Citrus Sinensis ID: 036522

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70
Protein Sequence
MASREGRRHHHDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPGNPSSTFSVFA
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHcccccccEEEcccccccccccEEEEEcccccccccccccEEEEc
Secondary Structure Prediction (SSPRO)
cccHHHccccccccHHHHHHHHHHHccccccccEEEcHHHHccccccEEEEEccccccccccccEEEEcc
Coil and Loop (DISEMBL)
masregrrhhhdlvPLAALISREMRNekmekpnvsfgqaaqsrkgedyfliktdcqrvpgnpsstfsvfa
Flexible Loop (DISEMBL)
masregrrhhhdlvplaALISREMRNEKMekpnvsfgqaaqsRKGEDYFLIKTDcqrvpgnpsstfsvfa
Low Complexity Region (SEG)
MASREGRRHHHDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPGNPSSTFSVFA
Disordered region (IsUnstruct)
***********************************************YFLIKTDC***************
Disordered Region (DISOPRED)
****************AALISR*******EKPNVSFGQAAQSRKGEDYFLIKTDCQRVPGNPS*TFSVFA
Disordered Region (DISEMBL)
**********HDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPGNP********
Disordered Region (DISPRO)
************LVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPGNPSSTFSVF*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASREGRRHHHDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPGNPSSTFSVFA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	70	2.2.26 [Sep-21-2011]
O80492	428	Probable protein phosphat	yes	no	1.0	0.163	0.657	3e-22
Q9M9C6	436	Probable protein phosphat	no	no	1.0	0.160	0.733	3e-22
Q10MN6	432	Probable protein phosphat	yes	no	0.814	0.131	0.578	9e-14
Q9FX08	428	Probable protein phosphat	no	no	0.857	0.140	0.533	3e-12
Q67J17	422	Probable protein phosphat	no	no	0.814	0.135	0.534	6e-11
Q6YTI2	442	Probable protein phosphat	no	no	0.814	0.128	0.508	1e-10
Q0JMD4	485	Probable protein phosphat	no	no	0.828	0.119	0.347	2e-05
Q7XTC7	461	Probable protein phosphat	no	no	0.614	0.093	0.444	4e-05

>sp|O80492|P2C05_ARATH Probable protein phosphatase 2C 5 OS=Arabidopsis thaliana GN=At1g09160 PE=2 SV=1

 Score =  103 bits (257), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/70 (65%), Positives = 56/70 (80%)

Query: 1  MASREGRRHHHDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPG 60
          M+  +  R  H LVPLA LI RE+R+EK+EKP V +GQAA ++KGEDYFLIKTDC+RVPG
Sbjct: 1  MSVSKASRTQHSLVPLATLIGRELRSEKVEKPFVKYGQAALAKKGEDYFLIKTDCERVPG 60

Query: 61 NPSSTFSVFA 70
          +PSS FSVF 
Sbjct: 61 DPSSAFSVFG 70

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6

>sp|Q9M9C6|P2C15_ARATH Probable protein phosphatase 2C 15 OS=Arabidopsis thaliana GN=At1g68410 PE=2 SV=1

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/75 (73%), Positives = 59/75 (78%), Gaps = 5/75 (6%)

Query: 1  MASREGRR--HHHD---LVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDC 55
          MASREG+R  H+HD   LVPLAALISRE +  KMEKP V FGQAAQSRKGEDY LIKTD 
Sbjct: 1  MASREGKRRNHNHDDEKLVPLAALISRETKAAKMEKPIVRFGQAAQSRKGEDYVLIKTDS 60

Query: 56 QRVPGNPSSTFSVFA 70
           RVP N S+ FSVFA
Sbjct: 61 LRVPSNSSTAFSVFA 75

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q10MN6|P2C33_ORYSJ Probable protein phosphatase 2C 33 OS=Oryza sativa subsp. japonica GN=Os03g0301700 PE=2 SV=1

 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 33/57 (57%), Positives = 42/57 (73%)

Query: 14 VPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPGNPSSTFSVFA 70
          +PLA LI RE+R    E+P V +G    +++GEDYFL+K DC RVPG+PSS FSVFA
Sbjct: 15 LPLATLIGRELRGGGSERPLVRYGHFGFAKRGEDYFLVKPDCLRVPGDPSSAFSVFA 71

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q9FX08|P2C12_ARATH Probable protein phosphatase 2C 12 OS=Arabidopsis thaliana GN=At1g47380 PE=2 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/60 (53%), Positives = 43/60 (71%)

Query: 11 HDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPGNPSSTFSVFA 70
          H  VPL+ L+ RE  NEK++ P +  GQ  QS+KGED+ L+KT+CQRV G+  +TFSVF 
Sbjct: 7  HHTVPLSVLLKRESANEKIDNPELIHGQHNQSKKGEDFTLVKTECQRVMGDGVTTFSVFG 66

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q67J17|P2C69_ORYSJ Probable protein phosphatase 2C 69 OS=Oryza sativa subsp. japonica GN=Os09g0459600 PE=2 SV=1

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 46/58 (79%), Gaps = 1/58 (1%)

Query: 14 VPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDC-QRVPGNPSSTFSVFA 70
          VPL  L+ RE+ +E+ME+P+V  G+AA+SRKGED+ L+  +  +RV G+PS++FSVFA
Sbjct: 10 VPLGVLLRREVTSERMERPDVLCGEAARSRKGEDFTLLLAEAGERVAGDPSTSFSVFA 67

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q6YTI2|P2C15_ORYSJ Probable protein phosphatase 2C 15 OS=Oryza sativa subsp. japonica GN=Os02g0567200 PE=2 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 2/59 (3%)

Query: 14 VPLAALISREMRNEKM--EKPNVSFGQAAQSRKGEDYFLIKTDCQRVPGNPSSTFSVFA 70
          VPLA L+ RE+ +EK   E+P +  G  +Q++KGEDY  +K DC+R+PG PSS+FS F 
Sbjct: 19 VPLAVLLRREVVSEKTAAERPELQVGLFSQAKKGEDYTFLKPDCERLPGVPSSSFSAFG 77

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q0JMD4|P2C03_ORYSJ Probable protein phosphatase 2C 3 OS=Oryza sativa subsp. japonica GN=Os01g0513100 PE=2 SV=2

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 37/95 (38%)

Query: 13  LVPLAALISREMRNEK---------------------------MEKPNVSFGQAAQSRKG 45
           LVPLAALI  E R E+                             +P + +G AAQS+KG
Sbjct: 32  LVPLAALIKEEARAERPMGSGSRICARDEEDGGGGGGAEGGRRWRRPLLRYGCAAQSKKG 91

Query: 46  EDYFLIKTDCQR----------VPGNPSSTFSVFA 70
           ED+FL++TDC R          +  +P  TF+VFA
Sbjct: 92  EDFFLLRTDCARPSTSSSSSSSLASSPPHTFAVFA 126

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q7XTC7|P2C40_ORYSJ Probable protein phosphatase 2C 40 OS=Oryza sativa subsp. japonica GN=Os04g0449400 PE=2 SV=3

 Score = 47.0 bits (110), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/45 (44%), Positives = 33/45 (73%), Gaps = 2/45 (4%)

Query: 27 EKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVP--GNPSSTFSVF 69
          E+  +P+V+ GQA +++KGED+ L+K  C+R+P  G P S F++F
Sbjct: 53 ERERRPSVAAGQACRAKKGEDFALLKPACERLPAGGAPFSAFALF 97

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	70
357444685	327	hypothetical protein MTR_1g110210 [Medic	1.0	0.214	0.814	3e-27
356575574	431	PREDICTED: probable protein phosphatase	1.0	0.162	0.814	1e-26
356536290	431	PREDICTED: probable protein phosphatase	1.0	0.162	0.8	3e-26
225424053	427	PREDICTED: probable protein phosphatase	0.985	0.161	0.814	5e-25
255572140	428	protein phosphatase, putative [Ricinus c	1.0	0.163	0.828	7e-25
147769927	1001	hypothetical protein VITISV_010117 [Viti	0.985	0.068	0.814	1e-24
224101763	428	predicted protein [Populus trichocarpa]	1.0	0.163	0.785	1e-23
449434598	433	PREDICTED: probable protein phosphatase	1.0	0.161	0.783	9e-23
225450661	430	PREDICTED: probable protein phosphatase	1.0	0.162	0.685	4e-21
147791475	406	hypothetical protein VITISV_015889 [Viti	1.0	0.172	0.685	5e-21

>gi|357444685|ref|XP_003592620.1| hypothetical protein MTR_1g110210 [Medicago truncatula] gi|355481668|gb|AES62871.1| hypothetical protein MTR_1g110210 [Medicago truncatula]

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/70 (81%), Positives = 63/70 (90%)

Query: 1  MASREGRRHHHDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPG 60
          MAS EGRRHHHDLVPLAAL+ REM++EKMEKP V  GQAAQS+KGEDYFLIK DCQRVPG
Sbjct: 1  MASGEGRRHHHDLVPLAALLKREMKSEKMEKPTVRIGQAAQSKKGEDYFLIKIDCQRVPG 60

Query: 61 NPSSTFSVFA 70
          N S++FSVFA
Sbjct: 61 NSSTSFSVFA 70

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575574|ref|XP_003555914.1| PREDICTED: probable protein phosphatase 2C 15-like [Glycine max]

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 62/70 (88%)

Query: 1  MASREGRRHHHDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPG 60
          MAS EGRR HHDLVPLAAL+ REM++EKMEKP V  G AAQS+KGEDYFLIKTDCQRVPG
Sbjct: 1  MASGEGRRRHHDLVPLAALLKREMKSEKMEKPTVRVGHAAQSKKGEDYFLIKTDCQRVPG 60

Query: 61 NPSSTFSVFA 70
          N SS+FSVFA
Sbjct: 61 NSSSSFSVFA 70

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536290|ref|XP_003536672.1| PREDICTED: probable protein phosphatase 2C 15-like [Glycine max]

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 56/70 (80%), Positives = 62/70 (88%)

Query: 1  MASREGRRHHHDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPG 60
          MAS EGRR HHDLVPLAAL+ REM++EKMEKP V  G AAQS+KGEDYFLIKTDCQRVPG
Sbjct: 1  MASGEGRRRHHDLVPLAALLKREMKSEKMEKPTVRVGHAAQSKKGEDYFLIKTDCQRVPG 60

Query: 61 NPSSTFSVFA 70
          N SS+FSV+A
Sbjct: 61 NSSSSFSVYA 70

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424053|ref|XP_002279675.1| PREDICTED: probable protein phosphatase 2C 15 [Vitis vinifera] gi|297737782|emb|CBI26983.3| unnamed protein product [Vitis vinifera]

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 63/70 (90%), Gaps = 1/70 (1%)

Query: 1  MASREGRRHHHDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPG 60
          MAS EGRRH + LVPLAALI+REMR+EKMEKP V +G AAQSRKGEDYFL+KTDCQR+PG
Sbjct: 1  MASGEGRRHRN-LVPLAALINREMRSEKMEKPTVRYGCAAQSRKGEDYFLMKTDCQRIPG 59

Query: 61 NPSSTFSVFA 70
          N SSTFSVFA
Sbjct: 60 NSSSTFSVFA 69

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572140|ref|XP_002527010.1| protein phosphatase, putative [Ricinus communis] gi|223533645|gb|EEF35382.1| protein phosphatase, putative [Ricinus communis]

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 58/70 (82%), Positives = 60/70 (85%)

Query: 1  MASREGRRHHHDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPG 60
          MAS EGR    +LVPLAALISREM+NEKMEKP V  G AAQSRKGEDYFLIKTDCQRVPG
Sbjct: 1  MASGEGRCRRDNLVPLAALISREMKNEKMEKPTVRCGSAAQSRKGEDYFLIKTDCQRVPG 60

Query: 61 NPSSTFSVFA 70
          N SSTFSVFA
Sbjct: 61 NSSSTFSVFA 70

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147769927|emb|CAN76446.1| hypothetical protein VITISV_010117 [Vitis vinifera]

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 63/70 (90%), Gaps = 1/70 (1%)

Query: 1  MASREGRRHHHDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPG 60
          MAS EGRRH  +LVPLAALI+REMR+EKMEKP V +G AAQSRKGEDYFL+KTDCQR+PG
Sbjct: 1  MASGEGRRHR-NLVPLAALINREMRSEKMEKPTVRYGCAAQSRKGEDYFLMKTDCQRIPG 59

Query: 61 NPSSTFSVFA 70
          N SSTFSVFA
Sbjct: 60 NSSSTFSVFA 69

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101763|ref|XP_002312412.1| predicted protein [Populus trichocarpa] gi|222852232|gb|EEE89779.1| predicted protein [Populus trichocarpa]

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/70 (78%), Positives = 59/70 (84%)

Query: 1  MASREGRRHHHDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPG 60
          M+S EGRR   +LVPLAALISREM  EKMEKP V +G AAQSRKGED+FLIK DCQRVPG
Sbjct: 1  MSSGEGRRRRDNLVPLAALISREMMIEKMEKPTVKYGHAAQSRKGEDHFLIKMDCQRVPG 60

Query: 61 NPSSTFSVFA 70
          N SSTFSVFA
Sbjct: 61 NSSSTFSVFA 70

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434598|ref|XP_004135083.1| PREDICTED: probable protein phosphatase 2C 15-like [Cucumis sativus] gi|449493442|ref|XP_004159290.1| PREDICTED: probable protein phosphatase 2C 15-like [Cucumis sativus]

 Score =  110 bits (276), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 58/74 (78%), Positives = 66/74 (89%), Gaps = 4/74 (5%)

Query: 1  MASREGRRHHHD----LVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQ 56
          MASREGRRHH+     LVPLAALIS+E+R+E++EKP V +G AAQSRKGEDYFL+KTDCQ
Sbjct: 1  MASREGRRHHNHRHHNLVPLAALISKEVRSERLEKPTVRYGNAAQSRKGEDYFLMKTDCQ 60

Query: 57 RVPGNPSSTFSVFA 70
          RVPGNPSSTFSVFA
Sbjct: 61 RVPGNPSSTFSVFA 74

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450661|ref|XP_002282985.1| PREDICTED: probable protein phosphatase 2C 5 [Vitis vinifera] gi|296089741|emb|CBI39560.3| unnamed protein product [Vitis vinifera]

 Score =  105 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 48/70 (68%), Positives = 57/70 (81%)

Query: 1  MASREGRRHHHDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPG 60
          M+  E  R    LVPLA LI RE+RNEK+EKP + +GQAA ++KGEDYFLIKTDCQRVPG
Sbjct: 1  MSETEVSRMKSSLVPLATLIGRELRNEKVEKPYIKYGQAALAKKGEDYFLIKTDCQRVPG 60

Query: 61 NPSSTFSVFA 70
          NPS++FSVFA
Sbjct: 61 NPSTSFSVFA 70

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147791475|emb|CAN74505.1| hypothetical protein VITISV_015889 [Vitis vinifera]

 Score =  105 bits (261), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 48/70 (68%), Positives = 57/70 (81%)

Query: 1  MASREGRRHHHDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPG 60
          M+  E  R    LVPLA LI RE+RNEK+EKP + +GQAA ++KGEDYFLIKTDCQRVPG
Sbjct: 1  MSETEVSRMKSSLVPLATLIGRELRNEKVEKPYIKYGQAALAKKGEDYFLIKTDCQRVPG 60

Query: 61 NPSSTFSVFA 70
          NPS++FSVFA
Sbjct: 61 NPSTSFSVFA 70

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	70
TAIR|locus:2202339	436	AT1G68410 [Arabidopsis thalian	1.0	0.160	0.733	1.5e-20
TAIR|locus:2195331	428	AT1G09160 [Arabidopsis thalian	0.985	0.161	0.666	3.9e-20
TAIR|locus:2203766	428	AT1G47380 [Arabidopsis thalian	0.842	0.137	0.542	4.2e-12

TAIR|locus:2202339 AT1G68410 [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 1.5e-20, P = 1.5e-20
 Identities = 55/75 (73%), Positives = 59/75 (78%)

Query:     1 MASREGRR--HHHD---LVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDC 55
             MASREG+R  H+HD   LVPLAALISRE +  KMEKP V FGQAAQSRKGEDY LIKTD 
Sbjct:     1 MASREGKRRNHNHDDEKLVPLAALISRETKAAKMEKPIVRFGQAAQSRKGEDYVLIKTDS 60

Query:    56 QRVPGNPSSTFSVFA 70
              RVP N S+ FSVFA
Sbjct:    61 LRVPSNSSTAFSVFA 75

GO:0003824 "catalytic activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2195331 AT1G09160 [Arabidopsis thaliana (taxid:3702)]

 Score = 243 (90.6 bits), Expect = 3.9e-20, P = 3.9e-20
 Identities = 46/69 (66%), Positives = 56/69 (81%)

Query:     1 MASREGRRHHHDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPG 60
             M+  +  R  H LVPLA LI RE+R+EK+EKP V +GQAA ++KGEDYFLIKTDC+RVPG
Sbjct:     1 MSVSKASRTQHSLVPLATLIGRELRSEKVEKPFVKYGQAALAKKGEDYFLIKTDCERVPG 60

Query:    61 NPSSTFSVF 69
             +PSS FSVF
Sbjct:    61 DPSSAFSVF 69

GO:0003824 "catalytic activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2203766 AT1G47380 [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 4.2e-12, P = 4.2e-12
 Identities = 32/59 (54%), Positives = 43/59 (72%)

Query:    11 HDLVPLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDCQRVPGNPSSTFSVF 69
             H  VPL+ L+ RE  NEK++ P +  GQ  QS+KGED+ L+KT+CQRV G+  +TFSVF
Sbjct:     7 HHTVPLSVLLKRESANEKIDNPELIHGQHNQSKKGEDFTLVKTECQRVMGDGVTTFSVF 65


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.131   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       70        70   0.00091  102 3  11 22  0.45    28
                                                     29  0.41    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  475 (51 KB)
  Total size of DFA:  86 KB (2066 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.55u 0.14s 8.69t   Elapsed:  00:00:00
  Total cpu time:  8.55u 0.14s 8.69t   Elapsed:  00:00:00
  Start:  Thu May  9 17:16:44 2013   End:  Thu May  9 17:16:44 2013

GO:0003824 "catalytic activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005829 "cytosol" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00030385001 SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (96 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00