Oryza sativa subsp. japonica GN=Os03g0690000 PE=3 SV=1

 Score =  152 bits (383), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 76/91 (83%), Positives = 81/91 (89%), Gaps = 4/91 (4%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNVEEEV +LKEEIQRLG+ QPDGSYKVTFGV+F+DDRCANIFEALVGTLRAAKKRK + 
Sbjct: 1  MNVEEEVGKLKEEIQRLGQKQPDGSYKVTFGVIFNDDRCANIFEALVGTLRAAKKRKIVK 60

Query: 61 YDGELLLQGVHDNVEITLKPPPPQPLAVAAA 91
          YDGELLLQG HDNVEITL PPP    AVAAA
Sbjct: 61 YDGELLLQGAHDNVEITLLPPP----AVAAA 87

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2XKU9|COSA_ORYSI Costars family protein OS=Oryza sativa subsp. indica GN=OsI_012692 PE=3 SV=1

 Score =  152 bits (383), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 76/91 (83%), Positives = 81/91 (89%), Gaps = 4/91 (4%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNVEEEV +LKEEIQRLG+ QPDGSYKVTFGV+F+DDRCANIFEALVGTLRAAKKRK + 
Sbjct: 1  MNVEEEVGKLKEEIQRLGQKQPDGSYKVTFGVIFNDDRCANIFEALVGTLRAAKKRKIVK 60

Query: 61 YDGELLLQGVHDNVEITLKPPPPQPLAVAAA 91
          YDGELLLQG HDNVEITL PPP    AVAAA
Sbjct: 61 YDGELLLQGAHDNVEITLLPPP----AVAAA 87

Oryza sativa subsp. indica (taxid: 39946)

>sp|A9NK39|COSA_PICSI Costars family protein WS02710_H03 OS=Picea sitchensis PE=3 SV=1

 Score =  141 bits (355), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/84 (80%), Positives = 74/84 (88%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          +NV+EEVERLKEEI+RL + +PDGSY V FGVLF DDRCANIFEALVGTLRAAKKRK +T
Sbjct: 3  LNVDEEVERLKEEIKRLAQPRPDGSYVVKFGVLFSDDRCANIFEALVGTLRAAKKRKVVT 62

Query: 61 YDGELLLQGVHDNVEITLKPPPPQ 84
          YDGELLLQGVHDNVEI L  PP Q
Sbjct: 63 YDGELLLQGVHDNVEIVLLKPPTQ 86

Picea sitchensis (taxid: 3332)

>sp|Q8LBN7|COSA_ARATH Costars family protein At4g33640 OS=Arabidopsis thaliana GN=At4g33640 PE=3 SV=1

 Score =  134 bits (337), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 62/79 (78%), Positives = 72/79 (91%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNV+EE+++L+EEI RLG  Q DGSYKVTFGVLF+DDRCANIFEALVGTLRAAKKRK + 
Sbjct: 1  MNVDEEIQKLEEEIHRLGSRQTDGSYKVTFGVLFNDDRCANIFEALVGTLRAAKKRKIVA 60

Query: 61 YDGELLLQGVHDNVEITLK 79
          ++GELLLQGVHD VEITL+
Sbjct: 61 FEGELLLQGVHDKVEITLR 79

Arabidopsis thaliana (taxid: 3702)

>sp|B4YYA9|COSA_THEHA Costars family protein ST45-2 OS=Thellungiella halophila PE=3 SV=1

 Score =  123 bits (309), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/92 (78%), Positives = 82/92 (89%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNVEEE+++L+EEI RLG +Q DGSYKVTFGVLF+DDRCANIFEALVGTLRAAKKRK + 
Sbjct: 1  MNVEEEIQKLEEEIHRLGSLQSDGSYKVTFGVLFNDDRCANIFEALVGTLRAAKKRKIVA 60

Query: 61 YDGELLLQGVHDNVEITLKPPPPQPLAVAAAA 92
          + GELLLQGVHD VEITL+PPPP P AVAA +
Sbjct: 61 FPGELLLQGVHDKVEITLRPPPPPPQAVAATS 92

Thellungiella halophila (taxid: 98038)

>sp|B5X8A5|ABRAL_SALSA Costars family protein ABRACL OS=Salmo salar PE=3 SV=1

 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/78 (70%), Positives = 63/78 (80%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNV+ EV  L  EIQRLG    DG   V FGVLF+DDRCANIFEALVGTLRAAK++K + 
Sbjct: 1  MNVQHEVSLLVGEIQRLGSKNADGQTCVKFGVLFNDDRCANIFEALVGTLRAAKRKKIIA 60

Query: 61 YDGELLLQGVHDNVEITL 78
          ++GELLLQGVHDNV+ITL
Sbjct: 61 FEGELLLQGVHDNVDITL 78

Salmo salar (taxid: 8030)

>sp|Q4KML4|ABRAL_MOUSE Costars family protein ABRACL OS=Mus musculus GN=Abracl PE=3 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/78 (70%), Positives = 61/78 (78%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNVE EV  L EEI RLG    DG   V FGVLF DDRCAN+FEALVGTL+AAK+RK +T
Sbjct: 1  MNVEHEVNLLVEEIHRLGSKNADGKLSVKFGVLFQDDRCANLFEALVGTLKAAKRRKIVT 60

Query: 61 YDGELLLQGVHDNVEITL 78
          Y GELLLQGVHD+V+I L
Sbjct: 61 YAGELLLQGVHDDVDIVL 78

Mus musculus (taxid: 10090)

>sp|A4IHJ3|ABRAL_XENTR Costars family protein ABRACL OS=Xenopus tropicalis GN=abracl PE=3 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/78 (70%), Positives = 62/78 (79%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNV+ EV  L EEI+RLG    DG   V FGVLF DD+CAN+FEALVGTL+AAKKRK +T
Sbjct: 1  MNVDHEVNLLVEEIRRLGSKGNDGKLSVKFGVLFSDDKCANLFEALVGTLKAAKKRKIVT 60

Query: 61 YDGELLLQGVHDNVEITL 78
          Y GELLLQGVHDNV+I L
Sbjct: 61 YQGELLLQGVHDNVDIVL 78

Xenopus tropicalis (taxid: 8364)

>sp|Q498C5|ABRAL_XENLA Costars family protein ABRACL OS=Xenopus laevis GN=abracl PE=3 SV=1

 Score =  113 bits (283), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/78 (69%), Positives = 62/78 (79%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNV+ EV  L  EI+RLG    DG + V FGVLF DD+CAN+FEALVGTL+AAKKRK +T
Sbjct: 1  MNVDHEVNLLVGEIRRLGSKGNDGKFSVKFGVLFSDDKCANLFEALVGTLKAAKKRKIIT 60

Query: 61 YDGELLLQGVHDNVEITL 78
          Y GELLLQGVHDNV+I L
Sbjct: 61 YQGELLLQGVHDNVDIVL 78

Xenopus laevis (taxid: 8355)

>sp|Q6TGV7|ABRAL_DANRE Costars family protein ABRACL OS=Danio rerio GN=abracl PE=3 SV=1

 Score =  113 bits (283), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 52/78 (66%), Positives = 64/78 (82%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNVE EV  L +EI+RLG    DG   V FGVLF+DD+CAN+FEALVGTL+AAK++K +T
Sbjct: 1  MNVEHEVSLLIDEIRRLGSKNADGKTSVKFGVLFNDDQCANLFEALVGTLKAAKRKKVIT 60

Query: 61 YDGELLLQGVHDNVEITL 78
          +DGELLLQGVHDNV++ L
Sbjct: 61 FDGELLLQGVHDNVDVVL 78

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
224093270	96	predicted protein [Populus trichocarpa]	0.872	0.854	0.926	2e-37
242038495	87	hypothetical protein SORBIDRAFT_01g01153	0.925	1.0	0.868	3e-36
124359393	158	Protein C6orf115, putative [Medicago tru	0.872	0.518	0.878	4e-36
357445991	150	hypothetical protein MTR_2g009660 [Medic	0.936	0.586	0.808	5e-36
388520589	88	unknown [Medicago truncatula]	0.872	0.931	0.878	2e-35
195618412	87	hypothetical protein [Zea mays] gi|19562	0.925	1.0	0.857	2e-35
115454699	87	Os03g0690000 [Oryza sativa Japonica Grou	0.925	1.0	0.835	3e-35
225464081	86	PREDICTED: costars family protein [Vitis	0.872	0.953	0.890	4e-35
356524796	91	PREDICTED: costars family protein-like [	0.829	0.857	0.858	1e-32
356521245	90	PREDICTED: costars family protein-like [	0.829	0.866	0.858	1e-32

>gi|224093270|ref|XP_002309860.1| predicted protein [Populus trichocarpa] gi|222852763|gb|EEE90310.1| predicted protein [Populus trichocarpa]

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 76/82 (92%), Positives = 78/82 (95%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNVEEEV RLKEEIQRLGK+QPDGSYKVTFGVLF+DDRCANIFEALVGTLRAAKKRKFLT
Sbjct: 1  MNVEEEVGRLKEEIQRLGKVQPDGSYKVTFGVLFNDDRCANIFEALVGTLRAAKKRKFLT 60

Query: 61 YDGELLLQGVHDNVEITLKPPP 82
          YDGELLLQGVHDNVEI LK  P
Sbjct: 61 YDGELLLQGVHDNVEIILKAAP 82

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242038495|ref|XP_002466642.1| hypothetical protein SORBIDRAFT_01g011530 [Sorghum bicolor] gi|241920496|gb|EER93640.1| hypothetical protein SORBIDRAFT_01g011530 [Sorghum bicolor]

 Score =  155 bits (392), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/91 (86%), Positives = 82/91 (90%), Gaps = 4/91 (4%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNVEEEV +LKEEIQRLG+ QPDGSYKV FGVLF+DDRCANIFEALVGTLRAAKKRK LT
Sbjct: 1  MNVEEEVGKLKEEIQRLGQQQPDGSYKVKFGVLFNDDRCANIFEALVGTLRAAKKRKVLT 60

Query: 61 YDGELLLQGVHDNVEITLKPPPPQPLAVAAA 91
          YDGELLLQGVHDNVEITL PPP    AVAAA
Sbjct: 61 YDGELLLQGVHDNVEITLLPPP----AVAAA 87

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|124359393|gb|ABD28547.2| Protein C6orf115, putative [Medicago truncatula]

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 72/82 (87%), Positives = 76/82 (92%)

Query: 1   MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
           MNVEEEV RLKEEI+RLGK+Q DGSYKVTFG LFHDD+CANIFEALVGTLRAAKKRK LT
Sbjct: 71  MNVEEEVGRLKEEIKRLGKLQSDGSYKVTFGTLFHDDQCANIFEALVGTLRAAKKRKVLT 130

Query: 61  YDGELLLQGVHDNVEITLKPPP 82
           Y+GELLLQGVHDNVEITL P P
Sbjct: 131 YEGELLLQGVHDNVEITLNPTP 152

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445991|ref|XP_003593273.1| hypothetical protein MTR_2g009660 [Medicago truncatula] gi|355482321|gb|AES63524.1| hypothetical protein MTR_2g009660 [Medicago truncatula]

 Score =  154 bits (390), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 76/94 (80%), Positives = 81/94 (86%), Gaps = 6/94 (6%)

Query: 1   MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
           MNVEEEV RLKEEI+RLGK+Q DGSYKVTFG LFHDD+CANIFEALVGTLRAAKKRK LT
Sbjct: 63  MNVEEEVGRLKEEIKRLGKLQSDGSYKVTFGTLFHDDQCANIFEALVGTLRAAKKRKVLT 122

Query: 61  YDGELLLQGVHDNVEITLKPPPPQPLAVAAAAES 94
           Y+GELLLQGVHDNVEITL P P      AAAA +
Sbjct: 123 YEGELLLQGVHDNVEITLNPTP------AAAASN 150

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520589|gb|AFK48356.1| unknown [Medicago truncatula]

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/82 (87%), Positives = 76/82 (92%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNVEEEV RLKEEI+RLGK+Q DGSYKVTFG LFHDD+CANIFEALVGTLRAAKKRK LT
Sbjct: 1  MNVEEEVGRLKEEIKRLGKLQSDGSYKVTFGTLFHDDQCANIFEALVGTLRAAKKRKVLT 60

Query: 61 YDGELLLQGVHDNVEITLKPPP 82
          Y+GELLLQGVHDNVEITL P P
Sbjct: 61 YEGELLLQGVHDNVEITLNPTP 82

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195618412|gb|ACG31036.1| hypothetical protein [Zea mays] gi|195623596|gb|ACG33628.1| hypothetical protein [Zea mays] gi|414872201|tpg|DAA50758.1| TPA: hypothetical protein ZEAMMB73_943086 [Zea mays]

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/91 (85%), Positives = 81/91 (89%), Gaps = 4/91 (4%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNVEEEV RLKEEI RLG+ QPDGSYKV FGVLF+DDRCANIFEALVGTLRAAKKRK LT
Sbjct: 1  MNVEEEVGRLKEEIHRLGQQQPDGSYKVKFGVLFNDDRCANIFEALVGTLRAAKKRKILT 60

Query: 61 YDGELLLQGVHDNVEITLKPPPPQPLAVAAA 91
          Y+GELLLQGVHDNVEITL PPP    AVAAA
Sbjct: 61 YEGELLLQGVHDNVEITLLPPP----AVAAA 87

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115454699|ref|NP_001050950.1| Os03g0690000 [Oryza sativa Japonica Group] gi|75120259|sp|Q6AVK1.1|COSA_ORYSJ RecName: Full=Costars family protein gi|224493392|sp|A2XKU9.1|COSA_ORYSI RecName: Full=Costars family protein gi|50838962|gb|AAT81723.1| striated muscle activator-like protein [Oryza sativa Japonica Group] gi|108710488|gb|ABF98283.1| expressed protein [Oryza sativa Japonica Group] gi|113549421|dbj|BAF12864.1| Os03g0690000 [Oryza sativa Japonica Group] gi|125545320|gb|EAY91459.1| hypothetical protein OsI_13088 [Oryza sativa Indica Group] gi|125587533|gb|EAZ28197.1| hypothetical protein OsJ_12170 [Oryza sativa Japonica Group] gi|215693013|dbj|BAG88433.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 76/91 (83%), Positives = 81/91 (89%), Gaps = 4/91 (4%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNVEEEV +LKEEIQRLG+ QPDGSYKVTFGV+F+DDRCANIFEALVGTLRAAKKRK + 
Sbjct: 1  MNVEEEVGKLKEEIQRLGQKQPDGSYKVTFGVIFNDDRCANIFEALVGTLRAAKKRKIVK 60

Query: 61 YDGELLLQGVHDNVEITLKPPPPQPLAVAAA 91
          YDGELLLQG HDNVEITL PPP    AVAAA
Sbjct: 61 YDGELLLQGAHDNVEITLLPPP----AVAAA 87

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464081|ref|XP_002270515.1| PREDICTED: costars family protein [Vitis vinifera] gi|296088779|emb|CBI38229.3| unnamed protein product [Vitis vinifera]

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 73/82 (89%), Positives = 75/82 (91%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNVEEEV RLKEEI RLGKIQ DGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRK + 
Sbjct: 1  MNVEEEVGRLKEEITRLGKIQDDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKVVA 60

Query: 61 YDGELLLQGVHDNVEITLKPPP 82
          Y+GELLLQGVHDNVEI LKP P
Sbjct: 61 YEGELLLQGVHDNVEIVLKPTP 82

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524796|ref|XP_003531014.1| PREDICTED: costars family protein-like [Glycine max]

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/78 (85%), Positives = 73/78 (93%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNVEEEV+RL +EI+RLGK+Q DGSYKVTFG LF+DD CANIFEALVGTLRAAKKRK LT
Sbjct: 1  MNVEEEVQRLSQEIKRLGKVQADGSYKVTFGTLFNDDECANIFEALVGTLRAAKKRKVLT 60

Query: 61 YDGELLLQGVHDNVEITL 78
          Y+GELLLQGVHDNVEITL
Sbjct: 61 YEGELLLQGVHDNVEITL 78

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521245|ref|XP_003529267.1| PREDICTED: costars family protein-like [Glycine max]

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/78 (85%), Positives = 73/78 (93%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNVEEEV+RL +EI+RLGK+Q DGSYKVTFG LF+DD CANIFEALVGTLRAAKKRK LT
Sbjct: 1  MNVEEEVQRLSQEIKRLGKVQADGSYKVTFGTLFNDDECANIFEALVGTLRAAKKRKVLT 60

Query: 61 YDGELLLQGVHDNVEITL 78
          Y+GELLLQGVHDNVEITL
Sbjct: 61 YEGELLLQGVHDNVEITL 78

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
TAIR|locus:2134183	95	AT4G33640 "AT4G33640" [Arabido	0.840	0.831	0.721	9.7e-25
MGI|MGI:1920362	81	Abracl "ABRA C-terminal like"	0.829	0.962	0.628	2.1e-20
DICTYBASE|DDB_G0272861	82	cosA "actin regulatory protein	0.691	0.792	0.615	1.1e-16
ZFIN|ZDB-GENE-040822-7	359	abrab "actin-binding Rho activ	0.670	0.175	0.430	1.8e-06
RGD|708493	375	Abra "actin-binding Rho activa	0.670	0.168	0.415	2.4e-06
MGI|MGI:2444891	375	Abra "actin-binding Rho activa	0.670	0.168	0.415	3.2e-06
UNIPROTKB|E1BCX2	382	ABRA "Uncharacterized protein"	0.670	0.164	0.415	3.3e-06
WB|WBGene00009475	162	F36F2.1b.2 [Caenorhabditis ele	0.670	0.388	0.393	4.3e-06
UNIPROTKB|E2RSB2	380	ABRA "Uncharacterized protein"	0.670	0.165	0.415	6.8e-06
UNIPROTKB|B5SNZ6	384	ABRA "Actin-binding Rho-activa	0.670	0.164	0.415	6.9e-06

TAIR|locus:2134183 AT4G33640 "AT4G33640" [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 57/79 (72%), Positives = 62/79 (78%)

Query:     1 MNVXXXXXXXXXXIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
             MNV          I RLG  Q DGSYKVTFGVLF+DDRCANIFEALVGTLRAAKKRK + 
Sbjct:     1 MNVDEEIQKLEEEIHRLGSRQTDGSYKVTFGVLFNDDRCANIFEALVGTLRAAKKRKIVA 60

Query:    61 YDGELLLQGVHDNVEITLK 79
             ++GELLLQGVHD VEITL+
Sbjct:    61 FEGELLLQGVHDKVEITLR 79

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0007030 "Golgi organization" evidence=RCA

GO:0007033 "vacuole organization" evidence=RCA

MGI|MGI:1920362 Abracl "ABRA C-terminal like" [Mus musculus (taxid:10090)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 49/78 (62%), Positives = 55/78 (70%)

Query:     1 MNVXXXXXXXXXXIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
             MNV          I RLG    DG   V FGVLF DDRCAN+FEALVGTL+AAK+RK +T
Sbjct:     1 MNVEHEVNLLVEEIHRLGSKNADGKLSVKFGVLFQDDRCANLFEALVGTLKAAKRRKIVT 60

Query:    61 YDGELLLQGVHDNVEITL 78
             Y GELLLQGVHD+V+I L
Sbjct:    61 YAGELLLQGVHDDVDIVL 78

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0272861 cosA "actin regulatory protein costars" [Dictyostelium discoideum (taxid:44689)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 40/65 (61%), Positives = 50/65 (76%)

Query:    14 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDN 73
             I++LG    DG Y V +GVLF+DD  AN FEALVGTL+AAKKR  +T+ GE+LLQ VHDN
Sbjct:    14 IKKLGTKGADGKYSVKYGVLFNDDDVANFFEALVGTLKAAKKRGIITFQGEILLQRVHDN 73

Query:    74 VEITL 78
             V++ L
Sbjct:    74 VDVIL 78

GO:2000145 "regulation of cell motility" evidence=IDA

GO:0032970 "regulation of actin filament-based process" evidence=IDA

GO:0031288 "sorocarp morphogenesis" evidence=IMP

GO:0031143 "pseudopodium" evidence=IDA

GO:0044351 "macropinocytosis" evidence=RCA

ZFIN|ZDB-GENE-040822-7 abrab "actin-binding Rho activating protein b" [Danio rerio (taxid:7955)]

 Score = 117 (46.2 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 28/65 (43%), Positives = 39/65 (60%)

Query:    14 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDN 73
             I+ +    PDG  +VTFG LF  DR   I + +VG L  A+K   + ++GE+L QG  D+
Sbjct:   295 IRTMADPDPDGYTRVTFGELF--DRYVRISDKVVGILMRARKHGKVAFEGEMLWQGQDDD 352

Query:    74 VEITL 78
             V ITL
Sbjct:   353 VIITL 357

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

RGD|708493 Abra "actin-binding Rho activating protein" [Rattus norvegicus (taxid:10116)]

 Score = 116 (45.9 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 27/65 (41%), Positives = 40/65 (61%)

Query:    14 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDN 73
             I+ + + + DG  +VTFG LF  DR   I + +VG L  A+K   + ++GE+L QG  D+
Sbjct:   311 IRTMARHRRDGKIQVTFGELF--DRYVRISDKVVGILMRARKHGLVHFEGEMLWQGKDDH 368

Query:    74 VEITL 78
             V ITL
Sbjct:   369 VVITL 373

GO:0000060 "protein import into nucleus, translocation" evidence=IEA;ISO

GO:0003713 "transcription coactivator activity" evidence=IEA;ISO

GO:0003779 "actin binding" evidence=ISO;ISS

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=ISO;ISS

GO:0030016 "myofibril" evidence=ISO

GO:0030017 "sarcomere" evidence=IDA

GO:0035025 "positive regulation of Rho protein signal transduction" evidence=ISO;ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=ISO;ISS

MGI|MGI:2444891 Abra "actin-binding Rho activating protein" [Mus musculus (taxid:10090)]

 Score = 115 (45.5 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 27/65 (41%), Positives = 40/65 (61%)

Query:    14 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDN 73
             I+ + + + DG  +VTFG LF  DR   I + +VG L  A+K   + ++GE+L QG  D+
Sbjct:   311 IRTMARHRRDGKIQVTFGELF--DRYVRISDKVVGILMRARKHGLVHFEGEMLWQGRDDH 368

Query:    74 VEITL 78
             V ITL
Sbjct:   369 VVITL 373

GO:0000060 "protein import into nucleus, translocation" evidence=IDA

GO:0003713 "transcription coactivator activity" evidence=IDA

GO:0003779 "actin binding" evidence=IDA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IDA

GO:0030016 "myofibril" evidence=IDA

GO:0030017 "sarcomere" evidence=ISO

GO:0035025 "positive regulation of Rho protein signal transduction" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI;IDA

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IDA

UNIPROTKB|E1BCX2 ABRA "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 115 (45.5 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 27/65 (41%), Positives = 40/65 (61%)

Query:    14 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDN 73
             I+ + + + DG  +VTFG LF  DR   I + +VG L  A+K   + ++GE+L QG  D+
Sbjct:   318 IRSMARHRRDGKIQVTFGDLF--DRYVRISDKVVGILMRARKHGLVDFEGEMLWQGRDDH 375

Query:    74 VEITL 78
             V ITL
Sbjct:   376 VVITL 380

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0035025 "positive regulation of Rho protein signal transduction" evidence=IEA

GO:0030016 "myofibril" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0003713 "transcription coactivator activity" evidence=IEA

GO:0000060 "protein import into nucleus, translocation" evidence=IEA

WB|WBGene00009475 F36F2.1b.2 [Caenorhabditis elegans (taxid:6239)]

 Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 26/66 (39%), Positives = 40/66 (60%)

Query:    14 IQRLGKIQPDGS-YKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHD 72
             ++  GK + +G   ++TFG LF      NI + +VGTL  A+K K + ++GE+L Q   D
Sbjct:    78 VEDYGKQEKEGDPIRITFGRLF--TIYVNISDKVVGTLLRARKHKMIDFEGEMLFQKRDD 135

Query:    73 NVEITL 78
             +V ITL
Sbjct:   136 HVIITL 141

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB|E2RSB2 ABRA "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 112 (44.5 bits), Expect = 6.8e-06, P = 6.8e-06
 Identities = 27/65 (41%), Positives = 39/65 (60%)

Query:    14 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDN 73
             I+ +   + DG  +VTFG LF  DR   I + +VG L  A+K   + ++GE+L QG  D+
Sbjct:   316 IRTMAHQRRDGKIQVTFGDLF--DRYVRISDKVVGILMRARKHGLVDFEGEMLWQGRDDH 373

Query:    74 VEITL 78
             V ITL
Sbjct:   374 VVITL 378

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0035025 "positive regulation of Rho protein signal transduction" evidence=IEA

GO:0030016 "myofibril" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0003713 "transcription coactivator activity" evidence=IEA

GO:0000060 "protein import into nucleus, translocation" evidence=IEA

UNIPROTKB|B5SNZ6 ABRA "Actin-binding Rho-activating protein" [Sus scrofa (taxid:9823)]

 Score = 112 (44.5 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 27/65 (41%), Positives = 39/65 (60%)

Query:    14 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDN 73
             I+ +   + DG  +VTFG LF  DR   I + +VG L  A+K   + ++GE+L QG  D+
Sbjct:   320 IRTMAHPRRDGKIQVTFGDLF--DRYVRISDKVVGILMRARKHGLVDFEGEMLWQGRDDH 377

Query:    74 VEITL 78
             V ITL
Sbjct:   378 VVITL 382

GO:0030017 "sarcomere" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B5X8A5	ABRAL_SALSA	No assigned EC number	0.7051	0.8297	0.9629	N/A	no
Q6V289	ABRAL_COTCO	No assigned EC number	0.6794	0.8297	0.9629	N/A	no
B4YYA9	COSA_THEHA	No assigned EC number	0.7826	0.9787	1.0	N/A	no
A9NK39	COSA_PICSI	No assigned EC number	0.8095	0.8936	0.8842	N/A	no
Q6AVK1	COSA_ORYSJ	No assigned EC number	0.8351	0.9255	1.0	yes	no
Q558Y7	COSA_DICDI	No assigned EC number	0.5769	0.8297	0.9512	yes	no
Q6TGV7	ABRAL_DANRE	No assigned EC number	0.6666	0.8297	0.9629	yes	no
A7RHL5	COSA_NEMVE	No assigned EC number	0.6666	0.8297	0.9512	N/A	no
Q9P1F3	ABRAL_HUMAN	No assigned EC number	0.6794	0.8297	0.9629	yes	no
Q3ZBN0	ABRAL_BOVIN	No assigned EC number	0.6794	0.8297	0.9629	yes	no
Q8LBN7	COSA_ARATH	No assigned EC number	0.7848	0.8404	0.8315	yes	no
Q498C5	ABRAL_XENLA	No assigned EC number	0.6923	0.8297	0.9629	N/A	no
Q4KML4	ABRAL_MOUSE	No assigned EC number	0.7051	0.8297	0.9629	yes	no
A2XKU9	COSA_ORYSI	No assigned EC number	0.8351	0.9255	1.0	N/A	no
A4IHJ3	ABRAL_XENTR	No assigned EC number	0.7051	0.8297	0.9629	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_VII1182 hypothetical protein (96 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	94
PF14705	77	Costars: Costars; PDB: 2L2O_A 2KRH_A.	100.0
KOG3376	249	consensus Uncharacterized conserved protein [Funct	100.0

>PF14705 Costars: Costars; PDB: 2L2O_A 2KRH_A

Probab=100.00  E-value=4.3e-45  Score=243.24  Aligned_cols=77  Identities=57%  Similarity=0.880  Sum_probs=68.9

Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCceeeeeeccccccchhhHHHHHHHHHHHHHhcCceeecceeecccccCceEEEec
Q 034452            1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITLK   79 (94)
Q Consensus         1 m~V~~Ei~~L~~~I~~~G~~~~dG~~~V~FG~LF~~~~~~~i~e~LVGtL~~ArK~~lV~FeGEmL~Qg~dD~V~I~Ll   79 (94)
                      |||++||++||++|+++|++++||+++||||+||  ++|+||||||||||+||||||+|+|+|||||||+||||+||||
T Consensus         1 ~~V~~EI~~L~~~I~~~G~~~~~g~~~V~FG~LF--~~~~~i~eaLvG~L~~ArK~~~V~FeGE~L~Qg~dD~V~I~LL   77 (77)
T PF14705_consen    1 MHVDREILELCEIIKRLGTKDADGKYSVTFGVLF--ERYANISEALVGTLLRARKHKLVDFEGEMLLQGRDDDVDITLL   77 (77)
T ss_dssp             -GCHCCCHHHHHHHHHH-CCGCTSSEEEEHHHHH--HHHCTTTTTHHHHHHHHHCTTSEE-SSS--STCCCTT-EEEE-
T ss_pred             CcHHHHHHHHHHHHHHhCCCCCCCCEeeehhHHH--HHHHHHHHHHHHHHHHHHhcCceeeccceecCCCCCCEeEEeC
Confidence            8999999999999999999999999999999999  5889999999999999999999999999999999999999997

>KOG3376 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1e-39  Score=254.25  Aligned_cols=91  Identities=45%  Similarity=0.614  Sum_probs=87.5

Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCC-ceeeeeeccccccchhhHHHHHHHHHHHHHhcCceeecceeecccccCceEEEec
Q 034452            1 MNVEEEVERLKEEIQRLGKIQPDG-SYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITLK   79 (94)
Q Consensus         1 m~V~~Ei~~L~~~I~~~G~~~~dG-~~~V~FG~LF~~~~~~~i~e~LVGtL~~ArK~~lV~FeGEmL~Qg~dD~V~I~Ll   79 (94)
                      |||++||+.||++|+++|.+..|| ++.|+||+||+||+|+||||||||||+||||||||+|+||||+||+||||+||||
T Consensus        77 ~hV~rEi~~L~E~I~s~g~~e~dg~k~~V~FGvLFn~y~csniseklVGtL~~Ark~kiV~feGEmL~Qr~~D~v~ItLl  156 (249)
T KOG3376|consen   77 MHVDREILGLCEEIHSEGSPEKDGKKKEVKFGVLFNIYECSNISEKLVGTLLRARKRKIVHFEGEMLLQRVDDDVIITLL  156 (249)
T ss_pred             cCccHHHHHHHHHHhhccCccCCCceeEEeeeEEeechhhhhhHHHHHHhhhhccccceeecccchhhcccccceeEEec
Confidence            899999999999999999999999 8999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCchhHhHhh
Q 034452           80 PPPPQPLAVAAA   91 (94)
Q Consensus        80 ~~~~~~~~~~~~   91 (94)
                      +++.++++.+.|
T Consensus       157 ~~~~~~~e~~ta  168 (249)
T KOG3376|consen  157 KSWREIREEPTA  168 (249)
T ss_pred             cCchhhhhhhhh
Confidence            999999975443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	94
2l2o_A	89	Solution Structure Of Human Hspc280 Protein Length		1e-20
2krh_A	85	Structure Of The C-Terminal Actin Binding Domain Of		1e-06

>pdb|2L2O|A Chain A, Solution Structure Of Human Hspc280 Protein Length = 89

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/78 (60%), Positives = 54/78 (69%)
Query: 1  MNVXXXXXXXXXXIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNV          I RLG    DG   V FGVLF DD+ AN+FEALVGTL+AAK+RK +T
Sbjct: 1  MNVDHEVNLLVEEIHRLGSKNADGKLSVKFGVLFRDDKSANLFEALVGTLKAAKRRKIVT 60
Query: 61 YDGELLLQGVHDNVEITL 78
          Y GELLLQGVHD+V+I L
Sbjct: 61 YPGELLLQGVHDDVDIIL 78

>pdb|2KRH|A Chain A, Structure Of The C-Terminal Actin Binding Domain Of Abra Length = 85

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 14 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDN 73
          I+ + + + DG  +VTFG LF  DR   I + +VG L  A+K   + ++GE+L QG  D+
Sbjct: 21 IRTMARHRRDGKIQVTFGELF--DRYVRISDKVVGILMRARKHGLVHFEGEMLWQGKDDH 78
Query: 74 VEITL 78
          V ITL
Sbjct: 79 VVITL 83

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	94
2l2o_A	89	UPF0727 protein C6ORF115; HSPC280, winged helix, u	2e-40
2krh_A	85	Actin-binding RHO-activating protein; muscle, stre	8e-36
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04

>2l2o_A UPF0727 protein C6ORF115; HSPC280, winged helix, unknown function; NMR {Homo sapiens} Length = 89

 Score =  127 bits (320), Expect = 2e-40
 Identities = 52/84 (61%), Positives = 60/84 (71%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
          MNV+ EV  L EEI RLG    DG   V FGVLF DD+ AN+FEALVGTL+AAK+RK +T
Sbjct: 1  MNVDHEVNLLVEEIHRLGSKNADGKLSVKFGVLFRDDKSANLFEALVGTLKAAKRRKIVT 60

Query: 61 YDGELLLQGVHDNVEITLKPPPPQ 84
          Y GELLLQGVHD+V+I L      
Sbjct: 61 YPGELLLQGVHDDVDIILLQDLEH 84

>2krh_A Actin-binding RHO-activating protein; muscle, stress response, cardiac, actin-bindi cytoskeleton, actin-binding protein; NMR {Rattus norvegicus} Length = 85

 Score =  115 bits (290), Expect = 8e-36
 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)

Query: 1  MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
           ++  E+  L   I+ + + + DG  +VTFG LF  DR   I + +VG L  A+K   + 
Sbjct: 8  EHIYREIMELCFVIRTMARHRRDGKIQVTFGELF--DRYVRISDKVVGILMRARKHGLVH 65

Query: 61 YDGELLLQGVHDNVEITL 78
          ++GE+L QG  D+V ITL
Sbjct: 66 FEGEMLWQGKDDHVVITL 83

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 36.4 bits (83), Expect = 6e-04
 Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 40/124 (32%)

Query: 2   NVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRC-ANIFEA-------LVGT---- 49
           N++  +  ++ E++RL K +P   Y+    VL   +   A  + A       L+ T    
Sbjct: 222 NIKLRIHSIQAELRRLLKSKP---YENCLLVL--LNVQNAKAWNAFNLSCKILLTTRFKQ 276

Query: 50  ----LRAAKKRKF--------LTYDG--ELLLQGVHDNVEITLKPPPPQ-----PLAVAA 90
               L AA             LT D    LLL+ +    +  L   P +     P  ++ 
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ-DL---PREVLTTNPRRLSI 332

Query: 91  AAES 94
            AES
Sbjct: 333 IAES 336

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	94
2l2o_A	89	UPF0727 protein C6ORF115; HSPC280, winged helix, u	100.0
2krh_A	85	Actin-binding RHO-activating protein; muscle, stre	100.0

>2l2o_A UPF0727 protein C6ORF115; HSPC280, winged helix, unknown function; NMR {Homo sapiens}

Probab=100.00  E-value=9.2e-50  Score=271.39  Aligned_cols=84  Identities=62%  Similarity=0.944  Sum_probs=82.7

Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCceeeeeeccccccchhhHHHHHHHHHHHHHhcCceeecceeecccccCceEEEecC
Q 034452            1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITLKP   80 (94)
Q Consensus         1 m~V~~Ei~~L~~~I~~~G~~~~dG~~~V~FG~LF~~~~~~~i~e~LVGtL~~ArK~~lV~FeGEmL~Qg~dD~V~I~Ll~   80 (94)
                      |||++||.+||++|+++|++++||+++||||+||+|++|+||||||||||+||||||+|+|+|||||||+||||+||||+
T Consensus         1 m~V~~EI~~L~~~I~~~G~~~~dG~~~V~FG~LF~dd~~~ni~e~LVGtL~~ArK~k~V~FeGEmL~Qg~dD~V~ItLl~   80 (89)
T 2l2o_A            1 MNVDHEVNLLVEEIHRLGSKNADGKLSVKFGVLFRDDKSANLFEALVGTLKAAKRRKIVTYPGELLLQGVHDDVDIILLQ   80 (89)
T ss_dssp             CCHHHHHHHHHHHHHHHCEECTTSSEEEEHHHHHHHHHHHCCCTTHHHHHHHHHHTTSEECSCSCCSSGGGTTCEEEECS
T ss_pred             CCHHHHHHHHHHHHHHhCCCCCCCCEEEEeeeeecchHHhhHHHHHHHHHHHHHhcCceeeccceEeccCCCCeeEEEec
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCc
Q 034452           81 PPPQ   84 (94)
Q Consensus        81 ~~~~   84 (94)
                      |++.
T Consensus        81 ~~~~   84 (89)
T 2l2o_A           81 DLEH   84 (89)
T ss_dssp             CCCC
T ss_pred             Chhh
Confidence            9975

>2krh_A Actin-binding RHO-activating protein; muscle, stress response, cardiac, actin-bindi cytoskeleton, actin-binding protein; NMR {Rattus norvegicus}

Probab=100.00  E-value=2.2e-45  Score=248.03  Aligned_cols=77  Identities=38%  Similarity=0.595  Sum_probs=74.9

Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCceeeeeeccccccchhhHHHHHHHHHHHHHhcCceeecceeecccccCceEEEecC
Q 034452            2 NVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITLKP   80 (94)
Q Consensus         2 ~V~~Ei~~L~~~I~~~G~~~~dG~~~V~FG~LF~~~~~~~i~e~LVGtL~~ArK~~lV~FeGEmL~Qg~dD~V~I~Ll~   80 (94)
                      +|++||.+||++|+++|++++||+++||||+||  ++|+||||||||||+||||||+|+|+|||||||+||||+||||+
T Consensus         9 ~V~~Ei~~L~~~I~~~G~~~~dG~~~V~FG~LF--d~~~~i~e~lvGtL~~ArK~~~V~FeGEmL~Qg~dD~V~ItLL~   85 (85)
T 2krh_A            9 HIYREIMELCFVIRTMARHRRDGKIQVTFGELF--DRYVRISDKVVGILMRARKHGLVHFEGEMLWQGKDDHVVITLLE   85 (85)
T ss_dssp             GSCSTTHHHHHHHHHHCGGGGTSCCEEEHHHHH--HHHTTTTSCHHHHHHHHHTTSCBCCCSSCCCTTTSTTCEEEBCC
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCEEEEechHH--HHHHHHHHHHHHHHHHHHhcCceeecCceecccCCCCEEEEEeC
Confidence            689999999999999999999999999999999  58899999999999999999999999999999999999999986

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00