Citrus Sinensis ID: 034485

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90---
Protein Sequence
MASRYRALSKSTHFLLKSTLTKPTLKPNPLPSLLSTRSSPTFSRSVHQLGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQGMLCSANPGV
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHccHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEccccccc
Coil and Loop (DISEMBL)
masryralSKSTHFLLKstltkptlkpnplpsllstrssptfsrsvhQLGCLQSLLPLHSAVSSARLtsclgidstssrslsqgmlcsanpgv
Flexible Loop (DISEMBL)
masryralsksTHFLLKstltkptlkpnplpSLLSTRSSPTFSRSVHQLGCLQSLLPLHSAVSSARLTSCLGIDStssrslsqgmlcsanpgv
Low Complexity Region (SEG)
MASRYRALSKSTHFllkstltkptlkpnplpsllstrssptfsrsVHQLGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQGMLCSANPGV
Disordered region (IsUnstruct)
*********************************************VHQLGCLQSLLPLHSAVSSARLTSCLG*********************
Disordered Region (DISOPRED)
**********************************************HQLGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQGMLCSANPG*
Disordered Region (DISEMBL)
*********KSTHFLLKSTLTKPTLKPNPLPSLLSTRSSPTFSRSVHQLGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQGMLCSANPGV
Disordered Region (DISPRO)
*******LSKSTHFLLK**LT*****************SPTFSRSVHQLGCLQSLLPLHSAVSSARLTSCLG*********************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASRYRALSKSTHFLLKSTLTKPTLKPNPLPSLLSTRSSPTFSRSVHQLGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQGMLCSANPGV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	93
224092278	93	predicted protein [Populus trichocarpa]	1.0	1.0	0.774	2e-28
449436882	92	PREDICTED: uncharacterized protein LOC10	0.989	1.0	0.720	3e-25
388522663	93	unknown [Lotus japonicus]	1.0	1.0	0.731	4e-25
145357910	93	uncharacterized protein [Arabidopsis tha	1.0	1.0	0.623	4e-23
297807197	93	hypothetical protein ARALYDRAFT_909128 [	1.0	1.0	0.634	1e-22
118485054	91	unknown [Populus trichocarpa]	0.913	0.934	0.729	6e-22
357466675	93	hypothetical protein MTR_3g109720 [Medic	0.989	0.989	0.691	1e-21
356515617	93	PREDICTED: uncharacterized protein LOC10	0.903	0.903	0.670	3e-19
449436884	90	PREDICTED: uncharacterized protein LOC10	0.924	0.955	0.670	1e-18
356510033	91	PREDICTED: uncharacterized protein LOC10	0.903	0.923	0.662	8e-18

>gi|224092278|ref|XP_002309540.1| predicted protein [Populus trichocarpa] gi|222855516|gb|EEE93063.1| predicted protein [Populus trichocarpa]

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/93 (77%), Positives = 75/93 (80%)

Query: 1  MASRYRALSKSTHFLLKSTLTKPTLKPNPLPSLLSTRSSPTFSRSVHQLGCLQSLLPLHS 60
          MASRYR+LSK T  LLKST  KPTL+P   PSLL  R S TFSR V QLG +QSLLP HS
Sbjct: 1  MASRYRSLSKPTFSLLKSTTNKPTLQPKSTPSLLPARPSLTFSRPVPQLGAIQSLLPFHS 60

Query: 61 AVSSARLTSCLGIDSTSSRSLSQGMLCSANPGV 93
          AVSSARLTSCL IDS SSRSLSQGMLCSANPGV
Sbjct: 61 AVSSARLTSCLSIDSRSSRSLSQGMLCSANPGV 93

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436882|ref|XP_004136221.1| PREDICTED: uncharacterized protein LOC101217801 isoform 1 [Cucumis sativus] gi|449517239|ref|XP_004165653.1| PREDICTED: uncharacterized protein LOC101225552 isoform 1 [Cucumis sativus]

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/93 (72%), Positives = 76/93 (81%), Gaps = 1/93 (1%)

Query: 1  MASRYRALSKSTHFLLKSTLTKPTLKPNPLPSLLSTRSSPTFSRSVHQLGCLQSLLPLHS 60
          MASR+R+L+  +  L+KST+TKP++KP P  S  +  SSP  SRS  QLG LQSLLPLHS
Sbjct: 1  MASRFRSLATPSISLIKSTITKPSIKPRPAASF-TLCSSPALSRSFPQLGSLQSLLPLHS 59

Query: 61 AVSSARLTSCLGIDSTSSRSLSQGMLCSANPGV 93
          AVSSARLTSCLGIDS SSRSLSQGMLCSANPGV
Sbjct: 60 AVSSARLTSCLGIDSLSSRSLSQGMLCSANPGV 92

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388522663|gb|AFK49393.1| unknown [Lotus japonicus]

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/93 (73%), Positives = 77/93 (82%)

Query: 1  MASRYRALSKSTHFLLKSTLTKPTLKPNPLPSLLSTRSSPTFSRSVHQLGCLQSLLPLHS 60
          MASRYR+ S+    L+KST+TKPT  P P P L  TRSS + +RSV +LGC+QSLLPLHS
Sbjct: 1  MASRYRSFSQPAMSLIKSTITKPTTNPKPSPFLFKTRSSSSSTRSVAELGCVQSLLPLHS 60

Query: 61 AVSSARLTSCLGIDSTSSRSLSQGMLCSANPGV 93
          AVSSARLTSCLGIDS +SRSLSQGMLCSANPGV
Sbjct: 61 AVSSARLTSCLGIDSRTSRSLSQGMLCSANPGV 93

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145357910|ref|NP_196724.3| uncharacterized protein [Arabidopsis thaliana] gi|7573377|emb|CAB87681.1| putative protein [Arabidopsis thaliana] gi|332004320|gb|AED91703.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 58/93 (62%), Positives = 70/93 (75%)

Query: 1  MASRYRALSKSTHFLLKSTLTKPTLKPNPLPSLLSTRSSPTFSRSVHQLGCLQSLLPLHS 60
          MASR R+LSK      +S + KP+++P    S +    SP FSR + QLG LQSLLPL+S
Sbjct: 1  MASRCRSLSKPAFSAFRSAMNKPSIRPKSASSFIGVPPSPGFSRPIGQLGSLQSLLPLYS 60

Query: 61 AVSSARLTSCLGIDSTSSRSLSQGMLCSANPGV 93
          AV+SARLTSCLGIDS +SRSL+QGMLCSANPGV
Sbjct: 61 AVASARLTSCLGIDSQNSRSLAQGMLCSANPGV 93

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297807197|ref|XP_002871482.1| hypothetical protein ARALYDRAFT_909128 [Arabidopsis lyrata subsp. lyrata] gi|297317319|gb|EFH47741.1| hypothetical protein ARALYDRAFT_909128 [Arabidopsis lyrata subsp. lyrata]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 70/93 (75%)

Query: 1  MASRYRALSKSTHFLLKSTLTKPTLKPNPLPSLLSTRSSPTFSRSVHQLGCLQSLLPLHS 60
          MASR R+LSK    + +S + KP+L+P    S L    SP  SR + QLG LQSLLPL+S
Sbjct: 1  MASRCRSLSKPALSVFRSAMNKPSLRPKSASSFLGVPPSPGLSRPIAQLGSLQSLLPLYS 60

Query: 61 AVSSARLTSCLGIDSTSSRSLSQGMLCSANPGV 93
          AV+SARLTSCLGIDS +SRSL+QGMLCSANPGV
Sbjct: 61 AVASARLTSCLGIDSQNSRSLAQGMLCSANPGV 93

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118485054|gb|ABK94391.1| unknown [Populus trichocarpa]

 Score =  108 bits (269), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/85 (72%), Positives = 66/85 (77%)

Query: 1  MASRYRALSKSTHFLLKSTLTKPTLKPNPLPSLLSTRSSPTFSRSVHQLGCLQSLLPLHS 60
          MASRYR+LSK T  LLKST  KPTL+P   PSLL  R S TFSR V QLG +QSLLP HS
Sbjct: 1  MASRYRSLSKPTFSLLKSTTNKPTLQPKSTPSLLPARPSLTFSRPVPQLGAIQSLLPFHS 60

Query: 61 AVSSARLTSCLGIDSTSSRSLSQGM 85
          AVSSARLTSCL IDS SSRSLSQ +
Sbjct: 61 AVSSARLTSCLSIDSRSSRSLSQEL 85

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466675|ref|XP_003603622.1| hypothetical protein MTR_3g109720 [Medicago truncatula] gi|355492670|gb|AES73873.1| hypothetical protein MTR_3g109720 [Medicago truncatula]

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/94 (69%), Positives = 73/94 (77%), Gaps = 2/94 (2%)

Query: 1  MASRYRALSKSTHFLLKSTLTKPTLKPNPLPSLLS-TRSSPTFSRSVHQLGCLQSLLPLH 59
          MASRYR+ S+    L+KST+ KP    +     L  TR+S T  RSV +LGC+QSLLPLH
Sbjct: 1  MASRYRSFSQPAFSLIKSTINKPKSSSSSFSPFLLKTRTSVTV-RSVAELGCVQSLLPLH 59

Query: 60 SAVSSARLTSCLGIDSTSSRSLSQGMLCSANPGV 93
          SAVSSARLTSCLGIDSTSSRSLSQGMLCSANPGV
Sbjct: 60 SAVSSARLTSCLGIDSTSSRSLSQGMLCSANPGV 93

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515617|ref|XP_003526495.1| PREDICTED: uncharacterized protein LOC100796764 [Glycine max]

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/88 (67%), Positives = 67/88 (76%), Gaps = 4/88 (4%)

Query: 1  MASRYRALSKSTHFLLKSTLTKPTLKPNPLPSLLSTRSSPTFSRSVH---QLGCLQSLLP 57
          MASRYR++S+    L+KST+TKP  KP P   LL TRS P  +R V    +LGCLQSLLP
Sbjct: 1  MASRYRSVSQPAFSLIKSTITKPASKPVPSSFLLKTRS-PVTARQVRFGGKLGCLQSLLP 59

Query: 58 LHSAVSSARLTSCLGIDSTSSRSLSQGM 85
          LHSAVSSARLTSCLGIDS+ SRSLSQ M
Sbjct: 60 LHSAVSSARLTSCLGIDSSRSRSLSQEM 87

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436884|ref|XP_004136222.1| PREDICTED: uncharacterized protein LOC101217801 isoform 2 [Cucumis sativus] gi|449517241|ref|XP_004165654.1| PREDICTED: uncharacterized protein LOC101225552 isoform 2 [Cucumis sativus]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/88 (67%), Positives = 69/88 (78%), Gaps = 2/88 (2%)

Query: 1  MASRYRALSKSTHFLLKSTLTKPTLKPNPLPSLLSTRSSPTFSRSVHQLGCLQSLLPLHS 60
          MASR+R+L+  +  L+KST+TKP++KP P  S  +  SSP  SRS  QLG LQSLLPLHS
Sbjct: 1  MASRFRSLATPSISLIKSTITKPSIKPRPAASF-TLCSSPALSRSFPQLGSLQSLLPLHS 59

Query: 61 AVSSARLTSCLGIDSTSSRSLSQGM-LC 87
          AVSSARLTSCLGIDS SSRSLSQ + LC
Sbjct: 60 AVSSARLTSCLGIDSLSSRSLSQELGLC 87

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510033|ref|XP_003523745.1| PREDICTED: uncharacterized protein LOC100820535 [Glycine max]

 Score = 94.4 bits (233), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 57/86 (66%), Positives = 67/86 (77%), Gaps = 2/86 (2%)

Query: 1  MASRYRALSKSTHFLLKSTLTKPTLKPNPLPSLLSTRSSPTFSRSVH-QLGCLQSLLPLH 59
          MASRYR++S+    ++KST+TKP+ K  P   LL TRS P  +R V  +LGCLQSLLPLH
Sbjct: 1  MASRYRSVSQPAFSIIKSTITKPSSKLLPSSFLLKTRS-PVTARWVGGELGCLQSLLPLH 59

Query: 60 SAVSSARLTSCLGIDSTSSRSLSQGM 85
          SAVSSARLTSCLGIDS+ SRSLSQ M
Sbjct: 60 SAVSSARLTSCLGIDSSRSRSLSQEM 85

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	93
TAIR|locus:2181925	93	NOXY2 "AT5G11630" [Arabidopsis	0.516	0.516	0.833	3.4e-18
TAIR|locus:2130819	99	AT4G17310 [Arabidopsis thalian	0.473	0.444	0.681	2.2e-11
TAIR|locus:505006678	116	AT5G47455 "AT5G47455" [Arabido	0.387	0.310	0.694	2e-08
TAIR|locus:2136363	96	AT4G39300 "AT4G39300" [Arabido	0.397	0.385	0.513	8.1e-05
TAIR|locus:4010713552	103	AT1G55205 "AT1G55205" [Arabido	0.451	0.407	0.476	0.0001
TAIR|locus:505006558	94	AT4G34265 "AT4G34265" [Arabido	0.397	0.393	0.459	0.00093

TAIR|locus:2181925 NOXY2 "AT5G11630" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
 Identities = 40/48 (83%), Positives = 45/48 (93%)

Query:    46 VHQLGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQGMLCSANPGV 93
             + QLG LQSLLPL+SAV+SARLTSCLGIDS +SRSL+QGMLCSANPGV
Sbjct:    46 IGQLGSLQSLLPLYSAVASARLTSCLGIDSQNSRSLAQGMLCSANPGV 93

GO:0003674 "molecular_function" evidence=ND

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

GO:0048364 "root development" evidence=IMP

GO:0050832 "defense response to fungus" evidence=IMP

GO:0071433 "cell wall repair" evidence=IMP

TAIR|locus:2130819 AT4G17310 [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 30/44 (68%), Positives = 36/44 (81%)

Query:    48 QLGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQGMLCSANP 91
             +LGC+QSLLPLHS V++ARLTSCL   S SSR+LSQG LC  +P
Sbjct:    54 ELGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTLCCTSP 97

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:505006678 AT5G47455 "AT5G47455" [Arabidopsis thaliana (taxid:3702)]

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 25/36 (69%), Positives = 31/36 (86%)

Query:    48 QLGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQ 83
             +LGC+QSLLPLHS V++ARLTSCL   S SSR+L+Q
Sbjct:    63 ELGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQ 98

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2136363 AT4G39300 "AT4G39300" [Arabidopsis thaliana (taxid:3702)]

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 19/37 (51%), Positives = 28/37 (75%)

Query:    49 LGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQGM 85
             LG +++++PLHSAV+SARL S +  DS+    LSQG+
Sbjct:    56 LGSVETMIPLHSAVASARLRSSIAADSSCWSLLSQGL 92

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:4010713552 AT1G55205 "AT1G55205" [Arabidopsis thaliana (taxid:3702)]

 Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
 Identities = 20/42 (47%), Positives = 28/42 (66%)

Query:    48 QLGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQGMLCSA 89
             +L C  S+LPLHSA++SARL S L ++S S   + QG   S+
Sbjct:    56 ELSCCLSMLPLHSAIASARLISSLSVESKSWGLVPQGQSFSS 97

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006558 AT4G34265 "AT4G34265" [Arabidopsis thaliana (taxid:3702)]

 Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query:    48 QLGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQG 84
             +LGC +S LPL++ V++ARLTS L ++  +   LS G
Sbjct:    53 ELGCTESFLPLYNVVAAARLTSHLNVNLRAFCELSNG 89


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.125   0.361    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       93        62   0.00091  102 3  11 22  0.48    27
                                                     29  0.41    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  432 (46 KB)
  Total size of DFA:  74 KB (2062 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.01u 0.12s 7.13t   Elapsed:  00:00:01
  Total cpu time:  7.01u 0.12s 7.13t   Elapsed:  00:00:01
  Start:  Mon May 20 16:50:13 2013   End:  Mon May 20 16:50:14 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_VI000728 SubName- Full=Putative uncharacterized protein; (93 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00