Citrus Sinensis ID: 035162

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70-
Protein Sequence
MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRARIRGNKGY
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHccccccccccHHHHHcccccccHHHHHHHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHccccEEEccccHHHHHccccccccHHHHHHHHHHHHHHccHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MSKSCKGLAMELVKClsesdcvkvekrsfrecagekspcipsecvglretyfnckrgqvdmrarirgnkgy
Flexible Loop (DISEMBL)
MSKSCKGLAMELVkclsesdcvKVEKRsfrecagekspcipsecvglretyfnckrgqvdmrarirgnkgy
Low Complexity Region (SEG)
MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRARIRGNKGY
Disordered region (IsUnstruct)
*******LAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQV************
Disordered Region (DISOPRED)
***SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRARIRGN***
Disordered Region (DISEMBL)
MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRARIRGNKGY
Disordered Region (DISPRO)
***SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRARIR*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRARIRGNKGY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	71	2.2.26 [Sep-21-2011]
O42921	85	Mitochondrial protein pet	yes	no	0.915	0.764	0.454	3e-07
Q5RFJ0	74	Cytochrome c oxidase asse	yes	no	0.873	0.837	0.455	6e-07
Q86WW8	74	Cytochrome c oxidase asse	yes	no	0.873	0.837	0.441	8e-07
Q28CA1	75	Cytochrome c oxidase asse	yes	no	0.859	0.813	0.432	9e-07
A1L3N6	75	Cytochrome c oxidase asse	N/A	no	0.859	0.813	0.447	1e-06
Q3ZCK8	74	Cytochrome c oxidase asse	yes	no	0.873	0.837	0.411	2e-06
Q99M07	74	Cytochrome c oxidase asse	yes	no	0.873	0.837	0.397	1e-05
Q02772	108	Mitochondrial protein PET	yes	no	0.957	0.629	0.357	5e-05
Q0P451	75	Cytochrome c oxidase asse	yes	no	0.873	0.826	0.352	0.0004

>sp|O42921|PT191_SCHPO Mitochondrial protein pet191 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16A3.16 PE=3 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          M +SCK +  +L  CL  SDC+ V+K+S REC   K   +P EC  L E Y  CKR  +D
Sbjct: 1  MGRSCKVIREDLANCLLHSDCMFVKKKSARECLKNKDE-LPEECKNLIEAYGECKRQMLD 59

Query: 61 MRARIR 66
          M  R R
Sbjct: 60 MTKRYR 65

Involved in the assembly of cytochrome c oxidase.
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q5RFJ0|COA5_PONAB Cytochrome c oxidase assembly factor 5 OS=Pongo abelii GN=Coa5 PE=3 SV=1

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 4  SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
          +C GL  +L  CL ESDCV  E +S R+C  E        C  L+  +F CKR  +D RA
Sbjct: 13 ACGGLKEDLGACLLESDCVVQEGKSPRQCLKE------GYCNSLKYAFFECKRSVLDNRA 66

Query: 64 RIRGNKGY 71
          R RG KGY
Sbjct: 67 RFRGRKGY 74

Involved in an early step of the mitochondrial complex IV assembly process.

Pongo abelii (taxid: 9601)

>sp|Q86WW8|COA5_HUMAN Cytochrome c oxidase assembly factor 5 OS=Homo sapiens GN=COA5 PE=1 SV=1

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 4  SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
          +C GL  +L  CL +SDCV  E +S R+C  E        C  L+  +F CKR  +D RA
Sbjct: 13 ACAGLKEDLGACLLQSDCVVQEGKSPRQCLKE------GYCNSLKYAFFECKRSVLDNRA 66

Query: 64 RIRGNKGY 71
          R RG KGY
Sbjct: 67 RFRGRKGY 74

Involved in an early step of the mitochondrial complex IV assembly process.

Homo sapiens (taxid: 9606)

>sp|Q28CA1|COA5_XENTR Cytochrome c oxidase assembly factor 5 OS=Xenopus tropicalis GN=coa5 PE=3 SV=1

 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 5  CKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRAR 64
          C G+  +L  CL ++DCV  E +S +EC  E        C  L+ T+F CKR  +D RAR
Sbjct: 15 CAGVKEDLKSCLLQTDCVLQEGKSPKECLKE------GYCKALQVTFFECKRSILDTRAR 68

Query: 65 IRGNKGY 71
           RG KGY
Sbjct: 69 FRGRKGY 75

Involved in an early step of the mitochondrial complex IV assembly process.

Xenopus tropicalis (taxid: 8364)

>sp|A1L3N6|COA5_XENLA Cytochrome c oxidase assembly factor 5 OS=Xenopus laevis GN=coa5 PE=3 SV=1

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 5  CKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRAR 64
          C G+  +L  CL +SDCV  E +S +EC  E        C  L+ T+F CKR  +D RAR
Sbjct: 15 CGGVKEDLKNCLLQSDCVLQEGKSPKECLKE------GYCKALQVTFFECKRSILDNRAR 68

Query: 65 IRGNKGY 71
           RG KGY
Sbjct: 69 FRGRKGY 75

Involved in an early step of the mitochondrial complex IV assembly process.

Xenopus laevis (taxid: 8355)

>sp|Q3ZCK8|COA5_BOVIN Cytochrome c oxidase assembly factor 5 OS=Bos taurus GN=COA5 PE=3 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 6/68 (8%)

Query: 4  SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
          +C G+  +L  CL +SDCV  E +S R+C  E        C  L+ ++F CKR  +D R+
Sbjct: 13 ACAGVKEDLGLCLLQSDCVLKEGKSPRQCLKE------GNCKALKYSFFECKRSMLDARS 66

Query: 64 RIRGNKGY 71
          R RG KGY
Sbjct: 67 RFRGRKGY 74

Involved in an early step of the mitochondrial complex IV assembly process.

Bos taurus (taxid: 9913)

>sp|Q99M07|COA5_MOUSE Cytochrome c oxidase assembly factor 5 OS=Mus musculus GN=Coa5 PE=2 SV=1

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 4  SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
          +C G+  +L  CL +S CV  E +S R+C  E        C  L+ ++F CKR  +D R+
Sbjct: 13 ACAGVKEDLGACLLQSACVLQEGKSPRQCLKE------GNCRALQYSFFECKRSMLDARS 66

Query: 64 RIRGNKGY 71
          R RG KGY
Sbjct: 67 RFRGRKGY 74

Involved in an early step of the mitochondrial complex IV assembly process.

Mus musculus (taxid: 10090)

>sp|Q02772|PT191_YEAST Mitochondrial protein PET191 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PET191 PE=1 SV=1

 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAG--EKSPCIPSECVGLRETYFNCKRGQ 58
          M  SCK     +  CL  S CV +E+ + +EC    E +  +P  C+   + + +CKRG 
Sbjct: 1  MVASCKDQKKAVAICLQRSPCVMIERHNPQECLDNPELNKDLPELCIAQMKAFLDCKRGI 60

Query: 59 VDMRARIRGN 68
          VDM  R  GN
Sbjct: 61 VDMTKRFTGN 70

Involved in the assembly of cytochrome c oxidase.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q0P451|COA5_DANRE Cytochrome c oxidase assembly factor 5 OS=Danio rerio GN=coa5 PE=3 SV=1

 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%)

Query: 3  KSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMR 62
          ++C GL  +   CL + DCV  E +   EC  E        C  ++  +F CKR  +D R
Sbjct: 13 RACSGLREDFKACLLQHDCVVKEGKKPSECLKE------GHCRSMQVAFFECKRSMLDTR 66

Query: 63 ARIRGNKG 70
          +R RG KG
Sbjct: 67 SRFRGRKG 74


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.135    0.420 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,280,788
Number of Sequences: 539616
Number of extensions: 762742
Number of successful extensions: 1205
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1186
Number of HSP's gapped (non-prelim): 10
length of query: 71
length of database: 191,569,459
effective HSP length: 43
effective length of query: 28
effective length of database: 168,365,971
effective search space: 4714247188
effective search space used: 4714247188
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)

Involved in an early step of the mitochondrial complex IV assembly process.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	71
356544094	71	PREDICTED: cytochrome c oxidase assembly	1.0	1.0	0.957	1e-31
449449374	71	PREDICTED: cytochrome c oxidase assembly	1.0	1.0	0.943	2e-31
255545096	71	conserved hypothetical protein [Ricinus	1.0	1.0	0.943	3e-31
356549657	71	PREDICTED: cytochrome c oxidase assembly	1.0	1.0	0.943	3e-31
225443144	71	PREDICTED: cytochrome c oxidase assembly	1.0	1.0	0.929	9e-30
225443162	71	PREDICTED: cytochrome c oxidase assembly	1.0	1.0	0.929	9e-30
224110032	71	predicted protein [Populus trichocarpa]	1.0	1.0	0.887	2e-29
357159461	71	PREDICTED: cytochrome c oxidase assembly	1.0	1.0	0.887	6e-29
297849448	71	hypothetical protein ARALYDRAFT_471225 [	1.0	1.0	0.901	7e-29
242045330	71	hypothetical protein SORBIDRAFT_02g03010	1.0	1.0	0.873	2e-28

>gi|356544094|ref|XP_003540490.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Glycine max]

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/71 (95%), Positives = 70/71 (98%)

Query: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLAMELVKCLSESDCVKVEKRS++EC GEKSPCIPSECVGLRETYFNCKRGQVD
Sbjct: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSYKECVGEKSPCIPSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 71
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449374|ref|XP_004142440.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Cucumis sativus] gi|449487146|ref|XP_004157510.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Cucumis sativus]

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/71 (94%), Positives = 70/71 (98%)

Query: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLAMELVKCLSESDCVKV+ R++RECAGEKSPCIPSECVGLRETYFNCKRGQVD
Sbjct: 1  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 71
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545096|ref|XP_002513609.1| conserved hypothetical protein [Ricinus communis] gi|223547517|gb|EEF49012.1| conserved hypothetical protein [Ricinus communis]

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/71 (94%), Positives = 70/71 (98%)

Query: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          M+KSCKGLAMELVKCLSESDCVKVEKR +RECAGEKSPCIPSECVGLRETYFNCKRGQ+D
Sbjct: 1  MAKSCKGLAMELVKCLSESDCVKVEKRPYRECAGEKSPCIPSECVGLRETYFNCKRGQLD 60

Query: 61 MRARIRGNKGY 71
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549657|ref|XP_003543208.1| PREDICTED: cytochrome c oxidase assembly factor 5 [Glycine max] gi|255630764|gb|ACU15743.1| unknown [Glycine max]

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/71 (94%), Positives = 69/71 (97%)

Query: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLAMELVKCLSESDCVKVEKRS++EC GEKSPCIPSEC GLRETYFNCKRGQVD
Sbjct: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSYKECVGEKSPCIPSECAGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 71
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443144|ref|XP_002263356.1| PREDICTED: cytochrome c oxidase assembly factor 5 [Vitis vinifera] gi|298204693|emb|CBI25191.3| unnamed protein product [Vitis vinifera]

 Score =  134 bits (336), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 66/71 (92%), Positives = 68/71 (95%)

Query: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLAMELVKCLSE+DCVKVEKRSF+EC GEKSP I SECVGLRETYFNCKRGQVD
Sbjct: 1  MSKSCKGLAMELVKCLSETDCVKVEKRSFKECCGEKSPSISSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 71
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443162|ref|XP_002264124.1| PREDICTED: cytochrome c oxidase assembly factor 5 [Vitis vinifera] gi|298204681|emb|CBI25179.3| unnamed protein product [Vitis vinifera]

 Score =  134 bits (336), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 66/71 (92%), Positives = 68/71 (95%)

Query: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLAMELVKCLSE+DCVKVEKRSF+EC GEKSP I SECVGLRETYFNCKRGQVD
Sbjct: 1  MSKSCKGLAMELVKCLSETDCVKVEKRSFKECCGEKSPLISSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 71
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110032|ref|XP_002315392.1| predicted protein [Populus trichocarpa] gi|222864432|gb|EEF01563.1| predicted protein [Populus trichocarpa]

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/71 (88%), Positives = 68/71 (95%)

Query: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLA+ELVKCLSESDC+K+E R ++ECAGEKSP IPSECVGLRETYFNCKRGQVD
Sbjct: 1  MSKSCKGLALELVKCLSESDCIKMEDRPYKECAGEKSPSIPSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 71
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357159461|ref|XP_003578454.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Brachypodium distachyon] gi|326497105|dbj|BAK02137.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  131 bits (329), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 63/71 (88%), Positives = 68/71 (95%)

Query: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLAMELVKCLSE+DCVKV+KR ++ECAGEK+P I SECVGLRETYFNCKRGQVD
Sbjct: 1  MSKSCKGLAMELVKCLSETDCVKVQKRPYKECAGEKAPNITSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 71
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297849448|ref|XP_002892605.1| hypothetical protein ARALYDRAFT_471225 [Arabidopsis lyrata subsp. lyrata] gi|297338447|gb|EFH68864.1| hypothetical protein ARALYDRAFT_471225 [Arabidopsis lyrata subsp. lyrata]

 Score =  130 bits (328), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 67/71 (94%)

Query: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          M+KSCKGLA ELVKCLSES CVK EKRS R+CAGEKSPCIPSEC+GLRETYFNCKRGQVD
Sbjct: 1  MAKSCKGLAEELVKCLSESTCVKGEKRSIRDCAGEKSPCIPSECIGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 71
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242045330|ref|XP_002460536.1| hypothetical protein SORBIDRAFT_02g030100 [Sorghum bicolor] gi|241923913|gb|EER97057.1| hypothetical protein SORBIDRAFT_02g030100 [Sorghum bicolor] gi|414589991|tpg|DAA40562.1| TPA: hypothetical protein ZEAMMB73_292465 [Zea mays]

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/71 (87%), Positives = 67/71 (94%)

Query: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          M+KSCKGLAMELVKCLSE+DCVKV+KR ++ECAGEK P I SECVGLRETYFNCKRGQVD
Sbjct: 1  MAKSCKGLAMELVKCLSETDCVKVQKRPYKECAGEKVPNITSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 71
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	71
TAIR|locus:4010713430	71	AT1G10865 "AT1G10865" [Arabido	1.0	1.0	0.901	3.3e-31
WB|WBGene00012483	96	Y18D10A.16 [Caenorhabditis ele	0.943	0.697	0.411	9.4e-11
UNIPROTKB|E1C792	75	COA5 "Uncharacterized protein"	0.887	0.84	0.449	1.5e-10
POMBASE|SPBC16A3.16	85	SPBC16A3.16 "mitochondrial inn	0.915	0.764	0.454	2e-10
UNIPROTKB|F1STD9	74	COA5 "Uncharacterized protein"	0.873	0.837	0.426	1.8e-09
UNIPROTKB|Q3ZCK8	74	COA5 "Cytochrome c oxidase ass	0.873	0.837	0.411	2.9e-09
UNIPROTKB|Q86WW8	74	COA5 "Cytochrome c oxidase ass	0.873	0.837	0.441	2.9e-09
MGI|MGI:1923428	74	Coa5 "cytochrome C oxidase ass	0.873	0.837	0.397	2.6e-08
RGD|1565095	74	Coa5 "cytochrome C oxidase ass	0.873	0.837	0.397	2.6e-08
SGD|S000003795	108	PET191 "Protein required for a	0.957	0.629	0.357	1.4e-07

TAIR|locus:4010713430 AT1G10865 "AT1G10865" [Arabidopsis thaliana (taxid:3702)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 64/71 (90%), Positives = 66/71 (92%)

Query:     1 MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
             M+KSCKGLA ELVKCLSES CVK EKRS R+C GEKSPCIPSECVGLRETYFNCKRGQVD
Sbjct:     1 MAKSCKGLAEELVKCLSESICVKGEKRSIRDCTGEKSPCIPSECVGLRETYFNCKRGQVD 60

Query:    61 MRARIRGNKGY 71
             MRARIRGNKGY
Sbjct:    61 MRARIRGNKGY 71

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

WB|WBGene00012483 Y18D10A.16 [Caenorhabditis elegans (taxid:6239)]

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 28/68 (41%), Positives = 40/68 (58%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSP-CIPSECVGLRETYFNCKRGQVDMR 62
             SC  L   L KC+  S CV+V+ RS +EC   +    +P +C  + + + +CKR  VDMR
Sbjct:    27 SCDRLRQALKKCIKNSHCVQVQARSAKECIDARGDGSVPDKCFAVLQNFTDCKRSLVDMR 86

Query:    63 ARIRGNKG 70
             +R RG KG
Sbjct:    87 SRFRGRKG 94

GO:0040010 "positive regulation of growth rate" evidence=IMP

UNIPROTKB|E1C792 COA5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 31/69 (44%), Positives = 41/69 (59%)

Query:     3 KSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMR 62
             ++C G+  +L +CL ES CV  E +S R+C  E        C GL+ T+F CKR  +D R
Sbjct:    13 QACSGVREDLRQCLLESPCVLQENKSPRQCLRE------GHCKGLQLTFFACKRSMLDTR 66

Query:    63 ARIRGNKGY 71
             AR RG KGY
Sbjct:    67 ARFRGRKGY 75

GO:0005739 "mitochondrion" evidence=IEA

POMBASE|SPBC16A3.16 SPBC16A3.16 "mitochondrial inner membrane protein involved in cytochrome c oxidase assembly Pet191 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 30/66 (45%), Positives = 38/66 (57%)

Query:     1 MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
             M +SCK +  +L  CL  SDC+ V+K+S REC   K   +P EC  L E Y  CKR  +D
Sbjct:     1 MGRSCKVIREDLANCLLHSDCMFVKKKSARECLKNKDE-LPEECKNLIEAYGECKRQMLD 59

Query:    61 MRARIR 66
             M  R R
Sbjct:    60 MTKRYR 65

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0007005 "mitochondrion organization" evidence=IC

GO:0008535 "respiratory chain complex IV assembly" evidence=ISO

UNIPROTKB|F1STD9 COA5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/68 (42%), Positives = 40/68 (58%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
             +C G+  +L  CL +SDCV  E +S R+C  E S      C  L+ ++F CKR  +D R+
Sbjct:    13 ACAGVKEDLGACLLQSDCVLQEGKSPRQCLKEGS------CKALQYSFFECKRSMLDARS 66

Query:    64 RIRGNKGY 71
             R RG KGY
Sbjct:    67 RFRGRKGY 74

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q3ZCK8 COA5 "Cytochrome c oxidase assembly factor 5" [Bos taurus (taxid:9913)]

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 28/68 (41%), Positives = 39/68 (57%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
             +C G+  +L  CL +SDCV  E +S R+C  E        C  L+ ++F CKR  +D R+
Sbjct:    13 ACAGVKEDLGLCLLQSDCVLKEGKSPRQCLKE------GNCKALKYSFFECKRSMLDARS 66

Query:    64 RIRGNKGY 71
             R RG KGY
Sbjct:    67 RFRGRKGY 74

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q86WW8 COA5 "Cytochrome c oxidase assembly factor 5" [Homo sapiens (taxid:9606)]

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 30/68 (44%), Positives = 38/68 (55%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
             +C GL  +L  CL +SDCV  E +S R+C  E        C  L+  +F CKR  +D RA
Sbjct:    13 ACAGLKEDLGACLLQSDCVVQEGKSPRQCLKE------GYCNSLKYAFFECKRSVLDNRA 66

Query:    64 RIRGNKGY 71
             R RG KGY
Sbjct:    67 RFRGRKGY 74

GO:0005739 "mitochondrion" evidence=IEA

MGI|MGI:1923428 Coa5 "cytochrome C oxidase assembly factor 5" [Mus musculus (taxid:10090)]

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 27/68 (39%), Positives = 38/68 (55%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
             +C G+  +L  CL +S CV  E +S R+C  E        C  L+ ++F CKR  +D R+
Sbjct:    13 ACAGVKEDLGACLLQSACVLQEGKSPRQCLKE------GNCRALQYSFFECKRSMLDARS 66

Query:    64 RIRGNKGY 71
             R RG KGY
Sbjct:    67 RFRGRKGY 74

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0008150 "biological_process" evidence=ND

RGD|1565095 Coa5 "cytochrome C oxidase assembly factor 5" [Rattus norvegicus (taxid:10116)]

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 27/68 (39%), Positives = 38/68 (55%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
             +C G+  +L  CL +S CV  E +S R+C  E        C  L+ ++F CKR  +D R+
Sbjct:    13 ACAGVKEDLGACLLQSACVLQEGKSPRQCLKE------GNCRALQYSFFECKRSMLDARS 66

Query:    64 RIRGNKGY 71
             R RG KGY
Sbjct:    67 RFRGRKGY 74

GO:0005739 "mitochondrion" evidence=IEA;ISO

SGD|S000003795 PET191 "Protein required for assembly of cytochrome c oxidase" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 25/70 (35%), Positives = 36/70 (51%)

Query:     1 MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAG--EKSPCIPSECVGLRETYFNCKRGQ 58
             M  SCK     +  CL  S CV +E+ + +EC    E +  +P  C+   + + +CKRG 
Sbjct:     1 MVASCKDQKKAVAICLQRSPCVMIERHNPQECLDNPELNKDLPELCIAQMKAFLDCKRGI 60

Query:    59 VDMRARIRGN 68
             VDM  R  GN
Sbjct:    61 VDMTKRFTGN 70

GO:0003674 "molecular_function" evidence=ND

GO:0033617 "mitochondrial respiratory chain complex IV assembly" evidence=IMP

GO:0005758 "mitochondrial intermembrane space" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0031305 "integral to mitochondrial inner membrane" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0P451	COA5_DANRE	No assigned EC number	0.3529	0.8732	0.8266	yes	no
Q28CA1	COA5_XENTR	No assigned EC number	0.4328	0.8591	0.8133	yes	no
Q99M07	COA5_MOUSE	No assigned EC number	0.3970	0.8732	0.8378	yes	no
Q3ZCK8	COA5_BOVIN	No assigned EC number	0.4117	0.8732	0.8378	yes	no
Q86WW8	COA5_HUMAN	No assigned EC number	0.4411	0.8732	0.8378	yes	no
Q5RFJ0	COA5_PONAB	No assigned EC number	0.4558	0.8732	0.8378	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0106006401 hypothetical protein (72 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	71
pfam10203	68	pfam10203, Pet191_N, Cytochrome c oxidase assembly	2e-28

>gnl|CDD|192483 pfam10203, Pet191_N, Cytochrome c oxidase assembly protein PET191

 Score = 96.2 bits (240), Expect = 2e-28
 Identities = 39/68 (57%), Positives = 47/68 (69%)

Query: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          M  SCKGL  +L +CL ESDCVK EKR+ REC  E    +P EC+ LR+ +F CKRG +D
Sbjct: 1  MGSSCKGLREDLAECLLESDCVKKEKRTPRECLKEPLKELPEECIALRKAFFECKRGMLD 60

Query: 61 MRARIRGN 68
          MR R RGN
Sbjct: 61 MRKRFRGN 68

Pet191_N is the conserved N-terminal of a family of conserved proteins found from nematodes to humans. It carries six highly conserved cysteine residues. Pet191 is required for the assembly of active cytochrome c oxidase but does not form part of the final assembled complex. Length = 68

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	71
PF10203	68	Pet191_N: Cytochrome c oxidase assembly protein PE	100.0
KOG4114	73	consensus Cytochrome c oxidase assembly protein PE	100.0
PF06747	35	CHCH: CHCH domain; InterPro: IPR010625 A conserved	85.65

>PF10203 Pet191_N: Cytochrome c oxidase assembly protein PET191; InterPro: IPR018793 This entry represents a family of conserved proteins found from nematodes to humans

Probab=100.00  E-value=6.7e-41  Score=204.77  Aligned_cols=68  Identities=56%  Similarity=1.045  Sum_probs=67.3

Q ss_pred             CchhHHHHHHHHHHHHhcCccccccCCChhHHhcCCCCCChhhHHHHHHHHHhcccCCCCCCccccCC
Q 035162            1 MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRARIRGN   68 (71)
Q Consensus         1 M~~sC~~~r~~L~~Cl~~SdCv~~~~~t~~eCL~~~~~~lp~eC~~lr~~f~eCKR~~lD~r~RfRGn   68 (71)
                      |++||+++++||++||++||||+++++||+|||++++++||+||++|+++||||||||||||+|||||
T Consensus         1 m~~sC~~~~~~L~~Cl~~SdCv~~~~~t~~~Cl~~~~~~~p~eC~~lr~~f~eCKrg~lDmr~RfRGn   68 (68)
T PF10203_consen    1 MSKSCKGIREALAECLQESDCVKKEKRTPKDCLKDPSDELPEECQQLRKAFFECKRGMLDMRKRFRGN   68 (68)
T ss_pred             CCchHHHHHHHHHHHHhhChhhccCCCCHHHHHcCCCCcCCHHHHHHHHHHHHHhcccccccccccCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999998

Cytochrome c oxidase assembly protein Pet191 carries six highly conserved cysteine residues. Pet191 is required for the assembly of active cytochrome c oxidase but does not form part of the final assembled complex [].

>KOG4114 consensus Cytochrome c oxidase assembly protein PET191 [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.9e-37  Score=191.76  Aligned_cols=71  Identities=46%  Similarity=0.840  Sum_probs=68.3

Q ss_pred             CchhHHHHHHHHHHHHhcCccccccCCChhHHhcCC-CCCChhhHHHHHHHHHhcccCCCCCCccccCCCCC
Q 035162            1 MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEK-SPCIPSECVGLRETYFNCKRGQVDMRARIRGNKGY   71 (71)
Q Consensus         1 M~~sC~~~r~~L~~Cl~~SdCv~~~~~t~~eCL~~~-~~~lp~eC~~lr~~f~eCKR~~lD~r~RfRGnkgy   71 (71)
                      |+.||+++|+||+.||++||||+++++||+|||.+. ..+||+||++++++|.+|||||||||+||||++||
T Consensus         1 ~g~sC~~~r~alk~Cl~~S~Cv~v~~ks~reCldn~~~~~vPeeC~al~~af~dCKRslvDmrkRfrgrkg~   72 (73)
T KOG4114|consen    1 MGASCKDQRKALKICLLRSDCVMVERKSPRECLDNPELKDVPEECIALMKAFLDCKRSLVDMRKRFRGRKGT   72 (73)
T ss_pred             CcccHHHHHHHHHHHHhcCcceeeecCCHHHHhcCCccccCcHHHHHHHHHHHHHHHHHHHHHHHHccccCC
Confidence            789999999999999999999999999999999875 56799999999999999999999999999999997

>PF06747 CHCH: CHCH domain; InterPro: IPR010625 A conserved motif was identified in the LOC118487 protein was called the CHCH motif

Probab=85.65  E-value=0.46  Score=24.33  Aligned_cols=28  Identities=21%  Similarity=0.382  Sum_probs=21.2

Q ss_pred             ChhHHhcCCCCCChhhHHHHHHHHHhccc
Q 035162           28 SFRECAGEKSPCIPSECVGLRETYFNCKR   56 (71)
Q Consensus        28 t~~eCL~~~~~~lp~eC~~lr~~f~eCKR   56 (71)
                      .+-+||+++..+ .+.|..+..+|.+|+.
T Consensus         7 ~~~~Cl~~n~~~-~~~C~~~~~~~~~C~~   34 (35)
T PF06747_consen    7 AYLACLKENNFD-WSKCRKEFKAYKECRM   34 (35)
T ss_dssp             HHHHHHHCH-SS-TCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHCCCc-HHhhHHHHHHHHHHhh
Confidence            356788765433 7799999999999975

Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11 kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation []. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit []. The CHCH domain was previously called DUF657 []. ; PDB: 2ZXT_A 3A3C_A 2L0Y_A 2K3J_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	71
1hp8_A	68	HU-P8; leukemia, cysteine motif; NMR {Homo sapiens	84.71

>1hp8_A HU-P8; leukemia, cysteine motif; NMR {Homo sapiens} SCOP: a.17.1.1 PDB: 2hp8_A

Probab=84.71  E-value=0.65  Score=27.64  Aligned_cols=34  Identities=15%  Similarity=0.341  Sum_probs=25.6

Q ss_pred             hhHHhcCCCCCChhhHHHHHHHHHhcccCCCCCCc
Q 035162           29 FRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA   63 (71)
Q Consensus        29 ~~eCL~~~~~~lp~eC~~lr~~f~eCKR~~lD~r~   63 (71)
                      +++||..+ ..-++.|+.+..++.+|++..++.|+
T Consensus        14 iQ~CL~~N-~yd~skCq~~id~L~eCc~~~~~~~S   47 (68)
T 1hp8_A           14 IQKCLQAN-SYMESKCQAVIQELRKCCAQYPKGRS   47 (68)
T ss_dssp             HHHHHHHT-TTCHHHHHHHHHHHHHHHTTSCGGGC
T ss_pred             HHHHHHHc-CCcHHHHHHHHHHHHHHHHHHccCCC
Confidence            45555432 35788999999999999998776554

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00