Citrus Sinensis ID: 036840

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------
VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAANVLFYQSML
cccccccHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHcccccccEEEcccccccEEEEEEcccccEEEEEEEHHHHcccccHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHccccEEEcccccccccccHHHHccccEEEccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccc
ccccccccHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHccccccEEEEEccccccEEEEEEccccccEEEEEccccHHccccHHHHHHHHHHHHHccEEEEEEcccHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHccEEcccHHHHHHHHccccccccccHHHHHHccccccHHHHHHHHHHHHHccccEEEEEcHHHcEEEEEcccEEEEEccccccccccccccEEEEEccccccccccccccccccccEEEEEEccccEEEEEcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccc
VNYVLGGVARNVAECMSklgskpymiSALGLDMAGNILLEHwksaglstegirrqkdiDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLmvdanlsppaLAASCKiaaecnipvwfepvsvtksrRITSVVKYITVVSPNEDELVAMANALsgenmfrpidrnkhSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRiglrktkpygfsrdLYKTVTsrchssrysgamepaggsqffavhfpalpasVVRLTgagdclvggtlasissgldVMQSVAVDDAKTVYAAANVLFYQSML
vnyvlggvARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWfepvsvtksrritSVVKYitvvspnedELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSsmriglrktkpygfsrdlYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAANVLFYQSML
VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAANVLFYQSML
**YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSG**MF**********ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAANVLFY****
VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAANVLFYQS**
VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAANVLFYQSML
VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAANVLFYQ***
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VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAANVLFYQSML
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query327 2.2.26 [Sep-21-2011]
P30235313 Pseudouridine kinase OS=E N/A no 0.593 0.619 0.279 7e-14
P33020362 Uncharacterized sugar kin N/A no 0.590 0.533 0.270 7e-11
Q8R1Q9323 Ribokinase OS=Mus musculu yes no 0.599 0.606 0.255 3e-08
Q9H477322 Ribokinase OS=Homo sapien yes no 0.642 0.652 0.248 2e-06
Q54UQ4318 Probable ribokinase OS=Di no no 0.669 0.688 0.233 7e-05
P36945293 Ribokinase OS=Bacillus su yes no 0.461 0.515 0.205 0.0001
Q42896328 Fructokinase-2 OS=Solanum N/A no 0.547 0.545 0.282 0.0001
Q9USY1747 Pseudouridine-metabolizin yes no 0.844 0.369 0.241 0.0003
Q7XJ81328 Fructokinase-2 OS=Solanum N/A no 0.547 0.545 0.273 0.0005
Q9K6K1294 Ribokinase OS=Bacillus ha yes no 0.470 0.523 0.223 0.0006
>sp|P30235|PSUK_ECOLI Pseudouridine kinase OS=Escherichia coli (strain K12) GN=psuK PE=1 SV=2 Back     alignment and function desciption
 Score = 78.2 bits (191), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)

Query: 1   VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
           + +  GGV RN+A+ ++ LG+K +++SA+G D  G  LL     +G+  +        +T
Sbjct: 35  IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94

Query: 61  AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
           +   ++LD  GE+  A+  + +I   +T +++ Q    I  A V++ D N+S  ALA   
Sbjct: 95  SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWIL 153

Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
             AA  N+PV+ +PVS  K  ++   +  I  + PN  E   ++  ALSG      +   
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211

Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
            H                 + G+  +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
Catalyzes the phosphorylation of pseudouridine to pseudouridine 5'-phosphate (PsiMP).
Escherichia coli (strain K12) (taxid: 83333)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 8EC: 3
>sp|P33020|YEII_ECOLI Uncharacterized sugar kinase YeiI OS=Escherichia coli (strain K12) GN=yeiI PE=3 SV=2 Back     alignment and function description
>sp|Q8R1Q9|RBSK_MOUSE Ribokinase OS=Mus musculus GN=Rbks PE=1 SV=1 Back     alignment and function description
>sp|Q9H477|RBSK_HUMAN Ribokinase OS=Homo sapiens GN=RBKS PE=1 SV=1 Back     alignment and function description
>sp|Q54UQ4|RBSK_DICDI Probable ribokinase OS=Dictyostelium discoideum GN=rbsk PE=3 SV=2 Back     alignment and function description
>sp|P36945|RBSK_BACSU Ribokinase OS=Bacillus subtilis (strain 168) GN=rbsK PE=3 SV=2 Back     alignment and function description
>sp|Q42896|SCRK2_SOLLC Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=2 SV=2 Back     alignment and function description
>sp|Q9USY1|YOW5_SCHPO Pseudouridine-metabolizing bifunctional protein C1861.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1861.05 PE=3 SV=1 Back     alignment and function description
>sp|Q7XJ81|SCRK2_SOLHA Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=2 SV=1 Back     alignment and function description
>sp|Q9K6K1|RBSK_BACHD Ribokinase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=rbsK PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query327
255556101 1157 pentatricopeptide repeat-containing prot 0.938 0.265 0.678 1e-117
356576339390 PREDICTED: pseudouridine kinase-like [Gl 1.0 0.838 0.614 1e-116
225427804426 PREDICTED: pseudouridine kinase [Vitis v 1.0 0.767 0.626 1e-115
224080307384 predicted protein [Populus trichocarpa] 0.996 0.848 0.634 1e-114
357475207421 Sugar kinase, putative [Medicago truncat 1.0 0.776 0.609 1e-114
224080299381 predicted protein [Populus trichocarpa] 0.990 0.850 0.616 1e-107
449493040 1096 PREDICTED: putative pentatricopeptide re 0.990 0.295 0.555 1e-103
449461160 1096 PREDICTED: LOW QUALITY PROTEIN: putative 0.990 0.295 0.555 1e-102
13699076 509 unnamed protein product [Nicotiana tabac 0.966 0.620 0.565 5e-93
21536998376 unknown [Arabidopsis thaliana] 0.966 0.840 0.515 2e-92
>gi|255556101|ref|XP_002519085.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223541748|gb|EEF43296.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 211/311 (67%), Positives = 250/311 (80%), Gaps = 4/311 (1%)

Query: 1   VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
           V Y LGGVARN+AECMSKLG+KPYMISALG DMAGN+LLEHW SAGLSTEGI++ + I T
Sbjct: 73  VQYALGGVARNIAECMSKLGTKPYMISALGNDMAGNLLLEHWNSAGLSTEGIQKHQKIRT 132

Query: 61  AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
           AV+SNI D +GE+AA VA VE++EKFLTP+WI Q    ISSASVL+VDANL+PPAL ASC
Sbjct: 133 AVISNIFDAHGEVAAGVADVEAVEKFLTPEWILQCKCKISSASVLLVDANLTPPALEASC 192

Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRN- 179
           ++AAE NIPVWFEPVSV KS RI S+V  +T  SPNEDEL+AMANALS  ++F PIDR+ 
Sbjct: 193 QVAAEYNIPVWFEPVSVAKSTRIASIVSDVTFASPNEDELIAMANALSCASIFHPIDRDS 252

Query: 180 --KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGF 237
             K+S ESLFQ LKPAILVLLEKGI+ V +TLG++GV LCS E  +  R  L +TK YG+
Sbjct: 253 SKKYSTESLFQMLKPAILVLLEKGIKTVAVTLGANGVFLCSTE-PNFTRTRLERTKKYGY 311

Query: 238 SRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASIS 297
           +  LY  + S C SS++S A++  G S   AVHFP LPASVVRLTGAGDCLVGGTLAS+ 
Sbjct: 312 NGSLYDIIESSCPSSKFSDALQTQGSSHLLAVHFPTLPASVVRLTGAGDCLVGGTLASLC 371

Query: 298 SGLDVMQSVAV 308
           SGLD+MQS+AV
Sbjct: 372 SGLDIMQSMAV 382

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356576339|ref|XP_003556290.1| PREDICTED: pseudouridine kinase-like [Glycine max] Back     alignment and taxonomy information
>gi|225427804|ref|XP_002275430.1| PREDICTED: pseudouridine kinase [Vitis vinifera] gi|297744710|emb|CBI37972.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224080307|ref|XP_002306090.1| predicted protein [Populus trichocarpa] gi|222849054|gb|EEE86601.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357475207|ref|XP_003607889.1| Sugar kinase, putative [Medicago truncatula] gi|85719355|gb|ABC75360.1| Carbohydrate kinase, PfkB [Medicago truncatula] gi|355508944|gb|AES90086.1| Sugar kinase, putative [Medicago truncatula] Back     alignment and taxonomy information
>gi|224080299|ref|XP_002306088.1| predicted protein [Populus trichocarpa] gi|222849052|gb|EEE86599.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449493040|ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein At3g18840-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449461160|ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g18840-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|13699076|dbj|BAB41199.1| unnamed protein product [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|21536998|gb|AAM61339.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query327
TAIR|locus:2010187378 AT1G49350 [Arabidopsis thalian 0.920 0.796 0.558 8.9e-86
DICTYBASE|DDB_G0268118765 DDB_G0268118 "indigoidine synt 0.660 0.282 0.301 2.2e-30
ZFIN|ZDB-GENE-060421-6632700 zgc:136858 "zgc:136858" [Danio 0.672 0.314 0.317 8.7e-30
UNIPROTKB|P30235313 psuK [Escherichia coli K-12 (t 0.507 0.530 0.305 3.8e-17
UNIPROTKB|F1P1N5677 Gga.26687 "Uncharacterized pro 0.559 0.270 0.286 2e-14
FB|FBgn0031265700 CG2794 [Drosophila melanogaste 0.828 0.387 0.276 1.1e-13
WB|WBGene00020765651 T24C12.3 [Caenorhabditis elega 0.480 0.241 0.283 2.2e-13
TIGR_CMR|CHY_0076364 CHY_0076 "kinase, PfkB family" 0.489 0.439 0.313 1e-12
RGD|1310064323 Rbks "ribokinase" [Rattus norv 0.388 0.393 0.279 7.7e-10
UNIPROTKB|P33020362 yeiI "predicted kinase" [Esche 0.510 0.461 0.293 1e-09
TAIR|locus:2010187 AT1G49350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
 Identities = 173/310 (55%), Positives = 231/310 (74%)

Query:     1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
             V +  GGVARNVA+C+ KLG  P+MI  LGLD   N+LL+ WK   LS +GI R++DI T
Sbjct:    31 VLFAPGGVARNVADCIFKLGITPFMIGTLGLDGPANVLLKEWK---LSMKGILRREDIST 87

Query:    61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
              +VS + D NGE+AA VA V+++E FLTP+WI++F ++ISSA +LMVDANLS  AL ASC
Sbjct:    88 PIVSLVYDTNGEVAAGVAGVDAVENFLTPEWIQRFEYNISSARLLMVDANLSSLALEASC 147

Query:   121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPI--DR 178
             K+AAE ++PVWFEPVSVTKS+RI S+ KY+T+VSPN+DEL+AMANAL  +N+F P   D 
Sbjct:   148 KLAAESSVPVWFEPVSVTKSQRIASIAKYVTIVSPNQDELIAMANALCAKNLFHPFRSDE 207

Query:   179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFS 238
             NK S E +F+ LKPAILVLL+ G+++V++TLGS+G LLCSK    + +  L   + +  S
Sbjct:   208 NKLSIEDMFRALKPAILVLLKNGVKVVIVTLGSNGALLCSK---GNPKKALNIDRKFLRS 264

Query:   239 RDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISS 298
              +++K V S C  +R+S        S  FA+HFP +PA V +LTGAGDCLVGGT+AS+S 
Sbjct:   265 GEVFKRVQSVCSPNRFSELGSNRSPS-LFAMHFPTIPAKVKKLTGAGDCLVGGTVASLSD 323

Query:   299 GLDVMQSVAV 308
             GLD++QS+AV
Sbjct:   324 GLDLIQSLAV 333
GO:0004747 "ribokinase activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006014 "D-ribose metabolic process" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA
DICTYBASE|DDB_G0268118 DDB_G0268118 "indigoidine synthase A like protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060421-6632 zgc:136858 "zgc:136858" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P30235 psuK [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|F1P1N5 Gga.26687 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
FB|FBgn0031265 CG2794 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00020765 T24C12.3 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0076 CHY_0076 "kinase, PfkB family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
RGD|1310064 Rbks "ribokinase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P33020 yeiI "predicted kinase" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00035982001
SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (378 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00017290001
SubName- Full=Chromosome chr6 scaffold_15, whole genome shotgun sequence; (329 aa)
•••     0.750

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query327
cd01941288 cd01941, YeiC_kinase_like, YeiC-like sugar kinase 3e-57
TIGR02152293 TIGR02152, D_ribokin_bact, ribokinase 1e-23
COG0524311 COG0524, RbsK, Sugar kinases, ribokinase family [C 2e-23
pfam00294298 pfam00294, PfkB, pfkB family carbohydrate kinase 7e-23
cd01174292 cd01174, ribokinase, Ribokinase catalyses the phos 3e-22
PRK09850313 PRK09850, PRK09850, pseudouridine kinase; Provisio 7e-15
PRK09954362 PRK09954, PRK09954, putative kinase; Provisional 1e-14
cd01167295 cd01167, bac_FRK, Fructokinases (FRKs) mainly from 7e-14
PTZ00292326 PTZ00292, PTZ00292, ribokinase; Provisional 2e-12
cd01166294 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (Kdg 1e-08
PRK11142306 PRK11142, PRK11142, ribokinase; Provisional 3e-07
COG1105310 COG1105, FruK, Fructose-1-phosphate kinase and rel 4e-07
cd01942279 cd01942, ribokinase_group_A, Ribokinase-like subgr 1e-06
cd01164289 cd01164, FruK_PfkB_like, 1-phosphofructokinase (Fr 2e-06
cd01168312 cd01168, adenosine_kinase, Adenosine kinase (AK) c 4e-06
TIGR02198315 TIGR02198, rfaE_dom_I, rfaE bifunctional protein, 6e-06
cd00287196 cd00287, ribokinase_pfkB_like, ribokinase/pfkB sup 2e-05
cd01945284 cd01945, ribokinase_group_B, Ribokinase-like subgr 7e-05
cd01172304 cd01172, RfaE_like, RfaE encodes a bifunctional AD 2e-04
PRK09434304 PRK09434, PRK09434, aminoimidazole riboside kinase 5e-04
TIGR03168303 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructoki 0.003
>gnl|CDD|238916 cd01941, YeiC_kinase_like, YeiC-like sugar kinase Back     alignment and domain information 
 Score =  186 bits (474), Expect = 3e-57
 Identities = 92/304 (30%), Positives = 140/304 (46%), Gaps = 62/304 (20%)

Query: 6   GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
           GGV RN+AE +++LG    ++SA+G D  G  +LE  + AGL+  GI  +    TA  + 
Sbjct: 35  GGVGRNIAENLARLGVSVALLSAVGDDSEGESILEESEKAGLNVRGIVFE-GRSTASYTA 93

Query: 66  ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
           ILD +G+L  A+A ++  E  LTPD++R+    +  A  ++VDANL   AL     +AA+
Sbjct: 94  ILDKDGDLVVALADMDIYEL-LTPDFLRKIREALKEAKPIVVDANLPEEALEYLLALAAK 152

Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
             +PV FEP S  K +++  ++  I +++PN  EL A+A AL   N              
Sbjct: 153 HGVPVAFEPTSAPKLKKLFYLLHAIDLLTPNRAELEALAGALIENNEDENKAAKIL---- 208

Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
                       L  GI+ V++TLG+ GVLL S+E     +                   
Sbjct: 209 ------------LLPGIKNVIVTLGAKGVLLSSREGGVETK------------------- 237

Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPA-LPASVVRLTGAGDCLVGGTLASISSGLDVMQ 304
                                    FPA  P +VV +TGAGD  V G +A +  G+ +  
Sbjct: 238 ------------------------LFPAPQPETVVNVTGAGDAFVAGLVAGLLEGMSLDD 273

Query: 305 SVAV 308
           S+  
Sbjct: 274 SLRF 277

Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 288
>gnl|CDD|233751 TIGR02152, D_ribokin_bact, ribokinase Back     alignment and domain information
>gnl|CDD|223598 COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|215842 pfam00294, PfkB, pfkB family carbohydrate kinase Back     alignment and domain information
>gnl|CDD|238579 cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP Back     alignment and domain information
>gnl|CDD|182111 PRK09850, PRK09850, pseudouridine kinase; Provisional Back     alignment and domain information
>gnl|CDD|182165 PRK09954, PRK09954, putative kinase; Provisional Back     alignment and domain information
>gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate Back     alignment and domain information
>gnl|CDD|185541 PTZ00292, PTZ00292, ribokinase; Provisional Back     alignment and domain information
>gnl|CDD|238571 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) Back     alignment and domain information
>gnl|CDD|236858 PRK11142, PRK11142, ribokinase; Provisional Back     alignment and domain information
>gnl|CDD|224030 COG1105, FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|238917 cd01942, ribokinase_group_A, Ribokinase-like subgroup A Back     alignment and domain information
>gnl|CDD|238570 cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases Back     alignment and domain information
>gnl|CDD|238573 cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor Back     alignment and domain information
>gnl|CDD|233776 TIGR02198, rfaE_dom_I, rfaE bifunctional protein, domain I Back     alignment and domain information
>gnl|CDD|238177 cd00287, ribokinase_pfkB_like, ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group Back     alignment and domain information
>gnl|CDD|238920 cd01945, ribokinase_group_B, Ribokinase-like subgroup B Back     alignment and domain information
>gnl|CDD|238577 cd01172, RfaE_like, RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose Back     alignment and domain information
>gnl|CDD|236514 PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional Back     alignment and domain information
>gnl|CDD|234133 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 327
PRK11142306 ribokinase; Provisional 100.0
PRK09850313 pseudouridine kinase; Provisional 100.0
cd01174292 ribokinase Ribokinase catalyses the phosphorylatio 100.0
PTZ00292326 ribokinase; Provisional 100.0
PRK09954362 putative kinase; Provisional 100.0
cd01168312 adenosine_kinase Adenosine kinase (AK) catalyzes t 100.0
TIGR02152293 D_ribokin_bact ribokinase. This model describes ri 100.0
cd01166294 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho 100.0
PLN02967581 kinase 100.0
cd01941288 YeiC_kinase_like YeiC-like sugar kinase. Found in 100.0
PTZ00247345 adenosine kinase; Provisional 100.0
PRK15074434 inosine/guanosine kinase; Provisional 100.0
cd01940264 Fructoselysine_kinase_like Fructoselysine kinase-l 100.0
PLN02323330 probable fructokinase 100.0
cd01167295 bac_FRK Fructokinases (FRKs) mainly from bacteria 100.0
PRK09434304 aminoimidazole riboside kinase; Provisional 100.0
PLN02341470 pfkB-type carbohydrate kinase family protein 100.0
PLN02543496 pfkB-type carbohydrate kinase family protein 100.0
TIGR01231309 lacC tagatose-6-phosphate kinase. This enzyme is p 100.0
cd01944289 YegV_kinase_like YegV-like sugar kinase. Found onl 100.0
PLN02379367 pfkB-type carbohydrate kinase family protein 100.0
COG0524311 RbsK Sugar kinases, ribokinase family [Carbohydrat 100.0
PLN02813426 pfkB-type carbohydrate kinase family protein 100.0
PRK13508309 tagatose-6-phosphate kinase; Provisional 100.0
cd01945284 ribokinase_group_B Ribokinase-like subgroup B. Fou 100.0
PF00294301 PfkB: pfkB family carbohydrate kinase; InterPro: I 100.0
cd01172304 RfaE_like RfaE encodes a bifunctional ADP-heptose 100.0
cd01164289 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 100.0
TIGR03828304 pfkB 1-phosphofructokinase. This enzyme acts in co 100.0
TIGR02198315 rfaE_dom_I rfaE bifunctional protein, domain I. Rf 100.0
cd01942279 ribokinase_group_A Ribokinase-like subgroup A. Fou 100.0
cd01939290 Ketohexokinase Ketohexokinase (fructokinase, KHK) 100.0
cd01947265 Guanosine_kinase_like Guanosine kinase-like sugar 100.0
PRK09813260 fructoselysine 6-kinase; Provisional 100.0
PRK10294309 6-phosphofructokinase 2; Provisional 100.0
TIGR03168303 1-PFK hexose kinase, 1-phosphofructokinase family. 100.0
PLN02548332 adenosine kinase 100.0
PRK09513312 fruK 1-phosphofructokinase; Provisional 100.0
cd01943328 MAK32 MAK32 kinase. MAK32 is a protein found prima 100.0
KOG2855330 consensus Ribokinase [Carbohydrate transport and m 100.0
COG1105310 FruK Fructose-1-phosphate kinase and related fruct 100.0
PRK11316 473 bifunctional heptose 7-phosphate kinase/heptose 1- 100.0
cd01946277 ribokinase_group_C Ribokinase-like subgroup C. Fou 100.0
cd01937254 ribokinase_group_D Ribokinase-like subgroup D. Fou 99.97
PLN02630335 pfkB-type carbohydrate kinase family protein 99.97
KOG2854343 consensus Possible pfkB family carbohydrate kinase 99.96
COG2870 467 RfaE ADP-heptose synthase, bifunctional sugar kina 99.94
KOG2947308 consensus Carbohydrate kinase [Carbohydrate transp 99.91
cd00287196 ribokinase_pfkB_like ribokinase/pfkB superfamily: 99.91
PRK12412268 pyridoxal kinase; Reviewed 99.75
PRK12413253 phosphomethylpyrimidine kinase; Provisional 99.74
TIGR00687286 pyridox_kin pyridoxal kinase. ThiD and related pro 99.72
TIGR00097254 HMP-P_kinase phosphomethylpyrimidine kinase. This 99.7
cd01173254 pyridoxal_pyridoxamine_kinase Pyridoxal kinase pla 99.7
cd01169242 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrim 99.7
PRK05756286 pyridoxamine kinase; Validated 99.69
PRK08573 448 phosphomethylpyrimidine kinase; Provisional 99.68
PRK06427266 bifunctional hydroxy-methylpyrimidine kinase/ hydr 99.68
PRK07105284 pyridoxamine kinase; Validated 99.64
PRK08176281 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy 99.63
PRK12616270 pyridoxal kinase; Reviewed 99.62
KOG3009614 consensus Predicted carbohydrate kinase, contains 99.51
cd01171254 YXKO-related B.subtilis YXKO protein of unknown fu 99.48
PLN02898 502 HMP-P kinase/thiamin-monophosphate pyrophosphoryla 99.45
PTZ00344296 pyridoxal kinase; Provisional 99.43
PTZ00347504 phosphomethylpyrimidine kinase; Provisional 99.43
PRK09517 755 multifunctional thiamine-phosphate pyrophosphoryla 99.35
PF08543246 Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte 99.34
TIGR00196272 yjeF_cterm yjeF C-terminal region, hydroxyethylthi 99.3
PRK14713 530 multifunctional hydroxymethylpyrimidine phosphokin 99.29
PLN02978308 pyridoxal kinase 99.22
COG0351263 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidi 99.22
cd01170242 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T 99.15
COG2240281 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe 99.04
PTZ00493321 phosphomethylpyrimidine kinase; Provisional 98.87
PRK09355263 hydroxyethylthiazole kinase; Validated 98.69
TIGR00694249 thiM hydroxyethylthiazole kinase. This model repre 98.48
KOG2598 523 consensus Phosphomethylpyrimidine kinase [Coenzyme 98.47
PRK14039453 ADP-dependent glucokinase; Provisional 98.47
PRK03979463 ADP-specific phosphofructokinase; Provisional 98.38
TIGR02045446 P_fruct_ADP ADP-specific phosphofructokinase. Phos 98.38
PRK14038453 ADP-dependent glucokinase; Provisional 98.07
KOG2599308 consensus Pyridoxal/pyridoxine/pyridoxamine kinase 98.06
PF04587444 ADP_PFK_GK: ADP-specific Phosphofructokinase/Gluco 97.83
PRK10565508 putative carbohydrate kinase; Provisional 97.52
cd01938445 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and 97.5
PF02110246 HK: Hydroxyethylthiazole kinase family; InterPro: 97.49
PF01256242 Carb_kinase: Carbohydrate kinase; InterPro: IPR000 96.97
COG2145265 ThiM Hydroxyethylthiazole kinase, sugar kinase fam 96.92
COG4809466 Archaeal ADP-dependent phosphofructokinase/glucoki 95.89
KOG3974306 consensus Predicted sugar kinase [Carbohydrate tra 94.62
KOG4184478 consensus Predicted sugar kinase [Carbohydrate tra 94.33
COG0063284 Predicted sugar kinase [Carbohydrate transport and 93.95
PRK10076213 pyruvate formate lyase II activase; Provisional 88.89
COG1180260 PflA Pyruvate-formate lyase-activating enzyme [Pos 83.72
>PRK11142 ribokinase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=9.4e-39  Score=297.91  Aligned_cols=253  Identities=22%  Similarity=0.336  Sum_probs=216.0

Q ss_pred             ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840            2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE   81 (327)
Q Consensus         2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~   81 (327)
                      +..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++...++.+|+.++++++++|+|++.+..  
T Consensus        35 ~~~~GG~~~Nva~~la~lG~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~i~~~~~~~t~~~~~~~~~~g~r~~~~~~--  112 (306)
T PRK11142         35 QVAFGGKGANQAVAAARLGADIAFIACVGDDSIGESMRQQLAKDGIDTAPVSVIKGESTGVALIFVNDEGENSIGIHA--  112 (306)
T ss_pred             eecCCCcHHHHHHHHHhcCCcEEEEEEECCChhHHHHHHHHHHcCCChhhEEEcCCCCCCEEEEEECCCCCEEEEEeC--
Confidence            457899999999999999999999999999999999999999999999999888888999999999988999876653  


Q ss_pred             hhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHHHH
Q 036840           82 SIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELV  161 (327)
Q Consensus        82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~  161 (327)
                      .....+++++++.+.+.+++++++|+++..+.+.+..+++.+++.++++++|++...  .....+++++|++++|++|+.
T Consensus       113 ~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~--~~~~~~~~~~dil~~n~~Ea~  190 (306)
T PRK11142        113 GANAALTPALVEAHRELIANADALLMQLETPLETVLAAAKIAKQHGTKVILNPAPAR--ELPDELLALVDIITPNETEAE  190 (306)
T ss_pred             CccccCCHHHHHHHHhhhccCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEEECCCCc--ccCHHHHhhCCEEcCCHHHHH
Confidence            234568888887666778999999999877778888999999999999999997532  223568899999999999999


Q ss_pred             HHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCcccc
Q 036840          162 AMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL  241 (327)
Q Consensus       162 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (327)
                      .+++...            .+.++    ..++++.+.+.|++.+|||+|++|++++.+++                    
T Consensus       191 ~l~g~~~------------~~~~~----~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~--------------------  234 (306)
T PRK11142        191 KLTGIRV------------EDDDD----AAKAAQVLHQKGIETVLITLGSRGVWLSENGE--------------------  234 (306)
T ss_pred             HHhCCCC------------CChHH----HHHHHHHHHHhCCCeEEEEECCCcEEEEeCCc--------------------
Confidence            8876411            11111    24556777778999999999999999876543                    


Q ss_pred             cccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHHHHHHH
Q 036840          242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAANV  320 (327)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~~~~~~  320 (327)
                                                .+++|+++++++|||||||+|+|||++++++|+++++|+++|+++++++++..
T Consensus       235 --------------------------~~~~~~~~v~vvDt~GAGDaF~Agfi~~l~~g~~~~~al~~a~~~Aa~~~~~~  287 (306)
T PRK11142        235 --------------------------GQRVPGFRVQAVDTIAAGDTFNGALVTALLEGKPLPEAIRFAHAAAAIAVTRK  287 (306)
T ss_pred             --------------------------ceeccCCCcccccCCCchhHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCC
Confidence                                      67889988999999999999999999999999999999999999999988753

>PRK09850 pseudouridine kinase; Provisional Back     alignment and domain information
>cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP Back     alignment and domain information
>PTZ00292 ribokinase; Provisional Back     alignment and domain information
>PRK09954 putative kinase; Provisional Back     alignment and domain information
>cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor Back     alignment and domain information
>TIGR02152 D_ribokin_bact ribokinase Back     alignment and domain information
>cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) Back     alignment and domain information
>PLN02967 kinase Back     alignment and domain information
>cd01941 YeiC_kinase_like YeiC-like sugar kinase Back     alignment and domain information
>PTZ00247 adenosine kinase; Provisional Back     alignment and domain information
>PRK15074 inosine/guanosine kinase; Provisional Back     alignment and domain information
>cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like Back     alignment and domain information
>PLN02323 probable fructokinase Back     alignment and domain information
>cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate Back     alignment and domain information
>PRK09434 aminoimidazole riboside kinase; Provisional Back     alignment and domain information
>PLN02341 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>PLN02543 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>TIGR01231 lacC tagatose-6-phosphate kinase Back     alignment and domain information
>cd01944 YegV_kinase_like YegV-like sugar kinase Back     alignment and domain information
>PLN02379 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02813 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>PRK13508 tagatose-6-phosphate kinase; Provisional Back     alignment and domain information
>cd01945 ribokinase_group_B Ribokinase-like subgroup B Back     alignment and domain information
>PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases Back     alignment and domain information
>cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose Back     alignment and domain information
>cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases Back     alignment and domain information
>TIGR03828 pfkB 1-phosphofructokinase Back     alignment and domain information
>TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I Back     alignment and domain information
>cd01942 ribokinase_group_A Ribokinase-like subgroup A Back     alignment and domain information
>cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose Back     alignment and domain information
>cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases Back     alignment and domain information
>PRK09813 fructoselysine 6-kinase; Provisional Back     alignment and domain information
>PRK10294 6-phosphofructokinase 2; Provisional Back     alignment and domain information
>TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family Back     alignment and domain information
>PLN02548 adenosine kinase Back     alignment and domain information
>PRK09513 fruK 1-phosphofructokinase; Provisional Back     alignment and domain information
>cd01943 MAK32 MAK32 kinase Back     alignment and domain information
>KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional Back     alignment and domain information
>cd01946 ribokinase_group_C Ribokinase-like subgroup C Back     alignment and domain information
>cd01937 ribokinase_group_D Ribokinase-like subgroup D Back     alignment and domain information
>PLN02630 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group Back     alignment and domain information
>PRK12412 pyridoxal kinase; Reviewed Back     alignment and domain information
>PRK12413 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>TIGR00687 pyridox_kin pyridoxal kinase Back     alignment and domain information
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase Back     alignment and domain information
>cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP Back     alignment and domain information
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1 Back     alignment and domain information
>PRK05756 pyridoxamine kinase; Validated Back     alignment and domain information
>PRK08573 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed Back     alignment and domain information
>PRK07105 pyridoxamine kinase; Validated Back     alignment and domain information
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed Back     alignment and domain information
>PRK12616 pyridoxal kinase; Reviewed Back     alignment and domain information
>KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only] Back     alignment and domain information
>cd01171 YXKO-related B Back     alignment and domain information
>PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase Back     alignment and domain information
>PTZ00344 pyridoxal kinase; Provisional Back     alignment and domain information
>PTZ00347 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2 Back     alignment and domain information
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related Back     alignment and domain information
>PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional Back     alignment and domain information
>PLN02978 pyridoxal kinase Back     alignment and domain information
>COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] Back     alignment and domain information
>cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz Back     alignment and domain information
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] Back     alignment and domain information
>PTZ00493 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PRK09355 hydroxyethylthiazole kinase; Validated Back     alignment and domain information
>TIGR00694 thiM hydroxyethylthiazole kinase Back     alignment and domain information
>KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription] Back     alignment and domain information
>PRK14039 ADP-dependent glucokinase; Provisional Back     alignment and domain information
>PRK03979 ADP-specific phosphofructokinase; Provisional Back     alignment and domain information
>TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase Back     alignment and domain information
>PRK14038 ADP-dependent glucokinase; Provisional Back     alignment and domain information
>KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism] Back     alignment and domain information
>PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ] Back     alignment and domain information
>PRK10565 putative carbohydrate kinase; Provisional Back     alignment and domain information
>cd01938 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and phosphofructokinase (ADPPFK) Back     alignment and domain information
>PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium [] Back     alignment and domain information
>PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase Back     alignment and domain information
>COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism] Back     alignment and domain information
>COG4809 Archaeal ADP-dependent phosphofructokinase/glucokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4184 consensus Predicted sugar kinase [Carbohydrate transport and metabolism; General function prediction only] Back     alignment and domain information
>COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10076 pyruvate formate lyase II activase; Provisional Back     alignment and domain information
>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query327
3kzh_A328 Crystal Structure Of A Putative Sugar Kinase From C 6e-08
2fv7_A331 Crystal Structure Of Human Ribokinase Length = 331 2e-07
2nwh_A317 Carbohydrate Kinase From Agrobacterium Tumefaciens 3e-07
3hj6_A327 Structure Of Halothermothrix Orenii Fructokinase (F 3e-06
1vm7_A311 Crystal Structure Of Ribokinase (Tm0960) From Therm 1e-05
1tyy_A339 Crystal Structure Of Aminoimidazole Riboside Kinase 2e-05
1tz6_A339 Crystal Structure Of Aminoimidazole Riboside Kinase 2e-05
3h49_A325 Crystal Structure Of A Putative Ribokinase (Apo For 2e-04
3ljs_A338 Crystal Structure Of Fructokinase From Xylella Fast 3e-04
1rk2_A309 E. Coli Ribokinase Complexed With Ribose And Adp, S 6e-04
>pdb|3KZH|A Chain A, Crystal Structure Of A Putative Sugar Kinase From Clostridium Perfringens Length = 328 Back     alignment and structure 
Iteration: 1

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 19/211 (9%)
Query: 5   LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
            GGV RN+AE  +++G      S LG D  G  ++EH K  G   +     +   T    
Sbjct: 41  FGGVCRNIAENXARVGVNTNFXSILGNDEHGKSIVEHSKKIGYHXDDSXVIEGGSTPTYL 100
Query: 65  NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
            ILD NGE  +A+A  +SI    T D+I        +A   ++D++   P +        
Sbjct: 101 AILDENGEXVSAIADXKSIGAXNT-DFIDSKREIFENAEYTVLDSD--NPEIXEYLLKNF 157
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
           +       +PVS  K+  +  ++K    + PN  E    A  L+G   F   D +     
Sbjct: 158 KDKTNFILDPVSAEKASWVKHLIKDFHTIKPNRHE----AEILAG---FPITDTDD---- 206
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
                L  A    L  GI+ V ++L +DG+ 
Sbjct: 207 -----LIKASNYFLGLGIKKVFISLDADGIF 232
>pdb|2FV7|A Chain A, Crystal Structure Of Human Ribokinase Length = 331 Back     alignment and structure
>pdb|2NWH|A Chain A, Carbohydrate Kinase From Agrobacterium Tumefaciens Length = 317 Back     alignment and structure
>pdb|3HJ6|A Chain A, Structure Of Halothermothrix Orenii Fructokinase (Frk) Length = 327 Back     alignment and structure
>pdb|1VM7|A Chain A, Crystal Structure Of Ribokinase (Tm0960) From Thermotoga Maritima At 2.15 A Resolution Length = 311 Back     alignment and structure
>pdb|1TYY|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Length = 339 Back     alignment and structure
>pdb|1TZ6|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Complexed With Aminoimidazole Riboside And Atp Analog Length = 339 Back     alignment and structure
>pdb|3H49|A Chain A, Crystal Structure Of A Putative Ribokinase (Apo Form) From E.Coli At 1.8a Resolution Length = 325 Back     alignment and structure
>pdb|3LJS|A Chain A, Crystal Structure Of Fructokinase From Xylella Fastidiosa Length = 338 Back     alignment and structure
>pdb|1RK2|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 Length = 309 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query327
3kzh_A328 Probable sugar kinase; NYSGXRC, PSI-II, protein st 2e-44
2nwh_A317 AGR_C_3442P, carbohydrate kinase; structural genom 3e-38
3h49_A325 Ribokinase; transferase,PFKB family,sugar kinase Y 9e-23
3ry7_A304 Ribokinase; transferase; 2.15A {Staphylococcus aur 8e-21
1rkd_A309 Ribokinase; carbohydrate kinase, ribose, nucleotid 8e-21
2pkf_A334 Adenosine kinase; transferase, S genomics, TB stru 9e-21
3kd6_A313 Carbohydrate kinase, PFKB family; nucleoside kinas 5e-20
2c4e_A302 Sugar kinase MJ0406; transferase, nucleoside kinas 2e-19
2fv7_A331 Ribokinase; structural genomics, structural genomi 5e-19
2rbc_A343 Sugar kinase, AGR_C_4560P; ribokinase family, ATP- 1e-18
3iq0_A330 Putative ribokinase II; transferase,kinase,SAD,rib 2e-18
3b1n_A326 Ribokinase, putative; rossmann fold, ATP binding, 2e-18
2qhp_A296 Fructokinase; NP_810670.1, PFKB family carbohydrat 1e-17
1tyy_A339 Putative sugar kinase; ribokinase fold, alpha/beta 5e-17
2hlz_A312 Ketohexokinase; non-protein kinase, creatine kinas 2e-16
3pl2_A319 Sugar kinase, ribokinase family; PFKB PFAM motif, 2e-16
3ljs_A338 Fructokinase; fructokianse, PSI2, NYSGXRC, structu 4e-16
3hj6_A327 Fructokinase, FRK; fructose, transferase, carbohyd 3e-15
1vk4_A298 PFKB carbohydrate kinase TM0415; structural genomi 3e-15
3bf5_A306 Ribokinase related protein; 10640157, putative rib 4e-15
3lhx_A319 Ketodeoxygluconokinase; structural genomics, PSI-2 5e-15
3ikh_A299 Carbohydrate kinase; transferase,kinase,SAD,ribose 5e-15
2v78_A313 Fructokinase; transferase, PFKB family carbohydrat 9e-15
2dcn_A311 Hypothetical fructokinase; 2-keto-3-deoxygluconate 4e-14
2qcv_A332 Putative 5-dehydro-2-deoxygluconokinase; structura 5e-14
1vm7_A311 Ribokinase; TM0960, structural genomics, JCSG, pro 7e-14
4du5_A336 PFKB; structural genomics, PSI-biology, NEW YORK s 1e-13
1v1a_A309 2-keto-3-deoxygluconate kinase; ATP, structural ge 7e-13
3ewm_A313 Uncharacterized sugar kinase PH1459; carbohydrate 9e-13
4e69_A328 2-dehydro-3-deoxygluconokinase; putative sugar kin 1e-12
3ktn_A346 Carbohydrate kinase, PFKB family; PFKB family,ribo 4e-12
3go6_A310 Ribokinase RBSK; phosphofructokinase, carbohydrate 4e-10
3otx_A347 Adenosine kinase, putative; AP5A, transferase-tran 4e-09
3loo_A365 Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad 4e-09
1bx4_A345 Protein (adenosine kinase); human adenosine kinase 8e-09
2afb_A351 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- 8e-09
2abs_A383 Adenosine kinase, AK; ribokinase fold, alpha/beta, 1e-07
2jg1_A330 Tagatose-6-phosphate kinase; phosphoryl transfer, 3e-06
2f02_A323 Tagatose-6-phosphate kinase; LACC, structural geno 1e-05
3ie7_A320 LIN2199 protein; phosphofructokinases, transferase 2e-05
2jg5_A306 Fructose 1-phosphate kinase; 1-phosphofructokinase 2e-05
2abq_A306 Fructose 1-phosphate kinase; dimer, structural gen 3e-05
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Length = 328 Back     alignment and structure
 Score =  153 bits (389), Expect = 2e-44
 Identities = 64/306 (20%), Positives = 104/306 (33%), Gaps = 65/306 (21%)

Query: 1   VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
           V    GGV RN+AE M+++G     +S LG D  G  ++EH K  G   +     +   T
Sbjct: 37  VKISFGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGST 96

Query: 61  AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
                ILD NGE+ +A+A ++     +  D+I        +A   ++D++          
Sbjct: 97  PTYLAILDENGEMVSAIADMK-SIGAMNTDFIDSKREIFENAEYTVLDSDNPEIMEYL-- 153

Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
               +       +PVS  K+  +  ++K    + PN  E    A  L+G     PI    
Sbjct: 154 LKNFKDKTNFILDPVSAEKASWVKHLIKDFHTIKPNRHE----AEILAG----FPIT--- 202

Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
              + L +    A    L  GI+ V ++L +DG+                          
Sbjct: 203 -DTDDLIK----ASNYFLGLGIKKVFISLDADGIFYNDGV-------------------- 237

Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGL 300
                                           A    V  +TGAGD  V G      + +
Sbjct: 238 --------------------------SCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKM 271

Query: 301 DVMQSV 306
            +   V
Sbjct: 272 PIEDIV 277
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Length = 317 Back     alignment and structure
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Length = 325 Back     alignment and structure
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Length = 304 Back     alignment and structure
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Length = 309 Back     alignment and structure
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Length = 334 Back     alignment and structure
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Length = 313 Back     alignment and structure
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Length = 302 Back     alignment and structure
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Length = 331 Back     alignment and structure
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Length = 343 Back     alignment and structure
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330 Back     alignment and structure
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Length = 326 Back     alignment and structure
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Length = 296 Back     alignment and structure
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339 Back     alignment and structure
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Length = 312 Back     alignment and structure
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} Length = 319 Back     alignment and structure
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338 Back     alignment and structure
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327 Back     alignment and structure
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Length = 298 Back     alignment and structure
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Length = 306 Back     alignment and structure
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Length = 319 Back     alignment and structure
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Length = 299 Back     alignment and structure
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Length = 313 Back     alignment and structure
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Length = 311 Back     alignment and structure
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332 Back     alignment and structure
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Length = 311 Back     alignment and structure
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Length = 336 Back     alignment and structure
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309 Back     alignment and structure
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Length = 313 Back     alignment and structure
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Length = 328 Back     alignment and structure
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346 Back     alignment and structure
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Length = 310 Back     alignment and structure
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Length = 347 Back     alignment and structure
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Length = 365 Back     alignment and structure
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Length = 345 Back     alignment and structure
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351 Back     alignment and structure
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Length = 383 Back     alignment and structure
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Length = 330 Back     alignment and structure
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Length = 323 Back     alignment and structure
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Length = 320 Back     alignment and structure
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Length = 306 Back     alignment and structure
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Length = 306 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query327
3kzh_A328 Probable sugar kinase; NYSGXRC, PSI-II, protein st 100.0
3ry7_A304 Ribokinase; transferase; 2.15A {Staphylococcus aur 100.0
2nwh_A317 AGR_C_3442P, carbohydrate kinase; structural genom 100.0
1rkd_A309 Ribokinase; carbohydrate kinase, ribose, nucleotid 100.0
3iq0_A330 Putative ribokinase II; transferase,kinase,SAD,rib 100.0
2fv7_A331 Ribokinase; structural genomics, structural genomi 100.0
3ljs_A338 Fructokinase; fructokianse, PSI2, NYSGXRC, structu 100.0
3lhx_A319 Ketodeoxygluconokinase; structural genomics, PSI-2 100.0
3vas_A370 Putative adenosine kinase; ribokinase, enzyme, tra 100.0
4du5_A336 PFKB; structural genomics, PSI-biology, NEW YORK s 100.0
3otx_A347 Adenosine kinase, putative; AP5A, transferase-tran 100.0
3pl2_A319 Sugar kinase, ribokinase family; PFKB PFAM motif, 100.0
3h49_A325 Ribokinase; transferase,PFKB family,sugar kinase Y 100.0
4e69_A328 2-dehydro-3-deoxygluconokinase; putative sugar kin 100.0
3ikh_A299 Carbohydrate kinase; transferase,kinase,SAD,ribose 100.0
4e3a_A352 Sugar kinase protein; structural genomics, protein 100.0
2rbc_A343 Sugar kinase, AGR_C_4560P; ribokinase family, ATP- 100.0
3loo_A365 Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad 100.0
1v1a_A309 2-keto-3-deoxygluconate kinase; ATP, structural ge 100.0
2v78_A313 Fructokinase; transferase, PFKB family carbohydrat 100.0
2qcv_A332 Putative 5-dehydro-2-deoxygluconokinase; structura 100.0
3ktn_A346 Carbohydrate kinase, PFKB family; PFKB family,ribo 100.0
3uq6_A372 Adenosine kinase, putative; ribokinase, transferas 100.0
1vm7_A311 Ribokinase; TM0960, structural genomics, JCSG, pro 100.0
3hj6_A327 Fructokinase, FRK; fructose, transferase, carbohyd 100.0
2dcn_A311 Hypothetical fructokinase; 2-keto-3-deoxygluconate 100.0
4e84_A352 D-beta-D-heptose 7-phosphate kinase; LPS-heptose b 100.0
1tyy_A339 Putative sugar kinase; ribokinase fold, alpha/beta 100.0
2c4e_A302 Sugar kinase MJ0406; transferase, nucleoside kinas 100.0
1bx4_A345 Protein (adenosine kinase); human adenosine kinase 100.0
3umo_A309 6-phosphofructokinase isozyme 2; glycolysis, trans 100.0
2jg1_A330 Tagatose-6-phosphate kinase; phosphoryl transfer, 100.0
2abq_A306 Fructose 1-phosphate kinase; dimer, structural gen 100.0
2pkf_A334 Adenosine kinase; transferase, S genomics, TB stru 100.0
2qhp_A296 Fructokinase; NP_810670.1, PFKB family carbohydrat 100.0
3ie7_A320 LIN2199 protein; phosphofructokinases, transferase 100.0
3cqd_A309 6-phosphofructokinase isozyme 2; phosphofructokina 100.0
3go6_A310 Ribokinase RBSK; phosphofructokinase, carbohydrate 100.0
2ajr_A331 Sugar kinase, PFKB family; TM0828, possible 1-phos 100.0
3b1n_A326 Ribokinase, putative; rossmann fold, ATP binding, 100.0
2hlz_A312 Ketohexokinase; non-protein kinase, creatine kinas 100.0
2afb_A351 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- 100.0
2f02_A323 Tagatose-6-phosphate kinase; LACC, structural geno 100.0
2abs_A383 Adenosine kinase, AK; ribokinase fold, alpha/beta, 100.0
2jg5_A306 Fructose 1-phosphate kinase; 1-phosphofructokinase 100.0
3ewm_A313 Uncharacterized sugar kinase PH1459; carbohydrate 100.0
4gm6_A351 PFKB family carbohydrate kinase; enzyme function i 100.0
3kd6_A313 Carbohydrate kinase, PFKB family; nucleoside kinas 100.0
3bf5_A306 Ribokinase related protein; 10640157, putative rib 100.0
1vk4_A298 PFKB carbohydrate kinase TM0415; structural genomi 100.0
2yxt_A312 Pyridoxal kinase; beta sheet with alpha helix, met 99.89
2ddm_A283 Pyridoxine kinase; pyridoxal kinase, ribokinase, p 99.87
1jxh_A288 Phosphomethylpyrimidine kinase; THID, ribokinase f 99.85
1ub0_A258 THID, phosphomethylpyrimidine kinase; thiamin bios 99.84
2i5b_A271 Phosphomethylpyrimidine kinase; ADP complex, PDXK, 99.81
3pzs_A289 PM kinase, pyridoxamine kinase; structural genomic 99.73
3h74_A282 Pyridoxal kinase; PSI-II, structural genomics, pro 99.67
3zs7_A300 Pyridoxal kinase; transferase, sleeping sickness; 99.66
3mbh_A291 Putative phosphomethylpyrimidine kinase; structura 99.65
1ekq_A272 Hydroxyethylthiazole kinase; alpha-beta, transfera 99.47
3rm5_A 550 Hydroxymethylpyrimidine/phosphomethylpyrimidine K 99.38
1v8a_A265 Hydroxyethylthiazole kinase; alpha-beta, ATP bindi 99.02
2r3b_A310 YJEF-related protein; putative kinase in the ribok 98.74
3drw_A474 ADP-specific phosphofructokinase; AMP, GLYC kinase 98.73
3rss_A502 Putative uncharacterized protein; unknown function 98.67
1ua4_A455 Glucokinase, ADP-dependent glucokinase; transferas 98.65
3bgk_A311 SMU.573, putative uncharacterized protein; alpha/b 98.65
1l2l_A457 ADP-dependent glucokinase; ADP glucokinase APO, tr 98.65
3rpz_A279 ADP/ATP-dependent NAD(P)H-hydrate dehydratase; str 98.58
1gc5_A467 ADP-dependent glucokinase; ALFA/beta sandwichs, in 98.57
3dzv_A273 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_ 98.46
3hpd_A265 Hydroxyethylthiazole kinase; alpha-beta, ATP bindi 97.77
3nl6_A540 Thiamine biosynthetic bifunctional enzyme; thiamin 97.64
3k5w_A475 Carbohydrate kinase; 11206B,helicobacter pylori,PS 96.99
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Back     alignment and structure
Probab=100.00  E-value=3.3e-40  Score=309.56  Aligned_cols=253  Identities=24%  Similarity=0.313  Sum_probs=220.6

Q ss_pred             ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840            2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE   81 (327)
Q Consensus         2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~   81 (327)
                      ...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.++++++++|++.+.+..+ 
T Consensus        38 ~~~~GG~~~NvA~~la~LG~~v~~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~-  116 (328)
T 3kzh_A           38 KISFGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADM-  116 (328)
T ss_dssp             EEEEECHHHHHHHHHHHTTCCEEEECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEEC-
T ss_pred             EEccCcHHHHHHHHHHHcCCCcEEEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEch-
Confidence            4679999999999999999999999999999999999999999999999888878888999999999999998766543 


Q ss_pred             hhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHHHH
Q 036840           82 SIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELV  161 (327)
Q Consensus        82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~  161 (327)
                      .+...+++++++...+.++.++++++++.++ +.+..+++ +++.++++++|+++....+.+.++++++|++++|++|+.
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~-a~~~~~~v~~D~~~~~~~~~~~~~l~~~dil~~N~~E~~  194 (328)
T 3kzh_A          117 KSIGAMNTDFIDSKREIFENAEYTVLDSDNP-EIMEYLLK-NFKDKTNFILDPVSAEKASWVKHLIKDFHTIKPNRHEAE  194 (328)
T ss_dssp             GGGGGCCHHHHHHTHHHHHTCSEEEEESSCH-HHHHHHHH-HHTTTSEEEEECCSHHHHHTSTTTGGGCSEECCBHHHHH
T ss_pred             hhhhhCCHHHHHHHHHhhccCCEEEEeCCcH-HHHHHHHH-HhhcCCcEEEEeCCHHHHHHHHHHhcCCcEEeCCHHHHH
Confidence            3445688888887677889999999999876 77777777 888999999999886655677889999999999999999


Q ss_pred             HHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCcccc
Q 036840          162 AMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL  241 (327)
Q Consensus       162 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (327)
                      .+++...            .+.++    ++++++.|.+.|++.||||+|++|++++.+++                    
T Consensus       195 ~l~g~~~------------~~~~~----~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~--------------------  238 (328)
T 3kzh_A          195 ILAGFPI------------TDTDD----LIKASNYFLGLGIKKVFISLDADGIFYNDGVS--------------------  238 (328)
T ss_dssp             HHHTSCC------------CSHHH----HHHHHHHHHHHTCCEEEEECGGGCEEEECSSC--------------------
T ss_pred             HHHCCCC------------CCHHH----HHHHHHHHHHhCCCEEEEEeCCCCEEEEeCCc--------------------
Confidence            9987421            11222    35667888888999999999999999987654                    


Q ss_pred             cccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHHHHHH
Q 036840          242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAAN  319 (327)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~~~~~  319 (327)
                                                .+++|+++++++|||||||+|+|||+++|++|+++++|+++|++++++.++.
T Consensus       239 --------------------------~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~  290 (328)
T 3kzh_A          239 --------------------------CGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKMPIEDIVKFAMTMSNITISH  290 (328)
T ss_dssp             --------------------------EEEEEESSCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTS
T ss_pred             --------------------------eEEecCCCcccCCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC
Confidence                                      7888999999999999999999999999999999999999999999998864
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Back     alignment and structure
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Back     alignment and structure
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Back     alignment and structure
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A Back     alignment and structure
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Back     alignment and structure
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A* Back     alignment and structure
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Back     alignment and structure
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A* Back     alignment and structure
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Back     alignment and structure
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Back     alignment and structure
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0 Back     alignment and structure
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Back     alignment and structure
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Back     alignment and structure
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Back     alignment and structure
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Back     alignment and structure
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Back     alignment and structure
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Back     alignment and structure
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Back     alignment and structure
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Back     alignment and structure
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Back     alignment and structure
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Back     alignment and structure
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A* Back     alignment and structure
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Back     alignment and structure
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Back     alignment and structure
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A* Back     alignment and structure
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Back     alignment and structure
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Back     alignment and structure
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Back     alignment and structure
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A* Back     alignment and structure
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Back     alignment and structure
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Back     alignment and structure
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Back     alignment and structure
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Back     alignment and structure
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Back     alignment and structure
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Back     alignment and structure
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Back     alignment and structure
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Back     alignment and structure
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Back     alignment and structure
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Back     alignment and structure
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Back     alignment and structure
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Back     alignment and structure
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601} Back     alignment and structure
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Back     alignment and structure
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Back     alignment and structure
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* Back     alignment and structure
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* Back     alignment and structure
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A* Back     alignment and structure
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2 Back     alignment and structure
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis} Back     alignment and structure
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A* Back     alignment and structure
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A* Back     alignment and structure
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} Back     alignment and structure
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* Back     alignment and structure
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A* Back     alignment and structure
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} Back     alignment and structure
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A Back     alignment and structure
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A Back     alignment and structure
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A Back     alignment and structure
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A* Back     alignment and structure
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3 Back     alignment and structure
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans} Back     alignment and structure
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3 Back     alignment and structure
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A Back     alignment and structure
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3 Back     alignment and structure
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis} Back     alignment and structure
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii} Back     alignment and structure
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* Back     alignment and structure
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 327
d2afba1333 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase 2e-14
d2absa1350 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma g 4e-09
d1vk4a_288 c.72.1.1 (A:) Hypothetical protein TM0415 {Thermot 1e-07
d1rkda_306 c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 3e-07
d2abqa1306 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase Fru 8e-07
d1tyya_304 c.72.1.1 (A:) Aminoimidazole riboside kinase {Salm 4e-06
d2f02a1313 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase Lac 2e-05
d2ajra1319 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {T 3e-05
d1bx4a_342 c.72.1.1 (A:) Adenosine kinase {Human (Homo sapien 6e-04
d2dcna1308 c.72.1.1 (A:2-309) Hypothetical fructokinase ST247 7e-04
d1v19a_302 c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther 9e-04
d1v19a_302 c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther 0.002
>d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: 2-keto-3-deoxygluconate kinase
species: Thermotoga maritima, TM0067 [TaxId: 2336]

 Score = 70.5 bits (171), Expect = 2e-14
 Identities = 38/320 (11%), Positives = 80/320 (25%), Gaps = 60/320 (18%)

Query: 1   VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
            +   GG   NVA  ++++G   Y ++ L  +  G+    H +  G+ T+ I R  +   
Sbjct: 30  FDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIG 89

Query: 61  AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
                I               S       +        I   +     + ++PP      
Sbjct: 90  IYFLEIGASQRPSKVVYDRAHSAISEAKREDF--DWEKILDGARWFHFSGITPPLGKELP 147

Query: 121 KIAAE--------------CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANA 166
            I  +                             + +   ++Y+ V+  NE+++  +   
Sbjct: 148 LILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGI 207

Query: 167 LSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMR 226
                  +    N+ +   + + +        +   + V +TL        +        
Sbjct: 208 SVEGLDLKTGKLNREAYAKIAEEV------TRKYNFKTVGITLRESISATVNYW------ 255

Query: 227 IGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGD 286
                                          M    G              +V   GAGD
Sbjct: 256 -----------------------------SVMVFENGQPH---FSNRYEIHIVDRVGAGD 283

Query: 287 CLVGGTLASISSGLDVMQSV 306
              G  +     G D  +  
Sbjct: 284 SFAGALIYGSLMGFDSQKKA 303
>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Length = 350 Back     information, alignment and structure
>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Length = 288 Back     information, alignment and structure
>d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Length = 306 Back     information, alignment and structure
>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Length = 306 Back     information, alignment and structure
>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Length = 304 Back     information, alignment and structure
>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Length = 313 Back     information, alignment and structure
>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Length = 319 Back     information, alignment and structure
>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 342 Back     information, alignment and structure
>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308 Back     information, alignment and structure
>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302 Back     information, alignment and structure
>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query327
d2f02a1313 Tagatose-6-phosphate kinase LacC {Enterococcus fae 100.0
d1v19a_302 2-keto-3-deoxygluconate kinase {Thermus thermophil 100.0
d2abqa1306 Fructose 1-phosphate kinase FruB {Bacillus halodur 100.0
d2ajra1319 Putative sugar kinase TM0828 {Thermotoga maritima 100.0
d2afba1333 2-keto-3-deoxygluconate kinase {Thermotoga maritim 100.0
d1rkda_306 Ribokinase {Escherichia coli [TaxId: 562]} 100.0
d1bx4a_342 Adenosine kinase {Human (Homo sapiens) [TaxId: 960 100.0
d2fv7a1308 Ribokinase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1vm7a_299 Ribokinase {Thermotoga maritima [TaxId: 2336]} 99.98
d2absa1350 Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} 99.98
d1tyya_304 Aminoimidazole riboside kinase {Salmonella typhimu 99.97
d2dcna1308 Hypothetical fructokinase ST2478 {Sulfolobus tokod 99.97
d1vk4a_288 Hypothetical protein TM0415 {Thermotoga maritima [ 99.95
d1vi9a_288 Pyridoxamine kinase {Escherichia coli [TaxId: 562] 99.58
d1ub0a_258 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha 99.29
d1lhpa_309 Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940] 99.23
d1jxha_266 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha 99.18
d1gc5a_467 ADP-dependent glucokinase {Archaeon Thermococcus l 98.39
d1u2xa_450 ADP-specific phosphofructokinase {Pyrococcus horik 98.35
d1ua4a_454 ADP-dependent glucokinase {Archaeon Pyrococcus fur 98.19
d1ekqa_269 Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ba 98.18
d1l2la_451 ADP-dependent glucokinase {Archaeon Thermococcus l 98.18
d1v8aa_264 Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ar 98.08
d1kyha_275 Hypothetical protein YxkO {Bacillus subtilis [TaxI 98.07
d2ax3a1278 Hypothetical protein TM0922, C-terminal domain {Th 97.41
>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Tagatose-6-phosphate kinase LacC
species: Enterococcus faecalis [TaxId: 1351]

Probab=100.00  E-value=5.3e-35  Score=269.48  Aligned_cols=250  Identities=17%  Similarity=0.196  Sum_probs=200.0

Q ss_pred             ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840            2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE   81 (327)
Q Consensus         2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~   81 (327)
                      +.++||++.|+|.+|++||.++.++|.+|+| .|+.+.+.|++.||++.++...+  .|+.++.+++.++++.+...   
T Consensus        32 ~~~~GG~~~NvA~~l~~lG~~~~~~~~vGdd-~~~~i~~~l~~~gi~~~~i~~~~--~t~~~~~~~~~~~~~~~~~~---  105 (313)
T d2f02a1          32 TKTPGGKGLNVTRVIHDLGGDVIATGVLGGF-HGAFIANELKKANIPQAFTSIKE--ETRDSIAILHEGNQTEILEA---  105 (313)
T ss_dssp             EEEEESHHHHHHHHHHHHTCCEEEEEEEEHH-HHHHHHHHHHHTTCCBCCEEESS--CCEEEEEEEETTEEEEEEEC---
T ss_pred             eecCCCHHHHHHHHHHHCCCCEEEEEEecCc-cHHHHHHHHHhhccCceEEEeec--CCceEEEEEeCCCceEEeec---
Confidence            4678999999999999999999999999977 78999999999999999887654  57777777776554443321   


Q ss_pred             hhcccCCHHHHHH----HHhhhcCCcEEEEecCC----CHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEE
Q 036840           82 SIEKFLTPDWIRQ----FIHHISSASVLMVDANL----SPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVV  153 (327)
Q Consensus        82 ~~~~~l~~~~i~~----~~~~l~~~~~v~~~g~~----~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv  153 (327)
                        ...+++++++.    +.+.+..++++++++..    ..+.+..+++.+++.++++++|++..... .....+...|++
T Consensus       106 --~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l  182 (313)
T d2f02a1         106 --GPTVSPEEISNFLENFDQLIKQAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDSLR-QVLQGPWKPYLI  182 (313)
T ss_dssp             --CCBCCHHHHHHHHHHHHHHHTTCSEEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCTHHHH-HHHHSSCCCSEE
T ss_pred             --cccCCHHHHHHHHHHhhhhhcccceEEEecccccccCHHHHHHHHHHHHhcCCceeecchHHHHH-HHhhhcccceEE
Confidence              23466666554    35678999999998754    34778889999999999999998763322 223345679999


Q ss_pred             eCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCC
Q 036840          154 SPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK  233 (327)
Q Consensus       154 ~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~  233 (327)
                      ++|++|+..+++....+          .+.    +.+.++++.+...|++.++||+|++|++++.+++            
T Consensus       183 ~~n~~E~~~l~g~~~~~----------~~~----~~~~~~~~~~~~~g~~~vivT~G~~Ga~~~~~~~------------  236 (313)
T d2f02a1         183 KPNLEELEGLLGQDFSE----------NPL----AAVQTALTKPMFAGIEWIVISLGKDGAIAKHHDQ------------  236 (313)
T ss_dssp             CCBHHHHHHHHTCCCCS----------SCH----HHHHHHHTSGGGTTCSEEEEECGGGCEEEEETTE------------
T ss_pred             EehhhhHHHhhcccccc----------chh----hHHHHHHHHHHhcCCceeEEecccceEEEEeCCc------------
Confidence            99999999988752211          111    1235556666778999999999999999988765            


Q ss_pred             CCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHH
Q 036840          234 PYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKT  313 (327)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~  313 (327)
                                                        .+++|+++++++|||||||+|+|||+++|++|+++++|+++|++++
T Consensus       237 ----------------------------------~~~~~~~~v~vvDttGAGD~f~ag~i~~l~~g~~~~~al~~A~a~a  282 (313)
T d2f02a1         237 ----------------------------------FYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAPAAELLKWGMAAG  282 (313)
T ss_dssp             ----------------------------------EEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred             ----------------------------------eEecccccCCCCCCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence                                              7888999999999999999999999999999999999999999999


Q ss_pred             HHHHHHH
Q 036840          314 VYAAANV  320 (327)
Q Consensus       314 ~~~~~~~  320 (327)
                      ++.+...
T Consensus       283 a~~~~~~  289 (313)
T d2f02a1         283 MANAQER  289 (313)
T ss_dssp             HHHHHSS
T ss_pred             HHHhCCC
Confidence            9887654
>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d1u2xa_ c.72.1.3 (A:) ADP-specific phosphofructokinase {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1l2la_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure