Citrus Sinensis ID: 037287
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 336 | ||||||
| 224138372 | 360 | predicted protein [Populus trichocarpa] | 0.994 | 0.927 | 0.682 | 1e-124 | |
| 449456773 | 358 | PREDICTED: uncharacterized protein LOC10 | 0.988 | 0.927 | 0.636 | 1e-119 | |
| 449527290 | 359 | PREDICTED: LOW QUALITY PROTEIN: uncharac | 0.988 | 0.924 | 0.631 | 1e-118 | |
| 147856621 | 381 | hypothetical protein VITISV_038296 [Viti | 0.976 | 0.860 | 0.609 | 1e-116 | |
| 255557711 | 364 | conserved hypothetical protein [Ricinus | 0.994 | 0.917 | 0.656 | 1e-116 | |
| 225427518 | 353 | PREDICTED: uncharacterized protein LOC10 | 0.976 | 0.929 | 0.662 | 1e-115 | |
| 357484645 | 358 | hypothetical protein MTR_5g026910 [Medic | 0.994 | 0.932 | 0.594 | 1e-114 | |
| 356531497 | 357 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.932 | 0.594 | 1e-111 | |
| 255587523 | 350 | conserved hypothetical protein [Ricinus | 0.967 | 0.928 | 0.585 | 1e-106 | |
| 388513247 | 356 | unknown [Lotus japonicus] | 0.988 | 0.932 | 0.6 | 1e-104 |
| >gi|224138372|ref|XP_002326586.1| predicted protein [Populus trichocarpa] gi|222833908|gb|EEE72385.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 247/362 (68%), Positives = 276/362 (76%), Gaps = 28/362 (7%)
Query: 1 MDLFLKRMNEDAAECSFNDGDILKCPFLRNINKPTSFSFSSVNFPLPERGAKGPIFEDGP 60
MD L+ NED +EC F+D DI +CPFLRNINKPTSFSFS VNF P +GAKGPIFEDGP
Sbjct: 1 MDFLLEGTNEDTSECHFDDKDIQRCPFLRNINKPTSFSFSPVNFLNPVQGAKGPIFEDGP 60
Query: 61 NFGMAFKLFHGKDGVVPLSGRSYSHNDN-EPEPISQFNPLGTKVATISLSAFSPGGPFSF 119
NFGMAFKLFHGKDGVVPLS +S H++ EP P QFNPL K ATISLSAF GGPF F
Sbjct: 61 NFGMAFKLFHGKDGVVPLSIQSSFHDNTLEPGPAPQFNPLAAKAATISLSAFGLGGPFGF 120
Query: 120 GPFNDKWKKQQKKSEI--PNNREPSSQNQNSSKHEASGNDWLETGNCPIAKSYRAVSGVL 177
G FNDKWK Q+KKSE + +EPSSQ N+SKHEA GN+WLETG+CPIAKSYRAVS VL
Sbjct: 121 GSFNDKWKNQKKKSESESASKKEPSSQQGNTSKHEAMGNEWLETGSCPIAKSYRAVSRVL 180
Query: 178 PIVAKAFQPPPGLKLRCPPA--------------------PLPAKMLVIALMGMAVNVPL 217
P+VA QPPP +KLRCPPA PLPAKMLVIAL+GMAVNVPL
Sbjct: 181 PLVASTLQPPPSMKLRCPPAIVAARAALARTALVKNLRPQPLPAKMLVIALLGMAVNVPL 240
Query: 218 GVWKEHTRKFSLSWFAAVHAAVPFIAMLRKSVVMPKEAMALTIGASILGQVIGSRAERQR 277
G+WKEHT KFSL WFAAVHAAVPFIAMLRKSV+MPK AMALTIGASILGQ+IGSRAER R
Sbjct: 241 GMWKEHTEKFSLQWFAAVHAAVPFIAMLRKSVLMPKTAMALTIGASILGQIIGSRAERHR 300
Query: 278 LKAVAEREGVATQTDIAATVTGYSPSQVN---GSHCGTEGKSWDSLSVEPGRSTSSSANV 334
LK VA +E + +T IAA V YSPSQV+ GS+CGTE SWD L ++ S SS++ V
Sbjct: 301 LKTVASKERLKVKTAIAAAVDRYSPSQVSGNAGSNCGTE-MSWDPLLIKASGSKSSTS-V 358
Query: 335 CF 336
CF
Sbjct: 359 CF 360
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449456773|ref|XP_004146123.1| PREDICTED: uncharacterized protein LOC101211606 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449527290|ref|XP_004170645.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101211606 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|147856621|emb|CAN82476.1| hypothetical protein VITISV_038296 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255557711|ref|XP_002519885.1| conserved hypothetical protein [Ricinus communis] gi|223540931|gb|EEF42489.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|225427518|ref|XP_002264517.1| PREDICTED: uncharacterized protein LOC100261262 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357484645|ref|XP_003612610.1| hypothetical protein MTR_5g026910 [Medicago truncatula] gi|355513945|gb|AES95568.1| hypothetical protein MTR_5g026910 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356531497|ref|XP_003534314.1| PREDICTED: uncharacterized protein LOC100811917 [Glycine max] | Back alignment and taxonomy information |
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| >gi|255587523|ref|XP_002534301.1| conserved hypothetical protein [Ricinus communis] gi|223525545|gb|EEF28083.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|388513247|gb|AFK44685.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 336 | ||||||
| TAIR|locus:2163563 | 342 | AT5G45410 "AT5G45410" [Arabido | 0.919 | 0.903 | 0.514 | 3.6e-73 | |
| TAIR|locus:2117293 | 344 | AT4G25030 "AT4G25030" [Arabido | 0.907 | 0.886 | 0.454 | 4.8e-62 | |
| UNIPROTKB|Q74FH0 | 85 | GSU0639 "Uncharacterized prote | 0.214 | 0.847 | 0.305 | 1.5e-07 | |
| TIGR_CMR|GSU_0639 | 85 | GSU_0639 "hypothetical protein | 0.214 | 0.847 | 0.305 | 1.5e-07 |
| TAIR|locus:2163563 AT5G45410 "AT5G45410" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 173/336 (51%), Positives = 208/336 (61%)
Query: 22 ILKCPFLRNINKPTSFSFSSVNFPLPERGAKGPIFEDGPNFGMAFKLFHGKDGVVPLSGR 81
I KCPFLRNINKPT+ SFSS++FP+P +G KGPIFEDGP F AFKLFHGKDG+VPLSG
Sbjct: 13 IQKCPFLRNINKPTNLSFSSLSFPIPVQGGKGPIFEDGPGFDSAFKLFHGKDGIVPLSGF 72
Query: 82 SYSHNDNEPEPISQFNPLGTKVATISLXXXXXXXXXXXXXXNDKWKKQQKKSEIPNNREP 141
+ D QFNPL KVATISL ++KWKKQQKK + N++
Sbjct: 73 ADDSEDEAGRRALQFNPLAGKVATISLSAFGPGGPFGFGPFSEKWKKQQKKPKPSKNQQS 132
Query: 142 SSQNQNSSKHEA---SGNDWLETGNCPIAKSYRAVSGVL------------PIVA-KAFQ 185
+++ + + +GN + +K +S L PIVA +A
Sbjct: 133 GDSSKHEAVGDEWLKTGNCPIAKSFRAASKVMPLISKALTLPPGMKYRCPAPIVAARAAL 192
Query: 186 PPPGLKLRCPPAPLPAKMLVIALMGMAVNVPLGVWKEHTRKFSLSWFAAVHAAVPFIAML 245
L P PLP KML IALMGMA NVPLGVW+EHT+KFS +WF AVHAAVPFIAML
Sbjct: 193 SKTALVKSLRPQPLPEKMLAIALMGMAANVPLGVWREHTKKFSPAWFLAVHAAVPFIAML 252
Query: 246 RKSVVMPKEAMALTIGASILGQVIGSRAERQRLKAVAEREGVATQTDIAATVTGY--SP- 302
RKSV+MPK AMALTIGASILGQVIGSRAER RLKAVAE+ + A V+GY SP
Sbjct: 253 RKSVLMPKTAMALTIGASILGQVIGSRAERYRLKAVAEK-----MVPVTAMVSGYNQSPG 307
Query: 303 -SQVNGSHCGT-EGKSWDSLSVEPGRSTSSSANVCF 336
S ++G HCG EG +V G S S+ +C+
Sbjct: 308 DSGISGGHCGIGEGVKQVYYNVNIGESAKSTG-LCY 342
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| TAIR|locus:2117293 AT4G25030 "AT4G25030" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q74FH0 GSU0639 "Uncharacterized protein" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
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| TIGR_CMR|GSU_0639 GSU_0639 "hypothetical protein" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00