Citrus Sinensis ID: 035814

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420--
Protein Sequence
MEERLWSKQWKMKKIDWQACAGVTGLAMLKNGTKAQLAGNDGSRIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDHGYVYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVDGVKIDPPAHSLNYSLPGMRSLKPWLFEAPQTRRAPAQNYQAFEA
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEccHHHHHccHHHHHHHHHHHHHHHHHccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHcHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEcccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHcccccHHHHHccc
Coil and Loop (DISEMBL)
MEERLWSKQWKMKKIDWQACAGVTGlamlkngtkaqlagndgsriKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIqkknslgtLTLESLANdfsnlkckvshsymiyhlspvayslAFPLFIrtfqgwdplqnpsyqLELVSMWRQVLDSDHGYVYYAQLVSQAILPAvrassisnwdakdpepmlkFLDCWKMLLPYSLLNTILDtivmpkmsdvvdswdprsetysihDWVHqwlpwlgrkqKGLFRMILIKLGEvldawhpsdasayiLLSPWKNVLWEQLMHRYIVPKLQVTVQEleinpanqkLYQFHWVMSwasaipsspndfEEIRKWYKGWKDLLPQELVANESIRAQLSIGVDMigkavdgvkidppahslnyslpgmrslkpwlfeapqtrrapaqnyqafea
Flexible Loop (DISEMBL)
meerlwskqwkmkkidwQACAGVTGLAMLKNGTKAqlagndgsrikKETAFCLQRNKDKFDKMRAAEKqkfddaetvlNTLDQIQKKNSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDHGYVYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVDGVKIDPPAHSLNYSLPGMRSLKPWLFEAPQTRRAPAqnyqafea
Low Complexity Region (SEG)
MEERLWSKQWKMKKIDWQACAGVTGLAMLKNGTKAQLAGNDGSRIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDHGYVYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVDGVKIDPPAHSLNYSLPGMRSLKPWLFEAPQTRRAPAQNYQAFEA
Disordered region (IsUnstruct)
****LWSKQWKMKKIDWQACAGVTGLAMLKNGTKAQL***********TAFCL***********************VLNTLDQIQKKNSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDHGYVYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVDGVKIDPPAHSLNYSLPGMRSLKPWLF******************
Disordered Region (DISOPRED)
*****************QACAGVTGLAMLKNGTKAQLA***********************************AETVLNTLDQIQKKNSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDHGYVYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAV*********************************************
Disordered Region (DISEMBL)
*********WKMKKIDWQACAGVTGLAMLKNGTKAQLAGNDGSRIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDHGYVYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVDGVKIDPPAHSLNYSLPGMRSLKPWLFEAPQTRRAPAQNYQAFEA
Disordered Region (DISPRO)
**ERLWSKQWKMKKIDWQACAGVTGLAMLKNGTKAQLAGNDGSRIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDHGYVYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVDGVKIDP**HS***********K**L*******************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEERLWSKQWKMKKIDWQACAGVTGLAMLKNGTKAQLAGNDGSRIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDHGYVYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVDGVKIDPPAHSLNYSLPGMRSLKPWLFEAPQTRRAPAQNYQAFEA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	422	2.2.26 [Sep-21-2011]
Q9ERA6	838	Tuftelin-interacting prot	yes	no	0.909	0.458	0.303	3e-53
Q5U2Y6	837	Tuftelin-interacting prot	yes	no	0.909	0.458	0.301	1e-52
Q0IIX9	825	Tuftelin-interacting prot	yes	no	0.909	0.465	0.294	3e-52
Q06AK6	836	Tuftelin-interacting prot	yes	no	0.909	0.459	0.296	1e-51
Q5R5K8	837	Tuftelin-interacting prot	yes	no	0.909	0.458	0.294	1e-51
Q9UBB9	837	Tuftelin-interacting prot	yes	no	0.909	0.458	0.292	2e-51
A1XD93	837	Tuftelin-interacting prot	yes	no	0.909	0.458	0.292	2e-51
A1XD94	837	Tuftelin-interacting prot	yes	no	0.909	0.458	0.292	2e-51
A1XD95	837	Tuftelin-interacting prot	N/A	no	0.909	0.458	0.290	4e-51
Q29RR5	837	Tuftelin-interacting prot	yes	no	0.909	0.458	0.299	5e-51

>sp|Q9ERA6|TFP11_MOUSE Tuftelin-interacting protein 11 OS=Mus musculus GN=Tfip11 PE=1 SV=1

 Score =  209 bits (533), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/431 (30%), Positives = 221/431 (51%), Gaps = 47/431 (10%)

Query: 26  LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
           L +L   T+ ++  +D   + +++    L    +K  ++ A E++   +   VL  +++ 
Sbjct: 325 LQLLIERTEQEIIQSDRQLQYERDMVVSLSHELEKTAEVLAHEERVISNLSKVLALVEEC 384

Query: 85  QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
           +++   +    LTL+  A  F  L+ K    Y +   + +A ++ +PL    F+ W PL+
Sbjct: 385 ERRMQPHGADPLTLDECARIFETLQDKYYEEYRLADRADLAVAIVYPLVKDYFKDWHPLE 444

Query: 142 NPSYQLELVSMWRQVLDSDHGYVYYAQ-LVSQAI--------LPAVRASSISNWDAKDPE 192
           + SY  +++S W+ +L++D    + +Q L S A         +P VR + ++ W  ++ E
Sbjct: 445 DGSYGTQIISKWKSLLENDQLLSHSSQDLSSDAFHRLMWEVWMPFVR-NVVAQWQPRNCE 503

Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
           PM+ FLD W  ++P  +L+ ILD ++ PK+   VD+W+P ++T  IH W+H WLP +  +
Sbjct: 504 PMVDFLDSWAHIIPVWILDNILDQLIFPKLQKEVDNWNPLTDTVPIHSWIHPWLPLMQAR 563

Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
            + L+  +  KL   L  WHPSDASA ++L PWK VL    WE  M R IVPKL + + E
Sbjct: 564 LEPLYSPVRSKLSSALQKWHPSDASAKLILQPWKEVLTPGSWEAFMLRNIVPKLGMCLGE 623

Query: 309 LEINPANQKLYQFHWVMSWASAI-------------------------PSSPNDFEEIRK 343
           L INP  Q +  F+WVM W   I                          +SPN +EEI K
Sbjct: 624 LVINPHQQHMDAFYWVMDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNSPN-YEEITK 682

Query: 344 WYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSLK 400
           WY GWK +   +++A+ S++ + +  +D++ +AV    G  + P A      L      K
Sbjct: 683 WYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERRK 742

Query: 401 PWLFEAPQTRR 411
            + +EA Q RR
Sbjct: 743 DFQYEAMQERR 753

May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extracellular matrix. May also be involved in pre-mRNA splicing.
Mus musculus (taxid: 10090)

>sp|Q5U2Y6|TFP11_RAT Tuftelin-interacting protein 11 OS=Rattus norvegicus GN=Tfip11 PE=2 SV=1

 Score =  207 bits (527), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 220/431 (51%), Gaps = 47/431 (10%)

Query: 26  LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
           L +L   T+ ++  +D   + +++    L    +K  ++ A E++   +   VL  +++ 
Sbjct: 324 LQLLIERTEQEIIQSDRQLQYERDMVVSLSHELEKTAEVLAHEERVISNLSKVLALVEEC 383

Query: 85  QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
           + +   +    LTL+  A  F  L+ K    Y +   + +A ++ +PL    F+ W PL+
Sbjct: 384 EHRMQPHGADPLTLDECARIFETLQDKYYEEYRLADRADLAVAIVYPLVKDYFKDWHPLE 443

Query: 142 NPSYQLELVSMWRQVLDSDHGYVYYAQ-LVSQAI--------LPAVRASSISNWDAKDPE 192
           + +Y  +++S W+ +L++D    + +Q L S A         +P VR + ++ W  ++ E
Sbjct: 444 DSNYGTQIISKWKSLLENDQLLSHSSQDLSSDAFHRLMWEVWMPFVR-NVVAQWQPRNCE 502

Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
           PM+ FLD W  ++P  +L+ ILD ++ PK+   VD+W+P ++T  IH W+H WLP +  +
Sbjct: 503 PMVDFLDSWAHIIPVWILDNILDQLIFPKLQKEVDNWNPLTDTVPIHSWIHPWLPLMQAR 562

Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
            + L+  +  KL   L  WHPSDASA ++L PWK VL    WE  M R IVPKL + + E
Sbjct: 563 LEPLYSPVRSKLSSALQKWHPSDASAKLILQPWKEVLTPGSWEAFMLRNIVPKLGMCLGE 622

Query: 309 LEINPANQKLYQFHWVMSWASAI-------------------------PSSPNDFEEIRK 343
           L INP  Q +  F+WVM W   I                          +SPN +EEI K
Sbjct: 623 LVINPHQQHMDAFYWVMDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNSPN-YEEITK 681

Query: 344 WYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSLK 400
           WY GWK +   +++A+ S++ + +  +D++ +AV    G  + P A      L      K
Sbjct: 682 WYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERRK 741

Query: 401 PWLFEAPQTRR 411
            + +EA Q RR
Sbjct: 742 DFQYEAMQERR 752

May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extracellular matrix. May also be involved in pre-mRNA splicing.

Rattus norvegicus (taxid: 10116)

>sp|Q0IIX9|TFP11_XENTR Tuftelin-interacting protein 11 OS=Xenopus tropicalis GN=tfip11 PE=2 SV=2

 Score =  206 bits (524), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 218/431 (50%), Gaps = 47/431 (10%)

Query: 26  LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
           L +L + T+ ++  ND   + +++    L    +K  ++   E++   +   VL T+++ 
Sbjct: 313 LQLLIDMTEQEIIQNDRQLQYEQDMVVNLTHELEKLSEVLEREEKAIQNLSKVLETVEEC 372

Query: 85  QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
           +++        LTLE  A  F  L+ K    Y +   + ++ ++ +PL    F+ W+PL+
Sbjct: 373 ERRIQPMCDNPLTLEECARIFEMLQDKYYEEYKMSEKADLSVAIVYPLMKDYFKDWNPLR 432

Query: 142 NPSYQLELVSMWRQVLDSDHGYVY---------YAQLVSQAILPAVRASSISNWDAKDPE 192
           +P+Y  +++S W+ +L+  H   +         Y +L+ +  +P +R S I+ W  ++  
Sbjct: 433 DPTYGTDVMSKWKNLLEEGHLLSHSAHDASMDPYHRLLWETWVPLLR-SIIAQWQPRNCA 491

Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
           PM+ FLDCW  LLP  +L+ ILD ++ PK+   V++W+P ++T  IH W+H WLP +  +
Sbjct: 492 PMVDFLDCWVHLLPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQSR 551

Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
            + LF  I  KL   L  WHPSD+SA ++L PWK V     WE  M + I+PKL + + E
Sbjct: 552 LEPLFSPIRNKLANALQKWHPSDSSAKLILQPWKEVFTPGSWEAFMVKNILPKLGMCLSE 611

Query: 309 LEINPANQKLYQFHWVMSWASAI-------------------------PSSPNDFEEIRK 343
             INP  Q +  FHWV  W   +                          ++PN +EEI K
Sbjct: 612 FVINPHQQHMEVFHWVTDWEGMVSLSSIVGILEKHFFPKWLQVLCSWLSNNPN-YEEITK 670

Query: 344 WYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSLK 400
           WY GWK +    ++A+ +I+ + +  +D++ +AV    G  + P A      L      K
Sbjct: 671 WYLGWKSMFSDLVLAHPAIKDKFNEALDIMNRAVSSSVGAYMQPGARESIAYLTQTERRK 730

Query: 401 PWLFEAPQTRR 411
            + +EA Q RR
Sbjct: 731 DFQYEAMQERR 741

May be involved in pre-mRNA splicing.

Xenopus tropicalis (taxid: 8364)

>sp|Q06AK6|TFP11_PIG Tuftelin-interacting protein 11 OS=Sus scrofa GN=TFIP11 PE=2 SV=1

 Score =  204 bits (519), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 221/431 (51%), Gaps = 47/431 (10%)

Query: 26  LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
           L +L   T+ ++  ND   + +++    L    +K  ++   E++   +   VL  +++ 
Sbjct: 323 LQLLIELTEQEIIQNDRQLQYERDMVVNLSHELEKMAEVLEHEERVISNLSKVLEMVEEC 382

Query: 85  QKKNSLGT---LTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
           +++   G    LTL+  A  F  L+ K    Y +     +A ++ +PL    F+ WDPL+
Sbjct: 383 ERRLQPGCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKDYFKEWDPLK 442

Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
           + +Y  E++S W+ +L++D    HG        + +L+ +  +P VR + ++ W  ++ +
Sbjct: 443 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 501

Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
           PM+ FLD W  ++P  +L+ ILD +V PK+   V++W+P ++T  IH W+H WLP +  +
Sbjct: 502 PMVDFLDSWVHIIPVWILDNILDQLVFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 561

Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
            + L+  I  KL   L  WHPSD+SA ++L PWK+V     WE  M + IVPKL + + E
Sbjct: 562 LEPLYSPIRSKLASALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 621

Query: 309 LEINPANQKLYQFHWVMSWASAI-------------------------PSSPNDFEEIRK 343
           L INP  Q +  F+WV+ W   I                          +SPN +EEI K
Sbjct: 622 LVINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNSPN-YEEITK 680

Query: 344 WYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSLK 400
           WY GWK +   +++A+ S++ + +  +D++ +AV    G  + P A      L      K
Sbjct: 681 WYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERRK 740

Query: 401 PWLFEAPQTRR 411
            + +EA Q RR
Sbjct: 741 DFQYEAMQERR 751

May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extracellular matrix. May also be involved in pre-mRNA splicing.

Sus scrofa (taxid: 9823)

>sp|Q5R5K8|TFP11_PONAB Tuftelin-interacting protein 11 OS=Pongo abelii GN=TFIP11 PE=2 SV=1

 Score =  204 bits (518), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 222/431 (51%), Gaps = 47/431 (10%)

Query: 26  LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
           L +L + T+ ++  ND   + +++    L    +K  ++   E++   +   VL  +++ 
Sbjct: 324 LQLLIDLTEQEIIQNDRQLQYERDMVVNLFHELEKMTEVLDHEERVIFNLSKVLEMVEEC 383

Query: 85  QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
           +++   N    LTL+  A  F  L+ K    Y +     +A ++ +PL    F+ WDPL+
Sbjct: 384 ERRMQPNCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLK 443

Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
           + +Y  E++S W+ +L++D    HG        + +L+ +  +P VR + ++ W  ++ +
Sbjct: 444 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 502

Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
           PM+ FLD W  ++P  +L+ ILD ++ PK+   V++W+P ++T  IH W+H WLP +  +
Sbjct: 503 PMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 562

Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
            + L+  I  KL   L  WHPSD+SA ++L PWK+V     WE  M + IVPKL + + E
Sbjct: 563 LEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622

Query: 309 LEINPANQKLYQFHWVMSWASAI-------------------------PSSPNDFEEIRK 343
           L INP  Q +  F+WV+ W   I                          +SPN +EEI K
Sbjct: 623 LVINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNSPN-YEEITK 681

Query: 344 WYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSLK 400
           WY GWK +   +++A+ S++ + +  +D++ +AV    G  + P A      L      K
Sbjct: 682 WYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERRK 741

Query: 401 PWLFEAPQTRR 411
            + +EA Q RR
Sbjct: 742 DFQYEAMQERR 752

May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extracellular matrix. May also be involved in pre-mRNA splicing.

Pongo abelii (taxid: 9601)

>sp|Q9UBB9|TFP11_HUMAN Tuftelin-interacting protein 11 OS=Homo sapiens GN=TFIP11 PE=1 SV=1

 Score =  203 bits (516), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 222/431 (51%), Gaps = 47/431 (10%)

Query: 26  LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
           L +L + T+ ++  ND   + +++    L    +K  ++   E++   +   VL  +++ 
Sbjct: 324 LQLLIDLTEQEIIQNDRQLQYERDMVVNLFHELEKMTEVLDHEERVISNLSKVLEMVEEC 383

Query: 85  QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
           +++   +    LTL+  A  F  L+ K    Y +     +A ++ +PL    F+ WDPL+
Sbjct: 384 ERRMQPDCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLK 443

Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
           + +Y  E++S W+ +L++D    HG        + +L+ +  +P VR + ++ W  ++ +
Sbjct: 444 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 502

Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
           PM+ FLD W  ++P  +L+ ILD ++ PK+   V++W+P ++T  IH W+H WLP +  +
Sbjct: 503 PMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 562

Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
            + L+  I  KL   L  WHPSD+SA ++L PWK+V     WE  M + IVPKL + + E
Sbjct: 563 LEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622

Query: 309 LEINPANQKLYQFHWVMSWASAI-------------------------PSSPNDFEEIRK 343
           L INP  Q +  F+WV+ W   I                          +SPN +EEI K
Sbjct: 623 LVINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNSPN-YEEITK 681

Query: 344 WYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSLK 400
           WY GWK +   +++A+ S++ + +  +D++ +AV    G  + P A      L      K
Sbjct: 682 WYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERRK 741

Query: 401 PWLFEAPQTRR 411
            + +EA Q RR
Sbjct: 742 DFQYEAMQERR 752

May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extracellular matrix. May also be involved in pre-mRNA splicing.

Homo sapiens (taxid: 9606)

>sp|A1XD93|TFP11_PANTR Tuftelin-interacting protein 11 OS=Pan troglodytes GN=TFIP11 PE=2 SV=1

 Score =  203 bits (516), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 222/431 (51%), Gaps = 47/431 (10%)

Query: 26  LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
           L +L + T+ ++  ND   + +++    L    +K  ++   E++   +   VL  +++ 
Sbjct: 324 LQLLIDLTEQEIIQNDRQLQYERDMVVNLFHELEKMTEVLDHEERVISNLSKVLEMVEEC 383

Query: 85  QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
           +++   +    LTL+  A  F  L+ K    Y +     +A ++ +PL    F+ WDPL+
Sbjct: 384 ERRMQPDCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLR 443

Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
           + +Y  E++S W+ +L++D    HG        + +L+ +  +P VR + ++ W  ++ +
Sbjct: 444 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 502

Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
           PM+ FLD W  ++P  +L+ ILD ++ PK+   V++W+P ++T  IH W+H WLP +  +
Sbjct: 503 PMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 562

Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
            + L+  I  KL   L  WHPSD+SA ++L PWK+V     WE  M + IVPKL + + E
Sbjct: 563 LEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622

Query: 309 LEINPANQKLYQFHWVMSWASAI-------------------------PSSPNDFEEIRK 343
           L INP  Q +  F+WV+ W   I                          +SPN +EEI K
Sbjct: 623 LVINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNSPN-YEEITK 681

Query: 344 WYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSLK 400
           WY GWK +   +++A+ S++ + +  +D++ +AV    G  + P A      L      K
Sbjct: 682 WYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERRK 741

Query: 401 PWLFEAPQTRR 411
            + +EA Q RR
Sbjct: 742 DFQYEAMQERR 752

May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extracellular matrix. May also be involved in pre-mRNA splicing.

Pan troglodytes (taxid: 9598)

>sp|A1XD94|TFP11_MACMU Tuftelin-interacting protein 11 OS=Macaca mulatta GN=TFIP11 PE=2 SV=1

 Score =  203 bits (516), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 222/431 (51%), Gaps = 47/431 (10%)

Query: 26  LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
           L +L + T+ ++  ND   + +++    L    +K  ++   E++   +   VL  +++ 
Sbjct: 324 LQLLIDLTEQEIIQNDRQLQYERDMVVNLFHELEKMTEVLDHEERVISNLSKVLEMVEEC 383

Query: 85  QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
           +++   +    LTL+  A  F  L+ K    Y +     +A ++ +PL    F+ WDPL+
Sbjct: 384 ERRMQPDCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLK 443

Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
           + +Y  E++S W+ +L++D    HG        + +L+ +  +P VR + ++ W  ++ +
Sbjct: 444 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 502

Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
           PM+ FLD W  ++P  +L+ ILD ++ PK+   V++W+P ++T  IH W+H WLP +  +
Sbjct: 503 PMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 562

Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
            + L+  I  KL   L  WHPSD+SA ++L PWK+V     WE  M + IVPKL + + E
Sbjct: 563 LEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622

Query: 309 LEINPANQKLYQFHWVMSWASAI-------------------------PSSPNDFEEIRK 343
           L INP  Q +  F+WV+ W   I                          +SPN +EEI K
Sbjct: 623 LVINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNSPN-YEEITK 681

Query: 344 WYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSLK 400
           WY GWK +   +++A+ S++ + +  +D++ +AV    G  + P A      L      K
Sbjct: 682 WYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERRK 741

Query: 401 PWLFEAPQTRR 411
            + +EA Q RR
Sbjct: 742 DFQYEAMQERR 752

May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extracellular matrix. May also be involved in pre-mRNA splicing.

Macaca mulatta (taxid: 9544)

>sp|A1XD95|TFP11_MACFA Tuftelin-interacting protein 11 OS=Macaca fascicularis GN=TFIP11 PE=2 SV=1

 Score =  202 bits (514), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 222/431 (51%), Gaps = 47/431 (10%)

Query: 26  LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
           L +L + T+ ++  ND   + +++    L    +K  ++   E++   +   VL  +++ 
Sbjct: 324 LQLLIDLTEQEIIQNDRQLQYERDMVVNLFHELEKMTEVLDHEERVISNLSKVLEMVEEC 383

Query: 85  QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
           +++   +    LTL+  A  F  L+ K    Y +     +A ++ +PL    F+ WDPL+
Sbjct: 384 ERRMQPDCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLK 443

Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
           + +Y  E++S W+ +L++D    HG        + +L+ +  +P VR + ++ W  ++ +
Sbjct: 444 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 502

Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
           PM+ FLD W  ++P  +L+ ILD ++ PK+   V++W+P ++T  IH W+H WLP +  +
Sbjct: 503 PMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 562

Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
            + L+  I  KL   L  WHPSD+SA ++L PWK+V     WE  M + IVPKL + + E
Sbjct: 563 LEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622

Query: 309 LEINPANQKLYQFHWVMSWASAI-------------------------PSSPNDFEEIRK 343
           L INP  Q +  F+WV+ W   I                          +SPN +EEI K
Sbjct: 623 LVINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNSPN-YEEITK 681

Query: 344 WYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSLK 400
           WY GWK +   +++A+ S++ + +  +D++ +AV    G  + P A      L      K
Sbjct: 682 WYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERRK 741

Query: 401 PWLFEAPQTRR 411
            + +EA + RR
Sbjct: 742 DFQYEATRERR 752

May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extracellular matrix. May also be involved in pre-mRNA splicing.

Macaca fascicularis (taxid: 9541)

>sp|Q29RR5|TFP11_BOVIN Tuftelin-interacting protein 11 OS=Bos taurus GN=TFIP11 PE=2 SV=2

 Score =  202 bits (513), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 217/431 (50%), Gaps = 47/431 (10%)

Query: 26  LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
           L +L   T+ ++  ND   + +++    L    +K       E++       VL  +++ 
Sbjct: 324 LQLLIELTEQEIIRNDRQLQYERDVVVNLTHELEKASGALQQEQRAIASLSEVLALVEEC 383

Query: 85  QKKNSLGT---LTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
           +++   G    LTL+  A  F  L+ K    Y +     +A ++ +PL    F+ WDPL+
Sbjct: 384 ERRLQPGCSDPLTLDECARVFQTLRDKYYEEYRMSDRVDLAVAIVYPLMKDYFKEWDPLK 443

Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
           + +Y  E +S W+ +L++D    HG        + +L+ +  +P VR S ++ W  ++ +
Sbjct: 444 DCTYGTETISQWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-SIVAQWQPRNCD 502

Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
           PM+ FLD W  L+P  +L+ IL+ ++ PK+   V+SW+P ++T  IH WVH WLP +  +
Sbjct: 503 PMVDFLDSWAPLIPVWVLDNILEQLIFPKLQKEVESWNPLTDTVPIHSWVHPWLPLMQAR 562

Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
            + L+  I  KL   L  WHPSD+SA ++L PWK+V     WE  M + IVPKL + + E
Sbjct: 563 LEPLYSPIRSKLASALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622

Query: 309 LEINPANQKLYQFHWVMSWASAI-------------------------PSSPNDFEEIRK 343
           L INP  Q +  F+WV+ W   +                          +SPN +EEI K
Sbjct: 623 LVINPHQQHMDAFYWVIDWEGMVSVSSLVGLLEKHFFPKWLQVLCSWLSNSPN-YEEITK 681

Query: 344 WYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSLK 400
           WY GWK +   +++A+ S++ + +  +D++ +AV    G  + P A      L      K
Sbjct: 682 WYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGAREHIAYLTHTERRK 741

Query: 401 PWLFEAPQTRR 411
            + +EA Q RR
Sbjct: 742 DFQYEAMQERR 752

May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extracellular matrix. May also be involved in pre-mRNA splicing.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	422
224126163	845	predicted protein [Populus trichocarpa]	0.881	0.440	0.493	1e-105
356559565	862	PREDICTED: tuftelin-interacting protein	0.850	0.416	0.488	1e-102
449514938	872	PREDICTED: LOW QUALITY PROTEIN: tuftelin	0.850	0.411	0.488	1e-101
449468289	871	PREDICTED: tuftelin-interacting protein	0.850	0.412	0.488	1e-101
297844642	849	D111/G-patch domain-containing protein [	0.819	0.407	0.484	1e-100
225454601	852	PREDICTED: tuftelin-interacting protein	0.848	0.420	0.488	7e-99
224144895	690	predicted protein [Populus trichocarpa]	0.810	0.495	0.490	8e-98
297737221	739	unnamed protein product [Vitis vinifera]	0.791	0.451	0.504	3e-97
15220011	849	tuftelin-interacting protein 11 [Arabido	0.819	0.407	0.471	3e-95
255566080	883	tuftelin interacting protein, putative [	0.886	0.423	0.449	4e-94

>gi|224126163|ref|XP_002319771.1| predicted protein [Populus trichocarpa] gi|222858147|gb|EEE95694.1| predicted protein [Populus trichocarpa]

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/411 (49%), Positives = 272/411 (66%), Gaps = 39/411 (9%)

Query: 44  RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFS 103
           R ++ETA  LQ+ K+K +   A +K++ D+ E ++  L  I+++ S GTLTL+SLA  F+
Sbjct: 344 RNERETAMSLQQEKEKLETEAARQKKQLDNVEEIMGVLSHIEEQKSSGTLTLDSLAKYFT 403

Query: 104 NLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDHG- 162
           ++K K +  Y + +LS VA S A PLFIR FQGWDPL+NP + LE+V +W+ VL  +   
Sbjct: 404 DIKRKFAEDYKLCNLSCVACSYALPLFIRVFQGWDPLRNPLHGLEVVELWKNVLQGEESS 463

Query: 163 -----YVYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTI 217
                   YAQLV++ +LPAVR S I+ W+ +DPEPML+FL+ W+ LLP +++ +ILD I
Sbjct: 464 DIWDEVAPYAQLVTEVVLPAVRISGINTWEPRDPEPMLRFLESWENLLPAAVVQSILDNI 523

Query: 218 VMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDAS 277
           VMPK+S  VDSWDPR ET  IH WVH WL  LG K +GL++MI +KL  VLDAWHPSDAS
Sbjct: 524 VMPKLSSAVDSWDPRRETVPIHVWVHPWLLQLGLKLEGLYQMIRMKLSMVLDAWHPSDAS 583

Query: 278 AYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIP- 332
           AY +LSPWK V     WE LM R+IVPKLQV +QE +INPANQKL QF+WVMSWASAIP 
Sbjct: 584 AYTILSPWKTVFDAASWENLMRRFIVPKLQVALQEFQINPANQKLDQFYWVMSWASAIPI 643

Query: 333 ------------------------SSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSI 368
                                   S+PN  +E+ KWY GWK LLPQEL A+E+IR Q ++
Sbjct: 644 HLMVDLMERFFFSKWLQVLYHWLCSNPN-LQEVHKWYIGWKGLLPQELQAHENIRYQFTL 702

Query: 369 GVDMIGKAVDGVKIDPPAHSLNYSLPGMRSLKPWLFEAPQTRRAPAQNYQA 419
           G++MI +A++G+++  P   L  +L  +R+ +   FEA Q R A    YQ 
Sbjct: 703 GLNMIDRAIEGMEVVQPG--LRENLSYIRAQEQRQFEA-QQRAAMHSQYQT 750

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559565|ref|XP_003548069.1| PREDICTED: tuftelin-interacting protein 11-like [Glycine max]

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 194/397 (48%), Positives = 267/397 (67%), Gaps = 38/397 (9%)

Query: 44  RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFS 103
           R ++ETA  L+  K+K +     +K++ D+ E +++ LD++ ++N+LGTLTL+SLA  F 
Sbjct: 365 RRERETALSLKNEKEKLETETVFQKKQLDNMEEIMSVLDRVGEENTLGTLTLDSLAQYFR 424

Query: 104 NLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDHGY 163
           +L  + + +Y + +LS +A S A PLFIR FQGWDPL+NPS+ LELVS W+ +L+ +  +
Sbjct: 425 DLLKRSADNYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSQWKALLEGEDYF 484

Query: 164 VY------YAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTI 217
                   Y QLVS+ +LPAVR S I+ W A+DPEPML FL+ W+ LLP S+L TILD I
Sbjct: 485 DIWDVSSPYTQLVSEVVLPAVRISGINTWQARDPEPMLWFLESWEKLLPSSVLATILDNI 544

Query: 218 VMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDAS 277
           VMPK+S  VD+W+P  ET  IH WVH WLP LG K +G++++I  KL  VL AWHPSD S
Sbjct: 545 VMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGNKLEGIYQVIRFKLSTVLGAWHPSDGS 604

Query: 278 AYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIP- 332
           AY +LSPWK V     WEQLM R+IVPKLQ+ +QE ++NPA+Q + QF+WVM+WASAIP 
Sbjct: 605 AYAILSPWKTVFDSASWEQLMLRFIVPKLQLVLQEFQVNPASQNIDQFYWVMNWASAIPI 664

Query: 333 ------------------------SSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSI 368
                                   S+PN FEE+ KWY GWK+L+P+EL+ANESIR QL+ 
Sbjct: 665 HLMVDMMDKFFFAKWLQVLYHWLCSNPN-FEEVTKWYLGWKELIPKELLANESIRYQLNR 723

Query: 369 GVDMIGKAVDGVKIDPPAHSLNYSLPGMRSLKPWLFE 405
           G+DM+ +AV+G+++  P    N S   +R L+   FE
Sbjct: 724 GLDMMNQAVEGMEVVQPGLKENISY--LRVLEQRQFE 758

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449514938|ref|XP_004164520.1| PREDICTED: LOW QUALITY PROTEIN: tuftelin-interacting protein 11-like [Cucumis sativus]

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/397 (48%), Positives = 263/397 (66%), Gaps = 38/397 (9%)

Query: 44  RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFS 103
           R +KETA  LQ  K K +   A +K++ +  E +++T+++I + NS GTLTL+ LA  FS
Sbjct: 372 RNEKETALSLQEEKQKLEIELARQKKQLNSMEEIMSTIERIGEDNSAGTLTLDGLAKCFS 431

Query: 104 NLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVL-DSDHG 162
            L+ K    Y + +LS +A S A PL IR FQGWDPLQNPS+ LE++S+W+ +L D D  
Sbjct: 432 GLRRKFGEDYKLCNLSCIACSFALPLLIRVFQGWDPLQNPSHGLEVISLWKMLLQDEDCV 491

Query: 163 YVY-----YAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTI 217
            ++     Y  LVS+ +LPAVR S I+ W A+DPEPML+FL+ W+ LLP S+L+T+LD +
Sbjct: 492 DIWDMTSPYTLLVSEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPPSVLHTVLDNV 551

Query: 218 VMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDAS 277
           VMPK++  VD W+P+ +   IH WVH WLP LG K +G++++I  KL  VL AWHPSDAS
Sbjct: 552 VMPKLASAVDLWEPQRDPVPIHMWVHPWLPLLGHKLEGMYQVIRTKLSFVLGAWHPSDAS 611

Query: 278 AYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIP- 332
           AY +LSPWK V     WEQLM R+IVPKLQ+ +QE ++NP NQKL QF+WV SWASA+P 
Sbjct: 612 AYTILSPWKAVFDSGSWEQLMRRFIVPKLQLVLQEFQVNPGNQKLDQFYWVTSWASALPI 671

Query: 333 ------------------------SSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSI 368
                                   S+PN FEE+ KWY GWK+L P+EL+ANESIR QLS 
Sbjct: 672 HLMVDMMEKFFFSKWLQVLYHWLCSNPN-FEEVTKWYMGWKELFPKELLANESIRYQLSC 730

Query: 369 GVDMIGKAVDGVKIDPPAHSLNYSLPGMRSLKPWLFE 405
           G+DM+ +AV+G+++  P    N S   +R L+   FE
Sbjct: 731 GLDMMNQAVEGMEVVQPGLKENISY--LRVLEQRQFE 765

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449468289|ref|XP_004151854.1| PREDICTED: tuftelin-interacting protein 11-like [Cucumis sativus]

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/397 (48%), Positives = 263/397 (66%), Gaps = 38/397 (9%)

Query: 44  RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFS 103
           R +KETA  LQ  K K +   A +K++ +  E +++T+++I + NS GTLTL+ LA  FS
Sbjct: 371 RNEKETALSLQEEKQKLEIELARQKKQLNSMEEIMSTIERIGEDNSAGTLTLDGLAKCFS 430

Query: 104 NLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVL-DSDHG 162
            L+ K    Y + +LS +A S A PL IR FQGWDPLQNPS+ LE++S+W+ +L D D  
Sbjct: 431 GLRRKFGEDYKLCNLSCIACSFALPLLIRVFQGWDPLQNPSHGLEVISLWKMLLQDEDCV 490

Query: 163 YVY-----YAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTI 217
            ++     Y  LVS+ +LPAVR S I+ W A+DPEPML+FL+ W+ LLP S+L+T+LD +
Sbjct: 491 DIWDMTSPYTLLVSEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPPSVLHTVLDNV 550

Query: 218 VMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDAS 277
           VMPK++  VD W+P+ +   IH WVH WLP LG K +G++++I  KL  VL AWHPSDAS
Sbjct: 551 VMPKLAGAVDLWEPQRDPVPIHMWVHPWLPLLGHKLEGMYQVIRTKLSFVLGAWHPSDAS 610

Query: 278 AYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIP- 332
           AY +LSPWK V     WEQLM R+IVPKLQ+ +QE ++NP NQKL QF+WV SWASA+P 
Sbjct: 611 AYTILSPWKAVFDSGSWEQLMRRFIVPKLQLVLQEFQVNPGNQKLDQFYWVTSWASALPI 670

Query: 333 ------------------------SSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSI 368
                                   S+PN FEE+ KWY GWK+L P+EL+ANESIR QLS 
Sbjct: 671 HLMVDMMEKFFFSKWLQVLYHWLCSNPN-FEEVTKWYMGWKELFPKELLANESIRYQLSC 729

Query: 369 GVDMIGKAVDGVKIDPPAHSLNYSLPGMRSLKPWLFE 405
           G+DM+ +AV+G+++  P    N S   +R L+   FE
Sbjct: 730 GLDMMNQAVEGMEVVQPGLKENISY--LRVLEQRQFE 764

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297844642|ref|XP_002890202.1| D111/G-patch domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297336044|gb|EFH66461.1| D111/G-patch domain-containing protein [Arabidopsis lyrata subsp. lyrata]

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/382 (48%), Positives = 252/382 (65%), Gaps = 36/382 (9%)

Query: 44  RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFS 103
           R ++E+A CLQ+ K+        +K+  D+ E + + + +I+ +N+ G LTL+SLAN F 
Sbjct: 369 RNERESALCLQQEKEMLVNEEEKQKRHLDNMEYITDEISRIELENTAGNLTLDSLANRFE 428

Query: 104 NLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDHGY 163
           +L+      Y + +LS +A SLA PLFIR FQGWDPL++P + L+ +S WR++L+ +   
Sbjct: 429 DLQACYPDDYKLCNLSTIACSLALPLFIRMFQGWDPLRDPVHGLKAISSWRKLLEVEEDQ 488

Query: 164 ------VYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTI 217
                   Y+QLVS+ +LPAVR + I+ W+ +DPEPML+FL+ W+ LLP S+L+TILDT+
Sbjct: 489 NIWVVSTPYSQLVSEVVLPAVRIAGINTWEPRDPEPMLRFLETWENLLPSSVLHTILDTV 548

Query: 218 VMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDAS 277
           V+PK+S  V+ WDPR E  +IH WVH WLP LG K + L+++I +KL  VLDAWHPSD+S
Sbjct: 549 VLPKLSTAVEYWDPRRELVAIHVWVHPWLPILGEKLEFLYQIIQMKLSNVLDAWHPSDSS 608

Query: 278 AYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIP- 332
           AY +LSPWK V     WEQLM RYIVPKLQ+ +QE +INPANQ L +FHWVM WASA+P 
Sbjct: 609 AYTILSPWKTVFDTSSWEQLMRRYIVPKLQLALQEFQINPANQNLERFHWVMKWASAVPI 668

Query: 333 ------------------------SSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSI 368
                                   S+P  FEEI  WY GWK+L PQEL ANE IR QL  
Sbjct: 669 HIMADLMGRFFFPKWLDVLYLWLRSNPG-FEEIHGWYLGWKELFPQELSANERIRIQLKR 727

Query: 369 GVDMIGKAVDGVKIDPPAHSLN 390
           G+DM+ +AV+GV++  P    N
Sbjct: 728 GLDMLMEAVEGVEVSQPRARAN 749

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454601|ref|XP_002265002.1| PREDICTED: tuftelin-interacting protein 11-like [Vitis vinifera]

 Score =  367 bits (941), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 195/399 (48%), Positives = 254/399 (63%), Gaps = 41/399 (10%)

Query: 44  RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFS 103
           R ++ET   LQ  K+K  K  A +K + D+ E +++ LD I ++NS+G LTL+SLA  F 
Sbjct: 353 RNERETVVSLQMEKEKLQKEAAHQKTQLDNTEQIVSVLDIISEENSVGKLTLDSLAKYFG 412

Query: 104 NLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLD----- 158
           +L+ + +  Y + +LS +A S A PL IR FQGWDPLQNP + LE++S W+ +L      
Sbjct: 413 DLRRRFAEDYKLCNLSCIACSFALPLLIRVFQGWDPLQNPLHGLEVMSSWKNLLQGGDDI 472

Query: 159 ---SDHGYVYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILD 215
              SD G  Y  QLV + +LPAVR S I+ W A+DPEPML+FL+ W+ LLP S+L T+LD
Sbjct: 473 FDLSDVGSPY-TQLVMEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLQTMLD 531

Query: 216 TIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSD 275
            IV+PK+S  VD WDPR ET  IH WVH WLP LG+K + L+  I  KLG  L AWHPSD
Sbjct: 532 NIVLPKLSSAVDVWDPRRETVPIHVWVHPWLPLLGQKLESLYWKICDKLGNALQAWHPSD 591

Query: 276 ASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAI 331
            SAY +LSPWK V     WE+LM R I+PKL   +QE ++NPA+Q L QFHWVMSWAS I
Sbjct: 592 GSAYTILSPWKTVFDSTSWERLMVRSIIPKLMNVLQEFQVNPASQNLDQFHWVMSWASVI 651

Query: 332 P-------------------------SSPNDFEEIRKWYKGWKDLLPQELVANESIRAQL 366
           P                         S PN FEE+ +WY GWK LLPQEL+ANE IR QL
Sbjct: 652 PIHRMVELLELHFFPKWQQVLYHWLCSGPN-FEEVTQWYLGWKGLLPQELLANEQIRYQL 710

Query: 367 SIGVDMIGKAVDGVKIDPPAHSLNYSLPGMRSLKPWLFE 405
           +IG+DM+ +AV+G+++  P    N S   +R L+   FE
Sbjct: 711 NIGLDMMNQAVEGMEVVQPGLRENISY--LRVLEQRQFE 747

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144895|ref|XP_002325453.1| predicted protein [Populus trichocarpa] gi|222862328|gb|EEE99834.1| predicted protein [Populus trichocarpa]

 Score =  363 bits (932), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 186/379 (49%), Positives = 251/379 (66%), Gaps = 37/379 (9%)

Query: 44  RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFS 103
           R ++ETA  L + K+K +   A +K++ D+ E +++ +  I+++ S GTLTL+SLA  F+
Sbjct: 192 RNERETAISLHQEKEKLETEAARQKKQLDNMEEIMSVVSHIEEQKSSGTLTLDSLAKYFT 251

Query: 104 N-LKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDHG 162
           + +K K +  Y + +L+ +A S A PLFIR FQGWDPL+NP + LE + +W+ VL  +  
Sbjct: 252 DDIKRKFADDYKLCNLTCIACSYALPLFIRVFQGWDPLRNPLHGLEALELWKSVLQGEES 311

Query: 163 Y------VYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDT 216
                    YAQLVS+ +LPAVR S  S W+ +DPEPML+FL+ W+ L P S++ +IL  
Sbjct: 312 SDIWDESTPYAQLVSEVVLPAVRISGTSTWEPRDPEPMLRFLESWENLFPASVVQSILGN 371

Query: 217 IVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDA 276
           IVMPK+   VDSWDPR ET  IH WVH WLP LG K +GL++MI +KL  VLDAWHPSDA
Sbjct: 372 IVMPKLYSAVDSWDPRLETVPIHVWVHPWLPQLGLKFEGLYQMIRMKLSMVLDAWHPSDA 431

Query: 277 SAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIP 332
           SAY +LSPWK V     WE LM R+IVPKLQV +QE +INPANQKL  F+WVMSWASAIP
Sbjct: 432 SAYTILSPWKTVFDSASWESLMRRFIVPKLQVALQEFQINPANQKLDHFYWVMSWASAIP 491

Query: 333 -------------------------SSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLS 367
                                    S+PN  +EI KWY GWK LLP EL A+E+IR Q +
Sbjct: 492 IHLMVDLLERFFFSKWLQVLYHWLCSNPN-LQEIHKWYVGWKVLLPPELQAHENIRYQFT 550

Query: 368 IGVDMIGKAVDGVKIDPPA 386
           +G++MI +A++G+++  P 
Sbjct: 551 LGLNMIDRAIEGMEVVQPG 569

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737221|emb|CBI26422.3| unnamed protein product [Vitis vinifera]

 Score =  361 bits (927), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 188/373 (50%), Positives = 243/373 (65%), Gaps = 39/373 (10%)

Query: 47  KETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFSNLK 106
           KET   LQ  K+K  K  A +K + D+ E +++ LD I ++NS+G LTL+SLA  F +L+
Sbjct: 264 KETVVSLQMEKEKLQKEAAHQKTQLDNTEQIVSVLDIISEENSVGKLTLDSLAKYFGDLR 323

Query: 107 CKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLD-------- 158
            + +  Y + +LS +A S A PL IR FQGWDPLQNP + LE++S W+ +L         
Sbjct: 324 RRFAEDYKLCNLSCIACSFALPLLIRVFQGWDPLQNPLHGLEVMSSWKNLLQGGDDIFDL 383

Query: 159 SDHGYVYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIV 218
           SD G  Y  QLV + +LPAVR S I+ W A+DPEPML+FL+ W+ LLP S+L T+LD IV
Sbjct: 384 SDVGSPY-TQLVMEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLQTMLDNIV 442

Query: 219 MPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASA 278
           +PK+S  VD WDPR ET  IH WVH WLP LG+K + L+  I  KLG  L AWHPSD SA
Sbjct: 443 LPKLSSAVDVWDPRRETVPIHVWVHPWLPLLGQKLESLYWKICDKLGNALQAWHPSDGSA 502

Query: 279 YILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIP-- 332
           Y +LSPWK V     WE+LM R I+PKL   +QE ++NPA+Q L QFHWVMSWAS IP  
Sbjct: 503 YTILSPWKTVFDSTSWERLMVRSIIPKLMNVLQEFQVNPASQNLDQFHWVMSWASVIPIH 562

Query: 333 -----------------------SSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSIG 369
                                  S PN FEE+ +WY GWK LLPQEL+ANE IR QL+IG
Sbjct: 563 RMVELLELHFFPKWQQVLYHWLCSGPN-FEEVTQWYLGWKGLLPQELLANEQIRYQLNIG 621

Query: 370 VDMIGKAVDGVKI 382
           +DM+ +AV+G+++
Sbjct: 622 LDMMNQAVEGMEV 634

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15220011|ref|NP_173150.1| tuftelin-interacting protein 11 [Arabidopsis thaliana] gi|5734758|gb|AAD50023.1|AC007651_18 Similar to tuftelin-interacting protein [Arabidopsis thaliana] gi|332191416|gb|AEE29537.1| tuftelin-interacting protein 11 [Arabidopsis thaliana]

 Score =  355 bits (910), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 180/382 (47%), Positives = 247/382 (64%), Gaps = 36/382 (9%)

Query: 44  RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFS 103
           R ++E+A  LQ+ K+        +K+  ++ E + + + +I+ +N+ G LTL+SLA  F 
Sbjct: 369 RNERESALSLQQEKEMLINEEEKQKRHLENMEYIADEISRIELENTSGNLTLDSLAIRFE 428

Query: 104 NLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLD--SDH 161
           +L+      Y +  LS +A SLA PLFIR FQGWDPL +  + L+ +S WR++L+   DH
Sbjct: 429 DLQTSYPDDYKLCSLSTIACSLALPLFIRMFQGWDPLSDAVHGLKAISSWRKLLEVEEDH 488

Query: 162 GY----VYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTI 217
                   Y+QLVS+ +LPAVR + I+ W+ +DPEPML+FL+ W+ LLP S+L TILDT+
Sbjct: 489 NIWVVSTPYSQLVSEVVLPAVRIAGINTWEPRDPEPMLRFLETWETLLPSSVLQTILDTV 548

Query: 218 VMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDAS 277
           V+PK+S  V+ WDPR E  +IH WVH WLP LG+K + L+++I +KL  VLDAWHPSD+S
Sbjct: 549 VLPKLSTAVEYWDPRRELVAIHVWVHPWLPILGQKLEFLYQIIQMKLSNVLDAWHPSDSS 608

Query: 278 AYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIP- 332
           AY +LSPWK V     WEQLM RYIVPKLQ+ +QE ++NPANQ L +F WVM WASA+P 
Sbjct: 609 AYTILSPWKTVFDTTSWEQLMRRYIVPKLQLALQEFQVNPANQNLERFDWVMKWASAVPI 668

Query: 333 ------------------------SSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSI 368
                                   + P  FEEI+ WY GWK+L PQEL ANE IR QL  
Sbjct: 669 HLMADMMERFFFPKWLDVLYHWLRAKPR-FEEIQGWYYGWKELFPQELTANERIRIQLKR 727

Query: 369 GVDMIGKAVDGVKIDPPAHSLN 390
           G+DM+ +AV+GV++  P    N
Sbjct: 728 GLDMLMEAVEGVEVSQPRAKAN 749

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566080|ref|XP_002524028.1| tuftelin interacting protein, putative [Ricinus communis] gi|223536755|gb|EEF38396.1| tuftelin interacting protein, putative [Ricinus communis]

 Score =  351 bits (900), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 185/412 (44%), Positives = 257/412 (62%), Gaps = 38/412 (9%)

Query: 44  RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFS 103
           R ++ETA  L+  K+K +   A +K++ D+ E ++N L  I+++NS GTLTL+ LA  F+
Sbjct: 383 RNERETAISLKNEKEKLEMEAARQKKQLDNMEEIMNMLSYIEEQNSSGTLTLDLLAKCFT 442

Query: 104 NLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDHGY 163
           +L+ K +  Y + +LS +A S A PLFIR FQGWDPL+NP + LEL+ +W+ VL  D   
Sbjct: 443 DLRRKFADDYKLCNLSCIACSFALPLFIRVFQGWDPLRNPLHGLELIELWKNVLQGDESN 502

Query: 164 ------VYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTI 217
                   Y QLVS+ + PAVR S I+ W+ +DPEPML+FL+ W+  LP S++ +I D +
Sbjct: 503 DIWDVGTPYTQLVSEVVFPAVRISGINTWEPRDPEPMLRFLESWEKSLPASVVQSISDNV 562

Query: 218 VMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDAS 277
           V+PK+S  VDSW+P+ ET  IH WVH WLP LG+K + L+  I +KL  VLD W P+D S
Sbjct: 563 VLPKLSSAVDSWNPQLETVPIHVWVHPWLPLLGQKLEYLYEKIRMKLSMVLDRWEPNDTS 622

Query: 278 AYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIP- 332
           AY +LSPWK V     WE+LM R+I+PKL+V +Q  EINP +QKL QF+WVMSWASAIP 
Sbjct: 623 AYTILSPWKTVFDSASWERLMCRFIIPKLEVALQGFEINPVDQKLDQFYWVMSWASAIPI 682

Query: 333 ------------------------SSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSI 368
                                   SSPN  +E+ +WY GWK L P EL A+E IR Q + 
Sbjct: 683 HLMVDMMERFFFEKWLLVLYHWLCSSPN-LQEVHQWYIGWKGLFPPELQAHEHIRYQFTR 741

Query: 369 GVDMIGKAVDGVKIDPPAHSLNYSLPGMRSLKPWLFEAPQTRRAPAQNYQAF 420
           G+ MI KA++G+++  P   L  +L  +R+ +   FEA Q     A+   A 
Sbjct: 742 GLQMIDKAIEGMEVVQPG--LRDNLTYLRAQEQRQFEAQQRAAVHAKQQSAM 791

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	422
TAIR|locus:2020332	849	STIPL1 "SPLICEOSOMAL TIMEKEEPE	0.729	0.362	0.487	1.2e-79
TAIR|locus:2053839	752	AT2G42330 [Arabidopsis thalian	0.725	0.406	0.479	1.7e-75
MGI|MGI:1930075	838	Tfip11 "tuftelin interacting p	0.729	0.367	0.322	4.6e-46
UNIPROTKB|Q0IIX9	825	tfip11 "Tuftelin-interacting p	0.729	0.373	0.312	5.4e-46
RGD|1311449	837	Tfip11 "tuftelin interacting p	0.729	0.367	0.319	1.6e-45
UNIPROTKB|Q66J74	824	tfip11 "Tuftelin-interacting p	0.729	0.373	0.310	1.1e-44
UNIPROTKB|Q06AK6	836	TFIP11 "Tuftelin-interacting p	0.729	0.368	0.312	1.5e-44
UNIPROTKB|Q5R5K8	837	TFIP11 "Tuftelin-interacting p	0.729	0.367	0.309	2e-44
UNIPROTKB|Q9UBB9	837	TFIP11 "Tuftelin-interacting p	0.729	0.367	0.306	3.3e-44
UNIPROTKB|A1XD93	837	TFIP11 "Tuftelin-interacting p	0.729	0.367	0.306	3.3e-44

TAIR|locus:2020332 STIPL1 "SPLICEOSOMAL TIMEKEEPER LOCUS1" [Arabidopsis thaliana (taxid:3702)]

 Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
 Identities = 156/320 (48%), Positives = 218/320 (68%)

Query:    44 RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFS 103
             R ++E+A  LQ+ K+        +K+  ++ E + + + +I+ +N+ G LTL+SLA  F 
Sbjct:   369 RNERESALSLQQEKEMLINEEEKQKRHLENMEYIADEISRIELENTSGNLTLDSLAIRFE 428

Query:   104 NLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLD--SDH 161
             +L+      Y +  LS +A SLA PLFIR FQGWDPL +  + L+ +S WR++L+   DH
Sbjct:   429 DLQTSYPDDYKLCSLSTIACSLALPLFIRMFQGWDPLSDAVHGLKAISSWRKLLEVEEDH 488

Query:   162 G-YVY---YAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTI 217
               +V    Y+QLVS+ +LPAVR + I+ W+ +DPEPML+FL+ W+ LLP S+L TILDT+
Sbjct:   489 NIWVVSTPYSQLVSEVVLPAVRIAGINTWEPRDPEPMLRFLETWETLLPSSVLQTILDTV 548

Query:   218 VMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDAS 277
             V+PK+S  V+ WDPR E  +IH WVH WLP LG+K + L+++I +KL  VLDAWHPSD+S
Sbjct:   549 VLPKLSTAVEYWDPRRELVAIHVWVHPWLPILGQKLEFLYQIIQMKLSNVLDAWHPSDSS 608

Query:   278 AYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPS 333
             AY +LSPWK V     WEQLM RYIVPKLQ+ +QE ++NPANQ L +F WVM WASA+P 
Sbjct:   609 AYTILSPWKTVFDTTSWEQLMRRYIVPKLQLALQEFQVNPANQNLERFDWVMKWASAVPI 668

Query:   334 S-PNDFEEIRKWYKGWKDLL 352
                 D  E R ++  W D+L
Sbjct:   669 HLMADMME-RFFFPKWLDVL 687

GO:0003676 "nucleic acid binding" evidence=IEA;ISS

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0000398 "mRNA splicing, via spliceosome" evidence=IMP

GO:0031981 "nuclear lumen" evidence=IDA

GO:0042752 "regulation of circadian rhythm" evidence=IMP

TAIR|locus:2053839 AT2G42330 [Arabidopsis thaliana (taxid:3702)]

 Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
 Identities = 153/319 (47%), Positives = 212/319 (66%)

Query:    44 RIKKETAFCLQRNKDKFDKMRAAEKQK--FDDAETVLNTLDQIQKKNSLGTLTLESLAND 101
             R +K  A  LQ+ K+KF KM   +KQK  FD+   V   +D+I+ + + G LTL+SLAN 
Sbjct:   272 RNEKGLALSLQQEKEKF-KM-GVKKQKTLFDNLGYVAEEIDRIEVEIASGNLTLDSLANR 329

Query:   102 FSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLD-SD 160
             F +L+      Y   +LS +A SLA PLFIR FQGWDPL +  + +E +S W+ +L+  D
Sbjct:   330 FKDLRSSYPDDYKCCNLSCIASSLALPLFIRMFQGWDPLSDAEHGIEAISSWKMLLEVED 389

Query:   161 HGYVY--YAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIV 218
             +  +   Y+QLVS+ ILPAVR S I+ W+ +DPEPML+ L+ W+ +LP  +  TIL T+V
Sbjct:   390 NQSISTPYSQLVSEVILPAVRVSGINTWEPRDPEPMLRLLETWEKMLPSLIFETILTTVV 449

Query:   219 MPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASA 278
             +PK+S  ++SW+PR ET  IH WVH WLP LG+K +  +++I +K G +LDAWHPSD S 
Sbjct:   450 LPKLSIAIESWEPRLETVPIHFWVHPWLPVLGQKLESAYQIIRMKFGNLLDAWHPSDVSV 509

Query:   279 YILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSS 334
             + +LSPWK V     WEQLM RYIVPKLQV +QE +INPA+Q L +F+ VM W S++P  
Sbjct:   510 HTILSPWKTVFDAASWEQLMRRYIVPKLQVALQEFQINPADQNLDEFNLVMGWVSSVPIH 569

Query:   335 -PNDFEEIRKWYKGWKDLL 352
                D  E R ++  W D+L
Sbjct:   570 LMTDLME-RFFFPKWLDVL 587

GO:0003676 "nucleic acid binding" evidence=IEA;ISS

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

MGI|MGI:1930075 Tfip11 "tuftelin interacting protein 11" [Mus musculus (taxid:10090)]

 Score = 490 (177.5 bits), Expect = 4.6e-46, P = 4.6e-46
 Identities = 105/326 (32%), Positives = 177/326 (54%)

Query:    26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
             L +L   T+ ++  +D   + +++    L    +K  ++ A E++   +   VL  +++ 
Sbjct:   325 LQLLIERTEQEIIQSDRQLQYERDMVVSLSHELEKTAEVLAHEERVISNLSKVLALVEEC 384

Query:    85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
             +++   +    LTL+  A  F  L+ K    Y +   + +A ++ +PL    F+ W PL+
Sbjct:   385 ERRMQPHGADPLTLDECARIFETLQDKYYEEYRLADRADLAVAIVYPLVKDYFKDWHPLE 444

Query:   142 NPSYQLELVSMWRQVLDSDHGYVYYAQ-LVSQAI--------LPAVRASSISNWDAKDPE 192
             + SY  +++S W+ +L++D    + +Q L S A         +P VR + ++ W  ++ E
Sbjct:   445 DGSYGTQIISKWKSLLENDQLLSHSSQDLSSDAFHRLMWEVWMPFVR-NVVAQWQPRNCE 503

Query:   193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
             PM+ FLD W  ++P  +L+ ILD ++ PK+   VD+W+P ++T  IH W+H WLP +  +
Sbjct:   504 PMVDFLDSWAHIIPVWILDNILDQLIFPKLQKEVDNWNPLTDTVPIHSWIHPWLPLMQAR 563

Query:   253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
              + L+  +  KL   L  WHPSDASA ++L PWK VL    WE  M R IVPKL + + E
Sbjct:   564 LEPLYSPVRSKLSSALQKWHPSDASAKLILQPWKEVLTPGSWEAFMLRNIVPKLGMCLGE 623

Query:   309 LEINPANQKLYQFHWVMSWASAIPSS 334
             L INP  Q +  F+WVM W   I  S
Sbjct:   624 LVINPHQQHMDAFYWVMDWEGMISVS 649

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005578 "proteinaceous extracellular matrix" evidence=IDA

GO:0005622 "intracellular" evidence=NAS

GO:0005634 "nucleus" evidence=ISA

GO:0005681 "spliceosomal complex" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0030154 "cell differentiation" evidence=NAS

GO:0030198 "extracellular matrix organization" evidence=NAS

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0071013 "catalytic step 2 spliceosome" evidence=ISO

UNIPROTKB|Q0IIX9 tfip11 "Tuftelin-interacting protein 11" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 489 (177.2 bits), Expect = 5.4e-46, P = 5.4e-46
 Identities = 102/326 (31%), Positives = 175/326 (53%)

Query:    26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
             L +L + T+ ++  ND   + +++    L    +K  ++   E++   +   VL T+++ 
Sbjct:   313 LQLLIDMTEQEIIQNDRQLQYEQDMVVNLTHELEKLSEVLEREEKAIQNLSKVLETVEEC 372

Query:    85 QKKNSL---GTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
             +++        LTLE  A  F  L+ K    Y +   + ++ ++ +PL    F+ W+PL+
Sbjct:   373 ERRIQPMCDNPLTLEECARIFEMLQDKYYEEYKMSEKADLSVAIVYPLMKDYFKDWNPLR 432

Query:   142 NPSYQLELVSMWRQVLDSDHGYVY---------YAQLVSQAILPAVRASSISNWDAKDPE 192
             +P+Y  +++S W+ +L+  H   +         Y +L+ +  +P +R S I+ W  ++  
Sbjct:   433 DPTYGTDVMSKWKNLLEEGHLLSHSAHDASMDPYHRLLWETWVPLLR-SIIAQWQPRNCA 491

Query:   193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
             PM+ FLDCW  LLP  +L+ ILD ++ PK+   V++W+P ++T  IH W+H WLP +  +
Sbjct:   492 PMVDFLDCWVHLLPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQSR 551

Query:   253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
              + LF  I  KL   L  WHPSD+SA ++L PWK V     WE  M + I+PKL + + E
Sbjct:   552 LEPLFSPIRNKLANALQKWHPSDSSAKLILQPWKEVFTPGSWEAFMVKNILPKLGMCLSE 611

Query:   309 LEINPANQKLYQFHWVMSWASAIPSS 334
               INP  Q +  FHWV  W   +  S
Sbjct:   612 FVINPHQQHMEVFHWVTDWEGMVSLS 637

GO:0005681 "spliceosomal complex" evidence=ISS

RGD|1311449 Tfip11 "tuftelin interacting protein 11" [Rattus norvegicus (taxid:10116)]

 Score = 485 (175.8 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 104/326 (31%), Positives = 176/326 (53%)

Query:    26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
             L +L   T+ ++  +D   + +++    L    +K  ++ A E++   +   VL  +++ 
Sbjct:   324 LQLLIERTEQEIIQSDRQLQYERDMVVSLSHELEKTAEVLAHEERVISNLSKVLALVEEC 383

Query:    85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
             + +   +    LTL+  A  F  L+ K    Y +   + +A ++ +PL    F+ W PL+
Sbjct:   384 EHRMQPHGADPLTLDECARIFETLQDKYYEEYRLADRADLAVAIVYPLVKDYFKDWHPLE 443

Query:   142 NPSYQLELVSMWRQVLDSDHGYVYYAQ-LVSQAI--------LPAVRASSISNWDAKDPE 192
             + +Y  +++S W+ +L++D    + +Q L S A         +P VR + ++ W  ++ E
Sbjct:   444 DSNYGTQIISKWKSLLENDQLLSHSSQDLSSDAFHRLMWEVWMPFVR-NVVAQWQPRNCE 502

Query:   193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
             PM+ FLD W  ++P  +L+ ILD ++ PK+   VD+W+P ++T  IH W+H WLP +  +
Sbjct:   503 PMVDFLDSWAHIIPVWILDNILDQLIFPKLQKEVDNWNPLTDTVPIHSWIHPWLPLMQAR 562

Query:   253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
              + L+  +  KL   L  WHPSDASA ++L PWK VL    WE  M R IVPKL + + E
Sbjct:   563 LEPLYSPVRSKLSSALQKWHPSDASAKLILQPWKEVLTPGSWEAFMLRNIVPKLGMCLGE 622

Query:   309 LEINPANQKLYQFHWVMSWASAIPSS 334
             L INP  Q +  F+WVM W   I  S
Sbjct:   623 LVINPHQQHMDAFYWVMDWEGMISVS 648

GO:0003677 "DNA binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA;ISO

GO:0005681 "spliceosomal complex" evidence=ISO;ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA;ISO

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO

UNIPROTKB|Q66J74 tfip11 "Tuftelin-interacting protein 11" [Xenopus laevis (taxid:8355)]

 Score = 477 (173.0 bits), Expect = 1.1e-44, P = 1.1e-44
 Identities = 101/325 (31%), Positives = 172/325 (52%)

Query:    26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
             L +L + T+ ++  ND   + +++    L    +K  ++   E +  ++   VL T+++ 
Sbjct:   313 LQLLIDMTEQEIIQNDRQLQYEQDMVVNLTHELEKLSEVLEREDKAIENLSKVLETVEEC 372

Query:    85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
             +++        LTLE  A  F  L+ K    Y +   + ++ ++ +PL    F+ W+PL+
Sbjct:   373 ERRIQPTCDNPLTLEECARIFEMLQDKYYEEYKMSEKADLSVAIVYPLMKDYFKDWNPLR 432

Query:   142 NPSYQLELVSMWRQVLDSDH--------GYVYYAQLVSQAILPAVRASSISNWDAKDPEP 193
             +P+Y  +++S W+ +L+  H            Y +L+ +  +P +R + I+ W  ++  P
Sbjct:   433 DPNYGTDVMSKWKNLLEEGHLSHSAHDAAMDPYHRLLWEMWVPFLR-NIIAQWQPRNCAP 491

Query:   194 MLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQ 253
             M  FLD W  LLP  +L+ ILD ++ PK+   V++W+P ++T  IH W+H WLP +  + 
Sbjct:   492 MADFLDSWVHLLPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPMMQSRL 551

Query:   254 KGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQEL 309
             + LF  I  KL   L  WHPSD+SA ++L PWK V     WE  M + IVPKL + + E 
Sbjct:   552 EPLFSPIRNKLSNALQKWHPSDSSAKLILQPWKEVFTPGSWEAFMVKNIVPKLGMCLSEF 611

Query:   310 EINPANQKLYQFHWVMSWASAIPSS 334
              INP  Q +  FHWV  W   +  S
Sbjct:   612 VINPHQQHMEVFHWVTDWEGMVALS 636

GO:0005681 "spliceosomal complex" evidence=ISS

UNIPROTKB|Q06AK6 TFIP11 "Tuftelin-interacting protein 11" [Sus scrofa (taxid:9823)]

 Score = 476 (172.6 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 102/326 (31%), Positives = 177/326 (54%)

Query:    26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
             L +L   T+ ++  ND   + +++    L    +K  ++   E++   +   VL  +++ 
Sbjct:   323 LQLLIELTEQEIIQNDRQLQYERDMVVNLSHELEKMAEVLEHEERVISNLSKVLEMVEEC 382

Query:    85 QKKNSLGT---LTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
             +++   G    LTL+  A  F  L+ K    Y +     +A ++ +PL    F+ WDPL+
Sbjct:   383 ERRLQPGCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKDYFKEWDPLK 442

Query:   142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
             + +Y  E++S W+ +L++D    HG        + +L+ +  +P VR + ++ W  ++ +
Sbjct:   443 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 501

Query:   193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
             PM+ FLD W  ++P  +L+ ILD +V PK+   V++W+P ++T  IH W+H WLP +  +
Sbjct:   502 PMVDFLDSWVHIIPVWILDNILDQLVFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 561

Query:   253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
              + L+  I  KL   L  WHPSD+SA ++L PWK+V     WE  M + IVPKL + + E
Sbjct:   562 LEPLYSPIRSKLASALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 621

Query:   309 LEINPANQKLYQFHWVMSWASAIPSS 334
             L INP  Q +  F+WV+ W   I  S
Sbjct:   622 LVINPHQQHMDAFYWVIDWEGMISVS 647

GO:0005681 "spliceosomal complex" evidence=ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|Q5R5K8 TFIP11 "Tuftelin-interacting protein 11" [Pongo abelii (taxid:9601)]

 Score = 475 (172.3 bits), Expect = 2.0e-44, P = 2.0e-44
 Identities = 101/326 (30%), Positives = 178/326 (54%)

Query:    26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
             L +L + T+ ++  ND   + +++    L    +K  ++   E++   +   VL  +++ 
Sbjct:   324 LQLLIDLTEQEIIQNDRQLQYERDMVVNLFHELEKMTEVLDHEERVIFNLSKVLEMVEEC 383

Query:    85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
             +++   N    LTL+  A  F  L+ K    Y +     +A ++ +PL    F+ WDPL+
Sbjct:   384 ERRMQPNCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLK 443

Query:   142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
             + +Y  E++S W+ +L++D    HG        + +L+ +  +P VR + ++ W  ++ +
Sbjct:   444 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 502

Query:   193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
             PM+ FLD W  ++P  +L+ ILD ++ PK+   V++W+P ++T  IH W+H WLP +  +
Sbjct:   503 PMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 562

Query:   253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
              + L+  I  KL   L  WHPSD+SA ++L PWK+V     WE  M + IVPKL + + E
Sbjct:   563 LEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622

Query:   309 LEINPANQKLYQFHWVMSWASAIPSS 334
             L INP  Q +  F+WV+ W   I  S
Sbjct:   623 LVINPHQQHMDAFYWVIDWEGMISVS 648

GO:0005681 "spliceosomal complex" evidence=ISS

UNIPROTKB|Q9UBB9 TFIP11 "Tuftelin-interacting protein 11" [Homo sapiens (taxid:9606)]

 Score = 473 (171.6 bits), Expect = 3.3e-44, P = 3.3e-44
 Identities = 100/326 (30%), Positives = 178/326 (54%)

Query:    26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
             L +L + T+ ++  ND   + +++    L    +K  ++   E++   +   VL  +++ 
Sbjct:   324 LQLLIDLTEQEIIQNDRQLQYERDMVVNLFHELEKMTEVLDHEERVISNLSKVLEMVEEC 383

Query:    85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
             +++   +    LTL+  A  F  L+ K    Y +     +A ++ +PL    F+ WDPL+
Sbjct:   384 ERRMQPDCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLK 443

Query:   142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
             + +Y  E++S W+ +L++D    HG        + +L+ +  +P VR + ++ W  ++ +
Sbjct:   444 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 502

Query:   193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
             PM+ FLD W  ++P  +L+ ILD ++ PK+   V++W+P ++T  IH W+H WLP +  +
Sbjct:   503 PMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 562

Query:   253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
              + L+  I  KL   L  WHPSD+SA ++L PWK+V     WE  M + IVPKL + + E
Sbjct:   563 LEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622

Query:   309 LEINPANQKLYQFHWVMSWASAIPSS 334
             L INP  Q +  F+WV+ W   I  S
Sbjct:   623 LVINPHQQHMDAFYWVIDWEGMISVS 648

GO:0003677 "DNA binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005681 "spliceosomal complex" evidence=IDA

GO:0006396 "RNA processing" evidence=IC

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

GO:0016607 "nuclear speck" evidence=IDA

UNIPROTKB|A1XD93 TFIP11 "Tuftelin-interacting protein 11" [Pan troglodytes (taxid:9598)]

 Score = 473 (171.6 bits), Expect = 3.3e-44, P = 3.3e-44
 Identities = 100/326 (30%), Positives = 178/326 (54%)

Query:    26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
             L +L + T+ ++  ND   + +++    L    +K  ++   E++   +   VL  +++ 
Sbjct:   324 LQLLIDLTEQEIIQNDRQLQYERDMVVNLFHELEKMTEVLDHEERVISNLSKVLEMVEEC 383

Query:    85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
             +++   +    LTL+  A  F  L+ K    Y +     +A ++ +PL    F+ WDPL+
Sbjct:   384 ERRMQPDCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLR 443

Query:   142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
             + +Y  E++S W+ +L++D    HG        + +L+ +  +P VR + ++ W  ++ +
Sbjct:   444 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 502

Query:   193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
             PM+ FLD W  ++P  +L+ ILD ++ PK+   V++W+P ++T  IH W+H WLP +  +
Sbjct:   503 PMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 562

Query:   253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
              + L+  I  KL   L  WHPSD+SA ++L PWK+V     WE  M + IVPKL + + E
Sbjct:   563 LEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622

Query:   309 LEINPANQKLYQFHWVMSWASAIPSS 334
             L INP  Q +  F+WV+ W   I  S
Sbjct:   623 LVINPHQQHMDAFYWVIDWEGMISVS 648

GO:0005681 "spliceosomal complex" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	422
pfam07842	275	pfam07842, GCFC, GC-rich sequence DNA-binding fact	2e-62

>gnl|CDD|219603 pfam07842, GCFC, GC-rich sequence DNA-binding factor-like protein

 Score =  202 bits (515), Expect = 2e-62
 Identities = 97/258 (37%), Positives = 144/258 (55%), Gaps = 19/258 (7%)

Query: 95  LESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWR 154
           L+ +A  F +L+ K    Y   +LS +A +L  PL       WDPL++P+Y ++++  W+
Sbjct: 1   LDEVAEIFEDLQRKYPEEYKEAYLSLLAPALVAPLLRLELLEWDPLEDPTYGVDILKRWK 60

Query: 155 QVLDSDHGYVY--------YAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLP 206
            +L+ D             Y  ++ +  LP  R+S++S WD +DP+PML  L+ W  LLP
Sbjct: 61  ALLELDSSDDTGGAESMDPYETMLWEGWLPRYRSSALSTWDPRDPDPMLNLLEAWAPLLP 120

Query: 207 YSLLNTILDTIVMPKMSDVVDSWDPRSET-----YSIHDWVHQWLPWLG-RKQKGLFRMI 260
             +L+ IL+ +V+PK++  V+ WDP S+T       IH WV  WLP LG  + + L+  I
Sbjct: 121 SFILDNILEQLVLPKLTAAVEEWDPLSDTVTRHLVPIHSWVFPWLPLLGEARLEPLYPAI 180

Query: 261 LIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQ 316
             KL + LDAWHPSD SA   L PWK+V     W+ L+ R+I+PKL   +QE EINP  Q
Sbjct: 181 RRKLRQALDAWHPSD-SALAGLKPWKDVFSPAEWDPLLLRHILPKLARFLQEFEINPRQQ 239

Query: 317 KLYQFHWVMSWASAIPSS 334
            L     V+ W   +  S
Sbjct: 240 ALDLLRNVLKWKGLLSPS 257

Sequences found in this family are similar to a region of a human GC-rich sequence DNA-binding factor homolog. This is thought to be a protein involved in transcriptional regulation due to partial homologies to a transcription repressor and histone-interacting protein. This family also contains tuftelin interacting protein 11 which has been identified as both a nuclear and cytoplasmic protein, and has been implicated in the secretory pathway. Sip1, a septin interacting protein is also a member of this family. Length = 275

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	422
KOG2184	767	consensus Tuftelin-interacting protein TIP39, cont	100.0
PF07842	276	GCFC: GC-rich sequence DNA-binding factor-like pro	100.0
KOG2184	767	consensus Tuftelin-interacting protein TIP39, cont	99.68
PF07842	276	GCFC: GC-rich sequence DNA-binding factor-like pro	99.67
PF12325	120	TMF_TATA_bd: TATA element modulatory factor 1 TATA	83.43

>KOG2184 consensus Tuftelin-interacting protein TIP39, contains G-patch domain [RNA processing and modification]

Probab=100.00  E-value=6e-71  Score=586.38  Aligned_cols=376  Identities=37%  Similarity=0.709  Sum_probs=354.0

Q ss_pred             chhhHhhchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHhhHH
Q 035814           32 GTKAQLAGNDGSRIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFSNLKCKVSH  111 (422)
Q Consensus        32 ~~~~i~~~d~~~r~e~d~~~~L~~e~~~l~~~~~~~~~~i~~l~~i~~~i~~~~~~~~~~~~tl~~l~~~f~~L~~~y~~  111 (422)
                      -+++|+++|+++|.++|++.+|+++++.++..++.++.+..++..+.+.|+.++...++..+||++|...|+.|+.+||+
T Consensus       279 ~E~~i~~~~~~lr~e~~~~~~le~~~e~~~~~~~~~~~~~~~l~~~~e~v~~~e~~~~~~~~tld~~~~~fe~L~~eY~~  358 (767)
T KOG2184|consen  279 QESQIRRSDRQLRIERDQALNLEKEIEKLEEELDLEKTHEQSLRKVEESVDEAELDVSSKRLTLDELAILFELLRMEYPE  358 (767)
T ss_pred             hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhhhccCCccccHHHHHHHHHHhhhhccc
Confidence            46789999999999999999999999999999999999999999999999999987777779999999999999999999


Q ss_pred             HHhhcChhHHHHHHhhhHHHHhhcCCCCCCCchhhHHHHHHHHHhccCCc------cccHHHHHHHHhhHHHHHHhhccc
Q 035814          112 SYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDH------GYVYYAQLVSQAILPAVRASSISN  185 (422)
Q Consensus       112 ey~~~~L~~lav~~v~Pllr~~~~~WdPL~~P~~~l~~l~~wk~lL~~~~------~~~~y~~Li~~~~lP~lr~ai~~~  185 (422)
                      +|..|+|.++|++++.|++.+.|..|+|+.+|+++++.+..||.+|....      ..++|++++|..|||++|.+..+.
T Consensus       359 ~~~~~~l~~~a~~i~~pL~~~~~~~Wdpl~d~~~g~e~i~~wk~lL~~~~~~~~~~~~~~~~~li~e~~~p~vr~~~l~~  438 (767)
T KOG2184|consen  359 EYTLKSLSSIAVSIVLPLLKRYLKFWDPLEDPYSGLESISKWKALLEQSDDLRKRDEIDPYSSLIWEGVMPKVRKAELAT  438 (767)
T ss_pred             cccccccccchhhhhhHHHHHHhhccCcccCccchhHHHHHHHhhhhhhccchhhccccccceeeeeeecHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999997652      256999999999999999944445


Q ss_pred             ccCCCcchHHHHHHhhhhhchhhHHHHhhhhhhHHHHHHhhhccCCCCCCCCchhHHhcChhhhhcchHHHHHHHHHHHH
Q 035814          186 WDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLG  265 (422)
Q Consensus       186 Wdp~d~~p~l~ll~~W~plLP~~i~dnILeqlIlPKL~~aV~~W~P~~d~~pih~wl~PWlp~Lg~rl~~L~~~Ir~KL~  265 (422)
                      |.|+|+.||++|+++|.++||.+|.|||++++|+|||.++|++|+|++|.+|+|.|+|||+++++.|++.+|+.||.||+
T Consensus       439 w~~~d~~~m~~lle~W~~~lp~~VldnIl~~~v~pkl~~~v~~W~p~~d~~~i~swi~pwl~il~~r~~~l~~~i~~Kls  518 (767)
T KOG2184|consen  439 WEPRDMLPMLSLLEAWVPLLPSWVLDNILDQLVLPKLSAAVSQWDPLTDTVPIHSWIHPWLPILGQRLESLYPSIRSKLS  518 (767)
T ss_pred             cCccchhHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhcccccceeeecchHHHhhhHHHhhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcccccCCCChhhhhhhhhhHHHH----HHHHHHhhhhHHHHHHHHhhhcCCCCcchhHHHHhhhccccccc--------
Q 035814          266 EVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPS--------  333 (422)
Q Consensus       266 ~aL~~W~~~d~sa~~~L~pWk~Vf----~~~~L~k~IlPKL~~~L~~~~InP~~Q~le~~~~vl~W~~~i~~--------  333 (422)
                      .+|..|+++|++++.+|+|||.||    |++|+.++|+|||+.+|.++.|||.+|+|+.|.+|+.|++++++        
T Consensus       519 ~~l~~W~p~d~sa~~~l~pWK~~f~~~~~~~~~~~~ivpkl~~~l~e~~inp~~q~l~~~~~v~~w~~~i~~~~~~~l~~  598 (767)
T KOG2184|consen  519 IALDAWHPSDRSAIAILSPWKTVFDAASWKEFMRRYIVPKLQLALDELQINPMNQDLERFTWVMEWKGLIDPHLMAQLLE  598 (767)
T ss_pred             HHhhcCCCcccCchhhhccchhccchhhHHHHHhhcccccHHHHhhhhccCccccchhhhhhhhhhhcccCHHHHHHHHH
Confidence            999999999999999999999999    99999999999999999999999999999999999999999998        


Q ss_pred             ----------------CCCChHHHHHHHHHHHhhchHHhhcchhHHHHHHHHHHHHHHhhcCCCCCCCCCcCCCCCCCcc
Q 035814          334 ----------------SPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVDGVKIDPPAHSLNYSLPGMR  397 (422)
Q Consensus       334 ----------------~~pn~~EV~~WY~~WK~~fp~~l~~~~~I~~~f~~aL~mmn~a~~~~~i~~p~~~~~~~~~~~~  397 (422)
                                      +.|||+||..||.|||++||..+++++.|+++|++||||||+|+++..+++|.++++++.  .+
T Consensus       599 ~hffpkwl~~l~~WL~n~p~~~Ei~~wy~gwK~~~~~~ll~~~~v~~~~k~~ld~~~r~~~~~~l~~p~a~d~~~~--~~  676 (767)
T KOG2184|consen  599 RHFFPKWLNVLYHWLSNSPDYDEISRWYTGWKSMFPQELLANPYVKDKFKRGLDMMNRAVERLELGQPFAIDNIQP--SP  676 (767)
T ss_pred             HhhhHHHHHHHHHHhcCCCchHHHHHHHHhHHHhccHhhhcCchhhhhhhhhHHHHHHhhcccccCCCccccccCC--CC
Confidence                            689999999999999999999999999999999999999999999989999999999865  44


Q ss_pred             CCCCCCCCcccc
Q 035814          398 SLKPWLFEAPQT  409 (422)
Q Consensus       398 ~~~~~~~~~~~~  409 (422)
                      +.++....-.+.
T Consensus       677 ~~~~~a~~~~~~  688 (767)
T KOG2184|consen  677 QSPNMAVAKIQL  688 (767)
T ss_pred             CCCCcchhcccC
Confidence            444433333333

>PF07842 GCFC: GC-rich sequence DNA-binding factor-like protein; InterPro: IPR022783 Sequences in this group are similar to a region of a human GC-rich sequence DNA-binding factor homologue (Q9Y5B6 from SWISSPROT)

Probab=100.00  E-value=2.1e-54  Score=424.35  Aligned_cols=238  Identities=39%  Similarity=0.803  Sum_probs=228.0

Q ss_pred             HHHHHHHHHHHHHhhHHHHhhcChhHHHHHHhhhHHHHhhcCCCCCCCchhhHHHHHHHHHhccCC---------ccccH
Q 035814           95 LESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSD---------HGYVY  165 (422)
Q Consensus        95 l~~l~~~f~~L~~~y~~ey~~~~L~~lav~~v~Pllr~~~~~WdPL~~P~~~l~~l~~wk~lL~~~---------~~~~~  165 (422)
                      |+++...|++++.+||+||+.|+|+.+++++++|++|..+.+||||++|+++++.+.+|+++|..+         .+.++
T Consensus         1 l~~i~~~fe~l~~~~~~ey~~~~l~~~~~~~~~P~lr~~l~~W~PL~~p~~~~~~l~~~~~lL~~~~~~~~~~~~~~~~~   80 (276)
T PF07842_consen    1 LEPILSRFEELKEKFPEEYRDAYLSLLAPALIAPLLRLELQNWDPLEDPSYGVDELKRWRSLLENDQDSSSSSSNRNMTP   80 (276)
T ss_pred             ChHHHHHHHHHHHHCHHHHHHcChHHHHHHHHHHHHHHHHhccCCccCcchHHHHHHHHHHHHhhcccccccccccccCc
Confidence            478999999999999999999999999999999999999999999999999999999999999842         12569


Q ss_pred             HHHHHHHhhHHHHHHhhcccccCCCcchHHHHHHhhhhhchhhHHHHhhhhhhHHHHHHhhhccCCCCCCC-----Cchh
Q 035814          166 YAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETY-----SIHD  240 (422)
Q Consensus       166 y~~Li~~~~lP~lr~ai~~~Wdp~d~~p~l~ll~~W~plLP~~i~dnILeqlIlPKL~~aV~~W~P~~d~~-----pih~  240 (422)
                      |++|+|..|+|++|.++.++|++++++++++++++|.++||.++.++|+||+|+|||.++|++|||+++++     |+|.
T Consensus        81 ye~l~w~~~lp~~~~~~~~~w~~~~~~~~~~ll~~W~~~Lp~~~~~~ileqlVlPKL~~~V~~WdP~s~~~t~~~~~~h~  160 (276)
T PF07842_consen   81 YESLIWEIWLPKVRSAIANEWDPRDPDPDLSLLEAWSPLLPPWILDNILEQLVLPKLQAAVEEWDPLSDSQTRNLVPLHS  160 (276)
T ss_pred             HHHhhHHHHHHHHHHhhhcccCCCCCchHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCcccCcccccccchHHH
Confidence            99999999999999887677999999999999999999999999999999999999999999999998887     9999


Q ss_pred             HHhcChhhhh-cchHHHHHHHHHHHHHcccccCCCChhhhhhhhhhHHHH----HHHHHHhhhhHHHHHHHHhhhcCCCC
Q 035814          241 WVHQWLPWLG-RKQKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPAN  315 (422)
Q Consensus       241 wl~PWlp~Lg-~rl~~L~~~Ir~KL~~aL~~W~~~d~sa~~~L~pWk~Vf----~~~~L~k~IlPKL~~~L~~~~InP~~  315 (422)
                      |||||+|++| .+++.|++.||+||+++|++|+++ .+++.+|+|||+||    |++++.+||+|||+.+|++|+|||++
T Consensus       161 wl~pwlp~l~~~~l~~l~~~ir~kl~~~l~~W~~~-~~~~~~l~~Wk~vf~~~~~~~~~~~~i~Pkl~~~l~~~~i~p~~  239 (276)
T PF07842_consen  161 WLFPWLPLLGSERLEPLYPAIRRKLRSALDNWHPS-RSALAMLSPWKDVFIPEEWDKLLLRHILPKLAKFLREFVINPRQ  239 (276)
T ss_pred             HHhccCcccCchhHHHHHHHHHHHHHHHHHccCcc-cchhhhhhHHHHhCCHhhHHHHHHHhhchHHHHHHHhCCCChhh
Confidence            9999999999 799999999999999999999999 77899999999999    99999999999999999999999999


Q ss_pred             cchhHHHHhhhccccccc
Q 035814          316 QKLYQFHWVMSWASAIPS  333 (422)
Q Consensus       316 Q~le~~~~vl~W~~~i~~  333 (422)
                      |+++.|++|+.|++++++
T Consensus       240 q~l~~~~~vl~W~~~l~~  257 (276)
T PF07842_consen  240 QDLKPLRNVLAWKDLLPP  257 (276)
T ss_pred             cCHHHHHHHHHHHhhCCH
Confidence            999999999999999986

This is thought to be a protein involved in transcriptional regulation due to partial homologies to a transcription repressor and histone-interacting protein []. This entry also contains tuftelin interacting protein 11 which has been identified as both a nuclear and cytoplasmic protein, and has been implicated in the secretory pathway. Sip1, a septin interacting protein [] is also a member of this family. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG2184 consensus Tuftelin-interacting protein TIP39, contains G-patch domain [RNA processing and modification]

Probab=99.68  E-value=9.1e-17  Score=172.82  Aligned_cols=201  Identities=22%  Similarity=0.382  Sum_probs=173.6

Q ss_pred             HHHHHHhhhHHHH-hhcCCCCCCCchhhHHHHHHHHHhccCCccccHHHHHHHHhhHHHHHHhhcccccCC-CcchHHHH
Q 035814          120 PVAYSLAFPLFIR-TFQGWDPLQNPSYQLELVSMWRQVLDSDHGYVYYAQLVSQAILPAVRASSISNWDAK-DPEPMLKF  197 (422)
Q Consensus       120 ~lav~~v~Pllr~-~~~~WdPL~~P~~~l~~l~~wk~lL~~~~~~~~y~~Li~~~~lP~lr~ai~~~Wdp~-d~~p~l~l  197 (422)
                      .+....+.|.+|. .+..|.| .++..++..+..|.++|...    ..++++.++|+|++..+|.+ |+|+ |..|++++
T Consensus       421 ~li~e~~~p~vr~~~l~~w~~-~d~~~m~~lle~W~~~lp~~----VldnIl~~~v~pkl~~~v~~-W~p~~d~~~i~sw  494 (767)
T KOG2184|consen  421 SLIWEGVMPKVRKAELATWEP-RDMLPMLSLLEAWVPLLPSW----VLDNILDQLVLPKLSAAVSQ-WDPLTDTVPIHSW  494 (767)
T ss_pred             eeeeeeecHHHHHHHHhccCc-cchhHHHhHHHHHHHhhhHH----HHHHHHHHHHHHHHHHHHhc-cchhhccccccee
Confidence            4566789999999 6778877 47889999999999999887    89999999999999999986 9995 89999999


Q ss_pred             HHhhhhhchhhHHHHhhhhhhHHHHHHhhhccCCCCCCCCchhHHhcChhhhhc-chH-HHHHHHHHHHHHcccccCCCC
Q 035814          198 LDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGR-KQK-GLFRMILIKLGEVLDAWHPSD  275 (422)
Q Consensus       198 l~~W~plLP~~i~dnILeqlIlPKL~~aV~~W~P~~d~~pih~wl~PWlp~Lg~-rl~-~L~~~Ir~KL~~aL~~W~~~d  275 (422)
                      +.+|.++|...+.. ++ +.|++||+.++..|+|.++  +++.-+-||...++. .++ .+-+.|.+||+.+|..-.+++
T Consensus       495 i~pwl~il~~r~~~-l~-~~i~~Kls~~l~~W~p~d~--sa~~~l~pWK~~f~~~~~~~~~~~~ivpkl~~~l~e~~inp  570 (767)
T KOG2184|consen  495 IHPWLPILGQRLES-LY-PSIRSKLSIALDAWHPSDR--SAIAILSPWKTVFDAASWKEFMRRYIVPKLQLALDELQINP  570 (767)
T ss_pred             eecchHHHhhhHHH-hh-hHHHHHHHHHhhcCCCccc--CchhhhccchhccchhhHHHHHhhcccccHHHHhhhhccCc
Confidence            99999999999987 44 8899999999999999843  789999999999997 466 577889999999999987776


Q ss_pred             hhhhhhhhhhHHHH----------HHHHHHhhhhHHHHHHHHhhhcCCCCcchhHHHHhhhccccccc
Q 035814          276 ASAYILLSPWKNVL----------WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPS  333 (422)
Q Consensus       276 ~sa~~~L~pWk~Vf----------~~~~L~k~IlPKL~~~L~~~~InP~~Q~le~~~~vl~W~~~i~~  333 (422)
                        .++.+..|--||          +.+++.+|++||+..+|..+.-|+.+ -.+.-.|+..|+.++|.
T Consensus       571 --~~q~l~~~~~v~~w~~~i~~~~~~~l~~~hffpkwl~~l~~WL~n~p~-~~Ei~~wy~gwK~~~~~  635 (767)
T KOG2184|consen  571 --MNQDLERFTWVMEWKGLIDPHLMAQLLERHFFPKWLNVLYHWLSNSPD-YDEISRWYTGWKSMFPQ  635 (767)
T ss_pred             --cccchhhhhhhhhhhcccCHHHHHHHHHHhhhHHHHHHHHHHhcCCCc-hHHHHHHHHhHHHhccH
Confidence              345566555554          88999999999999999998888765 34455999999999998

>PF07842 GCFC: GC-rich sequence DNA-binding factor-like protein; InterPro: IPR022783 Sequences in this group are similar to a region of a human GC-rich sequence DNA-binding factor homologue (Q9Y5B6 from SWISSPROT)

Probab=99.67  E-value=5e-16  Score=152.70  Aligned_cols=178  Identities=25%  Similarity=0.452  Sum_probs=150.8

Q ss_pred             ChhHHHHHHhhhHHHHhh-cCCCCCCCchhhHHHHHHHHHhccCCccccHHHHHHHHhhHHHHHHhhcccccCC-Ccc--
Q 035814          117 HLSPVAYSLAFPLFIRTF-QGWDPLQNPSYQLELVSMWRQVLDSDHGYVYYAQLVSQAILPAVRASSISNWDAK-DPE--  192 (422)
Q Consensus       117 ~L~~lav~~v~Pllr~~~-~~WdPL~~P~~~l~~l~~wk~lL~~~~~~~~y~~Li~~~~lP~lr~ai~~~Wdp~-d~~--  192 (422)
                      ....+.+..+.|.++..+ .+|++. +|...++.+..|+++|+..    .+++++.++|+|++..+|.+ |||+ +..  
T Consensus        80 ~ye~l~w~~~lp~~~~~~~~~w~~~-~~~~~~~ll~~W~~~Lp~~----~~~~ileqlVlPKL~~~V~~-WdP~s~~~t~  153 (276)
T PF07842_consen   80 PYESLIWEIWLPKVRSAIANEWDPR-DPDPDLSLLEAWSPLLPPW----ILDNILEQLVLPKLQAAVEE-WDPLSDSQTR  153 (276)
T ss_pred             cHHHhhHHHHHHHHHHhhhcccCCC-CCchHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHh-CcccCccccc
Confidence            456788999999999554 799997 7899999999999999875    89999999999999999997 9995 666  


Q ss_pred             ---hHHHHHHhhhhhchhhHHHHhhhhhhHHHHHHhhhccCCCCCCCCchhHHhcChhhhhc-chHH-HHHHHHHHHHHc
Q 035814          193 ---PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGR-KQKG-LFRMILIKLGEV  267 (422)
Q Consensus       193 ---p~l~ll~~W~plLP~~i~dnILeqlIlPKL~~aV~~W~P~~d~~pih~wl~PWlp~Lg~-rl~~-L~~~Ir~KL~~a  267 (422)
                         |+++++..|.|+++..-++.++ ..|.-||+.++++|+|. +  ++..-|.||-++++. .++. +...|.+|++.+
T Consensus       154 ~~~~~h~wl~pwlp~l~~~~l~~l~-~~ir~kl~~~l~~W~~~-~--~~~~~l~~Wk~vf~~~~~~~~~~~~i~Pkl~~~  229 (276)
T PF07842_consen  154 NLVPLHSWLFPWLPLLGSERLEPLY-PAIRRKLRSALDNWHPS-R--SALAMLSPWKDVFIPEEWDKLLLRHILPKLAKF  229 (276)
T ss_pred             ccchHHHHHhccCcccCchhHHHHH-HHHHHHHHHHHHccCcc-c--chhhhhhHHHHhCCHhhHHHHHHHhhchHHHHH
Confidence               8999999999999944455566 67999999999999997 3  688999999999998 6775 777999999999


Q ss_pred             ccccCCCChhhhhhhhhhHHHH----------HHHHHHhhhhHHHHHHH
Q 035814          268 LDAWHPSDASAYILLSPWKNVL----------WEQLMHRYIVPKLQVTV  306 (422)
Q Consensus       268 L~~W~~~d~sa~~~L~pWk~Vf----------~~~~L~k~IlPKL~~~L  306 (422)
                      |++..+++..  +.+.+++.|+          +.+++.++|+||+..+|
T Consensus       230 l~~~~i~p~~--q~l~~~~~vl~W~~~l~~~~l~~ll~~~ffpkwl~~L  276 (276)
T PF07842_consen  230 LREFVINPRQ--QDLKPLRNVLAWKDLLPPSVLVQLLEDEFFPKWLQVL  276 (276)
T ss_pred             HHhCCCChhh--cCHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhhC
Confidence            9987776532  3455555544          88889999999998875

This is thought to be a protein involved in transcriptional regulation due to partial homologies to a transcription repressor and histone-interacting protein []. This entry also contains tuftelin interacting protein 11 which has been identified as both a nuclear and cytoplasmic protein, and has been implicated in the secretory pathway. Sip1, a septin interacting protein [] is also a member of this family. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []

Probab=83.43  E-value=10  Score=33.22  Aligned_cols=65  Identities=6%  Similarity=0.089  Sum_probs=50.7

Q ss_pred             ccchhhhhcccchhhHhhchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 035814           21 AGVTGLAMLKNGTKAQLAGNDGSRIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQ   85 (422)
Q Consensus        21 ~~~~~~~~~~~~~~~i~~~d~~~r~e~d~~~~L~~e~~~l~~~~~~~~~~i~~l~~i~~~i~~~~   85 (422)
                      +|..+..++..=.-.|.+.+.++..-++++..|+.+++.+..++-+.-.+.+.+......+..++
T Consensus        10 ~~~~~~~~ve~L~s~lr~~E~E~~~l~~el~~l~~~r~~l~~Eiv~l~~~~e~~~~~~~~~~~L~   74 (120)
T PF12325_consen   10 SGGPSVQLVERLQSQLRRLEGELASLQEELARLEAERDELREEIVKLMEENEELRALKKEVEELE   74 (120)
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34455556666667888999999999999999999999999998888777777766665555554

The proteins bind to the TATA element of some RNA polymerase II promoters and repress their activity. by competing with the binding of TATA binding protein. TMF1_TATA_bd is the most conserved part of the TMFs []. TMFs are evolutionarily conserved golgins that bind Rab6, a ubiquitous ras-like GTP-binding Golgi protein, and contribute to Golgi organisation in animal [] and plant cells. The Rab6-binding domain appears to be the same region as this C-terminal family [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	422
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-11

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 63.3 bits (153), Expect = 8e-11
 Identities = 52/331 (15%), Positives = 106/331 (32%), Gaps = 69/331 (20%)

Query: 50  AF---C----LQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLT--LESLAN 100
           AF   C      R K   D + AA         ++ +    +        L   L+    
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHI----SLDHHSMTLTPDEVKSLLLKYLDCRPQ 316

Query: 101 DFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQG-WDPLQNPSY--QLELVSMWRQVL 157
           D        +         P   S+     IR     WD  ++ +      ++     VL
Sbjct: 317 DLPREVLTTN---------PRRLSI-IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366

Query: 158 DSDHGYVYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTI 217
           +       + +L   ++ P           A  P  +L  +  W  ++   ++  +++ +
Sbjct: 367 EPAEYRKMFDRL---SVFPP---------SAHIPTILLSLI--WFDVIKSDVMV-VVNKL 411

Query: 218 VMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDAS 277
              K S +V+   P+  T SI   ++  L      +  L R I+     +   +   D  
Sbjct: 412 H--KYS-LVEKQ-PKESTISIPS-IYLELKVKLENEYALHRSIVDHY-NIPKTFDSDD-- 463

Query: 278 AYILLSPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWV--------MSWAS 329
              L+ P+     +Q  + +I   L+       +         F ++         +W +
Sbjct: 464 ---LIPPY----LDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW-N 515

Query: 330 AIPSSPNDFEEIRKWYKGW---KDLLPQELV 357
           A  S  N  ++++  YK +    D   + LV
Sbjct: 516 ASGSILNTLQQLKF-YKPYICDNDPKYERLV 545

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	422
2w6b_A	56	RHO guanine nucleotide exchange factor 7; X-RAY cr	80.86

>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}

Probab=80.86  E-value=4  Score=29.61  Aligned_cols=37  Identities=19%  Similarity=0.266  Sum_probs=33.7

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 035814           45 IKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTL   81 (422)
Q Consensus        45 ~e~d~~~~L~~e~~~l~~~~~~~~~~i~~l~~i~~~i   81 (422)
                      ..+|++..|++|-.++.+.++.|++.-++||.++..+
T Consensus        14 aLkDqV~eL~qe~k~m~k~lEeEqkARk~LE~~vrk~   50 (56)
T 2w6b_A           14 ALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRKV   50 (56)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4589999999999999999999999999999988765

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00