Citrus Sinensis ID: 034893

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80
Protein Sequence
MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFLCIFIGFVILKSKKKKA
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MELADRVVGFLLSFISLSIFTYYTFWVIIlpfvdtdhfihqyflpqeyaiIIPVFAGVVLLCFLCIFIGFVILKSKKKKA
Flexible Loop (DISEMBL)
MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFLCIFIGfvilkskkkka
Low Complexity Region (SEG)
MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFLCIFIGFVILKSKKKKA
Disordered region (IsUnstruct)
****DRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFLCIFIGFVIL*******
Disordered Region (DISOPRED)
***ADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFLCIFIGFVI*KS*****
Disordered Region (DISEMBL)
MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFLCIFIGFVILKSKKKKA
Disordered Region (DISPRO)
*ELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFLCIFIGFVILKSK****
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFLCIFIGFVILKSKKKKA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	80	2.2.26 [Sep-21-2011]
Q2KIN1	84	Dolichol phosphate-mannos	yes	no	0.912	0.869	0.589	6e-18
Q9Z1P1	84	Dolichol phosphate-mannos	yes	no	0.962	0.916	0.569	2e-16
Q556K9	79	Dolichol phosphate-mannos	yes	no	0.987	1.0	0.481	2e-15
O94777	84	Dolichol phosphate-mannos	yes	no	0.95	0.904	0.576	2e-14
Q9Z324	84	Dolichol phosphate-mannos	yes	no	0.95	0.904	0.576	1e-12
Q9Z325	84	Dolichol phosphate-mannos	yes	no	0.95	0.904	0.576	1e-12
Q9USW6	72	Dolichol phosphate-mannos	yes	no	0.875	0.972	0.4	1e-09

>sp|Q2KIN1|DPM2_BOVIN Dolichol phosphate-mannose biosynthesis regulatory protein OS=Bos taurus GN=DPM2 PE=3 SV=3

 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 57/73 (78%)

Query: 5  DRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFL 64
          D+VVG  L  +SL IFTYYT WVI+LPF+D+ H IH+YFLP+ YAI IP+ AG +LL F+
Sbjct: 6  DQVVGLGLVALSLIIFTYYTAWVILLPFIDSQHVIHKYFLPRAYAIAIPLAAGHLLLLFV 65

Query: 65 CIFIGFVILKSKK 77
           IFI +V+LK++ 
Sbjct: 66 GIFITYVMLKNQN 78

Regulates the biosynthesis of dolichol phosphate-mannose. Essential for the ER localization and stable expression of DPM1.
Bos taurus (taxid: 9913)

>sp|Q9Z1P1|DPM2_CRIGR Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cricetulus griseus GN=DPM2 PE=3 SV=3

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/79 (56%), Positives = 63/79 (79%), Gaps = 2/79 (2%)

Query: 4  ADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCF 63
           D+VVGF L  +SL IFTYYT WVI+LPF+D+ H IH+YFLP+ YA++IP+  G++LL F
Sbjct: 5  TDQVVGFGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVLIPLATGLLLLLF 64

Query: 64 LCIFIGFVILKSKK--KKA 80
          + +FI +V+LKS++  KKA
Sbjct: 65 VGLFITYVMLKSRRLTKKA 83

Regulates the biosynthesis of dolichol phosphate-mannose. Essential for the ER localization and stable expression of DPM1.

Cricetulus griseus (taxid: 10029)

>sp|Q556K9|DPM2_DICDI Dolichol phosphate-mannose biosynthesis regulatory protein OS=Dictyostelium discoideum GN=dpm2-1 PE=3 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 55/79 (69%)

Query: 1  MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVL 60
          M  +D+ +GF++    + +F YYT WVII PF+ +DH+I QYFLP+EY IIIP+   VV 
Sbjct: 1  MGASDKFIGFVMVLFRIFVFGYYTTWVIITPFIVSDHWIQQYFLPREYGIIIPLVLLVVG 60

Query: 61 LCFLCIFIGFVILKSKKKK 79
          +  +  F+G V++KSKK K
Sbjct: 61 ITAIGTFLGLVMIKSKKNK 79

Regulates the biosynthesis of dolichol phosphate-mannose. Essential for the ER localization and stable expression of dpm1.

Dictyostelium discoideum (taxid: 44689)

>sp|O94777|DPM2_HUMAN Dolichol phosphate-mannose biosynthesis regulatory protein OS=Homo sapiens GN=DPM2 PE=1 SV=3

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 62/78 (79%), Gaps = 2/78 (2%)

Query: 5  DRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFL 64
          D+VVG  L  +SL IFTYYT WVI+LPF+D+ H IH+YFLP+ YA+ IP+ AG++LL F+
Sbjct: 6  DQVVGLGLVAVSLIIFTYYTAWVILLPFIDSQHVIHKYFLPRAYAVAIPLAAGLLLLLFV 65

Query: 65 CIFIGFVILKSKK--KKA 80
           +FI +V+LK+K+  KKA
Sbjct: 66 GLFISYVMLKTKRVTKKA 83

Regulates the biosynthesis of dolichol phosphate-mannose. Essential for the ER localization and stable expression of DPM1.

Homo sapiens (taxid: 9606)

>sp|Q9Z324|DPM2_MOUSE Dolichol phosphate-mannose biosynthesis regulatory protein OS=Mus musculus GN=Dpm2 PE=2 SV=3

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 63/78 (80%), Gaps = 2/78 (2%)

Query: 5  DRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFL 64
          D+ VGF L  +SL IFTYYT WVI+LPF+D+ H IH+YFLP+ YA+++P+ AG++LL F+
Sbjct: 6  DQAVGFGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVLLPLAAGLLLLLFV 65

Query: 65 CIFIGFVILKSKK--KKA 80
           +FI +V+LKS+K  KKA
Sbjct: 66 GLFITYVMLKSQKITKKA 83

Regulates the biosynthesis of dolichol phosphate-mannose. Essential for the ER localization and stable expression of DPM1.

Mus musculus (taxid: 10090)

>sp|Q9Z325|DPM2_RAT Dolichol phosphate-mannose biosynthesis regulatory protein OS=Rattus norvegicus GN=Dpm2 PE=3 SV=3

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 63/78 (80%), Gaps = 2/78 (2%)

Query: 5  DRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFL 64
          D+ VGF L  +SL IFTYYT WVI+LPF+D+ H IH+YFLP+ YA+++P+ AG++LL F+
Sbjct: 6  DQAVGFGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVLLPLAAGLLLLLFV 65

Query: 65 CIFIGFVILKSKK--KKA 80
           +FI +V+LKS+K  KKA
Sbjct: 66 GLFITYVLLKSQKVTKKA 83

Regulates the biosynthesis of dolichol phosphate-mannose. Essential for the ER localization and stable expression of DPM1.

Rattus norvegicus (taxid: 10116)

>sp|Q9USW6|DPM2_SCHPO Dolichol phosphate-mannose biosynthesis regulatory protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dpm2 PE=3 SV=1

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 46/70 (65%)

Query: 11 LLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFLCIFIGF 70
          ++ +IS + F YYT WV+I+PFVD  +   + FL +E+AI IPV   +  +C +  F+  
Sbjct: 1  MIVYISTAAFLYYTIWVLIMPFVDNMNISQKLFLDREWAITIPVAVMLFGICLIGTFVSL 60

Query: 71 VILKSKKKKA 80
          +++KS KKK+
Sbjct: 61 LMIKSSKKKS 70


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.340    0.154    0.489 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,426,040
Number of Sequences: 539616
Number of extensions: 935059
Number of successful extensions: 3397
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3389
Number of HSP's gapped (non-prelim): 14
length of query: 80
length of database: 191,569,459
effective HSP length: 51
effective length of query: 29
effective length of database: 164,049,043
effective search space: 4757422247
effective search space used: 4757422247
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 55 (25.8 bits)

Regulates the biosynthesis of dolichol phosphate-mannose. Essential for the ER localization and stable expression of dpm1.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	80
224138200	80	predicted protein [Populus trichocarpa]	1.0	1.0	0.85	6e-34
356537234	80	PREDICTED: dolichol phosphate-mannose bi	1.0	1.0	0.887	2e-33
357516973	80	Dolichol phosphate-mannose biosynthesis	1.0	1.0	0.875	4e-33
388512683	80	unknown [Lotus japonicus]	1.0	1.0	0.862	4e-32
357446705	79	Dolichol phosphate-mannose biosynthesis	0.975	0.987	0.871	6e-32
225427108	80	PREDICTED: dolichol phosphate-mannose bi	0.975	0.975	0.846	8e-32
449462047	80	PREDICTED: dolichol phosphate-mannose bi	1.0	1.0	0.837	1e-31
357156869	82	PREDICTED: dolichol phosphate-mannose bi	0.987	0.963	0.746	8e-28
242088799	82	hypothetical protein SORBIDRAFT_09g02816	0.912	0.890	0.780	3e-26
15221220	80	dolichyl-phosphate mannosyltransferase p	1.0	1.0	0.787	2e-25

>gi|224138200|ref|XP_002326543.1| predicted protein [Populus trichocarpa] gi|222833865|gb|EEE72342.1| predicted protein [Populus trichocarpa]

 Score =  147 bits (372), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 68/80 (85%), Positives = 77/80 (96%)

Query: 1  MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVL 60
          MELADR VGFLLS  S+SIFTYYTFWVIILPFVD+DHF+HQYFLPQEYAI++PVFAG+VL
Sbjct: 1  MELADRAVGFLLSLTSISIFTYYTFWVIILPFVDSDHFVHQYFLPQEYAILVPVFAGMVL 60

Query: 61 LCFLCIFIGFVILKSKKKKA 80
          LCFLC+F+GFV+LKSKKKKA
Sbjct: 61 LCFLCVFVGFVMLKSKKKKA 80

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537234|ref|XP_003537134.1| PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein [Glycine max] gi|255632149|gb|ACU16428.1| unknown [Glycine max]

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/80 (88%), Positives = 75/80 (93%)

Query: 1  MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVL 60
          MELADR VGFLLSFISLSIFTYYTFWVIILPFVD DHF+H+YFLPQEYAI+IPV AGV L
Sbjct: 1  MELADRAVGFLLSFISLSIFTYYTFWVIILPFVDDDHFVHKYFLPQEYAILIPVSAGVAL 60

Query: 61 LCFLCIFIGFVILKSKKKKA 80
          LC LCIFIGFV+LKSKKKKA
Sbjct: 61 LCLLCIFIGFVMLKSKKKKA 80

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357516973|ref|XP_003628775.1| Dolichol phosphate-mannose biosynthesis regulatory protein [Medicago truncatula] gi|355522797|gb|AET03251.1| Dolichol phosphate-mannose biosynthesis regulatory protein [Medicago truncatula] gi|388494526|gb|AFK35329.1| unknown [Medicago truncatula]

 Score =  145 bits (365), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 70/80 (87%), Positives = 75/80 (93%)

Query: 1  MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVL 60
          MELADR VGFLLSFISLSIFTYYTFWVIILPFVD DHF+H+YFLPQEYAI+IPV AGV L
Sbjct: 1  MELADRAVGFLLSFISLSIFTYYTFWVIILPFVDDDHFVHKYFLPQEYAILIPVSAGVAL 60

Query: 61 LCFLCIFIGFVILKSKKKKA 80
          +C LCIFIGFV+LKSKKKKA
Sbjct: 61 ICLLCIFIGFVMLKSKKKKA 80

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512683|gb|AFK44403.1| unknown [Lotus japonicus]

 Score =  141 bits (356), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 69/80 (86%), Positives = 74/80 (92%)

Query: 1  MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVL 60
          MELADR VGFLLS ISLSIFTYYTFWVIILPFVD DHF+H+YFLPQEYAI+IPV AGV +
Sbjct: 1  MELADRAVGFLLSVISLSIFTYYTFWVIILPFVDGDHFVHKYFLPQEYAILIPVCAGVAV 60

Query: 61 LCFLCIFIGFVILKSKKKKA 80
          LCFLCIFIGFV+LKSKKK A
Sbjct: 61 LCFLCIFIGFVMLKSKKKAA 80

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446705|ref|XP_003593628.1| Dolichol phosphate-mannose biosynthesis regulatory protein [Medicago truncatula] gi|355482676|gb|AES63879.1| Dolichol phosphate-mannose biosynthesis regulatory protein [Medicago truncatula]

 Score =  141 bits (355), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 68/78 (87%), Positives = 73/78 (93%)

Query: 1  MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVL 60
          MELADR VGFLLSFISLSIFTYYTFWVIILPFVD DHF+H+YFLPQEYAI+IPV AGV L
Sbjct: 1  MELADRAVGFLLSFISLSIFTYYTFWVIILPFVDDDHFVHKYFLPQEYAILIPVSAGVAL 60

Query: 61 LCFLCIFIGFVILKSKKK 78
          +C LCIFIGFV+LKSKKK
Sbjct: 61 ICLLCIFIGFVMLKSKKK 78

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427108|ref|XP_002277546.1| PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein [Vitis vinifera] gi|297742040|emb|CBI33827.3| unnamed protein product [Vitis vinifera]

 Score =  140 bits (354), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 66/78 (84%), Positives = 74/78 (94%)

Query: 1  MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVL 60
          MELADR VGFLLSFIS+SIF YYTFWVIILPFVD+DHFIH+YFLPQ+YAI+IPVFAGV L
Sbjct: 1  MELADRAVGFLLSFISISIFAYYTFWVIILPFVDSDHFIHKYFLPQDYAILIPVFAGVTL 60

Query: 61 LCFLCIFIGFVILKSKKK 78
          LCFLC F+GFV+LKSK+K
Sbjct: 61 LCFLCTFVGFVMLKSKQK 78

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462047|ref|XP_004148753.1| PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein-like [Cucumis sativus] gi|449517092|ref|XP_004165580.1| PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein-like [Cucumis sativus]

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/80 (83%), Positives = 73/80 (91%)

Query: 1  MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVL 60
          MELAD+ VGFLLS  SLSIFTYYTFWV+ILPFVD+DHFIH YFLPQEYAI+IPVFAGVVL
Sbjct: 1  MELADKTVGFLLSLTSLSIFTYYTFWVVILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 60

Query: 61 LCFLCIFIGFVILKSKKKKA 80
          LC L IF+G V+LKSKKKKA
Sbjct: 61 LCLLGIFVGTVMLKSKKKKA 80

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357156869|ref|XP_003577603.1| PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein-like [Brachypodium distachyon]

 Score =  127 bits (319), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 67/79 (84%)

Query: 1  MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVL 60
          MEL D+ +G +L+  SLSIFTYYTFWVIILPFVD DHF+H+YFLPQEYAI IPV AGVVL
Sbjct: 1  MELGDKAIGLVLTMTSLSIFTYYTFWVIILPFVDDDHFVHEYFLPQEYAIFIPVLAGVVL 60

Query: 61 LCFLCIFIGFVILKSKKKK 79
          L FL IF+G V+L SKKKK
Sbjct: 61 LSFLSIFVGLVMLNSKKKK 79

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242088799|ref|XP_002440232.1| hypothetical protein SORBIDRAFT_09g028160 [Sorghum bicolor] gi|241945517|gb|EES18662.1| hypothetical protein SORBIDRAFT_09g028160 [Sorghum bicolor]

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/73 (78%), Positives = 66/73 (90%)

Query: 1  MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVL 60
          MEL D+VVGFLL+  SLSIFTYYTFWVIILPFVD+DHF+H+YFLPQEYAI+IPV AGVVL
Sbjct: 1  MELGDKVVGFLLTLTSLSIFTYYTFWVIILPFVDSDHFVHKYFLPQEYAILIPVLAGVVL 60

Query: 61 LCFLCIFIGFVIL 73
          L FL +F+G V+L
Sbjct: 61 LSFLSVFVGLVML 73

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15221220|ref|NP_177574.1| dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory [Arabidopsis thaliana] gi|297842181|ref|XP_002888972.1| hypothetical protein ARALYDRAFT_316373 [Arabidopsis lyrata subsp. lyrata] gi|12324795|gb|AAG52357.1|AC011765_9 putative dolichyl-phosphate mannosyltransferase polypeptide 2; 4974-4608 [Arabidopsis thaliana] gi|28466791|gb|AAO44004.1| At1g74340 [Arabidopsis thaliana] gi|51968958|dbj|BAD43171.1| putative dolichyl-phosphate mannosyltransferase polypeptide 2 [Arabidopsis thaliana] gi|110735943|dbj|BAE99946.1| putative dolichyl-phosphate mannosyltransferase polypeptide 2 [Arabidopsis thaliana] gi|297334813|gb|EFH65231.1| hypothetical protein ARALYDRAFT_316373 [Arabidopsis lyrata subsp. lyrata] gi|332197459|gb|AEE35580.1| dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory [Arabidopsis thaliana]

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/80 (78%), Positives = 72/80 (90%)

Query: 1  MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVL 60
          MELADR VG LLS ISLSIFTYYTFWVIILPFVD+DHFIH+YFLPQ+YAI++PVFAG+ L
Sbjct: 1  MELADRAVGLLLSSISLSIFTYYTFWVIILPFVDSDHFIHKYFLPQDYAILVPVFAGIAL 60

Query: 61 LCFLCIFIGFVILKSKKKKA 80
          L  + +FIG V+LKSKKKKA
Sbjct: 61 LSLISVFIGMVMLKSKKKKA 80

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	80
TAIR|locus:2019220	80	DPMS2 "dolichol phosphate mann	1.0	1.0	0.787	8.8e-31
UNIPROTKB|Q5ZK98	84	DPM2 "Uncharacterized protein"	0.912	0.869	0.616	4.9e-21
RGD|2514	84	Dpm2 "dolichyl-phosphate manno	0.95	0.904	0.576	2.7e-20
MGI|MGI:1330238	84	Dpm2 "dolichol-phosphate (beta	0.95	0.904	0.576	3.5e-20
UNIPROTKB|O94777	84	DPM2 "Dolichol phosphate-manno	0.95	0.904	0.576	7.2e-20
ZFIN|ZDB-GENE-030131-9093	83	dpm2 "dolichol-phosphate (beta	0.95	0.915	0.552	1.5e-19
UNIPROTKB|F1RRY8	84	DPM2 "Uncharacterized protein"	0.95	0.904	0.589	1.9e-19
UNIPROTKB|F1MYZ5	84	DPM2 "Dolichol phosphate-manno	0.9	0.857	0.597	6.5e-19
UNIPROTKB|Q2KIN1	84	DPM2 "Dolichol phosphate-manno	0.9	0.857	0.597	1.7e-18
DICTYBASE|DDB_G0273981	79	dpm2-2 "dolichyl-phosphate man	0.987	1.0	0.481	1.1e-16

TAIR|locus:2019220 DPMS2 "dolichol phosphate mannose synthase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 63/80 (78%), Positives = 72/80 (90%)

Query:     1 MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVL 60
             MELADR VG LLS ISLSIFTYYTFWVIILPFVD+DHFIH+YFLPQ+YAI++PVFAG+ L
Sbjct:     1 MELADRAVGLLLSSISLSIFTYYTFWVIILPFVDSDHFIHKYFLPQDYAILVPVFAGIAL 60

Query:    61 LCFLCIFIGFVILKSKKKKA 80
             L  + +FIG V+LKSKKKKA
Sbjct:    61 LSLISVFIGMVMLKSKKKKA 80

GO:0009059 "macromolecule biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0033185 "dolichol-phosphate-mannose synthase complex" evidence=IPI

UNIPROTKB|Q5ZK98 DPM2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 45/73 (61%), Positives = 58/73 (79%)

Query:     5 DRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFL 64
             DR VGF L   SL +F YYT W+I+LPF+D+DH IHQYFLP+EYA+IIPV AG++LL F+
Sbjct:     6 DRAVGFGLVAFSLILFVYYTLWIIVLPFIDSDHSIHQYFLPREYAVIIPVVAGLLLLLFI 65

Query:    65 CIFIGFVILKSKK 77
              +FI  V+ KS+K
Sbjct:    66 GVFIMVVMWKSRK 78

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

GO:0000506 "glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex" evidence=IEA

GO:0004582 "dolichyl-phosphate beta-D-mannosyltransferase activity" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0031647 "regulation of protein stability" evidence=IEA

GO:0033185 "dolichol-phosphate-mannose synthase complex" evidence=IEA

RGD|2514 Dpm2 "dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit" [Rattus norvegicus (taxid:10116)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 45/78 (57%), Positives = 63/78 (80%)

Query:     5 DRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFL 64
             D+ VGF L  +SL IFTYYT WVI+LPF+D+ H IH+YFLP+ YA+++P+ AG++LL F+
Sbjct:     6 DQAVGFGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVLLPLAAGLLLLLFV 65

Query:    65 CIFIGFVILKSKK--KKA 80
              +FI +V+LKS+K  KKA
Sbjct:    66 GLFITYVLLKSQKVTKKA 83

GO:0000506 "glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex" evidence=IEA;ISO

GO:0004582 "dolichyl-phosphate beta-D-mannosyltransferase activity" evidence=ISO;IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006506 "GPI anchor biosynthetic process" evidence=ISO;IDA;TAS

GO:0019348 "dolichol metabolic process" evidence=IDA

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

GO:0030234 "enzyme regulator activity" evidence=IDA

GO:0031647 "regulation of protein stability" evidence=IEA;ISO

GO:0033185 "dolichol-phosphate-mannose synthase complex" evidence=ISO;IDA

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0050790 "regulation of catalytic activity" evidence=IDA

MGI|MGI:1330238 Dpm2 "dolichol-phosphate (beta-D) mannosyltransferase 2" [Mus musculus (taxid:10090)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 45/78 (57%), Positives = 63/78 (80%)

Query:     5 DRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFL 64
             D+ VGF L  +SL IFTYYT WVI+LPF+D+ H IH+YFLP+ YA+++P+ AG++LL F+
Sbjct:     6 DQAVGFGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVLLPLAAGLLLLLFV 65

Query:    65 CIFIGFVILKSKK--KKA 80
              +FI +V+LKS+K  KKA
Sbjct:    66 GLFITYVMLKSQKITKKA 83

GO:0000506 "glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex" evidence=ISO

GO:0004582 "dolichyl-phosphate beta-D-mannosyltransferase activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0006506 "GPI anchor biosynthetic process" evidence=ISO

GO:0009059 "macromolecule biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISM

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0019348 "dolichol metabolic process" evidence=ISO

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

GO:0030234 "enzyme regulator activity" evidence=ISO

GO:0031647 "regulation of protein stability" evidence=ISO

GO:0033185 "dolichol-phosphate-mannose synthase complex" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

GO:0050790 "regulation of catalytic activity" evidence=ISO

UNIPROTKB|O94777 DPM2 "Dolichol phosphate-mannose biosynthesis regulatory protein" [Homo sapiens (taxid:9606)]

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 45/78 (57%), Positives = 62/78 (79%)

Query:     5 DRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFL 64
             D+VVG  L  +SL IFTYYT WVI+LPF+D+ H IH+YFLP+ YA+ IP+ AG++LL F+
Sbjct:     6 DQVVGLGLVAVSLIIFTYYTAWVILLPFIDSQHVIHKYFLPRAYAVAIPLAAGLLLLLFV 65

Query:    65 CIFIGFVILKSKK--KKA 80
              +FI +V+LK+K+  KKA
Sbjct:    66 GLFISYVMLKTKRVTKKA 83

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

GO:0019348 "dolichol metabolic process" evidence=IEA

GO:0030234 "enzyme regulator activity" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0033185 "dolichol-phosphate-mannose synthase complex" evidence=IDA

GO:0006506 "GPI anchor biosynthetic process" evidence=IDA

GO:0031647 "regulation of protein stability" evidence=IPI

GO:0000506 "glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex" evidence=IDA;TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=TAS

GO:0006501 "C-terminal protein lipidation" evidence=TAS

GO:0016254 "preassembly of GPI anchor in ER membrane" evidence=TAS

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

GO:0004582 "dolichyl-phosphate beta-D-mannosyltransferase activity" evidence=IDA

GO:0035269 "protein O-linked mannosylation" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

ZFIN|ZDB-GENE-030131-9093 dpm2 "dolichol-phosphate (beta-D) mannosyltransferase 2" [Danio rerio (taxid:7955)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 42/76 (55%), Positives = 57/76 (75%)

Query:     4 ADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCF 63
             AD+ VGF L   SL +FTYY+ WV++LPFVD+DH IH YFLP+EY++I+P  A ++LL F
Sbjct:     5 ADQAVGFGLVGFSLLLFTYYSIWVVVLPFVDSDHVIHSYFLPREYSVILPGIAALILLLF 64

Query:    64 LCIFIGFVILKSKKKK 79
             +  FIG V  K++K K
Sbjct:    65 VGTFIGIVTWKNRKPK 80

GO:0009059 "macromolecule biosynthetic process" evidence=IEA

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|F1RRY8 DPM2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 46/78 (58%), Positives = 61/78 (78%)

Query:     5 DRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFL 64
             D+VVG  L  +SL IFTYYT WVI+LPF+D+ H IH+YFLP+ YA+ IP+ AG++LL F+
Sbjct:     6 DQVVGLGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVAIPLAAGLLLLLFV 65

Query:    65 CIFIGFVILKSKK--KKA 80
              +FI  V+LKS+K  KKA
Sbjct:    66 GVFITSVMLKSQKVTKKA 83

GO:0033185 "dolichol-phosphate-mannose synthase complex" evidence=IEA

GO:0031647 "regulation of protein stability" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0004582 "dolichyl-phosphate beta-D-mannosyltransferase activity" evidence=IEA

GO:0000506 "glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex" evidence=IEA

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|F1MYZ5 DPM2 "Dolichol phosphate-mannose biosynthesis regulatory protein" [Bos taurus (taxid:9913)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 43/72 (59%), Positives = 58/72 (80%)

Query:     5 DRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFL 64
             D+VVG  L  +SL IFTYYT WVI+LPF+D+ H IH+YFLP+ YAI IP+ AG++LL F+
Sbjct:     6 DQVVGLGLVALSLIIFTYYTAWVILLPFIDSQHVIHKYFLPRAYAIAIPLAAGLLLLLFV 65

Query:    65 CIFIGFVILKSK 76
              IFI +V+LK++
Sbjct:    66 GIFITYVMLKNQ 77

GO:0033185 "dolichol-phosphate-mannose synthase complex" evidence=IEA

GO:0031647 "regulation of protein stability" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0004582 "dolichyl-phosphate beta-D-mannosyltransferase activity" evidence=IEA

GO:0000506 "glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex" evidence=IEA

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|Q2KIN1 DPM2 "Dolichol phosphate-mannose biosynthesis regulatory protein" [Bos taurus (taxid:9913)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 43/72 (59%), Positives = 57/72 (79%)

Query:     5 DRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFL 64
             D+VVG  L  +SL IFTYYT WVI+LPF+D+ H IH+YFLP+ YAI IP+ AG +LL F+
Sbjct:     6 DQVVGLGLVALSLIIFTYYTAWVILLPFIDSQHVIHKYFLPRAYAIAIPLAAGHLLLLFV 65

Query:    65 CIFIGFVILKSK 76
              IFI +V+LK++
Sbjct:    66 GIFITYVMLKNQ 77

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

GO:0009059 "macromolecule biosynthetic process" evidence=IEA

DICTYBASE|DDB_G0273981 dpm2-2 "dolichyl-phosphate mannosyltransferase 2 regulatory subunit" [Dictyostelium discoideum (taxid:44689)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 38/79 (48%), Positives = 55/79 (69%)

Query:     1 MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVL 60
             M  +D+ +GF++    + +F YYT WVII PF+ +DH+I QYFLP+EY IIIP+   VV 
Sbjct:     1 MGASDKFIGFVMVLFRIFVFGYYTTWVIITPFIVSDHWIQQYFLPREYGIIIPLVLLVVG 60

Query:    61 LCFLCIFIGFVILKSKKKK 79
             +  +  F+G V++KSKK K
Sbjct:    61 ITAIGTFLGLVMIKSKKNK 79

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

GO:0009059 "macromolecule biosynthetic process" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2KIN1	DPM2_BOVIN	No assigned EC number	0.5890	0.9125	0.8690	yes	no
Q9Z1P1	DPM2_CRIGR	No assigned EC number	0.5696	0.9625	0.9166	yes	no
Q9USW6	DPM2_SCHPO	No assigned EC number	0.4	0.875	0.9722	yes	no
Q556K9	DPM2_DICDI	No assigned EC number	0.4810	0.9875	1.0	yes	no
O94777	DPM2_HUMAN	No assigned EC number	0.5769	0.95	0.9047	yes	no
Q9Z325	DPM2_RAT	No assigned EC number	0.5769	0.95	0.9047	yes	no
Q9Z324	DPM2_MOUSE	No assigned EC number	0.5769	0.95	0.9047	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_290241	hypothetical protein (80 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XII.204.1	hypothetical protein (249 aa)						•	•		0.964
	eugene3.01460030	transferase, transferring glycosyl groups (EC-2.4.1.142) (481 aa)						•	•		0.931
	estExt_Genewise1_v1.C_LG_XIV2606	SubName- Full=Putative uncharacterized protein; (424 aa)				•		•	•		0.923
	gw1.XVI.1421.1	hypothetical protein (391 aa)						•	•		0.915
	estExt_fgenesh4_pg.C_LG_X1846	hypothetical protein (335 aa)						•	•		0.902
	estExt_fgenesh4_pg.C_LG_VIII0457	hypothetical protein (335 aa)						•	•		0.902
	estExt_fgenesh4_pm.C_280064	hypothetical protein (223 aa)						•	•		0.901
	grail3.0004040902	hypothetical protein (222 aa)						•	•		0.901
	gw1.IX.4952.1	hypothetical protein (586 aa)						•			0.899
	grail3.0100006001	hypothetical protein (342 aa)						•	•		0.827

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	80
pfam07297	80	pfam07297, DPM2, Dolichol phosphate-mannose biosyn	3e-32

>gnl|CDD|148734 pfam07297, DPM2, Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2)

 Score =  106 bits (266), Expect = 3e-32
 Identities = 49/80 (61%), Positives = 62/80 (77%)

Query: 1  MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVL 60
              DR+VG  L  +SL IFTYYT WVI+LPFVD+DH IH +FLP+EYAI IPV AG++L
Sbjct: 1  ATGTDRLVGLGLLAVSLIIFTYYTIWVILLPFVDSDHVIHSFFLPREYAIRIPVIAGLLL 60

Query: 61 LCFLCIFIGFVILKSKKKKA 80
          L F+  FIG V++KS++KKA
Sbjct: 61 LLFVGSFIGVVMIKSRRKKA 80

This family consists of several eukaryotic dolichol phosphate-mannose biosynthesis regulatory (DPM2) proteins. Biosynthesis of glycosylphosphatidylinositol and N-glycan precursor is dependent upon a mannosyl donor, dolichol phosphate-mannose (DPM). DPM2, an 84 amino acid membrane protein expressed in the endoplasmic reticulum (ER), makes a complex with DPM1 that is essential for the ER localisation and stable expression of DPM1. Moreover, DPM2 enhances binding of dolichol phosphate, a substrate of DPM synthase. Biosynthesis of DPM in mammalian cells is regulated by DPM2. Length = 80

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	80
PF07297	78	DPM2: Dolichol phosphate-mannose biosynthesis regu	100.0
KOG3488	81	consensus Dolichol phosphate-mannose regulatory pr	100.0
PF08510	126	PIG-P: PIG-P; InterPro: IPR013717 PIG-P (phosphati	97.66
KOG2257	135	consensus N-acetylglucosaminyltransferase complex,	97.21
PF10510	517	PIG-S: Phosphatidylinositol-glycan biosynthesis cl	92.44
PF15102	146	TMEM154: TMEM154 protein family	81.26

>PF07297 DPM2: Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2); InterPro: IPR009914 This family consists of several eukaryotic dolichol phosphate-mannose biosynthesis regulatory (DPM2) proteins

Probab=100.00  E-value=8.5e-43  Score=224.56  Aligned_cols=78  Identities=55%  Similarity=1.034  Sum_probs=76.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCceeeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
Q 034893            3 LADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFLCIFIGFVILKSKKKKA   80 (80)
Q Consensus         3 ~~D~~vG~~~L~~~~~~F~YYt~Wv~vlPFvd~d~~i~~~F~pr~yAi~lP~~lll~~~~~vg~Fig~vlik~~~k~~   80 (80)
                      |+||++|.+|+++++++|+|||+|++++||+|+||++|+|||||||||++|+++++++++++|+|+|++|+||+||||
T Consensus         1 ~~Dr~vG~~~l~~a~~vF~YYt~WvlllPFvd~d~~i~~~F~Pr~yAi~lP~~lll~~~~~vg~f~g~vmik~~~kk~   78 (78)
T PF07297_consen    1 MSDRLVGLLMLAVALSVFTYYTIWVLLLPFVDEDHPIHSFFPPREYAIILPIFLLLLGLSGVGTFLGYVMIKSKKKKA   78 (78)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCchHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC
Confidence            689999999999999999999999999999999999999999999999999999999999999999999999999986

Biosynthesis of glycosylphosphatidylinositol and N-glycan precursor is dependent upon a mannosyl donor, dolichol phosphate-mannose (DPM). DPM2, an 84 amino acid membrane protein expressed in the endoplasmic reticulum (ER), makes a complex with DPM1 that is essential for the ER localisation and stable expression of DPM1. Moreover, DPM2 enhances binding of dolichol phosphate, a substrate of DPM synthase. Biosynthesis of DPM in mammalian cells is regulated by DPM2 [].; GO: 0009059 macromolecule biosynthetic process, 0030176 integral to endoplasmic reticulum membrane

>KOG3488 consensus Dolichol phosphate-mannose regulatory protein (DPM2) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.1e-36  Score=195.95  Aligned_cols=80  Identities=66%  Similarity=1.146  Sum_probs=78.1

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCceeeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
Q 034893            1 MELADRVVGFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFLCIFIGFVILKSKKKKA   80 (80)
Q Consensus         1 m~~~D~~vG~~~L~~~~~~F~YYt~Wv~vlPFvd~d~~i~~~F~pr~yAi~lP~~lll~~~~~vg~Fig~vlik~~~k~~   80 (80)
                      |+..||.+|+.+..+|+++|+|||+|++++||+|++|.+|+||+||||||.+|+.+++.+++++|+|+|++|+|++|||+
T Consensus         1 ~~~~d~~vgl~lv~iSl~iFtYYT~WViilPFvDs~hiihKyFLpr~yAi~iPvaagl~ll~lig~Fis~vMlKskkKKa   80 (81)
T KOG3488|consen    1 ATGTDQVVGLMLVYISLAIFTYYTIWVIILPFVDSMHIIHKYFLPREYAITIPVAAGLFLLCLIGTFISLVMLKSKKKKA   80 (81)
T ss_pred             CCchhhhhhHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHhcChhHHhhhHHHHHHHHHHHHHHHHHHHhhhcccccC
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999885

>PF08510 PIG-P: PIG-P; InterPro: IPR013717 PIG-P (phosphatidylinositol N-acetylglucosaminyltransferase subunit P) is an enzyme involved in GPI anchor biosynthesis []

Probab=97.66  E-value=0.00019  Score=48.66  Aligned_cols=63  Identities=22%  Similarity=0.429  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccCCCceeeccCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034893            9 GFLLSFISLSIFTYYTFWVIILPFVDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFLCIFIGFVI   72 (80)
Q Consensus         9 G~~~L~~~~~~F~YYt~Wv~vlPFvd~d~~i~~~F~pr~yAi~lP~~lll~~~~~vg~Fig~vl   72 (80)
                      |+..-..+.++|+=|.+|. .+|===.++--..|+|.|.||+.+|..+++..+...-+..++-+
T Consensus         7 GFv~~i~s~~~~~lyl~Wa-~lP~~~L~~lgity~P~kyWAlaiP~~~l~~~l~~~~~y~~~N~   69 (126)
T PF08510_consen    7 GFVLYILSTVAFVLYLLWA-FLPDEWLHSLGITYYPDKYWALAIPSWLLMAMLFTYVGYPAYNL   69 (126)
T ss_pred             ehHHHHHHHHHHHHHHHHH-hcCHHHHHhcCccccCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7888889999999999999 44421111223479999999999999988865555555555444

>KOG2257 consensus N-acetylglucosaminyltransferase complex, subunit PIG-P, required for phosphatidylinositol biosynthesis [Function unknown]

Probab=97.21  E-value=0.0011  Score=46.84  Aligned_cols=68  Identities=26%  Similarity=0.562  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccc-ccCCCceeeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 034893            8 VGFLLSFISLSIFTYYTFWVIILPF-VDTDHFIHQYFLPQEYAIIIPVFAGVVLLCFLCIFIGFVILKSKK   77 (80)
Q Consensus         8 vG~~~L~~~~~~F~YYt~Wv~vlPF-vd~d~~i~~~F~pr~yAi~lP~~lll~~~~~vg~Fig~vlik~~~   77 (80)
                      =|+.+-.++.+.|+=|.+|. ++|- +-+.-.+ .|+|.|-||+.+|..+++..++..-..+|+=..+..|
T Consensus        10 YgF~~yiv~~~~~ViylIWa-i~P~~~l~~~gi-~y~Psk~WalAip~~l~v~~l~~~v~ll~~N~e~tt~   78 (135)
T KOG2257|consen   10 YGFVLYIVSWTLFVIYLIWA-ITPVPILESLGI-TYYPSKYWALAIPTYLLVAVLLAYVFLLGYNFESTTK   78 (135)
T ss_pred             hhhHHHHHHHHHHHHHHHhh-cccHHHHhhcCc-eeehHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC
Confidence            48888899999999999999 5553 2222224 5999999999999999988888777777665555544

>PF10510 PIG-S: Phosphatidylinositol-glycan biosynthesis class S protein; InterPro: IPR019540 Phosphatidylinositol-glycan biosynthesis class S protein (PIG-S) is one of several key, core components of the glycosylphosphatidylinositol (GPI) trans-amidase complex that mediates GPI anchoring in the endoplasmic reticulum

Probab=92.44  E-value=0.063  Score=43.53  Aligned_cols=48  Identities=21%  Similarity=0.495  Sum_probs=33.8

Q ss_pred             cccCCCceeeccCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 034893           32 FVDTDHFIHQYFLP-QEYAIIIPVFAGVVLLCFLCIFIGFVILKSKKKK   79 (80)
Q Consensus        32 Fvd~d~~i~~~F~p-r~yAi~lP~~lll~~~~~vg~Fig~vlik~~~k~   79 (80)
                      |+|.+=--+.|||+ .+|||++|.++=+..-.++|.+=-.--+|++|||
T Consensus       469 Ffd~sml~~lyFP~EhK~AVY~PLf~Pi~~pl~~~~~~~~k~~~~~rk~  517 (517)
T PF10510_consen  469 FFDPSMLQQLYFPDEHKYAVYLPLFGPISVPLLLGLLKELKEWRKRRKE  517 (517)
T ss_pred             hCCHhhhhhccCChhheeEeeehhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence            67777667788886 6899999999777666666655555455555554

Anchoring occurs when a protein's C-terminal GPI attachment signal peptide is replaced with a pre-assembled GPI []. Mammalian GPI transamidase consists of at least five components: Gaa1, Gpi8, PIG-S, PIG-T, and PIG-U, all five of which are required for its function. It is possible that Gaa1, Gpi8, PIG-S, and PIG-T form a tightly associated core that is only weakly associated with PIG-U. The exact function of PIG-S is unclear [].

>PF15102 TMEM154: TMEM154 protein family

Probab=81.26  E-value=0.79  Score=32.77  Aligned_cols=17  Identities=35%  Similarity=0.485  Sum_probs=11.9

Q ss_pred             HHHHHHHHHHHHHHHHH
Q 034893           48 YAIIIPVFAGVVLLCFL   64 (80)
Q Consensus        48 yAi~lP~~lll~~~~~v   64 (80)
                      .=|.||.+++++++..+
T Consensus        59 LmIlIP~VLLvlLLl~v   75 (146)
T PF15102_consen   59 LMILIPLVLLVLLLLSV   75 (146)
T ss_pred             EEEeHHHHHHHHHHHHH
Confidence            45789987776666655

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00