Citrus Sinensis ID: 037166

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
MEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLPDDASLVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKLFGDCRECDSWRLCEGQSS
ccccccccccccccccccccEEEEEEcccccccccccccHHHHcccccccccHHHHHHHHHcccEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccccccccc
cHHHHHHHHcccccccccccEEEEEcccccccccccHHHHHHHcccccccccHHHHHHHHHcccEEEEcccccHHccccccEEcccEEccccccccEccccccHHHHHHHHcccccEEEEEEcccccHHHHHHHccEEEEccccccccccEccccccccEEEEEcccHHHHHHHHHHHHccccccccccccccccHHHHHHcccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHccc
mekfvlqpsssahqlplsgltFAIKDifdvdghvtgfgnpdwarthsaatsTAPAVLAVLSGGATSIGKTIMDEMAYSIngenkhygtptnpwapdrvpggsssgsaVAVGAKLVdfslgtdtggsvrvpasycgifgfrpshgavstagvipmaqsfdtvgwfawdpkilNRVGRVLlqlpddaslvrpsqvifaedclqlssipsdritQGLVKSVEKLfgdcrecdswrlcegqss
mekfvlqpsssahqlpLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLPDDASLVRPSQVIFAEDCLqlssipsdritqGLVKSVEKLfgdcrecdswrlcegqss
MEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPggsssgsavavgaKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLPDDASLVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKLFGDCRECDSWRLCEGQSS
***************PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSING**************************VAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLPDDASLVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKLFGDCRECDSWRLC*****
****************LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLPDDASLVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKLFGDCRECDSWRLCEGQ**
************HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDR*********AVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLPDDASLVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKLFGDCRECDSWRLCEGQSS
****VLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPGGSS********AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLPDDASLVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKLFGDCRECDSWRLCEGQS*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLPDDASLVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKLFGDCRECDSWRLCEGQSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query239 2.2.26 [Sep-21-2011]
Q9FR37 425 Amidase 1 OS=Arabidopsis yes no 0.861 0.484 0.748 6e-84
Q9LVH5 589 Outer envelope protein 64 no no 0.857 0.348 0.616 2e-70
F4KCL7 603 Outer envelope protein 64 no no 0.882 0.349 0.575 1e-65
Q9MUK5 593 Translocon at the outer m N/A no 0.857 0.345 0.626 5e-63
Q9RTA9 482 Glutamyl-tRNA(Gln) amidot no no 0.648 0.321 0.452 4e-27
Q8PXJ1 476 Glutamyl-tRNA(Gln) amidot yes no 0.631 0.317 0.450 7e-27
Q1J0C2 483 Glutamyl-tRNA(Gln) amidot yes no 0.631 0.312 0.450 2e-26
A9M003 481 Glutamyl-tRNA(Gln) amidot yes no 0.615 0.305 0.442 5e-26
Q9JTZ5 481 Glutamyl-tRNA(Gln) amidot yes no 0.615 0.305 0.442 6e-26
C4YRY0 450 Glutamyl-tRNA(Gln) amidot N/A no 0.790 0.42 0.393 6e-26
>sp|Q9FR37|AMI1_ARATH Amidase 1 OS=Arabidopsis thaliana GN=AMI1 PE=1 SV=1 Back     alignment and function desciption
 Score =  310 bits (794), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 155/207 (74%), Positives = 170/207 (82%), Gaps = 1/207 (0%)

Query: 17  LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 76
           L GLTFAIKDIFDV+G VTGFGNPDW RTHSAATSTAP V ++L  GAT++G TIMDEMA
Sbjct: 28  LQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAATSTAPVVSSLLEAGATALGITIMDEMA 87

Query: 77  YSINGENKHYGTPTNPWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 136
           YSINGEN HYGTP NP A DRVPGGSSSGSAVAV A+LVDFS+GTDTGGSVRVPASYCGI
Sbjct: 88  YSINGENAHYGTPRNPIAFDRVPGGSSSGSAVAVAARLVDFSIGTDTGGSVRVPASYCGI 147

Query: 137 FGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLPDDASLVRPSQVIFA 196
           FGFRPSHGAVST G+ PMAQSFDTVGWFA D   L RVG VLLQ     + + PSQ+I A
Sbjct: 148 FGFRPSHGAVSTVGLTPMAQSFDTVGWFARDTATLKRVGCVLLQ-QHHLNPIEPSQLIIA 206

Query: 197 EDCLQLSSIPSDRITQGLVKSVEKLFG 223
           +DC +L S+P D + Q LV SVEK FG
Sbjct: 207 DDCFKLCSVPHDLLVQPLVGSVEKSFG 233
Amidase involved in auxin biosynthesis. Converts indole-3-acetamide into indole-3-acetic acid. Can also use L-asparagine, oleamide and 1-naphtalene-acetamide as substrates, but not indole-3-acetonitrile or indole-3-acetyl-L-aspartic acid.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 4
>sp|Q9LVH5|OE64C_ARATH Outer envelope protein 64, chloroplastic OS=Arabidopsis thaliana GN=OEP64 PE=1 SV=1 Back     alignment and function description
>sp|F4KCL7|OE64M_ARATH Outer envelope protein 64, mitochondrial OS=Arabidopsis thaliana GN=OM64 PE=1 SV=1 Back     alignment and function description
>sp|Q9MUK5|TOC64_PEA Translocon at the outer membrane of chloroplasts 64 OS=Pisum sativum GN=TOC64 PE=1 SV=1 Back     alignment and function description
>sp|Q9RTA9|GATA_DEIRA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|Q8PXJ1|GATA_METMA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|Q1J0C2|GATA_DEIGD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus geothermalis (strain DSM 11300) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|A9M003|GATA_NEIM0 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria meningitidis serogroup C (strain 053442) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|Q9JTZ5|GATA_NEIMA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|C4YRY0|GATA_CANAW Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial OS=Candida albicans (strain WO-1) GN=HER2 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query239
359487733 433 PREDICTED: amidase 1-like [Vitis vinifer 0.928 0.512 0.820 1e-103
147801313 433 hypothetical protein VITISV_015334 [Viti 0.928 0.512 0.820 1e-103
255542602 500 amidase, putative [Ricinus communis] gi| 0.928 0.444 0.811 1e-100
224125294 427 amidase family protein [Populus trichoca 0.916 0.512 0.789 2e-95
357441631 423 Glutamyl-tRNA(Gln) amidotransferase subu 0.933 0.527 0.745 2e-94
356576771 433 PREDICTED: glutamyl-tRNA(Gln) amidotrans 0.928 0.512 0.757 8e-94
449518011 428 PREDICTED: amidase 1-like [Cucumis sativ 0.928 0.518 0.753 3e-93
449435683 428 PREDICTED: amidase 1-like [Cucumis sativ 0.928 0.518 0.753 3e-93
356535097 433 PREDICTED: glutamyl-tRNA(Gln) amidotrans 0.924 0.510 0.761 6e-93
215272285 425 indole-3-acetamide hydrolase [Nicotiana 0.928 0.522 0.745 8e-91
>gi|359487733|ref|XP_002284823.2| PREDICTED: amidase 1-like [Vitis vinifera] gi|296088312|emb|CBI36757.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 183/223 (82%), Positives = 200/223 (89%), Gaps = 1/223 (0%)

Query: 1   MEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL 60
           ME+F+LQPSSS+H+LPL+GLTFA+KDIFDVDG+VTGFGNPDWARTH AA  TAP+VLAVL
Sbjct: 11  MERFILQPSSSSHELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHQAAMLTAPSVLAVL 70

Query: 61  SGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPGGSSSGSAVAVGAKLVDFSLG 120
            GGAT +GKT+MDEMAYSINGENKHYGTPTNP APDRVPGGSSSGSAVAVGA LVDFSLG
Sbjct: 71  KGGATCVGKTVMDEMAYSINGENKHYGTPTNPQAPDRVPGGSSSGSAVAVGAMLVDFSLG 130

Query: 121 TDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ 180
           TDTGGSVRVPASYCGIFG RPSHG VST GVIPMAQSFDTVGWFA DP+ILNRVG VLL 
Sbjct: 131 TDTGGSVRVPASYCGIFGIRPSHGVVSTTGVIPMAQSFDTVGWFARDPEILNRVGHVLLP 190

Query: 181 LPDDASLVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKLFG 223
            P D + V+PSQ+I  EDC +L SIP DR+TQ L+KSVEKLFG
Sbjct: 191 FP-DVNPVKPSQIIIPEDCFRLLSIPIDRVTQVLIKSVEKLFG 232

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147801313|emb|CAN77023.1| hypothetical protein VITISV_015334 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255542602|ref|XP_002512364.1| amidase, putative [Ricinus communis] gi|223548325|gb|EEF49816.1| amidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224125294|ref|XP_002319550.1| amidase family protein [Populus trichocarpa] gi|222857926|gb|EEE95473.1| amidase family protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357441631|ref|XP_003591093.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula] gi|355480141|gb|AES61344.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula] gi|388518579|gb|AFK47351.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356576771|ref|XP_003556503.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] Back     alignment and taxonomy information
>gi|449518011|ref|XP_004166037.1| PREDICTED: amidase 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449435683|ref|XP_004135624.1| PREDICTED: amidase 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356535097|ref|XP_003536085.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] Back     alignment and taxonomy information
>gi|215272285|dbj|BAG84637.1| indole-3-acetamide hydrolase [Nicotiana tabacum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query239
TAIR|locus:2036029 425 AMI1 "AT1G08980" [Arabidopsis 0.928 0.522 0.660 3.1e-74
TAIR|locus:2088600 589 TOC64-III "translocon at the o 0.903 0.366 0.566 1.5e-65
UNIPROTKB|Q9MUK5 593 TOC64 "Translocon at the outer 0.891 0.359 0.564 4.7e-64
TAIR|locus:2184757 603 TOC64-V "AT5G09420" [Arabidops 0.895 0.354 0.523 4.8e-55
UNIPROTKB|Q60AB7 341 MCA0950 "Amidase family protei 0.535 0.375 0.534 1.8e-30
CGD|CAL0003013 450 orf19.3956 [Candida albicans ( 0.899 0.477 0.330 1.4e-25
UNIPROTKB|Q936X3 457 atzE "Biuret hydrolase" [Pseud 0.610 0.319 0.380 2.3e-22
UNIPROTKB|G4N3U3 631 MGG_05017 "Uncharacterized pro 0.719 0.272 0.365 7.7e-21
TIGR_CMR|CBU_1474 483 CBU_1474 "glutamyl-tRNA(Gln) a 0.602 0.298 0.390 3.6e-20
UNIPROTKB|Q97SE6 488 gatA "Glutamyl-tRNA(Gln) amido 0.615 0.301 0.369 1.7e-19
TAIR|locus:2036029 AMI1 "AT1G08980" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
 Identities = 148/224 (66%), Positives = 168/224 (75%)

Query:     1 MEKFVLQPSSSAHQLP-LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAV 59
             +EK  + P+S++   P L GLTFAIKDIFDV+G VTGFGNPDW RTHSAATSTAP V ++
Sbjct:    11 IEKVTISPTSTSSSPPSLQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAATSTAPVVSSL 70

Query:    60 LSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVDFSL 119
             L  GAT++G TIMDEMAYSINGEN HYGTP NP A DRVP             +LVDFS+
Sbjct:    71 LEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAVAVAARLVDFSI 130

Query:   120 GTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL 179
             GTDTGGSVRVPASYCGIFGFRPSHGAVST G+ PMAQSFDTVGWFA D   L RVG VLL
Sbjct:   131 GTDTGGSVRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTVGWFARDTATLKRVGCVLL 190

Query:   180 QLPDDASLVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKLFG 223
             Q     + + PSQ+I A+DC +L S+P D + Q LV SVEK FG
Sbjct:   191 Q-QHHLNPIEPSQLIIADDCFKLCSVPHDLLVQPLVGSVEKSFG 233
GO:0004040 "amidase activity" evidence=ISS;IDA
GO:0016884 "carbon-nitrogen ligase activity, with glutamine as amido-N-donor" evidence=IEA
GO:0009684 "indoleacetic acid biosynthetic process" evidence=IDA
GO:0016810 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds" evidence=IDA
GO:0043864 "indoleacetamide hydrolase activity" evidence=IDA
GO:0005737 "cytoplasm" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0009965 "leaf morphogenesis" evidence=RCA
GO:0019761 "glucosinolate biosynthetic process" evidence=RCA
GO:0030154 "cell differentiation" evidence=RCA
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA
TAIR|locus:2088600 TOC64-III "translocon at the outer membrane of chloroplasts 64-III" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9MUK5 TOC64 "Translocon at the outer membrane of chloroplasts 64" [Pisum sativum (taxid:3888)] Back     alignment and assigned GO terms
TAIR|locus:2184757 TOC64-V "AT5G09420" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q60AB7 MCA0950 "Amidase family protein" [Methylococcus capsulatus str. Bath (taxid:243233)] Back     alignment and assigned GO terms
CGD|CAL0003013 orf19.3956 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q936X3 atzE "Biuret hydrolase" [Pseudomonas sp. ADP (taxid:47660)] Back     alignment and assigned GO terms
UNIPROTKB|G4N3U3 MGG_05017 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_1474 CBU_1474 "glutamyl-tRNA(Gln) amidotransferase, A subunit" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|Q97SE6 gatA "Glutamyl-tRNA(Gln) amidotransferase subunit A" [Streptococcus pneumoniae TIGR4 (taxid:170187)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FR37AMI1_ARATH3, ., 5, ., 1, ., 40.74870.86190.4847yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00022849001
SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (433 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00020369001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (555 aa)
• • • • 0.682

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query239
PLN02722 422 PLN02722, PLN02722, indole-3-acetamide amidohydrol 1e-148
PRK08310 395 PRK08310, PRK08310, amidase; Provisional 1e-97
COG0154 475 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransf 3e-66
pfam01425 431 pfam01425, Amidase, Amidase 3e-55
PRK09201 465 PRK09201, PRK09201, amidase; Provisional 5e-48
PRK00012 459 PRK00012, gatA, aspartyl/glutamyl-tRNA amidotransf 2e-47
PRK07488 472 PRK07488, PRK07488, indole acetimide hydrolase; Va 7e-45
TIGR00132 460 TIGR00132, gatA, aspartyl/glutamyl-tRNA(Asn/Gln) a 1e-44
PRK08186 600 PRK08186, PRK08186, allophanate hydrolase; Provisi 4e-44
PRK07056 454 PRK07056, PRK07056, amidase; Provisional 8e-44
TIGR02713 561 TIGR02713, allophanate_hyd, allophanate hydrolase 1e-43
PRK06102 452 PRK06102, PRK06102, hypothetical protein; Provisio 3e-43
TIGR02715 452 TIGR02715, amido_AtzE, amidohydrolase, AtzE family 5e-43
PRK05962 424 PRK05962, PRK05962, amidase; Validated 4e-36
PRK07139 439 PRK07139, PRK07139, amidase; Provisional 8e-31
PRK06170 490 PRK06170, PRK06170, amidase; Provisional 9e-31
PRK12470 462 PRK12470, PRK12470, amidase; Provisional 1e-29
PRK06169 466 PRK06169, PRK06169, putative amidase; Provisional 5e-27
PRK07235 502 PRK07235, PRK07235, amidase; Provisional 3e-26
PRK06061 483 PRK06061, PRK06061, amidase; Provisional 2e-24
PRK08137 497 PRK08137, PRK08137, amidase; Provisional 5e-23
PRK06707 536 PRK06707, PRK06707, amidase; Provisional 2e-22
PRK07486 484 PRK07486, PRK07486, amidase; Provisional 4e-22
PRK07869 468 PRK07869, PRK07869, amidase; Provisional 4e-22
PRK07042 464 PRK07042, PRK07042, amidase; Provisional 7e-22
PRK07487 469 PRK07487, PRK07487, amidase; Provisional 8e-20
PRK11910 615 PRK11910, PRK11910, amidase; Provisional 6e-19
PRK06828 491 PRK06828, PRK06828, amidase; Provisional 4e-18
PRK06565 566 PRK06565, PRK06565, amidase; Validated 3e-12
PRK06529 482 PRK06529, PRK06529, amidase; Provisional 8e-11
>gnl|CDD|166363 PLN02722, PLN02722, indole-3-acetamide amidohydrolase Back     alignment and domain information 
 Score =  420 bits (1081), Expect = e-148
 Identities = 191/223 (85%), Positives = 202/223 (90%), Gaps = 1/223 (0%)

Query: 1   MEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL 60
           MEKFVL P+SS+H LPL GLTFA+KDIFDV+G+VTGFGNPDWARTHSAATSTAPAVLAVL
Sbjct: 11  MEKFVLSPTSSSHDLPLHGLTFAVKDIFDVEGYVTGFGNPDWARTHSAATSTAPAVLAVL 70

Query: 61  SGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPGGSSSGSAVAVGAKLVDFSLG 120
            GGAT +GKTIMDEMAYSINGEN HYGTPTNP APDRVPGGSSSGSAVAVGAKLVDFSLG
Sbjct: 71  RGGATCVGKTIMDEMAYSINGENAHYGTPTNPIAPDRVPGGSSSGSAVAVGAKLVDFSLG 130

Query: 121 TDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ 180
           TDTGGSVRVPASYCGIFGFRPSHGAVST GVIPMAQSFDTVGWFA DP IL RVG VLLQ
Sbjct: 131 TDTGGSVRVPASYCGIFGFRPSHGAVSTVGVIPMAQSFDTVGWFARDPVILKRVGHVLLQ 190

Query: 181 LPDDASLVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKLFG 223
            P D + ++PSQ+I AEDC QLSSIP DR+ Q LVKSVEKLFG
Sbjct: 191 QP-DVNPIKPSQIIIAEDCFQLSSIPHDRLVQVLVKSVEKLFG 232

Length = 422
>gnl|CDD|181375 PRK08310, PRK08310, amidase; Provisional Back     alignment and domain information
>gnl|CDD|223232 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|216494 pfam01425, Amidase, Amidase Back     alignment and domain information
>gnl|CDD|236409 PRK09201, PRK09201, amidase; Provisional Back     alignment and domain information
>gnl|CDD|234572 PRK00012, gatA, aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed Back     alignment and domain information
>gnl|CDD|236030 PRK07488, PRK07488, indole acetimide hydrolase; Validated Back     alignment and domain information
>gnl|CDD|232842 TIGR00132, gatA, aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit Back     alignment and domain information
>gnl|CDD|236177 PRK08186, PRK08186, allophanate hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|235921 PRK07056, PRK07056, amidase; Provisional Back     alignment and domain information
>gnl|CDD|233981 TIGR02713, allophanate_hyd, allophanate hydrolase Back     alignment and domain information
>gnl|CDD|235698 PRK06102, PRK06102, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|233982 TIGR02715, amido_AtzE, amidohydrolase, AtzE family Back     alignment and domain information
>gnl|CDD|168315 PRK05962, PRK05962, amidase; Validated Back     alignment and domain information
>gnl|CDD|235945 PRK07139, PRK07139, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235723 PRK06170, PRK06170, amidase; Provisional Back     alignment and domain information
>gnl|CDD|171524 PRK12470, PRK12470, amidase; Provisional Back     alignment and domain information
>gnl|CDD|180437 PRK06169, PRK06169, putative amidase; Provisional Back     alignment and domain information
>gnl|CDD|235979 PRK07235, PRK07235, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235686 PRK06061, PRK06061, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236161 PRK08137, PRK08137, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235855 PRK06707, PRK06707, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236028 PRK07486, PRK07486, amidase; Provisional Back     alignment and domain information
>gnl|CDD|181154 PRK07869, PRK07869, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235915 PRK07042, PRK07042, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236029 PRK07487, PRK07487, amidase; Provisional Back     alignment and domain information
>gnl|CDD|183377 PRK11910, PRK11910, amidase; Provisional Back     alignment and domain information
>gnl|CDD|180715 PRK06828, PRK06828, amidase; Provisional Back     alignment and domain information
>gnl|CDD|180626 PRK06565, PRK06565, amidase; Validated Back     alignment and domain information
>gnl|CDD|180608 PRK06529, PRK06529, amidase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 239
COG0154 475 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su 100.0
PRK08310 395 amidase; Provisional 100.0
PLN02722 422 indole-3-acetamide amidohydrolase 100.0
PF01425 441 Amidase: Amidase; InterPro: IPR000120 Amidase sign 100.0
PRK05962 424 amidase; Validated 100.0
PRK00012 459 gatA aspartyl/glutamyl-tRNA amidotransferase subun 100.0
PRK07235 502 amidase; Provisional 100.0
TIGR00132 460 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) 100.0
TIGR02715 452 amido_AtzE amidohydrolase, AtzE family. Members of 100.0
PRK06102 452 hypothetical protein; Provisional 100.0
PRK07056 454 amidase; Provisional 100.0
PRK07486 484 amidase; Provisional 100.0
PRK09201 465 amidase; Provisional 100.0
PRK07488 472 indole acetimide hydrolase; Validated 100.0
PRK07487 469 amidase; Provisional 100.0
PRK07869 468 amidase; Provisional 100.0
PRK06169 466 putative amidase; Provisional 100.0
PRK08137 497 amidase; Provisional 100.0
PRK06170 490 amidase; Provisional 100.0
PRK07139 439 amidase; Provisional 100.0
PRK12470 462 amidase; Provisional 100.0
PRK07042 464 amidase; Provisional 100.0
PRK08186 600 allophanate hydrolase; Provisional 100.0
TIGR02713 561 allophanate_hyd allophanate hydrolase. Allophanate 100.0
PRK06529 482 amidase; Provisional 100.0
PRK06061 483 amidase; Provisional 100.0
PRK06828 491 amidase; Provisional 100.0
PRK11910 615 amidase; Provisional 100.0
PRK06565 566 amidase; Validated 100.0
PRK06707 536 amidase; Provisional 100.0
KOG1211 506 consensus Amidases [Translation, ribosomal structu 100.0
KOG1212 560 consensus Amidases [Translation, ribosomal structu 100.0
>COG0154 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=9.1e-62  Score=462.49  Aligned_cols=210  Identities=34%  Similarity=0.507  Sum_probs=189.2

Q ss_pred             CCCCCCccccEEEeecCCCCCCccCCCCcHhhhhcCCCCCCcHHHHHHHHhCCCEEEeccChhhccccCCCCCCCCCCCC
Q 037166           11 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPT   90 (239)
Q Consensus        11 ~~~~gpL~Gvpi~vKD~i~v~G~~tt~Gs~~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~~~~~G~~~   90 (239)
                      +...|||+||||+|||||+++|++||+||..++++  ++.+|+++|+||+++|||++|||||+||+|+..++|+.||.|+
T Consensus        68 g~~~gpL~GvPiavKDn~~~~G~~Tt~gS~~l~~~--~p~~DA~vV~rL~~aGaviiGKTNm~Efa~g~~~~~s~~G~t~  145 (475)
T COG0154          68 GEPLGPLAGVPIAVKDNIDTAGLPTTAGSKALEDY--VPPYDATVVERLRAAGAVILGKTNMDEFAMGSSTENSAFGPTR  145 (475)
T ss_pred             CCCCCCcCCceEEEeeccccCCCccCccChhhccC--CCCcCcHHHHHHHHCCCEEEeecCCchhhcCCCCCCCCCCCCC
Confidence            46678999999999999999999999999999874  5699999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCchhhhhhhcCCCcccccccCCCCccccccccCccccccCCCcccCCCCCCCCCCCcccccccCCHHH
Q 037166           91 NPWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKI  170 (239)
Q Consensus        91 NP~~~~~~~GGSSgGsaaava~g~~~~alGtD~~GSiR~PA~~~Gv~glkPT~g~is~~G~~p~~~s~d~~G~~ar~~~~  170 (239)
                      ||||+.++||||||||||+||++++++++|||||||||+||+||||||||||+||||++|++|+++++|++|||+|+++|
T Consensus       146 NP~~~~~~pGGSSgGSAaAVAag~~~~alGSDtGGSIR~PAa~cGvvGlKPT~Grvsr~g~~~~a~sld~~GplartV~D  225 (475)
T COG0154         146 NPWNLERVPGGSSGGSAAAVAAGLVPLALGSDTGGSIRIPAAFCGLVGLKPTYGRVSRYGVVPLASSLDQIGPLARTVRD  225 (475)
T ss_pred             CCCCCCCCCCcCchHHHHHHHhCCcchhcccCCCCchhhhhhhhCceeeCCCCCccCCCCCccccCCcCccCcccCCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCC---------------CCCCcEEEEecCCccCCCCccHHHHHHHHHHHHHHhC
Q 037166          171 LNRVGRVLLQLPDDAS---------------LVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKLFG  223 (239)
Q Consensus       171 l~~~~~~~~~~~~~~~---------------~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~al~~~~~  223 (239)
                      +..+++++.+.+..++               ..+..||+++.++... .+...++.+++.+++++|..
T Consensus       226 ~a~l~~v~~g~D~~d~~~~~~~~~~~~~~~~~~~~lrigv~~~~~~~-~~~~~~v~~~~~~a~~~l~~  292 (475)
T COG0154         226 AALLLDVIAGPDPRDSPLPPPPPVPPALAGKDLKGLRIGVPKELGGG-GPLDPDVRAAFEAAVKALEA  292 (475)
T ss_pred             HHHHHHHHcCCCCcccccccccCccchhhccCCCCcEEEEECccccc-CCCcHHHHHHHHHHHHHHHH
Confidence            9999999998766541               1345689999887653 22345666667777766643

>PRK08310 amidase; Provisional Back     alignment and domain information
>PLN02722 indole-3-acetamide amidohydrolase Back     alignment and domain information
>PF01425 Amidase: Amidase; InterPro: IPR000120 Amidase signature (AS) enzymes are a large group of hydrolytic enzymes that contain a conserved stretch of approximately 130 amino acids known as the AS sequence Back     alignment and domain information
>PRK05962 amidase; Validated Back     alignment and domain information
>PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed Back     alignment and domain information
>PRK07235 amidase; Provisional Back     alignment and domain information
>TIGR00132 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit Back     alignment and domain information
>TIGR02715 amido_AtzE amidohydrolase, AtzE family Back     alignment and domain information
>PRK06102 hypothetical protein; Provisional Back     alignment and domain information
>PRK07056 amidase; Provisional Back     alignment and domain information
>PRK07486 amidase; Provisional Back     alignment and domain information
>PRK09201 amidase; Provisional Back     alignment and domain information
>PRK07488 indole acetimide hydrolase; Validated Back     alignment and domain information
>PRK07487 amidase; Provisional Back     alignment and domain information
>PRK07869 amidase; Provisional Back     alignment and domain information
>PRK06169 putative amidase; Provisional Back     alignment and domain information
>PRK08137 amidase; Provisional Back     alignment and domain information
>PRK06170 amidase; Provisional Back     alignment and domain information
>PRK07139 amidase; Provisional Back     alignment and domain information
>PRK12470 amidase; Provisional Back     alignment and domain information
>PRK07042 amidase; Provisional Back     alignment and domain information
>PRK08186 allophanate hydrolase; Provisional Back     alignment and domain information
>TIGR02713 allophanate_hyd allophanate hydrolase Back     alignment and domain information
>PRK06529 amidase; Provisional Back     alignment and domain information
>PRK06061 amidase; Provisional Back     alignment and domain information
>PRK06828 amidase; Provisional Back     alignment and domain information
>PRK11910 amidase; Provisional Back     alignment and domain information
>PRK06565 amidase; Validated Back     alignment and domain information
>PRK06707 amidase; Provisional Back     alignment and domain information
>KOG1211 consensus Amidases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1212 consensus Amidases [Translation, ribosomal structure and biogenesis; Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query239
3h0l_A 478 Structure Of Trna-Dependent Amidotransferase Gatcab 1e-18
3kfu_E 471 Crystal Structure Of The Transamidosome Length = 47 1e-17
2dc0_A 434 Crystal Structure Of Amidase Length = 434 2e-16
4gyr_A 621 Granulibacter Bethesdensis Allophanate Hydrolase Ap 4e-15
3al0_A 475 Crystal Structure Of The Glutamine Transamidosome F 4e-15
2df4_A 485 Structure Of Trna-Dependent Amidotransferase Gatcab 6e-15
2gi3_A 476 Crystal Structure Of Glutamyl-Trna(Gln) Amidotransf 6e-14
3a1k_A 521 Crystal Structure Of Rhodococcus Sp. N771 Amidase L 1e-12
3a1i_A 521 Crystal Structure Of Rhodococcus Sp. N-771 Amidase 2e-12
1obl_A 414 Crystal Structure Of The S133a Mutant Of Malonamida 4e-11
1o9o_A 414 Crystal Structure Of The S131a Mutant Of Malonamida 4e-11
1obk_A 414 Crystal Structure Of The R158q Mutant Of Malonamida 2e-10
1ock_A 412 The Crystal Structure Of Malonamidase E2 From Brady 3e-10
1obi_A 414 Crystal Structure Of The G130a Mutant Of Malonamida 3e-10
1o9q_A 414 Crystal Structure Of The S155c Mutant Of Malonamida 8e-10
1obj_A 414 Crystal Structure Of The T150a Mutant Of Malonamida 9e-10
1o9n_A 414 Crystal Structure Of The K62a Mutant Of Malonamidas 1e-09
3a2p_A 493 Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolas 2e-08
1m21_A 503 Crystal Structure Analysis Of The Peptide Amidase P 3e-08
3a2q_A 493 Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolas 5e-08
2wap_A 543 3d-Crystal Structure Of Humanized-Rat Fatty Acid Am 3e-07
2vya_A 587 Crystal Structure Of Fatty Acid Amide Hydrolase Con 3e-07
2wj1_A 573 3d-Crystal Structure Of Humanized-Rat Fatty Acid Am 4e-07
4hbp_A 550 Crystal Structure Of Faah In Complex With Inhibitor 7e-07
1mt5_A 537 Crystal Structure Of Fatty Acid Amide Hydrolase Len 7e-07
4do3_A 571 Structure Of Faah With A Non-steroidal Anti-inflamm 8e-07
3qk5_A 587 Crystal Structure Of Fatty Acid Amide Hydrolase Wit 9e-07
>pdb|3H0L|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus Length = 478 Back     alignment and structure 
Iteration: 1

 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
Query: 9   SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 68
           S    +LPL G+  A+KD   V+G  T   +      +  A   A  +  +   GA  +G
Sbjct: 56  SLKERELPLFGIPIAVKDNILVEGEKTTCASK--ILENFVAPYDATVIERLKKAGALIVG 113
Query: 69  KTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVR 128
           KT +DE A   + E   +    NPW  +RVP                  SLG+DTGGS+R
Sbjct: 114 KTNLDEFAMGSSTEYSAFFPTKNPWDLERVPGGSSGGSAASVAVLSAPVSLGSDTGGSIR 173
Query: 129 VPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWF 164
            PAS+CG+ G +P++G VS  G++  A S D +G F
Sbjct: 174 QPASFCGVIGIKPTYGRVSRYGLVAFASSLDQIGVF 209
>pdb|3KFU|E Chain E, Crystal Structure Of The Transamidosome Length = 471 Back     alignment and structure
>pdb|2DC0|A Chain A, Crystal Structure Of Amidase Length = 434 Back     alignment and structure
>pdb|4GYR|A Chain A, Granulibacter Bethesdensis Allophanate Hydrolase Apo Length = 621 Back     alignment and structure
>pdb|3AL0|A Chain A, Crystal Structure Of The Glutamine Transamidosome From Thermotoga Maritima In The Glutamylation State Length = 475 Back     alignment and structure
>pdb|2DF4|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab Complexed With Mn2+ Length = 485 Back     alignment and structure
>pdb|2GI3|A Chain A, Crystal Structure Of Glutamyl-Trna(Gln) Amidotransferase Subunit A (Tm1272) From Thermotoga Maritima At 1.80 A Resolution Length = 476 Back     alignment and structure
>pdb|3A1K|A Chain A, Crystal Structure Of Rhodococcus Sp. N771 Amidase Length = 521 Back     alignment and structure
>pdb|3A1I|A Chain A, Crystal Structure Of Rhodococcus Sp. N-771 Amidase Complexed With Benzamide Length = 521 Back     alignment and structure
>pdb|1OBL|A Chain A, Crystal Structure Of The S133a Mutant Of Malonamidase E2 Complexed With Malonate From Bradyrhizobium Japonicum Length = 414 Back     alignment and structure
>pdb|1O9O|A Chain A, Crystal Structure Of The S131a Mutant Of Malonamidase E2 Complexed With Malonamate From Bradyrhizobium Japonicum Length = 414 Back     alignment and structure
>pdb|1OBK|A Chain A, Crystal Structure Of The R158q Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 Back     alignment and structure
>pdb|1OCK|A Chain A, The Crystal Structure Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 412 Back     alignment and structure
>pdb|1OBI|A Chain A, Crystal Structure Of The G130a Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 Back     alignment and structure
>pdb|1O9Q|A Chain A, Crystal Structure Of The S155c Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 Back     alignment and structure
>pdb|1OBJ|A Chain A, Crystal Structure Of The T150a Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 Back     alignment and structure
>pdb|1O9N|A Chain A, Crystal Structure Of The K62a Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 Back     alignment and structure
>pdb|3A2P|A Chain A, Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolase Length = 493 Back     alignment and structure
>pdb|1M21|A Chain A, Crystal Structure Analysis Of The Peptide Amidase Pam In Complex With The Competitive Inhibitor Chymostatin Length = 503 Back     alignment and structure
>pdb|3A2Q|A Chain A, Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolase Complexed With Substrate Length = 493 Back     alignment and structure
>pdb|2WAP|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide Hydrolase (Faah) Conjugated With The Drug-Like Urea Inhibitor Pf-3845 Length = 543 Back     alignment and structure
>pdb|2VYA|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase Conjugated With The Drug-Like Inhibitor Pf-750 Length = 587 Back     alignment and structure
>pdb|2WJ1|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide Hydrolase (Faah) Conjugated With 7-Phenyl-1-(4-(Pyridin-2- Yl)oxazol-2-Yl)heptan-1-One, An Alpha-Ketooxazole Length = 573 Back     alignment and structure
>pdb|4HBP|A Chain A, Crystal Structure Of Faah In Complex With Inhibitor Length = 550 Back     alignment and structure
>pdb|1MT5|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase Length = 537 Back     alignment and structure
>pdb|4DO3|A Chain A, Structure Of Faah With A Non-steroidal Anti-inflammatory Drug Length = 571 Back     alignment and structure
>pdb|3QK5|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase With Small Molecule Inhibitor Length = 587 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query239
1o9p_A 414 Malonamidase E2; malonate; 1.8A {Bradyrhizobium ja 9e-55
2dc0_A 434 Probable amidase; structural genomics, NPPSFA, nat 7e-50
3a1k_A 521 Amidase; AS family enzyme, hydrolase; 2.17A {Rhodo 3e-47
3a2q_A 493 6-aminohexanoate-cyclic-dimer hydrolase; alpha/bet 5e-46
1m22_A 503 Peptide amidase, PAM; eleven-stranded beta sheet, 5e-43
3kfu_E 471 Glutamyl-tRNA(Gln) amidotransferase subunit A; ASP 5e-41
3ip4_A 485 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 1e-40
3h0l_A 478 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 1e-40
2gi3_A 476 Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1 2e-40
3ppm_A 573 Fatty-acid amide hydrolase 1; protein-inhibitor co 4e-40
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A Length = 414 Back     alignment and structure
 Score =  180 bits (458), Expect = 9e-55
 Identities = 56/152 (36%), Positives = 71/152 (46%), Gaps = 8/152 (5%)

Query: 16  PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 75
           PL G+   IKDI D     T  G+  +      + +    +L     GAT IGKT     
Sbjct: 53  PLRGIAVGIKDIIDTANMPTEMGSEIYRGWQPRSDAPVVMMLK--RAGATIIGKTTTTAF 110

Query: 76  AYSINGENKHYGTPTNPWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 135
           A              NP      PGG+SSGSA AVGA ++  +LGT TGGSV  PA+YCG
Sbjct: 111 ASR------DPTATLNPHNTGHSPGGASSGSAAAVGAGMIPLALGTQTGGSVIRPAAYCG 164

Query: 136 IFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWD 167
               +PS   + T GV   + + DTVG F   
Sbjct: 165 TAAIKPSFRMLPTVGVKCYSWALDTVGLFGAR 196
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus} Length = 434 Back     alignment and structure
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A Length = 521 Back     alignment and structure
>3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A Length = 493 Back     alignment and structure
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A* Length = 503 Back     alignment and structure
>3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus} Length = 471 Back     alignment and structure
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A Length = 485 Back     alignment and structure
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A* Length = 478 Back     alignment and structure
>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A* Length = 476 Back     alignment and structure
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A* Length = 573 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query239
3ip4_A 485 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 100.0
2gi3_A 476 Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1 100.0
2dc0_A 434 Probable amidase; structural genomics, NPPSFA, nat 100.0
3a1k_A 521 Amidase; AS family enzyme, hydrolase; 2.17A {Rhodo 100.0
1m22_A 503 Peptide amidase, PAM; eleven-stranded beta sheet, 100.0
3h0l_A 478 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 100.0
3kfu_E 471 Glutamyl-tRNA(Gln) amidotransferase subunit A; ASP 100.0
3a2q_A 493 6-aminohexanoate-cyclic-dimer hydrolase; alpha/bet 100.0
1o9p_A 414 Malonamidase E2; malonate; 1.8A {Bradyrhizobium ja 100.0
3ppm_A 573 Fatty-acid amide hydrolase 1; protein-inhibitor co 100.0
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: c.117.1.1 PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A Back     alignment and structure
Probab=100.00  E-value=9.9e-62  Score=462.07  Aligned_cols=218  Identities=31%  Similarity=0.421  Sum_probs=189.6

Q ss_pred             CCCCCCCCccccEEEeecCCCCCCccCCCCcHhhhhcCCCCCCcHHHHHHHHhCCCEEEeccChhhccccCCCCCCCCCC
Q 037166            9 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGT   88 (239)
Q Consensus         9 ~~~~~~gpL~Gvpi~vKD~i~v~G~~tt~Gs~~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~~~~~G~   88 (239)
                      ..++. ||||||||+|||+|+++|++||+||..+.++  ++.+|+++|+||+++|||++|||||+||+++..+.|+.||+
T Consensus        64 ~~g~~-gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~--~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~t~n~~~G~  140 (485)
T 3ip4_A           64 KDQMD-GKLFGIPMGIKDNIITNGLETTCASKMLEGF--VPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKK  140 (485)
T ss_dssp             TTCCC-STTTTCEEEEETTBCBTTBCCCTTSGGGTTC--CCSSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCSSCC
T ss_pred             hcCCC-CCcCCCEEEEEcCcccCCCccCCCChhhcCC--CCCCCcHHHHHHHHCCCEEEEecCCcccccCCCCCCCCCCC
Confidence            44666 9999999999999999999999999988764  67899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCchhhhhhhcCCCcccccccCCCCccccccccCccccccCCCcccCCCCCCCCCCCcccccccCCH
Q 037166           89 PTNPWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDP  168 (239)
Q Consensus        89 ~~NP~~~~~~~GGSSgGsaaava~g~~~~alGtD~~GSiR~PA~~~Gv~glkPT~g~is~~G~~p~~~s~d~~G~~ar~~  168 (239)
                      |+||||+.++||||||||||+||+|++++++|||+|||||+||+||||||||||+|++|+.|++|+++++|++|||+|++
T Consensus       141 t~NP~~~~~~pGGSSgGsAaaVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~Grvs~~G~~p~~~sld~~Gp~aRsv  220 (485)
T 3ip4_A          141 TVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNV  220 (485)
T ss_dssp             CCBTTBTTBCCCSSSHHHHHHHHTTSCSEEEEECSSSTTHHHHHHTTCEEEECCTTSBCCTTBCCSCTTTCCEEEEESSH
T ss_pred             cCCccccCcCCCCCccHHHHHhhcCCCceeeeccCCcchhhhHHHhCCeeecCCCCcccCCCCCCcccccceeccccCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCC----------------CCCCcEEEEecCCccCCCCccHHHHHHHHHHHHHH--hCCCCcccc
Q 037166          169 KILNRVGRVLLQLPDDAS----------------LVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKL--FGDCRECDS  230 (239)
Q Consensus       169 ~~l~~~~~~~~~~~~~~~----------------~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~al~~~--~~~~~~~~~  230 (239)
                      +|++.++++|.+.+..++                ..+..||+++.+++..  ..+.++.+.+.+++++|  +|.+.+.+.
T Consensus       221 ~D~a~~l~vl~g~d~~d~~~~~~~~~~~~~~~~~~~~~lrigv~~~~~~~--~~~~~v~~a~~~a~~~L~~~G~~v~~~~  298 (485)
T 3ip4_A          221 KDNAIVLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKVALPKEYLGE--GVADDVKEAVQNAVETLKSLGAVVEEVS  298 (485)
T ss_dssp             HHHHHHHHHHBSCCTTCTTSCCCCCCCCSTTTTCCCTTCEEEEEGGGGST--TSCHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHhcCCCcccccccccCccchhhhhccCccCcEEEEECCcccC--CCCHHHHHHHHHHHHHHHHCCCEEEEeC
Confidence            999999999988765432                1356789999876532  13444445555555444  565544444


Q ss_pred             c
Q 037166          231 W  231 (239)
Q Consensus       231 ~  231 (239)
                      .
T Consensus       299 ~  299 (485)
T 3ip4_A          299 L  299 (485)
T ss_dssp             C
T ss_pred             C
Confidence            3
>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A* Back     alignment and structure
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus} Back     alignment and structure
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A Back     alignment and structure
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A* Back     alignment and structure
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A* Back     alignment and structure
>3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus} Back     alignment and structure
>3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A Back     alignment and structure
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A Back     alignment and structure
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 239
d2f2aa1 485 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransf 2e-37
d2gi3a1 475 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransf 3e-37
d1m22a_ 490 c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomon 2e-18
d1mt5a_ 537 c.117.1.1 (A:) Fatty acid amide hydrolase (oleamid 9e-16
d1ocka_ 412 c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium jap 2e-12
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]} Length = 485 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Amidase signature (AS) enzymes
superfamily: Amidase signature (AS) enzymes
family: Amidase signature (AS) enzymes
domain: Glutamyl-tRNA(Gln) amidotransferase subunit A
species: Staphylococcus aureus [TaxId: 1280]

 Score =  134 bits (337), Expect = 2e-37
 Identities = 59/152 (38%), Positives = 77/152 (50%), Gaps = 2/152 (1%)

Query: 16  PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 75
            L G+   IKD    +G  T   +           ST    L      A  IGK  MDE 
Sbjct: 70  KLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKE--NAVLIGKLNMDEF 127

Query: 76  AYSINGENKHYGTPTNPWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 135
           A   + E  ++    NP+    VPGGSS GSA AV A LV  SLG+DTGGS+R PA+YCG
Sbjct: 128 AMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCG 187

Query: 136 IFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWD 167
           + G +P++G VS  G++  A S D +G    +
Sbjct: 188 VVGMKPTYGRVSRFGLVAFASSLDQIGPLTRN 219
>d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase subunit A {Thermotoga maritima [TaxId: 2336]} Length = 475 Back     information, alignment and structure
>d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas maltophilia [TaxId: 40324]} Length = 490 Back     information, alignment and structure
>d1mt5a_ c.117.1.1 (A:) Fatty acid amide hydrolase (oleamide hydrolase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 537 Back     information, alignment and structure
>d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} Length = 412 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query239
d2gi3a1 475 Glutamyl-tRNA(Gln) amidotransferase subunit A {The 100.0
d2f2aa1 485 Glutamyl-tRNA(Gln) amidotransferase subunit A {Sta 100.0
d1mt5a_ 537 Fatty acid amide hydrolase (oleamide hydrolase) {R 100.0
d1m22a_ 490 Peptide amidase Pam {Stenotrophomonas maltophilia 100.0
d1ocka_ 412 Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 100.0
>d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase subunit A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Amidase signature (AS) enzymes
superfamily: Amidase signature (AS) enzymes
family: Amidase signature (AS) enzymes
domain: Glutamyl-tRNA(Gln) amidotransferase subunit A
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.6e-60  Score=443.48  Aligned_cols=218  Identities=29%  Similarity=0.409  Sum_probs=188.9

Q ss_pred             CCCCCCCccccEEEeecCCCCCCccCCCCcHhhhhcCCCCCCcHHHHHHHHhCCCEEEeccChhhccccCCCCCCCCCCC
Q 037166           10 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTP   89 (239)
Q Consensus        10 ~~~~~gpL~Gvpi~vKD~i~v~G~~tt~Gs~~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~~~~~G~~   89 (239)
                      .-..+||||||||+|||+|+++|++||+|+..|.++  ++.+|+++|++|+++|||++|||||+||+++..+.|..||+|
T Consensus        51 a~~~~gpL~GvPi~vKD~~~~~g~~tt~Gs~~~~~~--~~~~da~~v~~L~~aGaii~Gktn~~e~~~~~~~~~~~~G~t  128 (475)
T d2gi3a1          51 SVEKKGKFWGIPVAIKDNILTLGMRTTCASRILENY--ESVFDATVVKKMKEAGFVVVGKANLDEFAMGSSTERSAFFPT  128 (475)
T ss_dssp             CCCCCSTTTTCEEEEETTBCCSSSCCCTTCGGGTTC--CCCSCCHHHHHHHHHTCEEEEEECCSGGGCCSSSTTCSSCCC
T ss_pred             hhhccCCCCCCEEEEEcccCCCCCccCccChhhcCC--CCCCCcceeeehhhcCCccccccchhhcccccccccchhccc
Confidence            356679999999999999999999999999999875  688999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCchhhhhhhcCCCcccccccCCCCccccccccCccccccCCCcccCCCCCCCCCCCcccccccCCHH
Q 037166           90 TNPWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPK  169 (239)
Q Consensus        90 ~NP~~~~~~~GGSSgGsaaava~g~~~~alGtD~~GSiR~PA~~~Gv~glkPT~g~is~~G~~p~~~s~d~~G~~ar~~~  169 (239)
                      +||||+.+++|||||||||+||++++++++|||+|||||+||+||||||||||+|++|+.|++|+++++|++|||||+++
T Consensus       129 ~nP~~~~~~~GGSSgGsaaavAag~~~~a~GtD~gGSiR~PA~~~Gv~G~kPt~G~i~~~g~~~~~~~~d~~GpmaRsv~  208 (475)
T d2gi3a1         129 RNPWDLERVPGGSSGGSAAAVSAGMVVAALGSDTGGSVRQPASLCGVVGYKPTYGLVSRYGLVAFASSLDQIGPITKTVR  208 (475)
T ss_dssp             CBTTBTTBCCCSSSHHHHHHHHTTSSSEEEEEESSSTTHHHHHHHTSEEEECCTTSBCCTTBCCSCTTTCEEEEEESSHH
T ss_pred             ccccccccccCcccccchhhhhhcCcceEeecCCCccchhhhHHhCceeecCCCCCCCCCCCCCCCCCCCccCCccCCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCC---------------CCCCcEEEEecCCccCCCCccHHHHHHHHHHHHHH--hCCCCccccc
Q 037166          170 ILNRVGRVLLQLPDDAS---------------LVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKL--FGDCRECDSW  231 (239)
Q Consensus       170 ~l~~~~~~~~~~~~~~~---------------~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~al~~~--~~~~~~~~~~  231 (239)
                      |++.+++++.+.+..++               ..+..++++..+.+...  .+.++.+.+.++++.|  +|.+.+.+..
T Consensus       209 D~alll~v~~g~d~~d~~s~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~--~~~~v~~a~~~a~~~L~~~G~~V~ev~~  285 (475)
T d2gi3a1         209 DAAILMEIISGRDENDATTVNRKVDFLSEIEEGVSGMKFAVPEEIYEHD--IEEGVSERFEEALKLLERLGAKVERVKI  285 (475)
T ss_dssp             HHHHHHHHHBSCBTTBTTCCSCCCCSSTTTTSCCTTCEEEEEGGGGGSC--CCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred             HHHHHhhhhhccccccccccccccccchhccccccccceeeeeccccCC--CCHHHHHHHHHHHHHHHHCCCEEEEeCC
Confidence            99999999987654331               23567888887655422  2344444444444444  4555544443
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1mt5a_ c.117.1.1 (A:) Fatty acid amide hydrolase (oleamide hydrolase) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas maltophilia [TaxId: 40324]} Back     information, alignment and structure
>d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} Back     information, alignment and structure