Citrus Sinensis ID: 035901

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-----
Protein Sequence
VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVEQASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKISNESVSEGFYNYSNDAPTLLTDYNNIDASSRSGQSEAEFYESRTEPSNLYDQIVEGTPFQRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELDFFCSQQQEPKTENDVKEPPTGASFDVMRDFYSTAATLLKGKTADVRKKQGVLSTRAASMLVICI
Secondary Structure (PSIPRED)
cHHHHHHHHHccEEEEEEEcccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHccccccccccccccEEEEEEEccccccccHHHHHHHHHHHHHcccccEEEEEcccccccccEEEEEEEEEcccccccccHHHHHHHHcccHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccHHHHHHHHHHHHccccccccccccEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccHHHHccccEEEcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHcccHHHHHHHHHHcccccEcccccHHHHHHHHHHHHccccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHcccccEEEEEcccccccccEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHccccHHHHccccccccccccccccccccccHHHHHcccccccHcccccccHHcHHHccHHccccccccccccccccccccccccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccEEEccccccccHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHEEEEc
Coil and Loop (DISEMBL)
VKDLAAKLQDHINFYIdidtdrllekdSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILGNYkeakigfgagsnikTSILQAIydcpfigagVKELNGMVICVVAtsniignndlQSFLHTFRQITEYTGETIVsfvhepnlepdlLVTTVVTLGLVEQASRKSSIFSRLAHHFPFVFNLLRrnhqqsndtqgnsefdnacvsevigppdtseienkisnesvsegfynysndaptlltdynnidassrsgqseaefyesrtepsnlydqivegtPFQRELLnswnlgpgyqIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELDFfcsqqqepktendvkepptgasfdVMRDFYSTAATLLkgktadvrkkqGVLSTRAASMLVICI
Flexible Loop (DISEMBL)
VKDLAAKLQDHinfyididtdrlLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVEQASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKISNESVSEGFYNYSNDAPTLLTDYNNIDASSRSGQSEAEFYESRTEPSNLYDQIVEGTPFQRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELDFFCSQqqepktendvkeppTGASFDVMRDFYSTAAtllkgktadvrkkqgvlstraasmlvici
Low Complexity Region (SEG)
VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDllvttvvtlglvEQASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKISNESVSEGFYNYSNDAPTLLTDYNNIDASSRSGQSEAEFYESRTEPSNLYDQIVEGTPFQRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELDFFCSQQQEPKTENDVKEPPTGASFDVMRDFYSTAATLLKGKTADVRKKQGVLSTRAASMLVICI
Disordered region (IsUnstruct)
*******LQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVEQASRKSSIFSRLAHHFPFVFNLLR********************************************FYNYS****TLLTD**************************LYDQIVEGTPFQRELLNSWNLGPGYQIAQQWAK*******ASTMIDNLGIFCLPVGVRASEELDFFC********************FDVMRDFYSTAATLLKGKTADVR***GVLSTRAASMLVIC*
Disordered Region (DISOPRED)
**DLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVE******SIFSRLAHHFPFVFNLL***********************************************NYSN****************************************************WNLGPGYQIAQQW***************NLGIFCLPVGVRASE***************************DVMRDFYSTAATLL***************TRAASMLVICI
Disordered Region (DISEMBL)
VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVEQASRKSSIFSRLAHHFPFVFNLLRRNH********NSEFDNACVSEVIGPPDTSEIENKISNESVSEGFYNYSNDAPTLLTDYNNIDAS***************EPSNLYDQIVEGTPFQRELLNSWNLGPGYQIAQ***********ASTMIDNLGIFCLPVGVRASEELDFFCSQ*************PTGASFDVMRDFYSTAATLLKGKTADVRKKQGVLSTRAASMLVICI
Disordered Region (DISPRO)
VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVEQASRKSSIFSRLAHHFPFVFNLLRRN**********************************************S*DAP**LT**************************NLYDQIVEGTPFQRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRAS****************************DV*RDFYSTAATLLKGK*A*****QGVLSTR*AS***ICI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVEQASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKISNESVSEGFYNYSNDAPTLLTDYNNIDASSRSGQSEAEFYESRTEPSNLYDQIVEGTPFQRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELDFFCSQQQEPKTENDVKEPPTGASFDVMRDFYSTAATLLKGKTADVRKKQGVLSTRAASMLVICI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	415	2.2.26 [Sep-21-2011]
Q6F6B5	741	Protein ACCUMULATION AND	yes	no	0.918	0.514	0.433	2e-71

>sp|Q6F6B5|ARC3_ARATH Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 OS=Arabidopsis thaliana GN=ARC3 PE=1 SV=2

 Score =  270 bits (690), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 183/422 (43%), Positives = 250/422 (59%), Gaps = 41/422 (9%)

Query: 1   VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKL 60
           V +LA KLQ H NF IDID + LL+KD VTLDEAL+ ANNAV +A+NA S L S MH   
Sbjct: 193 VNELARKLQQHTNFCIDIDIEVLLQKDLVTLDEALRNANNAVSMAINAASALISGMHGNF 252

Query: 61  IDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGM 120
           ID++H ++KEL+ SE+  IL +YKEAK+GFG G N+KTSIL+AIYDCPF   G+K+LN  
Sbjct: 253 IDVMHKDLKELEGSEVKTILESYKEAKVGFGVGHNLKTSILRAIYDCPFFRPGLKDLNA- 311

Query: 121 VICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVE- 179
           +IC+VA+S  +   D+++ L TFRQ  EYTG+ IVS VHEP+LEP + VTT   L   E 
Sbjct: 312 IICIVASSVPLQKKDVKTILRTFRQTMEYTGDIIVSTVHEPDLEPKVRVTTFFILSSSEV 371

Query: 180 QASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKI 239
           + S K +IFS L    PFV N+  R   Q    + N       VS +    D++++  K 
Sbjct: 372 ETSNKGNIFSGLV---PFVLNIFTRYRSQLQ-KETNIGLGETPVS-IKDSADSTDV--KT 424

Query: 240 SNESVSEGFYNYSNDAPTLLTDYNNIDASSRSGQSEAEFYESRTEPS-----NLYDQIVE 294
           SN+++ E    +  D+  LL    N D        ++E+     EPS     +L D+ VE
Sbjct: 425 SNQNIEE----FEIDSEDLLEVSENGD--------DSEYPLKEGEPSRNSRLDLKDENVE 472

Query: 295 G-TPFQRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELDFF 353
                QRE + +W++  GYQI Q+W     ADS   T + +LGI  LPVGVR S++L+  
Sbjct: 473 DFGAIQREPIANWSMDQGYQIEQKW----QADS-GDTAVLSLGIVNLPVGVRPSKKLNSN 527

Query: 354 CSQQQEPKTENDVKEP----PTGASFDVMRDFYSTAATLLKGKTADVRKKQGVLSTRAAS 409
            S   +   + D +E     P G++    +D   TA+TLL  K AD  K++  LS RA+S
Sbjct: 528 LSVASQLSRKADSREESFFNPNGST----KDSSDTASTLLSEKYADFTKQRN-LSARASS 582

Query: 410 ML 411
           ML
Sbjct: 583 ML 584

Z-ring accessory protein involved in the initiation of plastid division and division site placement (might functionally replace bacterial MinC). May control the rate of chloroplast expansion. Seems to influence stromule (stroma-filled tubular extensions of the plastid envelope membrane) length and frequency.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	415
297738315	696	unnamed protein product [Vitis vinifera]	0.990	0.590	0.527	1e-114
359473543	727	PREDICTED: protein ACCUMULATION AND REPL	0.990	0.565	0.527	1e-114
255561739	760	1-phosphatidylinositol-4-phosphate 5-kin	0.920	0.502	0.487	1e-103
449519575	707	PREDICTED: protein ACCUMULATION AND REPL	0.987	0.579	0.446	2e-88
449466963	489	PREDICTED: protein ACCUMULATION AND REPL	0.946	0.803	0.444	2e-83
297842247	739	hypothetical protein ARALYDRAFT_895368 [	0.927	0.520	0.453	7e-72
49614228	741	hypothetical protein [Arabidopsis thalia	0.918	0.514	0.438	5e-70
79380731	741	GTP binding protein [Arabidopsis thalian	0.918	0.514	0.433	1e-69
5882723	701	F25A4.3 [Arabidopsis thaliana]	0.824	0.487	0.399	7e-62
12323909	717	hypothetical protein; 33426-38373 [Arabi	0.824	0.476	0.399	8e-62

>gi|297738315|emb|CBI27516.3| unnamed protein product [Vitis vinifera]

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/434 (52%), Positives = 295/434 (67%), Gaps = 23/434 (5%)

Query: 1   VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKL 60
           VK+L  +LQ+H NF I IDTD LL+KD VTLDEALKTA+N V LA+NAIS L S MH+KL
Sbjct: 103 VKNLVERLQEHTNFCIVIDTDTLLKKDLVTLDEALKTADNGVLLAINAISVLISGMHKKL 162

Query: 61  IDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGM 120
           ID  H N+KELK  EI KIL ++KEAKIGFGAG NI+TSILQAIYDCPF+   +K+LNG 
Sbjct: 163 IDAPHDNMKELKGPEIIKILESHKEAKIGFGAGYNIETSILQAIYDCPFLSVCLKDLNGT 222

Query: 121 VICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVEQ 180
           VIC++A+S II N+D+ SFLH FR+ TE T E I+S +HEPNLEP+L+VTTV+ LG   Q
Sbjct: 223 VICILASSVIINNSDVLSFLHVFRKTTECTREIIISIIHEPNLEPNLIVTTVIILGSTGQ 282

Query: 181 -ASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKI 239
            AS+KSSI S+LA HFPF+FNLL  +H Q N TQ +   +   + ++I   D+ E++  I
Sbjct: 283 PASQKSSILSQLAQHFPFIFNLLGGHHLQPNGTQESPSIEGPGLPKLINAHDSGEMQTGI 342

Query: 240 SNESVSEGFYNYSNDAPTLLTDYNN-----IDASSRSGQSEAEFYESRTEPSNLYDQIVE 294
             + +++    YS +   LL   ++      D++ R  QSE    E+  +  N  DQ  E
Sbjct: 343 PMDGIADDMDMYSEELQMLLGRNDHEINASRDSNGRYEQSELGCSEATIDSLNFNDQNTE 402

Query: 295 G-TPFQRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELD-- 351
           G + FQRE L  WNLGPG QIAQ+WAKER+ADS A+T +DNL IF LPVGVR  EEL+  
Sbjct: 403 GISAFQREPLIGWNLGPGDQIAQEWAKERAADSGATTTLDNLSIFHLPVGVRPLEELNDS 462

Query: 352 ---FFCSQQQEPKTENDVKEPP-----------TGASFDVMRDFYSTAATLLKGKTADVR 397
                 +Q  E K  +++K  P           TGA F+ + D Y++A+T+LKGK AD+ 
Sbjct: 463 PNISNTTQHPETKIGDEIKAQPLVTSRMPWDELTGAGFEAVMDLYNSASTVLKGKYADIP 522

Query: 398 KKQGVLSTRAASML 411
           KKQG+LS RAASML
Sbjct: 523 KKQGMLSVRAASML 536

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473543|ref|XP_002267944.2| PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3-like [Vitis vinifera]

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/434 (52%), Positives = 295/434 (67%), Gaps = 23/434 (5%)

Query: 1   VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKL 60
           VK+L  +LQ+H NF I IDTD LL+KD VTLDEALKTA+N V LA+NAIS L S MH+KL
Sbjct: 134 VKNLVERLQEHTNFCIVIDTDTLLKKDLVTLDEALKTADNGVLLAINAISVLISGMHKKL 193

Query: 61  IDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGM 120
           ID  H N+KELK  EI KIL ++KEAKIGFGAG NI+TSILQAIYDCPF+   +K+LNG 
Sbjct: 194 IDAPHDNMKELKGPEIIKILESHKEAKIGFGAGYNIETSILQAIYDCPFLSVCLKDLNGT 253

Query: 121 VICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVEQ 180
           VIC++A+S II N+D+ SFLH FR+ TE T E I+S +HEPNLEP+L+VTTV+ LG   Q
Sbjct: 254 VICILASSVIINNSDVLSFLHVFRKTTECTREIIISIIHEPNLEPNLIVTTVIILGSTGQ 313

Query: 181 -ASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKI 239
            AS+KSSI S+LA HFPF+FNLL  +H Q N TQ +   +   + ++I   D+ E++  I
Sbjct: 314 PASQKSSILSQLAQHFPFIFNLLGGHHLQPNGTQESPSIEGPGLPKLINAHDSGEMQTGI 373

Query: 240 SNESVSEGFYNYSNDAPTLLTDYNN-----IDASSRSGQSEAEFYESRTEPSNLYDQIVE 294
             + +++    YS +   LL   ++      D++ R  QSE    E+  +  N  DQ  E
Sbjct: 374 PMDGIADDMDMYSEELQMLLGRNDHEINASRDSNGRYEQSELGCSEATIDSLNFNDQNTE 433

Query: 295 G-TPFQRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELD-- 351
           G + FQRE L  WNLGPG QIAQ+WAKER+ADS A+T +DNL IF LPVGVR  EEL+  
Sbjct: 434 GISAFQREPLIGWNLGPGDQIAQEWAKERAADSGATTTLDNLSIFHLPVGVRPLEELNDS 493

Query: 352 ---FFCSQQQEPKTENDVKEPP-----------TGASFDVMRDFYSTAATLLKGKTADVR 397
                 +Q  E K  +++K  P           TGA F+ + D Y++A+T+LKGK AD+ 
Sbjct: 494 PNISNTTQHPETKIGDEIKAQPLVTSRMPWDELTGAGFEAVMDLYNSASTVLKGKYADIP 553

Query: 398 KKQGVLSTRAASML 411
           KKQG+LS RAASML
Sbjct: 554 KKQGMLSVRAASML 567

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255561739|ref|XP_002521879.1| 1-phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis] gi|223538917|gb|EEF40515.1| 1-phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis]

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/429 (48%), Positives = 282/429 (65%), Gaps = 47/429 (10%)

Query: 1   VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKL 60
           VK+L  ++Q++ NF IDIDTD LL+KD VTLDEALKTAN AV LA+NA+S L S+MH KL
Sbjct: 201 VKNLVGEIQEYTNFCIDIDTDTLLKKDLVTLDEALKTANTAVLLAMNAVSILISEMHLKL 260

Query: 61  IDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGM 120
              +H+NVKEL +SE+ KIL ++KEAKIGFGAG+++K+SIL+A+YDCPFIGAG++  NG+
Sbjct: 261 FAALHNNVKELTISEVLKILESHKEAKIGFGAGNSVKSSILEALYDCPFIGAGLENSNGI 320

Query: 121 VICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVE- 179
           +IC +A+S+ I N D+ S L TF Q  +Y GE I+S  HEPNL+ +++VTT++ L   E 
Sbjct: 321 IICNIASSDFIENRDVDSSLLTFHQTAKYMGEIIISSAHEPNLDSNMIVTTIIMLSGREI 380

Query: 180 QASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKI 239
           Q  ++SS+ SRLA HFPFV  LLRR HQ+SND +G +E  +A +S     P+ + +E++ 
Sbjct: 381 QTHQRSSLLSRLAQHFPFVSKLLRRQHQKSNDNEGVNEPKHAQLSTETNLPELTAMESRN 440

Query: 240 SNESVSEGFYNYSNDAPTLLTDYNNIDASSRSGQSEAEFYESRTEPSNLYDQIVEGTPFQ 299
           S E ++EG   +S                           E  T+PS  Y  + +    Q
Sbjct: 441 SAEEIAEGTDKHSE--------------------------ECETQPSRNYYDLYKTPALQ 474

Query: 300 RELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEE----LDFF-C 354
           RE L SWNLGPGYQIAQ+WA+ER+ D   ++++D L IF LPVGVR+ EE    L+F   
Sbjct: 475 REPLISWNLGPGYQIAQEWARERAGD---TSILDTLSIFRLPVGVRSPEESKEGLNFLHA 531

Query: 355 SQQQEPKTENDVKEPP------------TGASFDVMRDFYSTAATLLKGKTADVRKKQGV 402
           +  QEPKT   VKE              + A F ++RDFY+ A+T+LK + AD  KKQGV
Sbjct: 532 ADFQEPKTVGVVKEQKHVSSSISSWGALSDAGFVLVRDFYNNASTMLKSRNADAPKKQGV 591

Query: 403 LSTRAASML 411
           LS RAASML
Sbjct: 592 LSVRAASML 600

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449519575|ref|XP_004166810.1| PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3-like, partial [Cucumis sativus]

 Score =  332 bits (852), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 190/426 (44%), Positives = 276/426 (64%), Gaps = 16/426 (3%)

Query: 1   VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKL 60
           VK L  +L++H +F IDIDTDRLLEKD VTLD+A+++ANNAV LA+N++S + S+M  K 
Sbjct: 202 VKRLVGRLKEHTSFLIDIDTDRLLEKDLVTLDDAVRSANNAVLLAINSMSIVKSEMIIKF 261

Query: 61  IDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGM 120
           +D   +++KEL   ++ +IL N KE KIGFGAG N +TSIL++IYDCPF+   +K+L GM
Sbjct: 262 VDEPQNDLKELGAMDVMEILENLKEGKIGFGAGHNFRTSILKSIYDCPFLTVHLKDLKGM 321

Query: 121 VICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLG-LVE 179
           V+C+VA+S+II +ND  + L TFR++T YTG+ I+S + + N+EP+ L+TTV+ +G   +
Sbjct: 322 VVCIVASSSIIDDNDKSTLLKTFREVTTYTGKVILSTIQDLNIEPNFLMTTVLIVGSTKQ 381

Query: 180 QASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKI 239
           Q+S+ SSI SRLA  FP VF LL +  +   + + ++  ++A  S V    D+     KI
Sbjct: 382 QSSKSSSILSRLAQRFPLVFKLLWKPQELLVEAEESNMPEDASPSNVRQSSDSEVNVTKI 441

Query: 240 SNESVSEGFYNYSNDAPTLLTDYNNID--ASSRSGQSEAEFYESRTEPSNLY-DQIVEGT 296
           ++E + +  Y +  +     T  N  D  +SS S Q EA    + T  S  + + I  G 
Sbjct: 442 ASEGIDKDSY-HGTEPENCQTTSNGSDLVSSSDSEQLEAGLLGTDTNSSLPFSNGISRGA 500

Query: 297 PFQRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELDFFCSQ 356
             +R+ L+ WNLGPG+QIAQQWA+ER+AD+  ++ +DN+ IF LPVGVR SEE+      
Sbjct: 501 SLRRDPLHRWNLGPGHQIAQQWARERAADAELASALDNISIFDLPVGVRPSEEVHDKDLP 560

Query: 357 QQEPKTENDVK-----------EPPTGASFDVMRDFYSTAATLLKGKTADVRKKQGVLST 405
             E K E   K              T AS +V+++FY T++  LKGK+AD+ KKQG+LS 
Sbjct: 561 NPEMKYEKKSKASISTSRFSSQNSLTDASLEVIKEFYDTSSAFLKGKSADIPKKQGLLSV 620

Query: 406 RAASML 411
           RAASML
Sbjct: 621 RAASML 626

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449466963|ref|XP_004151195.1| PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3-like, partial [Cucumis sativus]

 Score =  316 bits (809), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 182/409 (44%), Positives = 264/409 (64%), Gaps = 16/409 (3%)

Query: 18  IDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIF 77
           IDTDRLLEKD VTLD+A+++ANNAV LA+N++S + S+M  K +D   +++KEL   ++ 
Sbjct: 1   IDTDRLLEKDLVTLDDAVRSANNAVLLAINSMSIVKSEMIIKFVDEPQNDLKELGAMDVM 60

Query: 78  KILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQ 137
           +IL N KE KIGFGAG N +TSIL++IYDCPF+   +K+L GMV+C+VA+S+II +ND  
Sbjct: 61  EILENLKEGKIGFGAGHNFRTSILKSIYDCPFLTVHLKDLKGMVVCIVASSSIIDDNDKS 120

Query: 138 SFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLG-LVEQASRKSSIFSRLAHHFP 196
           + L TFR++T YTG+ I+S + + N+EP+ L+TTV+ +G   +Q+S+ SSI SRLA  FP
Sbjct: 121 TLLKTFREVTTYTGKVILSTIQDLNIEPNFLMTTVLIVGSTKQQSSKSSSILSRLAQRFP 180

Query: 197 FVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKISNESVSEGFYNYSNDAP 256
            VF LL +  +   + + ++  ++A  S V    D+     KI++E + +  Y +  +  
Sbjct: 181 LVFKLLWKPQELLVEAEESNMPEDASPSNVRQSSDSEVNVTKIASEGIDKDSY-HGTEPE 239

Query: 257 TLLTDYNNID--ASSRSGQSEAEFYESRTEPSNLY-DQIVEGTPFQRELLNSWNLGPGYQ 313
              T  N  D  +SS S Q EA    + T  S  + + I  G   +R+ L+ WNLGPG+Q
Sbjct: 240 NCQTTSNGSDLVSSSDSEQLEAGLLGTDTNSSLPFSNGISRGASLRRDPLHRWNLGPGHQ 299

Query: 314 IAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELDFFCSQQQEPKTENDVK------ 367
           IAQQWA+ER+AD+  ++ +DN+ IF LPVGVR SEE+        E K E   K      
Sbjct: 300 IAQQWARERAADAELASALDNISIFDLPVGVRPSEEVHDKDLPNPEMKYEKKSKASISTS 359

Query: 368 -----EPPTGASFDVMRDFYSTAATLLKGKTADVRKKQGVLSTRAASML 411
                   T AS +V+++FY T++  LKGK+AD+ KKQG+LS RAASML
Sbjct: 360 RFSSQNSLTDASLEVIKEFYDTSSAFLKGKSADIPKKQGLLSVRAASML 408

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842247|ref|XP_002889005.1| hypothetical protein ARALYDRAFT_895368 [Arabidopsis lyrata subsp. lyrata] gi|297334846|gb|EFH65264.1| hypothetical protein ARALYDRAFT_895368 [Arabidopsis lyrata subsp. lyrata]

 Score =  277 bits (708), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 189/417 (45%), Positives = 249/417 (59%), Gaps = 32/417 (7%)

Query: 1   VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKL 60
           V +LA KLQ H NF IDID + LL+KD VTLDEAL+ ANNAV +AVNA S L S MH   
Sbjct: 192 VNELARKLQQHTNFCIDIDIEVLLQKDLVTLDEALRNANNAVSMAVNAASALISGMHVNF 251

Query: 61  IDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGM 120
           ID +H ++KEL+ SE+  IL +YKEAK+GFG G N+KTSIL+AIYDCPF   G+K+LN  
Sbjct: 252 IDAMHKDLKELEGSEVKMILESYKEAKVGFGVGHNLKTSILRAIYDCPFFRPGLKDLNA- 310

Query: 121 VICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVEQ 180
           +ICVVA+S  +   D+++ L TFRQ  EY+G+ IVS VHEP+LEP + VTT   L   E+
Sbjct: 311 IICVVASSAPLQKKDVKTILRTFRQTMEYSGDIIVSTVHEPDLEPKVRVTTFFILSSSEE 370

Query: 181 -ASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKI 239
             S K +IFS L    PFV N+  R   Q    + NS      VS + G  D+  I+ K 
Sbjct: 371 DTSIKGNIFSGLV---PFVLNIFTRYRSQLQ-KETNSGLRETPVS-IKGSADS--IDVKS 423

Query: 240 SNESVSEGFYNYSNDAPTLLTDYNNIDASSRSGQSEAEFYESRTEPSNLYDQIVEG-TPF 298
           SN++V E    +  D+  LL    N D    S  S  E   SR    +L D+ +E     
Sbjct: 424 SNQNVEE----FEIDSEDLLEISENGD----SEYSLKEGGPSRNSRLDLEDENMEDFGAI 475

Query: 299 QRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELDFFCSQQQ 358
           QRE + +W++ PGYQI Q+W     ADS  S ++ +LGI  LPVGVR S++L+       
Sbjct: 476 QREPIANWSMDPGYQIEQKWP----ADSGDSAVL-SLGIVNLPVGVRPSKKLNSTLGVAS 530

Query: 359 EPKTENDVKEP----PTGASFDVMRDFYSTAATLLKGKTADVRKKQGVLSTRAASML 411
           +P  + D +E     P G++    +D    A+TLL  K AD  K++  LS RAASML
Sbjct: 531 QPSRKADSREESFFNPNGST----KDSSDNASTLLSEKYADFTKQRN-LSARAASML 582

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|49614228|dbj|BAD26731.1| hypothetical protein [Arabidopsis thaliana]

 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 185/422 (43%), Positives = 250/422 (59%), Gaps = 41/422 (9%)

Query: 1   VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKL 60
           V +LA KLQ H NF IDID + LL+KD VTLDEAL+ ANNAV +A+NA S L S MH   
Sbjct: 193 VNELARKLQQHTNFCIDIDIEVLLQKDLVTLDEALRNANNAVSMAINAASALISGMHGNF 252

Query: 61  IDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGM 120
           ID++H ++KEL+ SE+  IL +YKEAK+GFG G N+KTSIL+AIYDCPF   G+K+LN  
Sbjct: 253 IDVMHKDLKELEGSEVKTILESYKEAKVGFGVGHNLKTSILRAIYDCPFFRPGLKDLNA- 311

Query: 121 VICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLV-E 179
           +IC+VA+S  +   D+++ L TFRQ  EYTG+ IVS VHEP+LEP + VTT   L    E
Sbjct: 312 IICIVASSVPLQKKDVKTILRTFRQTMEYTGDIIVSTVHEPDLEPKVRVTTFFILSSSEE 371

Query: 180 QASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKI 239
           + S K +IFS L    PFV N+  R   Q    + N       VS +    D+++I  K 
Sbjct: 372 ETSNKGNIFSGLV---PFVLNIFTRYRSQLQ-KETNIGLGETPVS-IKDSADSTDI--KT 424

Query: 240 SNESVSEGFYNYSNDAPTLLTDYNNIDASSRSGQSEAEFYESRTEPS-----NLYDQIVE 294
           SN++V E    +  D+  LL    N D        ++E+     EPS     +L D+ VE
Sbjct: 425 SNQNVEE----FEIDSEDLLEVSENGD--------DSEYPLKEGEPSRNSRLDLKDENVE 472

Query: 295 G-TPFQRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELDFF 353
                QRE + +W++  GYQI Q+W     ADS   T + +LGI  LPVGVR S++L+  
Sbjct: 473 DFGAIQREPIANWSMDQGYQIEQKW----QADS-GDTAVLSLGIVNLPVGVRPSKKLNSN 527

Query: 354 CSQQQEPKTENDVKEP----PTGASFDVMRDFYSTAATLLKGKTADVRKKQGVLSTRAAS 409
            S   +   + D +E     P G++    +D   TA+TLL  K AD  K++  LS RA+S
Sbjct: 528 LSVASQLSRKADSREESFFNPNGST----KDSSDTASTLLSEKYADFTKQRN-LSARASS 582

Query: 410 ML 411
           ML
Sbjct: 583 ML 584

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79380731|ref|NP_177638.2| GTP binding protein [Arabidopsis thaliana] gi|327507752|sp|Q6F6B5.2|ARC3_ARATH RecName: Full=Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3; Flags: Precursor gi|332197540|gb|AEE35661.1| GTP binding protein [Arabidopsis thaliana]

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 183/422 (43%), Positives = 250/422 (59%), Gaps = 41/422 (9%)

Query: 1   VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKL 60
           V +LA KLQ H NF IDID + LL+KD VTLDEAL+ ANNAV +A+NA S L S MH   
Sbjct: 193 VNELARKLQQHTNFCIDIDIEVLLQKDLVTLDEALRNANNAVSMAINAASALISGMHGNF 252

Query: 61  IDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGM 120
           ID++H ++KEL+ SE+  IL +YKEAK+GFG G N+KTSIL+AIYDCPF   G+K+LN  
Sbjct: 253 IDVMHKDLKELEGSEVKTILESYKEAKVGFGVGHNLKTSILRAIYDCPFFRPGLKDLNA- 311

Query: 121 VICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVE- 179
           +IC+VA+S  +   D+++ L TFRQ  EYTG+ IVS VHEP+LEP + VTT   L   E 
Sbjct: 312 IICIVASSVPLQKKDVKTILRTFRQTMEYTGDIIVSTVHEPDLEPKVRVTTFFILSSSEV 371

Query: 180 QASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKI 239
           + S K +IFS L    PFV N+  R   Q    + N       VS +    D++++  K 
Sbjct: 372 ETSNKGNIFSGLV---PFVLNIFTRYRSQLQ-KETNIGLGETPVS-IKDSADSTDV--KT 424

Query: 240 SNESVSEGFYNYSNDAPTLLTDYNNIDASSRSGQSEAEFYESRTEPS-----NLYDQIVE 294
           SN+++ E    +  D+  LL    N D        ++E+     EPS     +L D+ VE
Sbjct: 425 SNQNIEE----FEIDSEDLLEVSENGD--------DSEYPLKEGEPSRNSRLDLKDENVE 472

Query: 295 G-TPFQRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELDFF 353
                QRE + +W++  GYQI Q+W     ADS   T + +LGI  LPVGVR S++L+  
Sbjct: 473 DFGAIQREPIANWSMDQGYQIEQKW----QADS-GDTAVLSLGIVNLPVGVRPSKKLNSN 527

Query: 354 CSQQQEPKTENDVKEP----PTGASFDVMRDFYSTAATLLKGKTADVRKKQGVLSTRAAS 409
            S   +   + D +E     P G++    +D   TA+TLL  K AD  K++  LS RA+S
Sbjct: 528 LSVASQLSRKADSREESFFNPNGST----KDSSDTASTLLSEKYADFTKQRN-LSARASS 582

Query: 410 ML 411
           ML
Sbjct: 583 ML 584

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|5882723|gb|AAD55276.1|AC008263_7 F25A4.3 [Arabidopsis thaliana]

 Score =  244 bits (622), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 168/421 (39%), Positives = 233/421 (55%), Gaps = 79/421 (18%)

Query: 1   VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKL 60
           V +LA KLQ H NF IDID + LL+KD VTLDEAL+ ANNAV +A+NA S L S MH   
Sbjct: 193 VNELARKLQQHTNFCIDIDIEVLLQKDLVTLDEALRNANNAVSMAINAASALISGMHGNF 252

Query: 61  IDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGM 120
           ID++H ++KEL+ SE+  IL +YKEAK+GFG G N+KTSIL+AIYDCPF   G+K+LN  
Sbjct: 253 IDVMHKDLKELEGSEVKTILESYKEAKVGFGVGHNLKTSILRAIYDCPFFRPGLKDLNA- 311

Query: 121 VICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVEQ 180
           +IC+VA+S  +   D+++ L TFRQ  EYTG+ IVS VHEP+LEP L   T + LG    
Sbjct: 312 IICIVASSVPLQKKDVKTILRTFRQTMEYTGDIIVSTVHEPDLEPKLQKETNIGLGETPV 371

Query: 181 ASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKIS 240
           + + S+                                            D++++  K S
Sbjct: 372 SIKDSA--------------------------------------------DSTDV--KTS 385

Query: 241 NESVSEGFYNYSNDAPTLLTDYNNIDASSRSGQSEAEFYESRTEPS-----NLYDQIVEG 295
           N+++ E    +  D+  LL    N D        ++E+     EPS     +L D+ VE 
Sbjct: 386 NQNIEE----FEIDSEDLLEVSENGD--------DSEYPLKEGEPSRNSRLDLKDENVED 433

Query: 296 -TPFQRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELDFFC 354
               QRE + +W++  GYQI Q+W     ADS   T + +LGI  LPVGVR S++L+   
Sbjct: 434 FGAIQREPIANWSMDQGYQIEQKW----QADS-GDTAVLSLGIVNLPVGVRPSKKLNSNL 488

Query: 355 SQQQEPKTENDVKEP----PTGASFDVMRDFYSTAATLLKGKTADVRKKQGVLSTRAASM 410
           S   +   + D +E     P G++    +D   TA+TLL  K AD  K++  LS RA+SM
Sbjct: 489 SVASQLSRKADSREESFFNPNGST----KDSSDTASTLLSEKYADFTKQRN-LSARASSM 543

Query: 411 L 411
           L
Sbjct: 544 L 544

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|12323909|gb|AAG51935.1|AC013258_29 hypothetical protein; 33426-38373 [Arabidopsis thaliana]

 Score =  244 bits (622), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 168/421 (39%), Positives = 233/421 (55%), Gaps = 79/421 (18%)

Query: 1   VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKL 60
           V +LA KLQ H NF IDID + LL+KD VTLDEAL+ ANNAV +A+NA S L S MH   
Sbjct: 193 VNELARKLQQHTNFCIDIDIEVLLQKDLVTLDEALRNANNAVSMAINAASALISGMHGNF 252

Query: 61  IDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGM 120
           ID++H ++KEL+ SE+  IL +YKEAK+GFG G N+KTSIL+AIYDCPF   G+K+LN  
Sbjct: 253 IDVMHKDLKELEGSEVKTILESYKEAKVGFGVGHNLKTSILRAIYDCPFFRPGLKDLNA- 311

Query: 121 VICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVEQ 180
           +IC+VA+S  +   D+++ L TFRQ  EYTG+ IVS VHEP+LEP L   T + LG    
Sbjct: 312 IICIVASSVPLQKKDVKTILRTFRQTMEYTGDIIVSTVHEPDLEPKLQKETNIGLGETPV 371

Query: 181 ASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKIS 240
           + + S+                                            D++++  K S
Sbjct: 372 SIKDSA--------------------------------------------DSTDV--KTS 385

Query: 241 NESVSEGFYNYSNDAPTLLTDYNNIDASSRSGQSEAEFYESRTEPS-----NLYDQIVEG 295
           N+++ E    +  D+  LL    N D        ++E+     EPS     +L D+ VE 
Sbjct: 386 NQNIEE----FEIDSEDLLEVSENGD--------DSEYPLKEGEPSRNSRLDLKDENVED 433

Query: 296 -TPFQRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELDFFC 354
               QRE + +W++  GYQI Q+W     ADS   T + +LGI  LPVGVR S++L+   
Sbjct: 434 FGAIQREPIANWSMDQGYQIEQKW----QADS-GDTAVLSLGIVNLPVGVRPSKKLNSNL 488

Query: 355 SQQQEPKTENDVKEP----PTGASFDVMRDFYSTAATLLKGKTADVRKKQGVLSTRAASM 410
           S   +   + D +E     P G++    +D   TA+TLL  K AD  K++  LS RA+SM
Sbjct: 489 SVASQLSRKADSREESFFNPNGST----KDSSDTASTLLSEKYADFTKQRN-LSARASSM 543

Query: 411 L 411
           L
Sbjct: 544 L 544

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	415
TAIR|locus:2027242	741	ARC3 "ACCUMULATION AND REPLICA	0.785	0.439	0.431	4.2e-61

TAIR|locus:2027242 ARC3 "ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 606 (218.4 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
 Identities = 148/343 (43%), Positives = 199/343 (58%)

Query:     1 VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKL 60
             V +LA KLQ H NF IDID + LL+KD VTLDEAL+ ANNAV +A+NA S L S MH   
Sbjct:   193 VNELARKLQQHTNFCIDIDIEVLLQKDLVTLDEALRNANNAVSMAINAASALISGMHGNF 252

Query:    61 IDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGM 120
             ID++H ++KEL+ SE+  IL +YKEAK+GFG G N+KTSIL+AIYDCPF   G+K+LN  
Sbjct:   253 IDVMHKDLKELEGSEVKTILESYKEAKVGFGVGHNLKTSILRAIYDCPFFRPGLKDLNA- 311

Query:   121 VICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDXXXXXXXXXXXXE- 179
             +IC+VA+S  +   D+++ L TFRQ  EYTG+ IVS VHEP+LEP             E 
Sbjct:   312 IICIVASSVPLQKKDVKTILRTFRQTMEYTGDIIVSTVHEPDLEPKVRVTTFFILSSSEV 371

Query:   180 QASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKI 239
             + S K +IFS L    PFV N+  R   Q    + N       VS +    D++++  K 
Sbjct:   372 ETSNKGNIFSGLV---PFVLNIFTRYRSQLQK-ETNIGLGETPVS-IKDSADSTDV--KT 424

Query:   240 SNESVSEGFYNYSNDAPTLLTDYNNIDASSRSGQSEAEFYESRTEPSNLYDQIVEGT-PF 298
             SN+++ E    +  D+  LL    N D  S     E E   SR    +L D+ VE     
Sbjct:   425 SNQNIEE----FEIDSEDLLEVSENGD-DSEYPLKEGE--PSRNSRLDLKDENVEDFGAI 477

Query:   299 QRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLP 341
             QRE + +W++  GYQI Q+W  +    +  S  I NL +   P
Sbjct:   478 QREPIANWSMDQGYQIEQKWQADSGDTAVLSLGIVNLPVGVRP 520

GO:0005525 "GTP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0051258 "protein polymerization" evidence=IEA

GO:0009707 "chloroplast outer membrane" evidence=IDA

GO:0010020 "chloroplast fission" evidence=IMP

GO:0035452 "extrinsic to plastid membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0043621 "protein self-association" evidence=IDA;IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	415
cd02201	304	cd02201, FtsZ_type1, FtsZ is a GTPase that is simi	1e-05

>gnl|CDD|100021 cd02201, FtsZ_type1, FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes

 Score = 46.7 bits (112), Expect = 1e-05
 Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 32/182 (17%)

Query: 6   AKLQDHINFYIDIDTDRLLE--KDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDI 63
            +L+ H++  I I  D+LLE    ++ L EA K A++ +  AV  IS L       LI++
Sbjct: 141 EELRKHVDTLIVIPNDKLLEVVDKNLPLLEAFKLADDVLAQAVKGISDLI--TKPGLINL 198

Query: 64  VHSNVKELKVSEIFKILGNYKEAKIGFGAGS---NIKTSILQAIYDCPFI-GAGVKELNG 119
             ++VK         ++ N   A +G G  S       +  +AI   P +    +    G
Sbjct: 199 DFADVK--------TVMKNKGVALMGIGEASGENRAIEAAEKAI-SSPLLEDDSISGAKG 249

Query: 120 MVICVVATSNIIGNNDLQSFLHTFRQITEYTGE-------TIVSFVHEPNLEPDLLVTTV 172
           +++      NI G +DL   L    +  E   E        I     + +LE ++ VT +
Sbjct: 250 VLV------NITGGSDLT--LEEVNEAAEIIKEKVDPDANIIFGATIDESLEDEIRVTVI 301

Query: 173 VT 174
            T
Sbjct: 302 AT 303

FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. Length = 304

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	415
PRK09330	384	cell division protein FtsZ; Validated	100.0
COG0206	338	FtsZ Cell division GTPase [Cell division and chrom	100.0
TIGR00065	349	ftsZ cell division protein FtsZ. This family consi	99.98
PRK13018	378	cell division protein FtsZ; Provisional	99.98
cd02201	304	FtsZ_type1 FtsZ is a GTPase that is similar to the	99.97
cd02191	303	FtsZ FtsZ is a GTPase that is similar to the eukar	99.96
cd02202	349	FtsZ_type2 FtsZ is a GTPase that is similar to the	99.88
PF12327	95	FtsZ_C: FtsZ family, C-terminal domain; InterPro:	99.86
smart00865	120	Tubulin_C Tubulin/FtsZ family, C-terminal domain.	99.23
cd00286	328	Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin	98.16
cd06059	382	Tubulin The tubulin superfamily includes five dist	95.18
cd02190	379	epsilon_tubulin The tubulin superfamily includes f	94.92
PTZ00387	465	epsilon tubulin; Provisional	93.84

>PRK09330 cell division protein FtsZ; Validated

Probab=100.00  E-value=9.4e-36  Score=295.84  Aligned_cols=162  Identities=20%  Similarity=0.293  Sum_probs=156.9

Q ss_pred             HHHHHHHhccceEEEecCcccccc-c-cccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHh
Q 035901            3 DLAAKLQDHINFYIDIDTDRLLEK-D-SVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKIL   80 (415)
Q Consensus         3 ~lI~kLqe~vd~lIVI~nDrLLe~-D-~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL   80 (415)
                      .-+++|++++|++||||||+|++. + ..++++||+.||++|..+|++|+++|+.+          |++|+||+||+++|
T Consensus       151 ~gL~~L~~~~D~vIvi~Nd~L~~~~~~~~~l~~Af~~ad~vL~~~v~~It~~i~~p----------G~iNvDfaDvk~vm  220 (384)
T PRK09330        151 EGIEELRKHVDTLIVIPNDKLLEVVDKKTPLLDAFKAADDVLRQAVQGITDLITKP----------GLINLDFADVKTVM  220 (384)
T ss_pred             HHHHHHHHHCCEEEEEecHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcccCCHHHHHHHH
Confidence            458899999999999999999998 5 69999999999999999999999999999          99999999999999


Q ss_pred             hccCceeEecccccchhhHHH--HHhhhCCccccc-cccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEEee
Q 035901           81 GNYKEAKIGFGAGSNIKTSIL--QAIYDCPFIGAG-VKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSF  157 (415)
Q Consensus        81 ~~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~g-I~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIfg~  157 (415)
                      ++.|.|+||||.|+|++|+.+  +.|++||||+.. |++|++ +||||+|+.+|++.|++++.+.|++.++++.+||||.
T Consensus       221 ~~~G~a~~G~G~a~g~~ra~~A~~~Ai~spLl~~~~i~~A~~-vLv~I~g~~~l~l~e~~~~~~~i~~~~~~~a~Ii~G~  299 (384)
T PRK09330        221 SEMGLAMMGIGEASGEDRAREAAEKAISSPLLEDVDISGAKG-VLVNITGGPDLTLFEVEEAAEIIREAADPDANIIFGT  299 (384)
T ss_pred             hcCCeEEEEEEEecCccHHHHHHHHHHhCcCcCCCChhhcce-EEEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEEee
Confidence            999999999999999999999  999999999965 999999 9999999999999999999999999999999999999


Q ss_pred             ecCCCCCCCeEEEEEEEe
Q 035901          158 VHEPNLEPDLLVTTVVTL  175 (415)
Q Consensus       158 ~~dp~ledel~VT~Iatl  175 (415)
                      ++||+++++++||+|||=
T Consensus       300 ~~d~~l~~~i~VtviatG  317 (384)
T PRK09330        300 VIDEELGDEIRVTVIATG  317 (384)
T ss_pred             eeCCCcCCeEEEEEEEcc
Confidence            999999999999999974

>COG0206 FtsZ Cell division GTPase [Cell division and chromosome partitioning]

Probab=100.00  E-value=4.8e-33  Score=273.28  Aligned_cols=164  Identities=16%  Similarity=0.248  Sum_probs=158.9

Q ss_pred             HHHHHHhccceEEEecCcccccc-ccccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhhc
Q 035901            4 LAAKLQDHINFYIDIDTDRLLEK-DSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILGN   82 (415)
Q Consensus         4 lI~kLqe~vd~lIVI~nDrLLe~-D~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~~   82 (415)
                      =|++|++++|++||||||+||+. ++.++.+||+.||+++..+|+||+++|+.+          |++|||||||+++|++
T Consensus       150 gi~~L~~~~DtlIvi~Ndkll~~~~~~~~~~Af~~ad~vl~~~v~~i~e~I~~~----------glinvDfaDv~~vm~~  219 (338)
T COG0206         150 GIEELREVVDTLIVIPNDKLLKGKDKTPIAEAFNEADDVLGNAVKGITELITKP----------GLVNVDFADVRTVMKG  219 (338)
T ss_pred             HHHHHHHhCCcEEEEecHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHhccC----------ceEeecHHHHHHHHhc
Confidence            37899999999999999999999 899999999999999999999999999999          9999999999999999


Q ss_pred             cCceeEecccccchhhHHH--HHhhhCCccccc-cccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEEeeec
Q 035901           83 YKEAKIGFGAGSNIKTSIL--QAIYDCPFIGAG-VKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVH  159 (415)
Q Consensus        83 aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~g-I~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIfg~~~  159 (415)
                      .|.|+||||.+.+++|+.+  +.|++||||+.. |+||++ +|+||+|+.||++.|+.++.+.|++.++++.+||||..+
T Consensus       220 ~G~A~mG~g~~~~~~r~~~a~~~A~~~pLl~~~~i~gA~~-~Lv~i~g~~dl~l~ev~~~~~~i~~~i~~~~~vi~G~~~  298 (338)
T COG0206         220 GGFALMGIGRASGEDRAREAVEKALNSPLLDDVDIEGAKG-ALINITGGKDLTLEEVEEALERIQEIIDPDADVIWGAYI  298 (338)
T ss_pred             CCceeEEEeeccchhHHHHHHHHHhcCCcccccccccccc-eEEEEecCCccCHHHHHHHHHHHHHHhCCCceEEEcccc
Confidence            9999999999999999999  999999999955 999999 999999999999999999999999999999999999999


Q ss_pred             CCCCCCCeEEEEEEEecCc
Q 035901          160 EPNLEPDLLVTTVVTLGLV  178 (415)
Q Consensus       160 dp~ledel~VT~Iatl~~~  178 (415)
                      ||+++++++|++|+|=-..
T Consensus       299 d~~~~~~v~v~vi~tg~~~  317 (338)
T COG0206         299 DPGLRDEVRVLVIATGIRS  317 (338)
T ss_pred             CCCCCceEEEEEEEecccc
Confidence            9999999999999986543

>TIGR00065 ftsZ cell division protein FtsZ

Probab=99.98  E-value=4.8e-32  Score=265.36  Aligned_cols=164  Identities=18%  Similarity=0.280  Sum_probs=157.4

Q ss_pred             HHHHHHHhccceEEEecCcccccc-ccccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhh
Q 035901            3 DLAAKLQDHINFYIDIDTDRLLEK-DSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILG   81 (415)
Q Consensus         3 ~lI~kLqe~vd~lIVI~nDrLLe~-D~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~   81 (415)
                      .-+++|++++|++|+||||+|++. +..++++||+.+|++|..+|++|+++|..+          |++|+||+||+++|+
T Consensus       155 ~~l~~L~~~~D~vividNd~L~~~~~~~~i~~af~~~N~iia~~i~~it~~ir~~----------g~iNvDf~dv~~vl~  224 (349)
T TIGR00065       155 EGLERLKQAVDTLIVIPNDKLLEVVPNLPLNDAFKVADDVLVRAVKGISELITKP----------GLINIDFADVRAVMS  224 (349)
T ss_pred             HHHHHHHHhCCEEEEEeCHHHHHhhcCCCHHHHHHHHHHHHHHHHHhHHHhhccC----------CcCcCCHHHHHHHHh
Confidence            357899999999999999999998 569999999999999999999999999999          999999999999999


Q ss_pred             ccCceeEecccccchh---hHHH--HHhhhCCccccc-cccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEE
Q 035901           82 NYKEAKIGFGAGSNIK---TSIL--QAIYDCPFIGAG-VKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIV  155 (415)
Q Consensus        82 ~aGeA~iGfGaG~g~~---rAI~--qaa~~sPlLe~g-I~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIf  155 (415)
                      +.|.|+||||.|.|++   |+.+  +.|++||||+.. |++|++ +|+||+|+.++++.|++++.+.|++.++++.+|||
T Consensus       225 ~~G~a~iG~g~~~g~~~~~r~~~A~~~al~~pLl~~~~i~~A~~-~Lv~i~~~~~l~l~ev~~~~~~i~~~~~~~~~Ii~  303 (349)
T TIGR00065       225 GGGVAMMGIGEALGEDTANRAFEAVRKALSSPLLDVDKISGAKG-ALVHITGGADLTLLEAEEIQEIITSELDQDANIIW  303 (349)
T ss_pred             cCCeEEEEEEEecCCcchHHHHHHHHHHHhCCCcCCcccccccE-EEEEEEcCCCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence            9999999999999999   8888  999999999998 999999 99999999999999999999999999999999999


Q ss_pred             eeecCCCCCCCeEEEEEEEecC
Q 035901          156 SFVHEPNLEPDLLVTTVVTLGL  177 (415)
Q Consensus       156 g~~~dp~ledel~VT~Iatl~~  177 (415)
                      |.++||+++++++||+|||=-.
T Consensus       304 G~~~d~~l~~~i~VtiIatG~~  325 (349)
T TIGR00065       304 GAIIDPNLEDEIRVTIVATGVK  325 (349)
T ss_pred             EEeeCcccCCcEEEEEEEecCC
Confidence            9999999999999999998543

This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis.

>PRK13018 cell division protein FtsZ; Provisional

Probab=99.98  E-value=3.7e-32  Score=269.66  Aligned_cols=165  Identities=14%  Similarity=0.220  Sum_probs=158.5

Q ss_pred             HHHHHHHhccceEEEecCcccccc-ccccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhh
Q 035901            3 DLAAKLQDHINFYIDIDTDRLLEK-DSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILG   81 (415)
Q Consensus         3 ~lI~kLqe~vd~lIVI~nDrLLe~-D~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~   81 (415)
                      .-+++|++++|++||||||+|++. ...++++||+.+|++|..+|++|+++|..+          |++|+||+||+++|+
T Consensus       166 ~gL~~L~e~~D~vividNd~L~~i~~~~~i~~af~~~N~iIa~~I~~It~~i~~~----------G~iN~Df~dv~~vl~  235 (378)
T PRK13018        166 EGIERLREAADTVIVIDNNRLLDIVPNLPIADAFSVADEVIAETVKGITETITKP----------SLINLDFADVKSVMK  235 (378)
T ss_pred             HHHHHHHHhCCEEEEEecHHHHHHHhcCCHHHHHHHHHHHHHHHHHhhhhhcccC----------CceecCHHHHHHHhc
Confidence            458899999999999999999998 789999999999999999999999999999          999999999999999


Q ss_pred             ccCceeEecccccchhhHHH--HHhhhCCccccccccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEEeeec
Q 035901           82 NYKEAKIGFGAGSNIKTSIL--QAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVH  159 (415)
Q Consensus        82 ~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIfg~~~  159 (415)
                      +.|.|.||||.+.|++|+.+  +.|++||||+..|++|++ +|+||+|+.++++.|+.++.+.|++.++.+.+|+||.++
T Consensus       236 ~~G~a~iG~G~a~g~~r~~~Av~~Al~spLL~~di~~A~~-~Lv~I~g~~~l~l~ev~~~~~~i~~~~~~~a~Ii~G~~~  314 (378)
T PRK13018        236 GGGVAMMGVGEAKGQNRAMEAVRAALANPLLDVDYRGAKG-ALVHITGGPDLTLKEANEAASRITEELDPEANIIWGARI  314 (378)
T ss_pred             cCCEEEEEEEEecCCcHHHHHHHHHHhCCCcCCChhhhce-EEEEEECCCCCCHHHHHHHHHHHHHHcCCCCeEEEEEee
Confidence            99999999999999999999  889999999988999999 999999999999999999999999999999999999999


Q ss_pred             CCCCCCCeEEEEEEEecCc
Q 035901          160 EPNLEPDLLVTTVVTLGLV  178 (415)
Q Consensus       160 dp~ledel~VT~Iatl~~~  178 (415)
                      ||+++++|+||+|||=-.+
T Consensus       315 d~~l~~~v~VtvIatG~~~  333 (378)
T PRK13018        315 DPDMEGKVRVMVIMTGVKS  333 (378)
T ss_pred             CCCCCCcEEEEEEEeCCCC
Confidence            9999999999999985443

>cd02201 FtsZ_type1 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes

Probab=99.97  E-value=9.3e-31  Score=249.27  Aligned_cols=160  Identities=22%  Similarity=0.330  Sum_probs=155.2

Q ss_pred             HHHHHHhccceEEEecCcccccc-c-cccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhh
Q 035901            4 LAAKLQDHINFYIDIDTDRLLEK-D-SVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILG   81 (415)
Q Consensus         4 lI~kLqe~vd~lIVI~nDrLLe~-D-~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~   81 (415)
                      -+++|++++|.+|+||||+|++. + ..++++||+.+|+++..+|++|++++..+          |++|+||+||+++|+
T Consensus       139 ~l~~L~~~~d~~ividN~~L~~~~~~~~~i~~af~~~n~~ia~~i~~it~~~~~~----------g~invD~~dv~~vl~  208 (304)
T cd02201         139 GLEELRKHVDTLIVIPNDKLLEVVDKNLPLLEAFKLADDVLAQAVKGISDLITKP----------GLINLDFADVKTVMK  208 (304)
T ss_pred             HHHHHHHhCCEEEEEecHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHhccC----------ccccCCHHHHHHHhc
Confidence            47899999999999999999998 5 69999999999999999999999999999          999999999999999


Q ss_pred             ccCceeEecccccchhhHHH--HHhhhCCccccc-cccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEEeee
Q 035901           82 NYKEAKIGFGAGSNIKTSIL--QAIYDCPFIGAG-VKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFV  158 (415)
Q Consensus        82 ~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~g-I~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIfg~~  158 (415)
                      +.|.|.||||.+.|.+|+.+  +.|++||||+.. |++|++ +|+||+|++++++.|++++.+.+++.++.+.+||||..
T Consensus       209 ~~G~a~ig~g~~~g~~r~~~Av~~Al~~pLl~~~~i~~A~~-~Lv~I~~~~~l~l~e~~~~~~~i~~~~~~~~~ii~G~~  287 (304)
T cd02201         209 NKGVALMGIGEASGENRAIEAAEKAISSPLLEDDSISGAKG-VLVNITGGSDLTLEEVNEAAEIIKEKVDPDANIIFGAT  287 (304)
T ss_pred             cCCeEEEEEEEecCchHHHHHHHHHHhCcCcCCCChhcccE-EEEEEEcCCCCCHHHHHHHHHHHHHHhCCCCeEEEeee
Confidence            99999999999999999888  888999999988 999999 99999999999999999999999999999999999999


Q ss_pred             cCCCCCCCeEEEEEEE
Q 035901          159 HEPNLEPDLLVTTVVT  174 (415)
Q Consensus       159 ~dp~ledel~VT~Iat  174 (415)
                      +||+++++++||+|||
T Consensus       288 ~d~~l~~~v~Vtiiat  303 (304)
T cd02201         288 IDESLEDEIRVTVIAT  303 (304)
T ss_pred             eCCCCCCeEEEEEEEe
Confidence            9999999999999997

FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.

>cd02191 FtsZ FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes

Probab=99.96  E-value=6.5e-29  Score=238.47  Aligned_cols=160  Identities=12%  Similarity=0.136  Sum_probs=154.7

Q ss_pred             HHHHHHhccceEEEecCcccccc-ccccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhhc
Q 035901            4 LAAKLQDHINFYIDIDTDRLLEK-DSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILGN   82 (415)
Q Consensus         4 lI~kLqe~vd~lIVI~nDrLLe~-D~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~~   82 (415)
                      =+++|++++|.+|+||||+|++. ...++++||+.+|+++..+|++|++++.-+          |.+|+||+||+++|++
T Consensus       139 ~l~~L~~~~D~~iv~dN~~L~~~~~~~~~~~af~~~N~~ia~~i~~it~~i~~~----------g~invD~~dv~~~l~~  208 (303)
T cd02191         139 GFQTLVREVDNLMVIPNEKLRQIGEKASLEGAFDHADEVLVRAVGGLFGAIEIE----------GEINVDFADVKNVMDG  208 (303)
T ss_pred             HHHHHHHhCCEEEEEehHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHhhccC----------CcccCCHHHHHHHhcc
Confidence            47899999999999999999999 468999999999999999999999999999          9999999999999999


Q ss_pred             cCceeEecccccchhhHHH--HHhhhCCccccc-cccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEEeeec
Q 035901           83 YKEAKIGFGAGSNIKTSIL--QAIYDCPFIGAG-VKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVH  159 (415)
Q Consensus        83 aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~g-I~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIfg~~~  159 (415)
                      .|.|.||||.+.|++|+.+  +.|+++|||+.. |++|++ +|+||+|+.+|++.|+.++.+.+++.+++..+|+||..+
T Consensus       209 ~G~a~ig~g~~~g~~~~~~a~~~Al~~pll~~~~~~~A~~-~Lv~i~g~~~l~~~e~~~~~~~i~~~~~~~~~i~~G~~~  287 (303)
T cd02191         209 GGVAMVGYGSEDVTNRATEAVRKAALGPLLLPCEIEGAEG-ALLVMAGPPDLNLKEIERVRKWLEEQTGESATVRGGDYI  287 (303)
T ss_pred             CCeEEEEEEEecCchHHHHHHHHHHhCCCCCCCCcccCCE-EEEEEECCCCCCHHHHHHHHHHHHHHcCCCCeEEEeeee
Confidence            9999999999999999999  999999999965 999999 999999999999999999999999999999999999999


Q ss_pred             CCCCCCCeEEEEEEE
Q 035901          160 EPNLEPDLLVTTVVT  174 (415)
Q Consensus       160 dp~ledel~VT~Iat  174 (415)
                      +|+++++++||+|||
T Consensus       288 ~~~~~~~v~v~vi~t  302 (303)
T cd02191         288 DNAPRDKVAVSIVLT  302 (303)
T ss_pred             CCCCCCeEEEEEEec
Confidence            999999999999996

FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.

>cd02202 FtsZ_type2 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes

Probab=99.88  E-value=3.4e-22  Score=195.48  Aligned_cols=156  Identities=13%  Similarity=0.117  Sum_probs=142.1

Q ss_pred             HHHHHHhccceEEEecCccccccccccHHHHHHHhhHHHHHHhhHHHHHh-----hcchhhhhhhhccCccccChHHHHH
Q 035901            4 LAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLS-----SDMHRKLIDIVHSNVKELKVSEIFK   78 (415)
Q Consensus         4 lI~kLqe~vd~lIVI~nDrLLe~D~vTL~EAfk~Annal~~gIkgISdlI-----s~~h~~f~~~~~~glinldfaDVr~   78 (415)
                      =+++|++++|++|++|||+|++.. .++.+||+.+|+++..+|++++..+     ..+          |.+|+||+||++
T Consensus       153 ~l~~L~~~~D~viv~dNd~L~~~~-~~~~~~f~~~N~~Ia~~i~~l~~~~r~~~~~~~----------g~invD~~dv~~  221 (349)
T cd02202         153 SLDALSEEADAIILFDNDAWKRKG-ESVEEAYDRINEEIARRIGLLLRAGEANAGDSV----------GESVLDASEVIN  221 (349)
T ss_pred             HHHHHHHhCCEEEEEehHHHhhhc-cchHHHHHHHHHHHHHHHHHHHHhhhcccCCCC----------CeEeccHHHHHH
Confidence            368999999999999999999984 3678999999999999998888776     447          999999999999


Q ss_pred             HhhccCceeEecccccc-----------------------hhhHHH--HHhhhCCcccc-ccccCCceEEEEeccCc-cc
Q 035901           79 ILGNYKEAKIGFGAGSN-----------------------IKTSIL--QAIYDCPFIGA-GVKELNGMVICVVATSN-II  131 (415)
Q Consensus        79 iL~~aGeA~iGfGaG~g-----------------------~~rAI~--qaa~~sPlLe~-gI~gan~~vlinItgs~-dl  131 (415)
                      +|++.|.+.||||.+.+                       .+|+++  +.|+.+|||.. -|++|++ +|+||+|+. +|
T Consensus       222 ~L~~~G~~~iG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~a~~~a~~~~L~~~~d~~~A~~-~Li~i~g~~~~l  300 (349)
T cd02202         222 TLSGGGFATIGYAREDLETGPSDGKFRLREEDDEVDEKESISRITTLARKAAYGELTVPCDLTSADR-ALIVIAGPPEEL  300 (349)
T ss_pred             HhccCCeEEEEEEEEcccccccccccccccccccccccchhhHHHHHHHHHHcCCCCCCCCcccCcE-EEEEEEeCcccc
Confidence            99999999999999988                       788888  89999999875 5999999 999999998 59


Q ss_pred             CchhhHHHHHHHHHhhcccCCeEEeeecCCCC-CCCeEEEEEEE
Q 035901          132 GNNDLQSFLHTFRQITEYTGETIVSFVHEPNL-EPDLLVTTVVT  174 (415)
Q Consensus       132 ~l~D~~s~l~~~R~atg~~~DIIfg~~~dp~l-edel~VT~Iat  174 (415)
                      ++.|+.++.+.+++.++   +++|+...+|.. .++|+||+|+|
T Consensus       301 ~~~~~~~~~~~i~~~~~---~~~~~~g~~p~~~~~~v~v~vi~t  341 (349)
T cd02202         301 SRKGIEDGRKWLDEEIG---GVEVRSGDYPVPGGDEVAVLVLLS  341 (349)
T ss_pred             CHHHHHHHHHHHHHHcC---CeEEEEEecCCCCCCeEEEEEEEc
Confidence            99999999999999987   789999999988 57999999987

FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.

>PF12327 FtsZ_C: FtsZ family, C-terminal domain; InterPro: IPR024757 The FtsZ family of proteins are involved in polymer formation

Probab=99.86  E-value=1.2e-21  Score=161.08  Aligned_cols=90  Identities=18%  Similarity=0.292  Sum_probs=83.6

Q ss_pred             CceeEecccccchhhHHH--HHhhhCCccccccccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEEeeecCC
Q 035901           84 KEAKIGFGAGSNIKTSIL--QAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEP  161 (415)
Q Consensus        84 GeA~iGfGaG~g~~rAI~--qaa~~sPlLe~gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIfg~~~dp  161 (415)
                      |.|+||||.|.|++|+.+  +.|++||||+..|++|++ +|+||+|+.+++++|++++.+.||+.++.+.+||||.++||
T Consensus         1 G~A~iGiG~a~G~~r~~~Av~~Al~spLl~~~i~~A~~-vLvni~~~~d~~l~ev~~~~~~i~~~~~~~a~ii~G~~id~   79 (95)
T PF12327_consen    1 GRAMIGIGEASGENRAEEAVEQALNSPLLDVDIKGAKG-VLVNITGGPDLSLSEVNEAMEIIREKADPDANIIWGASIDE   79 (95)
T ss_dssp             EEEEEEEEEEESTTHHHHHHHHHHTSTTSTS-GGG-SE-EEEEEEE-TTS-HHHHHHHHHHHHHHSSTTSEEEEEEEE-T
T ss_pred             CeEEEEEEEECCccHHHHHHHHHHhCccccCChHHhce-EEEEEEcCCCCCHHHHHHHHHHHHHHhhcCceEEEEEEECC
Confidence            689999999999999999  999999999999999999 99999999999999999999999999999999999999999


Q ss_pred             CCCCCeEEEEEEE
Q 035901          162 NLEPDLLVTTVVT  174 (415)
Q Consensus       162 ~ledel~VT~Iat  174 (415)
                      +++++++||+|||
T Consensus        80 ~l~d~i~VtiIaT   92 (95)
T PF12327_consen   80 ELEDEIRVTIIAT   92 (95)
T ss_dssp             TGTTEEEEEEEEE
T ss_pred             CCCCeEEEEEEEE
Confidence            9999999999997

FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ is a GTPase, like tubulin []. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea []. This entry represents a domain of FtsZ. In most FtsZ proteins is found in the C terminus, except in some alphaproteobacteria proteins where there is an extension C-terminal domain TIGR03483 from TIGRFAMs.; PDB: 2RHO_B 2RHJ_A 2VXY_A 2RHL_B 2RHH_A 2VAM_A 1W5F_B 2R75_1 2R6R_1 1RQ7_A ....

>smart00865 Tubulin_C Tubulin/FtsZ family, C-terminal domain

Probab=99.23  E-value=8.2e-11  Score=94.23  Aligned_cols=105  Identities=13%  Similarity=0.223  Sum_probs=93.7

Q ss_pred             cccChHHHHHHhhccCceeEecccccchhhHHH--HHhhhCCccccc-cccCCceEEEEeccCcccCchhhHHHHHHHHH
Q 035901           69 KELKVSEIFKILGNYKEAKIGFGAGSNIKTSIL--QAIYDCPFIGAG-VKELNGMVICVVATSNIIGNNDLQSFLHTFRQ  145 (415)
Q Consensus        69 inldfaDVr~iL~~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~g-I~gan~~vlinItgs~dl~l~D~~s~l~~~R~  145 (415)
                      +|+||+|++++|..+|.+.+|||-+.|.+|+.+  +.+..+|||+.. +..|.+ ++.+++++.++++.|+..++..+++
T Consensus         1 in~D~~dl~~~L~p~~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~a~~-~~~~l~~~~~~~~~ev~~~~~~i~~   79 (120)
T smart00865        1 INVDFADVKTVMVPMGFAMMGIGPASGENRALEAAELAISSPLLEPSNIMGAKG-VLVNITGGPDLTLKEVNEAMERIRE   79 (120)
T ss_pred             CCCchHHHHHhccCCCeEEEEEEEecCCChHHHHHHHHHhCcccCCcchhhcCc-eEEEEEcCCCCCHHHHHHHHHHHHH
Confidence            589999999999999999999999988777777  899999999976 999998 6669999999999999999999999


Q ss_pred             hhcccCCeEEeeecCCCC-CCCeEEEEEEE
Q 035901          146 ITEYTGETIVSFVHEPNL-EPDLLVTTVVT  174 (415)
Q Consensus       146 atg~~~DIIfg~~~dp~l-edel~VT~Iat  174 (415)
                      -.+....+.||...++.+ ...+.|+.|+|
T Consensus        80 ~~~~~~~v~w~~~~~~~~~~~~~~i~ni~t  109 (120)
T smart00865       80 KADPDAFIIWGPVIDEELGGDEIRVTVIAT  109 (120)
T ss_pred             hcCCCceEEEccccCCcCCCCcEEEEEEec
Confidence            876667789999899999 77888887665

This domain is found in the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. These proteins are GTPases and are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea. This is the C-terminal domain.

>cd00286 Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation

Probab=98.16  E-value=2.4e-06  Score=82.23  Aligned_cols=157  Identities=10%  Similarity=0.074  Sum_probs=120.0

Q ss_pred             HHHHHhccceEEEecCccccccc--cc-cHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHh-
Q 035901            5 AAKLQDHINFYIDIDTDRLLEKD--SV-TLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKIL-   80 (415)
Q Consensus         5 I~kLqe~vd~lIVI~nDrLLe~D--~v-TL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL-   80 (415)
                      +..|.+++|..|++||++|.+.-  .. ....+|...|+++-..|.+++..+.-+          |.+|+|+.++...| 
T Consensus       147 l~~L~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~r~~----------g~~n~d~~~~~~~l~  216 (328)
T cd00286         147 LHTLTEHSDCLVVIDNEALFDICPRPLHIDKPTFDHINELLATALSSLTTPLRFD----------GSLNVDLRELSENLV  216 (328)
T ss_pred             HHHHHhcCCeEEEecchhHHHHhHHhcCCCCCCHHHHHHHHHhhccccccccccC----------ccccchHHHHhhhcC
Confidence            57899999999999999999872  22 345799999999999999999999888          99999997777655 


Q ss_pred             --hccCceeEecccccch------hhHHH---HHhhhCCccccc----cccCCceEEEEeccCcccCchhhHHHHHHHHH
Q 035901           81 --GNYKEAKIGFGAGSNI------KTSIL---QAIYDCPFIGAG----VKELNGMVICVVATSNIIGNNDLQSFLHTFRQ  145 (415)
Q Consensus        81 --~~aGeA~iGfGaG~g~------~rAI~---qaa~~sPlLe~g----I~gan~~vlinItgs~dl~l~D~~s~l~~~R~  145 (415)
                        ...+-..+||+-..+.      ...++   +.++++++....    ...+-+ +++.+.|.  .+..|+......+++
T Consensus       217 p~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~rG~--~~~~~v~~~~~~l~~  293 (328)
T cd00286         217 PFPRLHFLMVGYAPLDSEGSATPTTLRVAELVRQALRSKNQMVVCDPTHGGYIA-ALLLVRGP--VSPSEVREGIARVAP  293 (328)
T ss_pred             CCCCceeeccccCccccccccccccCCHHHHHHHHhCCCCeeeccCCCccchHH-HHHHHhCC--CChHHHHHHHHHHHH
Confidence              6777888888876652      22222   677788876632    444455 55666664  488899888888887


Q ss_pred             hhc----ccCCeEEeeecCCCC-CCCeEEEEEEE
Q 035901          146 ITE----YTGETIVSFVHEPNL-EPDLLVTTVVT  174 (415)
Q Consensus       146 atg----~~~DIIfg~~~dp~l-edel~VT~Iat  174 (415)
                      ...    ....+.+|....|.. +.+..|++|++
T Consensus       294 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~N  327 (328)
T cd00286         294 RTSHLSWSPPGIKVGVSPTPPASEHKVSALLLSN  327 (328)
T ss_pred             hCCcCCcCCCCEeEeecCCCCCCCcCeEEEEecc
Confidence            654    255788999988887 88888888764

Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts.

>cd06059 Tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa

Probab=95.18  E-value=0.0086  Score=59.73  Aligned_cols=74  Identities=11%  Similarity=0.154  Sum_probs=63.3

Q ss_pred             HHHHHhccceEEEecCcccccc-c-cccH-HHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhh
Q 035901            5 AAKLQDHINFYIDIDTDRLLEK-D-SVTL-DEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILG   81 (415)
Q Consensus         5 I~kLqe~vd~lIVI~nDrLLe~-D-~vTL-~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~   81 (415)
                      +..|.+++|..|+++||.|.+. . ...+ ..+|...|+++-..|.+|+..+.-+          |..|+|+.|+.+.|-
T Consensus       148 l~~L~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~iia~~l~~it~~~r~~----------g~~n~d~~~i~~~Lv  217 (382)
T cd06059         148 LNHLLENSDSVILFDNEALYNILTRQLDIDEPSFDDLNNIIAQIISSITASLRFP----------GYLNFDLRKLATNLV  217 (382)
T ss_pred             HHHHHhcCCeeEEeehHHHHHHHHHhcCCCCCChHHHHHHHHHhhcccccccccC----------CCcCCCHHHHhhhcC
Confidence            5689999999999999999987 3 3233 5799999999999999999999888          999999999999887


Q ss_pred             ccCceeE
Q 035901           82 NYKEAKI   88 (415)
Q Consensus        82 ~aGeA~i   88 (415)
                      -+..-.+
T Consensus       218 P~p~~~f  224 (382)
T cd06059         218 PFPRLHF  224 (382)
T ss_pred             CCCCcee
Confidence            7666443

The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-termi

>cd02190 epsilon_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa

Probab=94.92  E-value=0.015  Score=58.64  Aligned_cols=60  Identities=15%  Similarity=0.180  Sum_probs=54.3

Q ss_pred             HHHHHhccceEEEecCccccccccccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhhcc
Q 035901            5 AAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILGNY   83 (415)
Q Consensus         5 I~kLqe~vd~lIVI~nDrLLe~D~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~~a   83 (415)
                      +.+|.+++|+.|++|||.|.         +|...|+++...|.+++..+.-+          |..|+|+.|+.+-|=-+
T Consensus       157 l~~l~~~~d~~i~~~N~~l~---------~~~~~N~~ia~~i~~~t~~~rf~----------g~~n~d~~~i~~nLvP~  216 (379)
T cd02190         157 LRELIEHADCVLPIENQALV---------PFDAMNSIVANLLLNLTSSMRFE----------GSLNVDLNEITMNLVPF  216 (379)
T ss_pred             HHHHHHhCCeeEEeccHHHH---------HHHHHHHHHHhhhcCccceeecc----------cccccchhhhccccccC
Confidence            57899999999999999998         89999999999999999888878          99999999998876543

The epsilon-tubulins which are widespread but not ubiquitous among eukaryotes play a role in basal body/centriole morphogenesis.

>PTZ00387 epsilon tubulin; Provisional

Probab=93.84  E-value=0.03  Score=58.31  Aligned_cols=71  Identities=18%  Similarity=0.227  Sum_probs=59.6

Q ss_pred             HHHHHhccceEEEecCcccccc-c-cccHH----------------------------HHHHHhhHHHHHHhhHHHHHhh
Q 035901            5 AAKLQDHINFYIDIDTDRLLEK-D-SVTLD----------------------------EALKTANNAVFLAVNAISTLSS   54 (415)
Q Consensus         5 I~kLqe~vd~lIVI~nDrLLe~-D-~vTL~----------------------------EAfk~Annal~~gIkgISdlIs   54 (415)
                      +..|.+++|.+|+++||.|.+. + ...+.                            .+|...|+++...+.+++..+.
T Consensus       189 l~~l~e~~d~~i~~dN~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~iIa~~l~~~t~~~R  268 (465)
T PTZ00387        189 LRELIEHADCVLPLDNDALANIADSALSRKKKKLAKGNIKRGPQPHKYSVAKPTETKKLPYDKMNNIVAQLLSNLTSSMR  268 (465)
T ss_pred             HHHHHhhCCeEEEeehHHHHHHHHhhcCccccccccccccccccccccccccccccccccHHHHHHHHHhhhccccceee
Confidence            5789999999999999999987 4 33333                            6899999999999999998887


Q ss_pred             cchhhhhhhhccCccccChHHHHHHhhccCc
Q 035901           55 DMHRKLIDIVHSNVKELKVSEIFKILGNYKE   85 (415)
Q Consensus        55 ~~h~~f~~~~~~glinldfaDVr~iL~~aGe   85 (415)
                      -+          |.+|+|+.|+.+-|=-+-.
T Consensus       269 f~----------g~~n~dl~~i~~nLvP~P~  289 (465)
T PTZ00387        269 FE----------GSLNVDINEITTNLVPYPR  289 (465)
T ss_pred             cC----------CccCCCHHHHHhhcCCCCC
Confidence            77          9999999999887755443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	415
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 4e-06
 Identities = 31/191 (16%), Positives = 69/191 (36%), Gaps = 47/191 (24%)

Query: 22  RLLEKD---------SVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNV-KEL 71
            L+EK          S+ L+  +K  N                +HR ++D  H N+ K  
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEY-------------ALHRSIVD--HYNIPKTF 459

Query: 72  KVSEIFKI-LGNYKEAKIGF---GAGSNIKTSILQAIY-DCPFIGAGVKELNGMVICVVA 126
              ++    L  Y  + IG          + ++ + ++ D  F+   ++  +       +
Sbjct: 460 DSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGS 519

Query: 127 TSNIIGNNDLQSFL-HTFRQITEYTG--ETIVSFVHEPNLEPDLLV---TTVVTLGL--- 177
             N +    L+ +  +      +Y      I+ F+  P +E +L+    T ++ + L   
Sbjct: 520 ILNTL--QQLKFYKPYICDNDPKYERLVNAILDFL--PKIEENLICSKYTDLLRIALMAE 575

Query: 178 ----VEQASRK 184
                E+A ++
Sbjct: 576 DEAIFEEAHKQ 586

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 2e-05
 Identities = 48/313 (15%), Positives = 95/313 (30%), Gaps = 90/313 (28%)

Query: 2   KDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDM----- 56
           K L  K       Y+D     L         E L T        ++ I+    D      
Sbjct: 304 KSLLLK-------YLDCRPQDLPR-------EVLTTNP----RRLSIIAESIRDGLATWD 345

Query: 57  ------HRKLIDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAI------ 104
                   KL  I+ S++  L+ +E  K    +    + F   ++I T +L  I      
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYRK---MFDRLSV-FPPSAHIPTILLSLIWFDVIK 401

Query: 105 YDCPFIGAGVKELN--GMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPN 162
            D   +   V +L+   +V             +    + +     +   E   + +H   
Sbjct: 402 SDVMVV---VNKLHKYSLVEK--------QPKESTISIPSIYLELKVKLENEYA-LHRSI 449

Query: 163 LEPDLLVTTVVTLGLVEQASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNAC 222
           ++   +  T  +  L+     +   +S + HH         +N +        + F    
Sbjct: 450 VDHYNIPKTFDSDDLIPPYLDQY-FYSHIGHHL--------KNIEHPERM---TLFRMVF 497

Query: 223 VSEVIGPPDTSEIENKISNESVSEGFYNYSNDAPTLLTDYNNIDASSRSGQSEAEFYESR 282
           +       D   +E KI ++S +   +N S      L                 +FY+  
Sbjct: 498 L-------DFRFLEQKIRHDSTA---WNASGSILNTLQQL--------------KFYKPY 533

Query: 283 -TEPSNLYDQIVE 294
             +    Y+++V 
Sbjct: 534 ICDNDPKYERLVN 546

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	415
4dxd_A	396	Cell division protein FTSZ; rossmann fold, GTPase,	100.0
1ofu_A	320	FTSZ, cell division protein FTSZ; bacterial cell d	99.96
2vxy_A	382	FTSZ, cell division protein FTSZ; GTP-binding, nuc	99.96
2vaw_A	394	FTSZ, cell division protein FTSZ; bacterial cell d	99.96
1w5f_A	353	Cell division protein FTSZ; complete proteome, GTP	99.96
2vap_A	364	FTSZ, cell division protein FTSZ homolog 1; polyme	99.95
1rq2_A	382	Cell division protein FTSZ; cell cycle, tubulin, G	99.95
2r75_1	338	Cell division protein FTSZ; GTPase, tubulin-like,	99.95
4ei7_A	389	Plasmid replication protein REPX; GTP hydrolase, p	99.86
3v3t_A	360	Cell division GTPase FTSZ, diverged; TUBZ, tubulin	99.71
3m89_A	427	FTSZ/tubulin-related protein; partition, TUBZ, GTP	99.62
2btq_B	426	Tubulin btubb; structural protein, cytoskeletal pr	98.47
2bto_A	473	Tubulin btuba; bacterial tubulin, polymerization,	98.3
3cb2_A	475	Gamma-1-tubulin, tubulin gamma-1 chain; lattice, m	98.1
3ryc_A	451	Tubulin alpha chain; alpha-tubulin, beta-tubulin,	95.68
3ryc_B	445	Tubulin beta chain; alpha-tubulin, beta-tubulin, G	95.55

>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*

Probab=100.00  E-value=1.4e-34  Score=287.56  Aligned_cols=165  Identities=21%  Similarity=0.275  Sum_probs=159.1

Q ss_pred             HHHHHHhccceEEEecCcccccc-c-cccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhh
Q 035901            4 LAAKLQDHINFYIDIDTDRLLEK-D-SVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILG   81 (415)
Q Consensus         4 lI~kLqe~vd~lIVI~nDrLLe~-D-~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~   81 (415)
                      -+.+|++++|.+||||||+|++. + ..++.+||+.||++|..+|++|+++|.-+          |++|+||+||+++|.
T Consensus       156 gl~~L~e~vD~vIvIdNeaL~~I~~~~l~i~~af~~aN~ll~q~VsgIT~~irfp----------G~iNvDfaDv~t~m~  225 (396)
T 4dxd_A          156 GVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVS----------GEVNLDFADVKTIMS  225 (396)
T ss_dssp             HHHHHHHHSSEEEEEEGGGGGGTCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSC----------CTBCCCHHHHHHHHT
T ss_pred             HHHHHHhhCCEEEEEcCHHHHHhhcccccHHHHHHHHHHHHHHHHHhhhhhhccC----------CcccCCHHHHHHHhh
Confidence            47889999999999999999999 5 79999999999999999999999999999          999999999999999


Q ss_pred             ccCceeEecccccchhhHHH--HHhhhCCccccccccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEEeeec
Q 035901           82 NYKEAKIGFGAGSNIKTSIL--QAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVH  159 (415)
Q Consensus        82 ~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIfg~~~  159 (415)
                      ++|.|+||+|.+.|++||.+  +.|++||||+..|+||++ ||+||+|+.++++.|++++.+.|++.++++++||||.++
T Consensus       226 ~~G~A~mG~G~a~G~~ra~~A~~~Ai~sPLL~~~i~gAkg-vLvnItgg~dl~l~Ev~~~~~~i~~~~~~~a~ii~G~~~  304 (396)
T 4dxd_A          226 NQGSALMGIGVSSGENRAVEAAKKAISSPLLETSIVGAQG-VLMNITGGESLSLFEAQEAADIVQDAADEDVNMIFGTVI  304 (396)
T ss_dssp             TCEECEEEEEEEESTTHHHHHHHHHHCCSSCSSCSTTCCE-EEEEEEECTTCCHHHHHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred             cCCeEEEEEEeccCCchHHHHHHHHHhCccccCChhhhcc-eEEEEEcCCCCCHHHHHHHHHHHHHHcCCCCeEEEeeee
Confidence            99999999999999999999  999999999999999999 999999999999999999999999999999999999999


Q ss_pred             CCCCCCCeEEEEEEEecCcc
Q 035901          160 EPNLEPDLLVTTVVTLGLVE  179 (415)
Q Consensus       160 dp~ledel~VT~Iatl~~~~  179 (415)
                      ||+++++|+||+|||=-...
T Consensus       305 d~~l~~~i~VtviaTG~~~~  324 (396)
T 4dxd_A          305 NPELQDEIVVTVIATGFDDK  324 (396)
T ss_dssp             CTTSTTEEEEEEEEECCCCC
T ss_pred             CCCCCCcEEEEEEEecCCCC
Confidence            99999999999999865544

>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1

Probab=99.96  E-value=2e-29  Score=242.12  Aligned_cols=160  Identities=17%  Similarity=0.246  Sum_probs=154.6

Q ss_pred             HHHHHHhccceEEEecCcccccc-c-cccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhh
Q 035901            4 LAAKLQDHINFYIDIDTDRLLEK-D-SVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILG   81 (415)
Q Consensus         4 lI~kLqe~vd~lIVI~nDrLLe~-D-~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~   81 (415)
                      -+++|++++|.+||||||+|++. + ..++.+||+.||++|..+|+||+++|.-+          |++|+||+||+++|.
T Consensus       150 ~l~~L~e~~D~~ividNe~L~~i~~~~l~i~~af~~~n~~l~~~v~~it~~ir~p----------G~iNvD~~dv~t~l~  219 (320)
T 1ofu_A          150 GIRALAESVDSLITIPNEKLLTILGKDASLLAAFAKADDVLAGAVRGISDIIKRP----------GMINVDFADVKTVMS  219 (320)
T ss_dssp             HHHHHHTTCSEEEEEEHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSC----------SSSSCCHHHHHHHHT
T ss_pred             HHHHHHHhCCEEEEEecHHhhhhhhcCCCHHHHHHHHHHHHHHHhcccHhhcccC----------CceeecHHHHHHhcc
Confidence            47889999999999999999999 5 89999999999999999999999999999          999999999999999


Q ss_pred             ccCceeEecccccchhhHHH--HHhhhCCccc-cccccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEEeee
Q 035901           82 NYKEAKIGFGAGSNIKTSIL--QAIYDCPFIG-AGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFV  158 (415)
Q Consensus        82 ~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe-~gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIfg~~  158 (415)
                      ..|.++||+|.++|++|+.+  +.|++||||+ ..+++|++ ++|||+++.++++.|++++.+.||+.++.+.+||||..
T Consensus       220 ~~g~~~~g~g~a~g~~~~~~a~~~a~~~~ll~~~d~~~ak~-~l~~i~~~~d~~~~ev~~a~~~i~~~~~~~~~ii~G~~  298 (320)
T 1ofu_A          220 EMGMAMMGTGCASGPNRAREATEAAIRNPLLEDVNLQGARG-ILVNITAGPDLSLGEYSDVGNIIEQFASEHATVKVGTV  298 (320)
T ss_dssp             TCEEEEEEEEEEESTTHHHHHHHHHHTCGGGTTCCGGGCSE-EEEEEEECTTCCHHHHHHHHHHHHHHSCTTSEEEEEEE
T ss_pred             CCCeeEEEEEecCcccHHHHHHHHHHhccccccCCccccce-EEEEEEeCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEE
Confidence            99999999999999999988  8899999998 67999999 89999999999999999999999999999999999999


Q ss_pred             cCCCCCCCeEEEEEEE
Q 035901          159 HEPNLEPDLLVTTVVT  174 (415)
Q Consensus       159 ~dp~ledel~VT~Iat  174 (415)
                      +||.++++++||+|||
T Consensus       299 ~~~~~~~~v~vtviat  314 (320)
T 1ofu_A          299 IDADMRDELHVTVVAT  314 (320)
T ss_dssp             ECTTCCSEEEEEEEEE
T ss_pred             cCCCCCCeEEEEEEEe
Confidence            9999999999999998

>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*

Probab=99.96  E-value=6.8e-29  Score=244.90  Aligned_cols=163  Identities=20%  Similarity=0.295  Sum_probs=156.3

Q ss_pred             HHHHHHhccceEEEecCcccccc-c-cccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhh
Q 035901            4 LAAKLQDHINFYIDIDTDRLLEK-D-SVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILG   81 (415)
Q Consensus         4 lI~kLqe~vd~lIVI~nDrLLe~-D-~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~   81 (415)
                      -+++|++++|.+||||||+|++. + ..++.+||+.||++|..+|+||+++|.-+          |++|+||+||+++|.
T Consensus       150 ~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~~~N~ll~~~vsgIt~~ir~p----------G~iNvD~~dv~t~L~  219 (382)
T 2vxy_A          150 GISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVLRQGVQGISDLIATP----------GLINLDFADVKTIMS  219 (382)
T ss_dssp             HHHHHHHHCSEEEEEEHHHHHHHSCTTCCHHHHHHHHHHHHHHHHHHHHTTTSSC----------CTTCCCHHHHHHHTT
T ss_pred             HHHHHHHhCCEEEEEccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCC----------CccccCHHHHHHhcc
Confidence            47899999999999999999998 5 79999999999999999999999999999          999999999999999


Q ss_pred             ccCceeEecccccchhhHHH--HHhhhCCccccccccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEEeeec
Q 035901           82 NYKEAKIGFGAGSNIKTSIL--QAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVH  159 (415)
Q Consensus        82 ~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIfg~~~  159 (415)
                      ..|.++||+|.++|++|+.+  +.|++||||+..+++|++ ++|||+|+.++++.|++++...|++..+.+.+|+||..+
T Consensus       220 ~~g~a~~g~g~a~g~~r~~ea~~~a~~s~ll~~d~~~ak~-~l~~i~gg~dl~~~ev~~a~~~I~~~~~~~a~ii~G~~~  298 (382)
T 2vxy_A          220 NKGSALMGIGIATGENRAAEAAKKAISSPLLEAAIDGAQG-VLMNITGGTNLSLYEVQEAADIVASASDQDVNMIFGSVI  298 (382)
T ss_dssp             CSSEEEEEEEEEESTTHHHHHHHHHHTCTTSCSCGGGCSE-EEEEEEECTTCCHHHHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             CCCceEEEEEecccccHHHHHHHHHHhCcCcCCChhhcce-eEEEEEeCCCCCHHHHHHHHHHHHHhcCCCCCEEEEeec
Confidence            99999999999999999988  889999999988999999 899999999999999999999999999999999999999


Q ss_pred             CCCCCCCeEEEEEEEecC
Q 035901          160 EPNLEPDLLVTTVVTLGL  177 (415)
Q Consensus       160 dp~ledel~VT~Iatl~~  177 (415)
                      ||.++++++||+|+|=-.
T Consensus       299 d~~~~~~v~VtvIatG~~  316 (382)
T 2vxy_A          299 NENLKDEIVVTVIATGFI  316 (382)
T ss_dssp             CTTCSSEEEEEEEEEEEC
T ss_pred             CCCCCCeEEEEEEEcCCC
Confidence            999999999999998543

>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1

Probab=99.96  E-value=1.7e-28  Score=242.96  Aligned_cols=162  Identities=17%  Similarity=0.224  Sum_probs=155.3

Q ss_pred             HHHHHHhccceEEEecCcccccc-c-cccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhh
Q 035901            4 LAAKLQDHINFYIDIDTDRLLEK-D-SVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILG   81 (415)
Q Consensus         4 lI~kLqe~vd~lIVI~nDrLLe~-D-~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~   81 (415)
                      -+++|++++|.+||||||+|++. + ..++.+||+.||++|..+|++|+++|.-+          |++|+||+||+++|.
T Consensus       150 ~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~~~N~li~~~v~~it~~ir~p----------G~iNvD~~dv~t~L~  219 (394)
T 2vaw_A          150 GIRALAESVDSLITIPNEKLLTILGKDASLLAAFAKADDVLAGAVRGISDIIKRP----------GMINVDFADVKTVMS  219 (394)
T ss_dssp             HHHHHHTTCSEEEEEEHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSB----------CSSCCCHHHHHHHHT
T ss_pred             HHHHHHHhCCEEEEEecHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCC----------CcccccHHHHHHhcc
Confidence            47899999999999999999998 5 89999999999999999999999999999          999999999999999


Q ss_pred             ccCceeEecccccchhhHHH--HHhhhCCcccc-ccccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEEeee
Q 035901           82 NYKEAKIGFGAGSNIKTSIL--QAIYDCPFIGA-GVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFV  158 (415)
Q Consensus        82 ~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~-gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIfg~~  158 (415)
                      ..|.++||+|.+.|++|+.+  +.|++||||+. .+++|++ ++|||+++.++++.|++++++.|++.++.+.+|+||..
T Consensus       220 ~~g~a~~g~g~a~g~~rv~ea~~~A~~spLl~~~d~~~ak~-~lv~i~~~~dl~~~ev~~a~~~I~~~~~~~a~i~~G~~  298 (394)
T 2vaw_A          220 EMGMAMMGTGCASGPNRAREATEAAIRNPLLEDVNLQGARG-ILVNITAGPDLSLGEYSDVGNIIEQFASEHATVKVGTV  298 (394)
T ss_dssp             TTCCBEEEEEEECSTTHHHHHHHHHHTCGGGTTCCTTTCSE-EEEEEEECTTCCHHHHHHHHHHHHHHSCTTSEEEEEEE
T ss_pred             CCCceeEEEEeccccchHHHHHHHHHhcCccCCCCccccce-eEEEEEeCCCCCHHHHHHHHHHHHHhcCCCCCEEEEee
Confidence            99999999999999999998  88999999996 6999999 89999999999999999999999999998999999999


Q ss_pred             cCCCCCCCeEEEEEEEec
Q 035901          159 HEPNLEPDLLVTTVVTLG  176 (415)
Q Consensus       159 ~dp~ledel~VT~Iatl~  176 (415)
                      ++|.++++++||+|+|=-
T Consensus       299 ~d~~~~~~v~VtvIatG~  316 (394)
T 2vaw_A          299 IDADMRDELHVTVVATGL  316 (394)
T ss_dssp             ECSSCCSCEEEEEEEECC
T ss_pred             cCCCCCCeEEEEEEEccC
Confidence            999999999999999843

>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1

Probab=99.96  E-value=1.3e-28  Score=240.16  Aligned_cols=162  Identities=17%  Similarity=0.277  Sum_probs=155.6

Q ss_pred             HHHHHHhccceEEEecCcccccc-c-cccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCcccc--ChHHHHHH
Q 035901            4 LAAKLQDHINFYIDIDTDRLLEK-D-SVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKEL--KVSEIFKI   79 (415)
Q Consensus         4 lI~kLqe~vd~lIVI~nDrLLe~-D-~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinl--dfaDVr~i   79 (415)
                      -+++|++++|.+||||||+|++. + ..++.+||+.||++|..+|++|+++|.-+          |++|+  ||+||+++
T Consensus       160 ~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~~~N~ll~~~v~~it~~ir~p----------G~iNv~~D~~dv~t~  229 (353)
T 1w5f_A          160 GLKKLRKHVDTLIKISNNKLMEELPRDVKIKDAFLKADETLHQGVKGISELITKR----------GYIRLTSRFARIESV  229 (353)
T ss_dssp             HHHHHHHTCSEEEEEEHHHHHTTSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHCC----------CCCCHHHHHHHHHHH
T ss_pred             HHHHHHhhCCEEEEEecHHHHhhhcccCCHHHHHHHHHHHHHHHhcCchhhccCC----------cccccccCHHHHHHh
Confidence            47899999999999999999999 5 89999999999999999999999999999          99999  99999999


Q ss_pred             hhccCceeEecccccchhhHHH--HHhhhCCccccccccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEEee
Q 035901           80 LGNYKEAKIGFGAGSNIKTSIL--QAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSF  157 (415)
Q Consensus        80 L~~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIfg~  157 (415)
                      |...|.++||+|.++|++|+.+  +.|++||||+..+++|++ ++|||+++.++++.|++++.+.|++.++.+.+|+||.
T Consensus       230 L~~~g~a~~g~g~a~g~~~v~ea~~~a~~~~ll~~d~~~ak~-~l~~i~~~~dl~~~ev~~a~~~I~~~~~~~~~i~~G~  308 (353)
T 1w5f_A          230 MKDAGAAILGIGVGKGEHRAREAAKKAMESKLIEHPVENASS-IVFNITAPSNIRMEEVHEAAMIIRQNSSEDADVKFGL  308 (353)
T ss_dssp             HTTCEEEEEEEEEEESTTHHHHHHHHHHTCTTCCSCGGGCSE-EEEEEEECTTCCHHHHHHHHHHHHTTSCTTSEEEEEE
T ss_pred             ccCCCeeEEEEeecCCcchHHHHHHHHHhCCCcCCChhhcce-eEEEEEeCCCCCHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence            9999999999999999999988  888899999988999999 9999999999999999999999999999999999999


Q ss_pred             ecCCCCCC-CeEEEEEEEec
Q 035901          158 VHEPNLEP-DLLVTTVVTLG  176 (415)
Q Consensus       158 ~~dp~led-el~VT~Iatl~  176 (415)
                      .+||.+++ +++||+|+|=-
T Consensus       309 ~~d~~~~~~~v~vtviatg~  328 (353)
T 1w5f_A          309 IFDDEVPDDEIRVIFIATRF  328 (353)
T ss_dssp             EECTTSCTTEEEEEEEEECC
T ss_pred             EeCCCCCCCeEEEEEEEeCC
Confidence            99999999 99999999843

>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*

Probab=99.95  E-value=4.8e-28  Score=237.44  Aligned_cols=165  Identities=18%  Similarity=0.228  Sum_probs=157.3

Q ss_pred             HHHHHHhccceEEEecCcccccc-ccccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhhc
Q 035901            4 LAAKLQDHINFYIDIDTDRLLEK-DSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILGN   82 (415)
Q Consensus         4 lI~kLqe~vd~lIVI~nDrLLe~-D~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~~   82 (415)
                      -+++|++++|.+|+||||+|++. +..++.+||+.||++|..+|++|+++|.-+          |++|+||+||+++|..
T Consensus       176 ~l~~L~e~~D~~ividNeaL~~i~~~l~i~~af~~~N~li~~~v~~it~~ir~p----------G~iNvD~~dv~t~L~~  245 (364)
T 2vap_A          176 GLERLKQHTDTLVVIPNEKLFEIVPNMPLKLAFKVADEVLINAVKGLVELITKD----------GLINVDFADVKAVMNN  245 (364)
T ss_dssp             HHHHHHTTCSEEEEEEGGGHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHSC----------CSBCCCHHHHHHHHTT
T ss_pred             HHHHHHHhCCeEEEEcHHHHHHHHccCChhhhhhhHHHHHHHHHhhhhHHhhcC----------CceeccHHHHHHhccC
Confidence            47899999999999999999998 678889999999999999999999999999          9999999999999999


Q ss_pred             cCceeEecccccchhhHHH--HHhhhCCccccccccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEEeeecC
Q 035901           83 YKEAKIGFGAGSNIKTSIL--QAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHE  160 (415)
Q Consensus        83 aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIfg~~~d  160 (415)
                      .|.++||+|.+.|++|+.+  +.|+++|||+..+++|++ ++|||+++.++++.|++++.+.|++.++++.+|+||.+++
T Consensus       246 ~g~a~~g~g~a~g~~r~~ea~~~a~~~~ll~~d~~~ak~-~l~~i~~~~dl~~~ev~~a~~~I~~~~~~~a~ii~G~~~~  324 (364)
T 2vap_A          246 GGLAMIGIGESDSEKRAKEAVSMALNSPLLDVDIDGATG-ALIHVMGPEDLTLEEAREVVATVSSRLDPNATIIWGATID  324 (364)
T ss_dssp             CEEEEEEEEEECSTTHHHHHHHHHHTCTTCCSCGGGCCE-EEEEEEECTTCCHHHHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred             CCeeEEEEEecCCcchHHHHHHHHHhCcCcCcChhhcce-EEEEEEeCCCCCHHHHHHHHHHHHHhcCCCCCEEEEEEec
Confidence            9999999999999999988  888899999988999999 9999999999999999999999999999999999999999


Q ss_pred             CCCCCCeEEEEEEEecCcc
Q 035901          161 PNLEPDLLVTTVVTLGLVE  179 (415)
Q Consensus       161 p~ledel~VT~Iatl~~~~  179 (415)
                      |.++++++||+|||=-.++
T Consensus       325 ~~~~~~v~VtvIatG~~~~  343 (364)
T 2vap_A          325 ENLENTVRVLLVITGVQSR  343 (364)
T ss_dssp             TTCSSCEEEEEEEECCGGG
T ss_pred             CCCCCeEEEEEEEeCCCCC
Confidence            9999999999999855443

>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*

Probab=99.95  E-value=2.9e-28  Score=240.38  Aligned_cols=164  Identities=20%  Similarity=0.289  Sum_probs=155.8

Q ss_pred             HHHHHHhccceEEEecCcccccc-c-cccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhh
Q 035901            4 LAAKLQDHINFYIDIDTDRLLEK-D-SVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILG   81 (415)
Q Consensus         4 lI~kLqe~vd~lIVI~nDrLLe~-D-~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~   81 (415)
                      -+++|++++|.+|+||||+|++. + ..++.+||+.||++|..+|++|+++|.-+          |++|+||+||+++|.
T Consensus       150 ~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~~~N~li~~~vs~it~~ir~p----------G~iNvD~~dv~t~L~  219 (382)
T 1rq2_A          150 GIAALRESCDTLIVIPNDRLLQMGDAAVSLMDAFRSADEVLLNGVQGITDLITTP----------GLINVDFADVKGIMS  219 (382)
T ss_dssp             HHHHHHHHCSEEEEEEHHHHTTSSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSB----------CSSCCCHHHHHHHHT
T ss_pred             HHHHHHHhCCEEEEEechhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHccC----------CceeccHHHHHHhcc
Confidence            47889999999999999999998 5 78999999999999999999999999999          999999999999999


Q ss_pred             ccCceeEecccccchhhHHH--HHhhhCCccccccccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEEeeec
Q 035901           82 NYKEAKIGFGAGSNIKTSIL--QAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVH  159 (415)
Q Consensus        82 ~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIfg~~~  159 (415)
                      ..|.++||+|.++|++|+.+  +.|++||||+..+++|++ ++|||+|+.++++.|++++...|++.++.+.+||||..+
T Consensus       220 ~~g~a~~g~g~a~g~~r~~ea~~~a~~s~ll~~d~~~ak~-~l~~i~gg~dl~~~ev~~a~~~I~~~~~~~a~ii~G~~~  298 (382)
T 1rq2_A          220 GAGTALMGIGSARGEGRSLKAAEIAINSPLLEASMEGAQG-VLMSIAGGSDLGLFEINEAASLVQDAAHPDANIIFGTVI  298 (382)
T ss_dssp             TCEEEEEEEEEEESTTHHHHHHHHHHTCGGGTTCGGGCSE-EEEEEEECTTCCHHHHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             CCCeeEEEeeecccccHHHHHHHHHHhCcCcCCChhchhe-EEEEEEeCCCCCHHHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence            99999999999999999988  888999999988999999 899999999999999999999999999999999999999


Q ss_pred             CCCCCCCeEEEEEEEecCc
Q 035901          160 EPNLEPDLLVTTVVTLGLV  178 (415)
Q Consensus       160 dp~ledel~VT~Iatl~~~  178 (415)
                      ||.++++++||+|+|=-..
T Consensus       299 d~~~~~~v~VtvIatG~~~  317 (382)
T 1rq2_A          299 DDSLGDEVRVTVIAAGFDV  317 (382)
T ss_dssp             CGGGTTEEEEEEEEECC--
T ss_pred             CCCCCCeEEEEEEEccCCc
Confidence            9999999999999995433

>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*

Probab=99.95  E-value=4.8e-27  Score=227.39  Aligned_cols=165  Identities=19%  Similarity=0.244  Sum_probs=157.0

Q ss_pred             HHHHHHhccceEEEecCcccccc-c-cccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhh
Q 035901            4 LAAKLQDHINFYIDIDTDRLLEK-D-SVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILG   81 (415)
Q Consensus         4 lI~kLqe~vd~lIVI~nDrLLe~-D-~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~   81 (415)
                      -+++|++++|.+|+||||+|++. + ..++.+||+.||++|..+|++|+++|.-+          |.+|+||+||+++|.
T Consensus       146 ~l~~L~e~~D~~ividNe~L~~i~~~~l~i~~af~~~N~~i~~~v~~it~~ir~p----------G~iNvD~~dv~t~L~  215 (338)
T 2r75_1          146 GLEKLKESSDAYIVIHNDKIKELSNRTLTIKDAFKEVDSVLSKAVRGITSIVVTP----------AVINVDFADVRTTLE  215 (338)
T ss_dssp             HHHHHHHTCSEEEEEEHHHHHHTSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHSC----------CSBCCCHHHHHHHHT
T ss_pred             HHHHHHhcCCeEEEeccHHHHhhhhccCChHHHHHHHHHHHHHHHhhhhhhhccC----------CceeCCHHHhhhhee
Confidence            47899999999999999999999 5 78999999999999999999999999999          999999999999999


Q ss_pred             ccCceeEecccccchhhHHH--HHhhhCCcccc-ccccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEEeee
Q 035901           82 NYKEAKIGFGAGSNIKTSIL--QAIYDCPFIGA-GVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFV  158 (415)
Q Consensus        82 ~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~-gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIfg~~  158 (415)
                      .+|.|.||+|.+.|++|+.+  ++++.+|||+. .+.+|++ +++|++|+.++++.|++++...|++..+++.+|+||.+
T Consensus       216 ~~g~a~~g~g~a~g~~r~~~a~~~ai~s~lle~n~~~~a~~-~l~~i~G~~dl~~~ev~~a~~~I~~~~~~~~~i~~G~~  294 (338)
T 2r75_1          216 EGGLSIIGMGEGRGDEKADIAVEKAVTSPLLEGNTIEGARR-LLVTIWTSEDIPYDIVDEVMERIHSKVHPEAEIIFGAV  294 (338)
T ss_dssp             TCEEEEEEEEEEESTTHHHHHHHHHHHCBSSBSSCGGGCSE-EEEEEEECTTSCTTHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             CCccceeeeccCCccchHHHHHHHHHHhhhhcccchhhhhe-EEEEEEcCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEE
Confidence            99999999999999999988  78999999996 6999999 99999999999999999999999999999999999999


Q ss_pred             cCCCCCCCeEEEEEEEecCcc
Q 035901          159 HEPNLEPDLLVTTVVTLGLVE  179 (415)
Q Consensus       159 ~dp~ledel~VT~Iatl~~~~  179 (415)
                      ++|.++++++||+|+|--...
T Consensus       295 ~~~~~~~~~~vtviatg~~~~  315 (338)
T 2r75_1          295 LEPQEQDFIRVAIVATDFPEE  315 (338)
T ss_dssp             ECTTCCSEEEEEEEEECCSSC
T ss_pred             eCCCCCCeEEEEEEECCCCCC
Confidence            999999999999999965544

>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*

Probab=99.86  E-value=7.1e-22  Score=194.64  Aligned_cols=169  Identities=14%  Similarity=0.068  Sum_probs=142.4

Q ss_pred             HHHHHH---HhccceEEEecCcccccc-c----cccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChH
Q 035901            3 DLAAKL---QDHINFYIDIDTDRLLEK-D----SVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVS   74 (415)
Q Consensus         3 ~lI~kL---qe~vd~lIVI~nDrLLe~-D----~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfa   74 (415)
                      +-|+.|   .++||++||||||+|++. +    ..++.+||+.||++|..+|++|++++..+       .-.|++|+||+
T Consensus       165 ~~i~~l~~~~~~vd~~ividN~~l~~~~~~~~~~~~~~~af~~an~~l~~~v~~i~~~~~~~-------~~~g~in~D~a  237 (389)
T 4ei7_A          165 SRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSALANEYTSYSNKYIADALHEINLVTSSF-------TPFSDTHFDAS  237 (389)
T ss_dssp             HHHHHHHHTGGGSSEEEEEEHHHHHHHHHHHCTTCCGGGHHHHHHHHHHHHHHHHHHHTTSS-------EESSSCCCCHH
T ss_pred             HHHHHHHHHhccCCeEEEeccHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCCeEEeeHH
Confidence            346667   467999999999999997 3    47899999999999999999999999765       12389999999


Q ss_pred             HHHHHhhccCceeEeccc-------ccchhhHHH--HHhhhCCcccc----ccccCCceEEEEeccCcc-----cCchhh
Q 035901           75 EIFKILGNYKEAKIGFGA-------GSNIKTSIL--QAIYDCPFIGA----GVKELNGMVICVVATSNI-----IGNNDL  136 (415)
Q Consensus        75 DVr~iL~~aGeA~iGfGa-------G~g~~rAI~--qaa~~sPlLe~----gI~gan~~vlinItgs~d-----l~l~D~  136 (415)
                      ||+++|++.|.|.||+|.       +.|++++.+  +.++.+|+|..    .|++|.+ +++||+++.+     ++..++
T Consensus       238 Dv~~vm~~~G~a~~G~~~~~~~~~~~~~~~~~~~a~~~ai~~~ll~~~~~~~i~~A~~-~ll~I~~~~~~~~~~~~~~~~  316 (389)
T 4ei7_A          238 EFAQVINTPGVLSLAKLELKSNQLDTENPLGYLTQLGNALEKGVLYDTEREELESAKK-SALSIVTSPLRAGRLYNFSFL  316 (389)
T ss_dssp             HHHHHHTSSEEEEEEEEEEEGGGCCTTSTHHHHHHHHHHHHBCSSSBCCHHHHTTCSE-EEEEEEECHHHHHHHSSHHHH
T ss_pred             HHHHHhcCCCEEEEEeeeccccccccccchHHHHHHHHHHhccccccccccChhhhhe-EEEEEEcCcccchhhhhHHHH
Confidence            999999999999999995       566678877  88899999964    5999999 9999999987     556667


Q ss_pred             HHHHHHHHHhhcc----cCCeEEeeecCCCCCCCeEEEEEEEecCcc
Q 035901          137 QSFLHTFRQITEY----TGETIVSFVHEPNLEPDLLVTTVVTLGLVE  179 (415)
Q Consensus       137 ~s~l~~~R~atg~----~~DIIfg~~~dp~ledel~VT~Iatl~~~~  179 (415)
                      ..+-+.+++.+..    ...|++|...++.++++++||+||+=-+.+
T Consensus       317 ~~~~~~i~~~~~~~~~~~~~i~~g~~~~~~~~~~V~v~viatG~~~~  363 (389)
T 4ei7_A          317 NQMENFLKERTPYVDERPIAPYVNKHTTKKEEDIVKFYSVVAGLPLP  363 (389)
T ss_dssp             HHHHHHHHHHSTTCSCCCEEEEECTTCCGGGTTEEEEEEEEEEECCC
T ss_pred             HHHHHHHHhhccccCcccceEEecCCCCcCCCCeEEEEEEEecCCch
Confidence            7777777777752    345788999999999999999999866543

>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}

Probab=99.71  E-value=2.1e-17  Score=163.05  Aligned_cols=137  Identities=11%  Similarity=-0.048  Sum_probs=118.8

Q ss_pred             HHHHHh---ccceE--EEecCccccccccccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHH
Q 035901            5 AAKLQD---HINFY--IDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKI   79 (415)
Q Consensus         5 I~kLqe---~vd~l--IVI~nDrLLe~D~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~i   79 (415)
                      +..|++   ++|.+  |+||||+         ..+|..+|+++..+|++|+.++..+          |.+||||+|||++
T Consensus       146 l~~L~e~sD~vD~lcvividNea---------~~ay~~lN~lIaq~vs~lt~~l~~~----------G~iNVDfaDv~tv  206 (360)
T 3v3t_A          146 WNDIMRSTNEGKDISIYLLDNNK---------REKESDINKEFATLFNDFMNMSESH----------AEGVVDEDEISKL  206 (360)
T ss_dssp             HHHHHHHTTTTTSSEEEEEEGGG---------SSSHHHHHHHHHHHHHHHHGGGSCC----------SSCCCCHHHHHHH
T ss_pred             HHHHHhhhccCCceEEEEEeCCC---------chhHHHHHHHHHHHHHHHHHhhccC----------CceeeeHHHHHHH
Confidence            678999   78888  9999998         4689999999999999999999988          9999999999999


Q ss_pred             hhccCceeEecccccchhhHHH--HHhhhCCccc-cccccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCCeEEe
Q 035901           80 LGNYKEAKIGFGAGSNIKTSIL--QAIYDCPFIG-AGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVS  156 (415)
Q Consensus        80 L~~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe-~gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~DIIfg  156 (415)
                      |+..|.|+||.  +.|++||.+  +.|++||||+ ..|+||++ ++||+|+     ..|++++...|    ++..+ +||
T Consensus       207 m~~~G~a~mg~--~~g~~ra~~A~~~Ai~spLl~~~~i~ga~~-~linit~-----~~d~~ei~~~i----~~~~~-~fg  273 (360)
T 3v3t_A          207 LTMKKSNVILE--FDDKEDIQVALAKSLKESIFAEYTTNTCEF-MGISTTR-----VVDVEAIKSIV----GYPRR-TFK  273 (360)
T ss_dssp             HHCCEEEEEEE--CCSSSCHHHHHHHHHHTCSBCCCCCCBCSE-EEEEESS-----CCCHHHHHHHH----CBCSE-EEE
T ss_pred             HhCCCcEEEEE--ecCccHHHHHHHHHHhCcCCCCCCccCCcE-EEEEecC-----CCCHHHHHHHh----CCchh-eee
Confidence            99999999994  689999999  9999999998 56999999 9999986     57888888888    54555 788


Q ss_pred             eecCCCCCCCeEEEEEEEecCcc
Q 035901          157 FVHEPNLEPDLLVTTVVTLGLVE  179 (415)
Q Consensus       157 ~~~dp~ledel~VT~Iatl~~~~  179 (415)
                      + +    +.+.+ |+|||=...+
T Consensus       274 ~-y----~~~~~-~vv~tG~~~~  290 (360)
T 3v3t_A          274 G-Y----NSKKN-IVVATGIEPQ  290 (360)
T ss_dssp             E-E----CSSCC-EEEEEEECCC
T ss_pred             e-e----CCccc-EEEEcCCCcc
Confidence            8 5    46667 7777655544

>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*

Probab=99.62  E-value=1.3e-15  Score=153.30  Aligned_cols=155  Identities=13%  Similarity=0.054  Sum_probs=124.1

Q ss_pred             ccceEEEecCcccccc-ccc----cHHH---HHH-HhhHHHHHHhhHHHHHhhc--chhhhhhhhccCccccChHHHHHH
Q 035901           11 HINFYIDIDTDRLLEK-DSV----TLDE---ALK-TANNAVFLAVNAISTLSSD--MHRKLIDIVHSNVKELKVSEIFKI   79 (415)
Q Consensus        11 ~vd~lIVI~nDrLLe~-D~v----TL~E---Afk-~Annal~~gIkgISdlIs~--~h~~f~~~~~~glinldfaDVr~i   79 (415)
                      ++|.+|+||||+|.+. +..    ++.+   ||+ .||++|..+|++|++++..  +          |.+|+||+||+++
T Consensus       224 ~~D~vividNe~l~~i~~~~~~~~~~~~~~~af~~~aN~~Ia~~I~~I~~~i~~~~~----------G~iNvD~aDv~t~  293 (427)
T 3m89_A          224 PLANVIVNDNTQMQRIIESQKGTKDLKNRYVNWKEVANDNVVSTLHEINIIPENYGS----------DNVTYDPSDLIKL  293 (427)
T ss_dssp             SEEEEEEEEHHHHHHHHHHSSCSSSCCCSCSCHHHHHHHHHHHHHHHHHHHHHHCCC----------SSSCCCHHHHHHH
T ss_pred             cccEEEEEehHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHhccCCC----------CcEeecHHHHHHh
Confidence            9999999999998766 322    3455   999 8999999999999999974  7          9999999999999


Q ss_pred             hh-ccCceeEecccccchh--hHHH--HHhh-hCCccccc-cccCCceEEEEeccCcccCchhhHHHHHHHHHhhcccCC
Q 035901           80 LG-NYKEAKIGFGAGSNIK--TSIL--QAIY-DCPFIGAG-VKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGE  152 (415)
Q Consensus        80 L~-~aGeA~iGfGaG~g~~--rAI~--qaa~-~sPlLe~g-I~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg~~~D  152 (415)
                      |. ..|.|.||+|.+.+..  ++..  +.++ ++||+... +++|++ ++|+|+++.+++..+...+.+.+|++.++..|
T Consensus       294 L~~~~G~a~iG~a~~~~~d~~~~~~ai~~al~~~~Ll~~~d~~~Ak~-~lv~i~g~~~~~~~~~~~~~~~~~~~l~e~t~  372 (427)
T 3m89_A          294 LSIPGRFLTIGKARIAKFDLHSLENSIKRSLDEGFFSAEHQFETATM-YGGFVLRPSNADFFKDVNTENRIRNTLGEYKR  372 (427)
T ss_dssp             HHSSCSEEEEEEEEECSCSHHHHHHHHHHHHHSSTTCSCCCGGGCCE-EEEEEEEESSCGGGGCHHHHHHHHHHHTTTSC
T ss_pred             CCCCCCeEEEEEecccccchhhHHHHHHHHHhCCCcccccCcccccE-EEEEEEeCchhhhhhhHHHHHHHHHHHHhcCC
Confidence            99 8999999999987653  3333  4455 56665554 999999 99999999999999999999999999993333


Q ss_pred             --eEEeeecCC--CCCCCeEEEEEEEecCcc
Q 035901          153 --TIVSFVHEP--NLEPDLLVTTVVTLGLVE  179 (415)
Q Consensus       153 --IIfg~~~dp--~ledel~VT~Iatl~~~~  179 (415)
                        .|-|-..+|  +-+ +  |+..+-+++-+
T Consensus       373 ~~~v~g~~~~~~~~~~-~--~~~~~~~~g~~  400 (427)
T 3m89_A          373 LDEIAGKFGDPIWDNE-Y--AVCYTIFAGMT  400 (427)
T ss_dssp             GGGSEEEEECCEESSS-S--EEEEEEEEEEC
T ss_pred             ceeccCCCCCcccCCc-c--eEEEEEecCCC
Confidence              346777777  444 3  55555555544

>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}

Probab=98.47  E-value=1.5e-07  Score=93.81  Aligned_cols=178  Identities=13%  Similarity=0.132  Sum_probs=115.7

Q ss_pred             HHHHHhccceEEEecCcccccc-c-cccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhhc
Q 035901            5 AAKLQDHINFYIDIDTDRLLEK-D-SVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILGN   82 (415)
Q Consensus         5 I~kLqe~vd~lIVI~nDrLLe~-D-~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~~   82 (415)
                      +.+|++++|.+|+||||+|++. . ..+...+|+.+|++|..+|++|++.+.-+          |.+|+||+||++.|--
T Consensus       190 l~~L~e~~D~~i~idN~al~~i~~~~l~~~~~f~~~N~lia~~v~~it~~lr~~----------g~lN~D~~d~~t~lvP  259 (426)
T 2btq_B          190 LQRILDNADGAVLLDNEALFRIAKAKLNRSPNYMDLNNIIALIVSSVTASLRFP----------GKLNTDLSEFVTNLVP  259 (426)
T ss_dssp             HHHHHHHCSEEEEEEHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHSS----------CSSSCSHHHHHHHHCS
T ss_pred             HHHHHHhCCcceeeccHHHHHHHhccCCCCcHHHHHHHHHHhhhcchhhhccCC----------CcccCCHHHHHHHHhh
Confidence            6789999999999999999998 3 45577899999999999999999999999          9999999999999975


Q ss_pred             cC---ceeEecccccc------hhhHHH---HHhhhC--CccccccccCCceEEEEeccCcccCchhhHHHHHHHHHhhc
Q 035901           83 YK---EAKIGFGAGSN------IKTSIL---QAIYDC--PFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITE  148 (415)
Q Consensus        83 aG---eA~iGfGaG~g------~~rAI~---qaa~~s--PlLe~gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg  148 (415)
                      +.   -...|+.-=..      ++..+.   +.+++.  -++....+..+-+-.|.+.-| ++...|+...+..||+..-
T Consensus       260 ~P~~hf~~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~g~yla~~~i~rG-~v~~~~v~~~~~~ik~~~~  338 (426)
T 2btq_B          260 FPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDNFTAAIDWQQGVYLAASALFRG-DVKAKDVDENMATIRKSLN  338 (426)
T ss_dssp             STTCCEEEEECSCC-----------CCHHHHHHHTCGGGBSSCCCTTTCCEEEEEEEEEC-C----CTTTTHHHHHTTSC
T ss_pred             CCCCceeeccccccccchhhccccCCHHHHhhhhcCccceeEecCCCCchHHHHHHHHcC-CCCHHHHHHHHHHHhcCCC
Confidence            43   33445443111      222222   444331  122212233344434555544 7888899888888876654


Q ss_pred             c----c--CCeEEeeecCCCCCCCeEEEEEEEecCccccccchhhhhhhhhhhhHHH
Q 035901          149 Y----T--GETIVSFVHEPNLEPDLLVTTVVTLGLVEQASRKSSIFSRLAHHFPFVF  199 (415)
Q Consensus       149 ~----~--~DIIfg~~~dp~ledel~VT~Iatl~~~~~~s~k~~~lS~La~HFPfi~  199 (415)
                      +    .  ..+=+|+..-|-.+-++-|+.   |+|++   .=...|+++.+-|--.+
T Consensus       339 fv~W~p~~~~~k~~i~~~~p~~~~~s~~~---lsNst---aI~~~~~~~~~~f~~m~  389 (426)
T 2btq_B          339 YASYMPASGGLKLGYAETAPEGFASSGLA---LVNHT---GIAAVFERLIAQFDIMF  389 (426)
T ss_dssp             BCTTSCSSCSEEEEEESCCCTTCSSBCCE---EEEEG---GGHHHHHHHHHHHHHHH
T ss_pred             CcccCCCCCceeeeeeccCCCCCcceeEE---ecCCh---HHHHHHHHHHHHHHHHh
Confidence            2    1  466788887776666665554   44443   12236778877776433

>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*

Probab=98.30  E-value=3.2e-06  Score=85.53  Aligned_cols=178  Identities=14%  Similarity=0.215  Sum_probs=110.2

Q ss_pred             HHHHHhccceEEEecCcccccc-c-cccHH-HHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccC--hHHHHHH
Q 035901            5 AAKLQDHINFYIDIDTDRLLEK-D-SVTLD-EALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELK--VSEIFKI   79 (415)
Q Consensus         5 I~kLqe~vd~lIVI~nDrLLe~-D-~vTL~-EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinld--faDVr~i   79 (415)
                      +..|.+++|.+|+||||+|++. . ..++. .+|+.+|++|..+|++|+..+.-+          |.+|+|  |+||++.
T Consensus       193 l~~L~e~~D~~i~idNeaL~~i~~~~l~i~~~~f~~~N~lia~~v~~it~~lr~~----------g~lN~D~~l~d~~t~  262 (473)
T 2bto_A          193 LNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALAGITASMRFS----------GFLTVEISLRELLTN  262 (473)
T ss_dssp             HHHHHHTCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHHHC----------------CCCHHHHHHH
T ss_pred             HHHHHhhCCeEEEeccHHHHHHhccccccCcchHHHHHHHHhhhcccchhhcccC----------CcccCCccHHhhhhh
Confidence            6789999999999999999998 4 66774 899999999999999999999999          999999  9999999


Q ss_pred             hhccCc---eeEeccc------ccchhhHHH---HHhhh-CC-ccccccccCCceEEEEeccCcccCchhh-HHHHHHHH
Q 035901           80 LGNYKE---AKIGFGA------GSNIKTSIL---QAIYD-CP-FIGAGVKELNGMVICVVATSNIIGNNDL-QSFLHTFR  144 (415)
Q Consensus        80 L~~aGe---A~iGfGa------G~g~~rAI~---qaa~~-sP-lLe~gI~gan~~vlinItgs~dl~l~D~-~s~l~~~R  144 (415)
                      |--+..   ...|+.-      .+-++..+.   +..++ .. ++.......+-+..|.+.-| +++..|+ ...+..|+
T Consensus       263 LvP~Prlhf~~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~gkyla~~~i~RG-~v~~~dv~~~~i~~ik  341 (473)
T 2bto_A          263 LVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLSTAVLYRG-IMEDKPLADAALAAMR  341 (473)
T ss_dssp             HCSSTTCCEEEEEEECCCCCC-----CCCHHHHHHHHTSGGGBSSSSCGGGSCEEEEEEEEEE-C----CCHHHHHHHHH
T ss_pred             eeecCCcceeeeccccccccchhccccCCHHHHHhhhcccccceeecCCCCchHHHHHHhhcC-CCChHHhhHHHHHHHH
Confidence            954443   3445421      111233333   44433 11 22222444555444555545 4788899 88888888


Q ss_pred             Hh--hcc--cCCeEEeeecCCCCCCCeEEEEEEEecCccccccchhhhhhhhhhhhHHH
Q 035901          145 QI--TEY--TGETIVSFVHEPNLEPDLLVTTVVTLGLVEQASRKSSIFSRLAHHFPFVF  199 (415)
Q Consensus       145 ~a--tg~--~~DIIfg~~~dp~ledel~VT~Iatl~~~~~~s~k~~~lS~La~HFPfi~  199 (415)
                      +-  .-+  ...+=+++..-|-.+.+.-++.   |+|++   .=...|++|.+-|--.+
T Consensus       342 ~k~~~~FW~p~~~kv~i~~~pp~g~~~s~~~---lsNsT---aI~~~~~~l~~kf~~m~  394 (473)
T 2bto_A          342 EKLPLTYWIPTAFKIGYVEQPGISHRKSMVL---LANNT---EIARVLDRICHNFDKLW  394 (473)
T ss_dssp             TTSCBCSSSCCCEEEEEESSCCSSCSEEEEE---EEEET---THHHHHHHHHHHHHHHH
T ss_pred             hhcccceecCCcceecccccCCcCcceeEEE---ecCCc---hHHHHHHHHHHHHHHHh
Confidence            54  222  3456678777777776665554   44443   12236777777665443

>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*

Probab=98.10  E-value=6e-07  Score=91.05  Aligned_cols=178  Identities=12%  Similarity=0.111  Sum_probs=115.5

Q ss_pred             HHHHHhccceEEEecCcccccc-c-cccHHH-HHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhh
Q 035901            5 AAKLQDHINFYIDIDTDRLLEK-D-SVTLDE-ALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILG   81 (415)
Q Consensus         5 I~kLqe~vd~lIVI~nDrLLe~-D-~vTL~E-Afk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~   81 (415)
                      +..|.+++|.+|+||||+|++. + ..++.+ +|+.+|++|..+|+||+..+.-+          |.+|+||+||++.|-
T Consensus       192 l~~L~e~sD~~i~idNeaL~~i~~~~l~i~~p~f~~~N~lia~~vs~iT~~lr~p----------G~lN~Dl~d~~tnLv  261 (475)
T 3cb2_A          192 LKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYP----------GYMNNDLIGLIASLI  261 (475)
T ss_dssp             HHHHHHSCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHTTTTSSS----------SCTTCSHHHHHHHHC
T ss_pred             HHHHHhhCCEEEEeccHHHHHHHhhcCCCCcchHHHHHHHHhhhccccccccccC----------Ccccchhhhhcceee
Confidence            6789999999999999999998 4 677765 99999999999999999999999          999999999999996


Q ss_pred             ccCce---eEecc------c-ccchhhHHH---HHhhhCC-ccccc-cc---cCCceEEEEeccCcccCchhhHHHHHHH
Q 035901           82 NYKEA---KIGFG------A-GSNIKTSIL---QAIYDCP-FIGAG-VK---ELNGMVICVVATSNIIGNNDLQSFLHTF  143 (415)
Q Consensus        82 ~aGeA---~iGfG------a-G~g~~rAI~---qaa~~sP-lLe~g-I~---gan~~vlinItgs~dl~l~D~~s~l~~~  143 (415)
                      -+-.-   ..+|-      . .+-++..+.   +.+++.- .+-++ -+   .-+-+-.|++--| ++...|+...+..|
T Consensus       262 P~PrlhFl~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~~~~gkyla~~~~~RG-~v~~~dv~~~i~~i  340 (475)
T 3cb2_A          262 PTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQG-EVDPTQVHKSLQRI  340 (475)
T ss_dssp             SSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSGGGBSSCCCCC--CCCCEEEEEEEEES-SCCHHHHHHHHHHH
T ss_pred             cccceeEeecccccccccccccccccCCHHHHHHHHhccccceEecCcccccccchhhhHHhhcC-CCCHHHHHHHHHHh
Confidence            65442   23332      1 222333332   4444310 11010 11   1122334444444 88999999999998


Q ss_pred             HHh--hc----ccCCeEEeeecCCCC---CCCeEEEEEEEecCccccccchhhhhhhhhhhhHHH
Q 035901          144 RQI--TE----YTGETIVSFVHEPNL---EPDLLVTTVVTLGLVEQASRKSSIFSRLAHHFPFVF  199 (415)
Q Consensus       144 R~a--tg----~~~DIIfg~~~dp~l---edel~VT~Iatl~~~~~~s~k~~~lS~La~HFPfi~  199 (415)
                      ++-  .-    ....+=+|+..-|-.   +.++-++   .|+|++-   =...|+++.+-|--.+
T Consensus       341 k~k~~~~fv~W~p~~~k~~i~~~~p~~~~~~~~s~~---~lsN~Ta---I~~~f~ri~~kfd~m~  399 (475)
T 3cb2_A          341 RERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGL---MMANHTS---ISSLFERTCRQYDKLR  399 (475)
T ss_dssp             HHTTCSCBCTTSCCCEEEEEECCCCC-----CCEEE---EEEEEGG---GHHHHHHHHHHHHHHH
T ss_pred             hcccCCccceecCCCceeeeeccCCccCCCcceEEE---EecCChH---HHHHHHHHHHHHHHHh
Confidence            865  22    234566787766654   3445444   4455431   1236778877775443

>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...

Probab=95.68  E-value=0.0042  Score=63.08  Aligned_cols=178  Identities=12%  Similarity=0.147  Sum_probs=110.5

Q ss_pred             HHHHHhccceEEEecCcccccc-c-cccH-HHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhh
Q 035901            5 AAKLQDHINFYIDIDTDRLLEK-D-SVTL-DEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILG   81 (415)
Q Consensus         5 I~kLqe~vd~lIVI~nDrLLe~-D-~vTL-~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~   81 (415)
                      +..|.+++|..|+||||.|.+. . ...+ .-+|...|+++...|++|+..+.-+          |..|+|+.|+.+-|-
T Consensus       191 l~~L~e~sD~~~~idNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~slRf~----------G~lN~Dl~~l~tnLV  260 (451)
T 3ryc_A          191 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFD----------GALNVDLTEFQTNLV  260 (451)
T ss_dssp             HHHHGGGCSEEEEEEHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHHHHHTT----------CSSSCSHHHHHHHHC
T ss_pred             HHHHHhcccceeEeccHHHHHHHHHhccCCCCCchhhHHHHHhcccccccccccC----------cccccCHHHHhhccC
Confidence            4679999999999999999987 2 3444 3589999999999999999999999          999999999999875


Q ss_pred             ccCce---eEe------cccccchhhHHH---HHhhhCC-ccccc-cccCCceEEEEeccCcccCchhhHHHHHHHHHh-
Q 035901           82 NYKEA---KIG------FGAGSNIKTSIL---QAIYDCP-FIGAG-VKELNGMVICVVATSNIIGNNDLQSFLHTFRQI-  146 (415)
Q Consensus        82 ~aGeA---~iG------fGaG~g~~rAI~---qaa~~sP-lLe~g-I~gan~~vlinItgs~dl~l~D~~s~l~~~R~a-  146 (415)
                      -+-.-   +.|      -+..+-++..+.   +++++.= .+-++ -..-+-+-.|.+--| ++...|++..+..++.- 
T Consensus       261 P~PrlHF~~~s~aPl~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~RG-~v~~~dv~~~i~~ik~k~  339 (451)
T 3ryc_A          261 PYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRG-DVVPKDVNAAIATIKTKR  339 (451)
T ss_dssp             SSSSCCCCEEEEECCCBSSSCCCCCCCHHHHHHHTTCGGGBSSCCCGGGSCEEEEEEEEEE-SCCHHHHHHHHHHHHHHC
T ss_pred             CCCceeeeccccCccccccccccccCCHHHHHHHHhccccceEecCCCCCchheehhhccc-CCCHHHHHHHHHHHhhcC
Confidence            54321   122      222333444443   3333210 00000 111122334444433 67899999999988863 


Q ss_pred             -h---c-ccCCeEEeeecCCCC--------CCCeEEEEEEEecCccccccchhhhhhhhhhhhHHH
Q 035901          147 -T---E-YTGETIVSFVHEPNL--------EPDLLVTTVVTLGLVEQASRKSSIFSRLAHHFPFVF  199 (415)
Q Consensus       147 -t---g-~~~DIIfg~~~dp~l--------edel~VT~Iatl~~~~~~s~k~~~lS~La~HFPfi~  199 (415)
                       .   . ....+=+|+..-|-.        +-+.-|+.|   +|++   -=...|+||.+-|-..+
T Consensus       340 ~~~Fv~W~p~~~kv~i~~~pP~~~p~~~la~~~~s~~~l---sNsT---aI~~~f~rl~~kFd~m~  399 (451)
T 3ryc_A          340 SIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML---SNTT---AIAEAWARLDHKFDLMY  399 (451)
T ss_dssp             CCCBCTTSCEEEEEEEECSCCCCCTTSSBCCCSEEEEEE---EEEG---GGHHHHHHHHHHHHHHH
T ss_pred             CcceEEEccCceeeeeeccCCccCCCccccccceeeEEe---cCch---HHHHHHHHHHHHHHHHh
Confidence             1   2 223355677666543        223444444   4443   12236778877775443

>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...

Probab=95.55  E-value=0.0053  Score=62.23  Aligned_cols=178  Identities=12%  Similarity=0.181  Sum_probs=114.9

Q ss_pred             HHHHHhccceEEEecCcccccc--ccccH-HHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccccChHHHHHHhh
Q 035901            5 AAKLQDHINFYIDIDTDRLLEK--DSVTL-DEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILG   81 (415)
Q Consensus         5 I~kLqe~vd~lIVI~nDrLLe~--D~vTL-~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glinldfaDVr~iL~   81 (415)
                      +..|.+++|..++||||.|.+.  ....+ ..+|...|+++...|++|+..+.-+          |..|+|+.|+.+=|-
T Consensus       189 l~~L~e~sD~~~~iDNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~slRf~----------G~lN~Dl~~l~tnLV  258 (445)
T 3ryc_B          189 VHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP----------GQLNADLRKLAVNMV  258 (445)
T ss_dssp             HHHHHHHCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHHHSC----------CSSSCSHHHHHHHHC
T ss_pred             HhhhhcccceeEeecchhHHHHHHhccCCCCCcchhhHHHHHhcchhhccccccC----------cccccCHHHHhhccc
Confidence            4678999999999999999998  34444 4789999999999999999999999          999999999998775


Q ss_pred             ccCce---eEec------ccccchhhHHH---HHhhhCCccccccc--cCCceEEEEeccCcccCchhhHHHHHHHHHh-
Q 035901           82 NYKEA---KIGF------GAGSNIKTSIL---QAIYDCPFIGAGVK--ELNGMVICVVATSNIIGNNDLQSFLHTFRQI-  146 (415)
Q Consensus        82 ~aGeA---~iGf------GaG~g~~rAI~---qaa~~sPlLe~gI~--gan~~vlinItgs~dl~l~D~~s~l~~~R~a-  146 (415)
                      -+-.-   +.||      +..+-++..+.   ++.++.=-.-.+..  .-+-+-.|.+--| ++...|++..+..++.- 
T Consensus       259 P~PrlhF~~~s~aP~~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~RG-~v~~kdv~~~i~~ik~k~  337 (445)
T 3ryc_B          259 PFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVATIFRG-RMSMKEVDEQMLNIQNKN  337 (445)
T ss_dssp             SSTTCCEEEEEEESCCCTTCCCCCCCCHHHHHHHTTSGGGBSSSCCGGGSCEEEEEEEEEE-SCCHHHHHHHHHHHHHHT
T ss_pred             CCCceeeeccccCcccccchhhhccCCHHHHHHHHHhhcCCeeecCCCCCcceeeeeeeec-CCChHHHHHHHHHHHhhC
Confidence            55432   1222      22222333332   44333100001110  1122333444433 57889999999988753 


Q ss_pred             ----hc-ccCCeEEeeecCCCCCCCeEEEEEEEecCccccccchhhhhhhhhhhhHHH
Q 035901          147 ----TE-YTGETIVSFVHEPNLEPDLLVTTVVTLGLVEQASRKSSIFSRLAHHFPFVF  199 (415)
Q Consensus       147 ----tg-~~~DIIfg~~~dp~ledel~VT~Iatl~~~~~~s~k~~~lS~La~HFPfi~  199 (415)
                          +. ....+=+|+..-|-..-++-|+.|   +|++   -=...|+||.+.|-..+
T Consensus       338 ~~~Fv~W~p~~~k~~i~~~pp~~~~~s~~~l---sNsT---aI~~~~~rl~~kFd~m~  389 (445)
T 3ryc_B          338 SSYFVEWIPNNVKTAVCDIPPRGLKMSSTFI---GNST---AIQELFKRISEQFTAMF  389 (445)
T ss_dssp             GGGBCTTSTTCEEEEEESSCCTTCSEEEEEE---EEEG---GGHHHHHHHHHHHHHHH
T ss_pred             cccCcccCCCceeeeeeccCCcccceeeeee---cCcH---HHHHHHHHHHHHHHhhh
Confidence                22 344577888888777666655544   4443   12246788887776443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	415
d2vapa1	209	c.32.1.1 (A:23-231) Cell-division protein FtsZ {Ar	0.004

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 209

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 7   KLQDHINFYIDIDTDRLLEK-DSVTLDEALKTANNAVFLAVNAISTL 52
           +L+ H +  + I  ++L E   ++ L  A K A+  +  AV  +  L
Sbjct: 157 RLKQHTDTLVVIPNEKLFEIVPNMPLKLAFKVADEVLINAVKGLVEL 203

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	415
d2vapa2	123	Cell-division protein FtsZ {Archaeon Methanococcus	99.94
d1w5fa2	121	Cell-division protein FtsZ {Thermotoga maritima [T	99.94
d1rq2a2	107	Cell-division protein FtsZ {Mycobacterium tubercul	99.93
d1ofua2	109	Cell-division protein FtsZ {Pseudomonas aeruginosa	99.92
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	99.04
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	98.94

>d2vapa2 d.79.2.1 (A:232-354) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: Tubulin C-terminal domain-like
family: Tubulin, C-terminal domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.94  E-value=1.6e-27  Score=200.92  Aligned_cols=109  Identities=16%  Similarity=0.177  Sum_probs=105.2

Q ss_pred             cccChHHHHHHhhccCceeEecccccchhhHHH--HHhhhCCccccccccCCceEEEEeccCcccCchhhHHHHHHHHHh
Q 035901           69 KELKVSEIFKILGNYKEAKIGFGAGSNIKTSIL--QAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQI  146 (415)
Q Consensus        69 inldfaDVr~iL~~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~a  146 (415)
                      |||||+||+++|++.|.|+||+|.|.|++|+.+  +.|++||||+..|++|++ ||+||+|+.++++.|++.+.+.|++.
T Consensus         1 INlDfaDv~~vm~~~G~a~~giG~a~g~~ra~~Av~~Al~spLl~~~i~~A~g-~Lv~i~~~~d~~l~e~~~~~~~i~~~   79 (123)
T d2vapa2           1 INVDFADVKAVMNNGGLAMIGIGESDSEKRAKEAVSMALNSPLLDVDIDGATG-ALIHVMGPEDLTLEEAREVVATVSSR   79 (123)
T ss_dssp             BCCCHHHHHHHHTTCEEEEEEEEEECSTTHHHHHHHHHHTCTTCCSCGGGCCE-EEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHhCCCeEEEEeeccCCCchHHHHHHHHHhCcccCCCcccccE-EEEEEecCCCccHHHHHHHHHHHHHh
Confidence            799999999999999999999999999999999  999999999999999999 99999999999999999999999999


Q ss_pred             hcccCCeEEeeecCCCCCCCeEEEEEEEecCc
Q 035901          147 TEYTGETIVSFVHEPNLEPDLLVTTVVTLGLV  178 (415)
Q Consensus       147 tg~~~DIIfg~~~dp~ledel~VT~Iatl~~~  178 (415)
                      ++++.+||||.++||.++++++||+|||=-.+
T Consensus        80 ~~~da~ii~G~~~d~~l~d~i~VtiIATG~~~  111 (123)
T d2vapa2          80 LDPNATIIWGATIDENLENTVRVLLVITGVQS  111 (123)
T ss_dssp             SCTTCEEEEEEEECTTCSSCEEEEEEEECCGG
T ss_pred             cCCCccEEEEEEECCcCCCeEEEEEEEecCCc
Confidence            99999999999999999999999999974443

>d1w5fa2 d.79.2.1 (A:216-336) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: Tubulin C-terminal domain-like
family: Tubulin, C-terminal domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=4.6e-27  Score=198.27  Aligned_cols=106  Identities=11%  Similarity=0.211  Sum_probs=103.3

Q ss_pred             ccccChHHHHHHhhccCceeEecccccchhhHHH--HHhhhCCccccccccCCceEEEEeccCcccCchhhHHHHHHHHH
Q 035901           68 VKELKVSEIFKILGNYKEAKIGFGAGSNIKTSIL--QAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQ  145 (415)
Q Consensus        68 linldfaDVr~iL~~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~  145 (415)
                      -+|.||||||++|++.|.|+||+|.|+|++|+.+  +.|++||||+..|++|++ ||+||+|+.++++.|++++.+.||+
T Consensus         3 ~~n~dFaDvktvm~~~G~A~iG~G~a~G~~ra~~Av~~Al~sPLld~~i~~A~g-vLv~i~~g~d~sl~ei~~~~~~i~~   81 (121)
T d1w5fa2           3 RLTSRFARIESVMKDAGAAILGIGVGKGEHRAREAAKKAMESKLIEHPVENASS-IVFNITAPSNIRMEEVHEAAMIIRQ   81 (121)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHTCTTCCSCGGGCSE-EEEEEEECTTCCHHHHHHHHHHHHT
T ss_pred             cccCchHHHHHHHhCCCeEEEEEEEeCCCchHHHHHHHHHhCccccccccccce-EEEEEEeCCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999  999999999999999999 9999999999999999999999999


Q ss_pred             hhcccCCeEEeeecCCCC-CCCeEEEEEEE
Q 035901          146 ITEYTGETIVSFVHEPNL-EPDLLVTTVVT  174 (415)
Q Consensus       146 atg~~~DIIfg~~~dp~l-edel~VT~Iat  174 (415)
                      ..+++.+||||.++||++ +++++||+|||
T Consensus        82 ~~~~da~ii~G~~~d~~l~~~~i~VtiIAT  111 (121)
T d1w5fa2          82 NSSEDADVKFGLIFDDEVPDDEIRVIFIAT  111 (121)
T ss_dssp             TSCTTSEEEEEEEECTTSCTTEEEEEEEEE
T ss_pred             hcCCCCeEEEeeEECCCCCCCeEEEEEEEc
Confidence            999999999999999999 78999999987

>d1rq2a2 d.79.2.1 (A:206-312) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: Tubulin C-terminal domain-like
family: Tubulin, C-terminal domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=1.2e-26  Score=192.04  Aligned_cols=103  Identities=16%  Similarity=0.271  Sum_probs=101.6

Q ss_pred             cChHHHHHHhhccCceeEecccccchhhHHH--HHhhhCCccccccccCCceEEEEeccCcccCchhhHHHHHHHHHhhc
Q 035901           71 LKVSEIFKILGNYKEAKIGFGAGSNIKTSIL--QAIYDCPFIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITE  148 (415)
Q Consensus        71 ldfaDVr~iL~~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~atg  148 (415)
                      |||+|||++|++.|.|+||+|.|.|++|+.+  +.|++||||+..|++|++ +|+|++|+.++++.|++++.+.|++.++
T Consensus         1 VDFaDvktvm~~~G~A~~g~G~a~G~~ra~~Av~~Al~sPLl~~~i~~A~~-~Li~i~~g~~~~l~e~~~~~~~i~~~~~   79 (107)
T d1rq2a2           1 VDFADVKGIMSGAGTALMGIGSARGEGRSLKAAEIAINSPLLEASMEGAQG-VLMSIAGGSDLGLFEINEAASLVQDAAH   79 (107)
T ss_dssp             CCHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHTCGGGTTCGGGCSE-EEEEEEECTTCCHHHHHHHHHHHHHHSC
T ss_pred             CChHHHHHHHhCCCeEEEEEEEeCCCCcchHHHHHHHhCcccccChhcccE-EEEEecCCCccchHHHHHHHHHHHHhcC
Confidence            6999999999999999999999999999999  999999999999999999 9999999999999999999999999999


Q ss_pred             ccCCeEEeeecCCCCCCCeEEEEEEE
Q 035901          149 YTGETIVSFVHEPNLEPDLLVTTVVT  174 (415)
Q Consensus       149 ~~~DIIfg~~~dp~ledel~VT~Iat  174 (415)
                      .+.+||||.++||+++++++||+|||
T Consensus        80 ~da~ii~G~~~d~~l~~~i~VtiIaT  105 (107)
T d1rq2a2          80 PDANIIFGTVIDDSLGDEVRVTVIAA  105 (107)
T ss_dssp             TTCEEEEEEEECGGGTTEEEEEEEEE
T ss_pred             CCceEEEEEEECCCCCCeEEEEEEEe
Confidence            99999999999999999999999997

>d1ofua2 d.79.2.1 (A:209-317) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: Tubulin C-terminal domain-like
family: Tubulin, C-terminal domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=8e-26  Score=187.02  Aligned_cols=103  Identities=15%  Similarity=0.244  Sum_probs=100.4

Q ss_pred             cChHHHHHHhhccCceeEecccccchhhHHH--HHhhhCCcccc-ccccCCceEEEEeccCcccCchhhHHHHHHHHHhh
Q 035901           71 LKVSEIFKILGNYKEAKIGFGAGSNIKTSIL--QAIYDCPFIGA-GVKELNGMVICVVATSNIIGNNDLQSFLHTFRQIT  147 (415)
Q Consensus        71 ldfaDVr~iL~~aGeA~iGfGaG~g~~rAI~--qaa~~sPlLe~-gI~gan~~vlinItgs~dl~l~D~~s~l~~~R~at  147 (415)
                      +||+|||++|++.|.|+||+|.|+|++|+.+  +.|++||||+. .|++|++ ||+||+|+.++++.|++++.+.+++..
T Consensus         1 VDfaDvktvm~~~G~a~iG~G~a~G~~r~~~A~~~Al~~pll~~~~i~~Ak~-~Lv~i~gg~~~~l~e~~~~~~~i~~~~   79 (109)
T d1ofua2           1 VDFADVKTVMSEMGMAMMGTGCASGPNRAREATEAAIRNPLLEDVNLQGARG-ILVNITAGPDLSLGEYSDVGNIIEQFA   79 (109)
T ss_dssp             CCHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHTCGGGTTCCGGGCSE-EEEEEEECTTCCHHHHHHHHHHHHHHS
T ss_pred             CChHHHHHHHHCCCcEEEEEEEeCCCchHHHHHHHHHhCccccCCchhcCce-EEEEEEcCCCCCHHHHHHHHHHHHHhh
Confidence            6999999999999999999999999999999  99999999974 6999999 999999999999999999999999999


Q ss_pred             cccCCeEEeeecCCCCCCCeEEEEEEE
Q 035901          148 EYTGETIVSFVHEPNLEPDLLVTTVVT  174 (415)
Q Consensus       148 g~~~DIIfg~~~dp~ledel~VT~Iat  174 (415)
                      +++.+||||.+.||+++++++||+|||
T Consensus        80 ~~~a~ii~G~~~d~~l~~~v~VtiIAT  106 (109)
T d1ofua2          80 SEHATVKVGTVIDADMRDELHVTVVAT  106 (109)
T ss_dssp             CTTSEEEEEEEECTTCCSEEEEEEEEE
T ss_pred             ccCcEEEEEEEEcCccCCeEEEEEEEe
Confidence            999999999999999999999999997

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.04  E-value=6.4e-11  Score=106.08  Aligned_cols=59  Identities=27%  Similarity=0.408  Sum_probs=55.6

Q ss_pred             hHHHHHHHhccceEEEecCcccccc-c-cccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccc
Q 035901            2 KDLAAKLQDHINFYIDIDTDRLLEK-D-SVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKE   70 (415)
Q Consensus         2 ~~lI~kLqe~vd~lIVI~nDrLLe~-D-~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glin   70 (415)
                      .+-+++|++++|.+||||||+|++. + .+|++|||+.||++|..+|++|+++|+.|          |+||
T Consensus       138 ~~gl~~L~~~~D~~Ivi~Nd~L~~~~~~~~~~~~af~~ad~~l~~~i~~I~~li~~~----------g~iN  198 (198)
T d1rq2a1         138 ENGIAALRESCDTLIVIPNDRLLQMGDAAVSLMDAFRSADEVLLNGVQGITDLITTP----------GLIN  198 (198)
T ss_dssp             HHHHHHHHHHCSEEEEEEHHHHTTSSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSB----------CSSC
T ss_pred             HHHHHHHHHhhCeEEEechhhHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCC----------CCCC
Confidence            3568999999999999999999997 5 89999999999999999999999999999          9987

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.94  E-value=2.3e-10  Score=102.42  Aligned_cols=58  Identities=21%  Similarity=0.258  Sum_probs=54.8

Q ss_pred             HHHHHHHhccceEEEecCcccccc-c-cccHHHHHHHhhHHHHHHhhHHHHHhhcchhhhhhhhccCccc
Q 035901            3 DLAAKLQDHINFYIDIDTDRLLEK-D-SVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKE   70 (415)
Q Consensus         3 ~lI~kLqe~vd~lIVI~nDrLLe~-D-~vTL~EAfk~Annal~~gIkgISdlIs~~h~~f~~~~~~glin   70 (415)
                      +=+++|++++|.+||||||+|++. + .+|++|||+.||++|.-+|++|+++|+.|          |+||
T Consensus       139 ~gl~~L~~~~d~~ivi~Nd~l~~~~~~~~~~~~af~~~d~~l~~~v~~I~~li~~~----------g~iN  198 (198)
T d1ofua1         139 EGIRALAESVDSLITIPNEKLLTILGKDASLLAAFAKADDVLAGAVRGISDIIKRP----------GMIN  198 (198)
T ss_dssp             HHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSC----------SSSS
T ss_pred             HHHHHHHHHCCEEEEEehhhHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCC----------CCCC
Confidence            347899999999999999999997 6 79999999999999999999999999999          9987