Citrus Sinensis ID: 037606

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-----
Protein Sequence
MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASVVVGFCNIKLLPMLAVGMLFWPTIAELIHRTRHVHHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDEEDQNHKCEYGQVFTTDYDAKGQGDV
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHcccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEccccccccccc
Coil and Loop (DISEMBL)
mvltggvlgvkSSILGIAaenrkvhpefHRLQQelslgtyssdstIILGFLSIVALTASVVVGFCNIKLLPMLAVGMLFWPTIAELIHRTrhvhhnmstirptaktglfgGAAFMALNASLFWLICLMLADnarddyfdeedqnhkceygqvfttdydakgqgdv
Flexible Loop (DISEMBL)
mvltggvlgvkssiLGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASVVVGFCNIKLLPMLAVGMLFWPTIAELIHRTRHVHHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDEEDQNHkceygqvfttdydakgqgdv
Low Complexity Region (SEG)
MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASVVVGFCNIKLLPMLAVGMLFWPTIAELIHRTRHVHHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDEEDQNHKCEYGQVFTTDYDAKGQGDV
Disordered region (IsUnstruct)
****GGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASVVVGFCNIKLLPMLAVGMLFWPTIAELIHRTRHVHHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDEEDQNHKCEYGQVFTTD*********
Disordered Region (DISOPRED)
*VLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASVVVGFCNIKLLPMLAVGMLFWPTIAELIHRTRHVHHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDEEDQNHKCEYGQVFTTDYD*******
Disordered Region (DISEMBL)
MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASVVVGFCNIKLLPMLAVGMLFWPTIAELIHRTRHVHHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDEEDQNHKCEYGQVFTTDYDAKGQGDV
Disordered Region (DISPRO)
MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASVVVGFCNIKLLPMLAVGMLFWPTIAELIHRTRHVHHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDEEDQNHKCEYGQVFTTDYDA******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASVVVGFCNIKLLPMLAVGMLFWPTIAELIHRTRHVHHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDEEDQNHKCEYGQVFTTDYDAKGQGDV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
255544464	199	conserved hypothetical protein [Ricinus	1.0	0.829	0.479	2e-38
224097313	219	predicted protein [Populus trichocarpa]	0.939	0.707	0.478	1e-35
225429884	201	PREDICTED: uncharacterized protein LOC10	0.969	0.796	0.395	9e-30
296081817	597	unnamed protein product [Vitis vinifera]	0.969	0.268	0.395	2e-29
255560207	193	conserved hypothetical protein [Ricinus	0.903	0.772	0.414	9e-29
147783101	275	hypothetical protein VITISV_039944 [Viti	0.969	0.581	0.390	6e-28
449505490	189	PREDICTED: uncharacterized LOC101222863	0.848	0.740	0.413	7e-27
449437098	189	PREDICTED: uncharacterized protein LOC10	0.848	0.740	0.413	9e-27
449437094	190	PREDICTED: uncharacterized protein LOC10	0.848	0.736	0.437	5e-26
297798858	195	hypothetical protein ARALYDRAFT_491631 [	0.872	0.738	0.418	7e-26

>gi|255544464|ref|XP_002513293.1| conserved hypothetical protein [Ricinus communis] gi|223547201|gb|EEF48696.1| conserved hypothetical protein [Ricinus communis]

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/192 (47%), Positives = 111/192 (57%), Gaps = 27/192 (14%)

Query: 1   MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASV 60
           M +T   LG+ +   GI AE  K           +    Y SD + I GFLSI  LTAS 
Sbjct: 8   MAITVVALGITAFTFGILAEQNKPDSGKSLNSNGVITCKYPSDPSPIYGFLSIAFLTASS 67

Query: 61  VVG------------------FCNIKLL---------PMLAVGMLFWPTIAELIHRTRHV 93
           V+G                  FC+  +L           LA GML W T+AEL+H T +V
Sbjct: 68  VIGSYSIFHPYKGRSVPLKDLFCSTTMLVFFQIAVWVSFLAEGMLVWTTVAELVHLTNNV 127

Query: 94  HHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDEEDQNHKCEYGQVF 153
           H + +T  PTAKTGLFGGAAFMALNASLFWL+CLMLADNARDDYF+E+++NH+  YGQV 
Sbjct: 128 HRDANTKCPTAKTGLFGGAAFMALNASLFWLVCLMLADNARDDYFNEDEENHEGHYGQVL 187

Query: 154 TTDYDAKGQGDV 165
           T DYD K Q  V
Sbjct: 188 TADYDVKEQAKV 199

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097313|ref|XP_002310904.1| predicted protein [Populus trichocarpa] gi|222853807|gb|EEE91354.1| predicted protein [Populus trichocarpa]

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/184 (47%), Positives = 107/184 (58%), Gaps = 29/184 (15%)

Query: 8   LGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASVVVGFCNI 67
           LGVK+ + GI AE +K       +   +    Y SD  +  GFLSI AL A  +VG C+I
Sbjct: 15  LGVKAFVFGILAEIKKPASGEASMSHGVVTCKYPSDPAVFFGFLSIAALIACTLVGICSI 74

Query: 68  ------KLLP---------------------MLAVGMLFWPTIAELIHRTRHVH-HNM-S 98
                 K +P                     MLA GML W T  ELIH T++VH HN+ S
Sbjct: 75  FYPYKGKSVPYKGLFHSTRMVVFFQIALSVSMLAGGMLLWATTTELIHLTKNVHRHNVDS 134

Query: 99  TIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDEEDQNHKCEYGQVFTTDYD 158
           T  PTAKTGLFGGAAF+AL+ASLFWL+CLML  NAR+DYFDE  +  K EYGQV  TDY+
Sbjct: 135 TYCPTAKTGLFGGAAFLALDASLFWLVCLMLTSNAREDYFDEAGEEQKGEYGQVLITDYE 194

Query: 159 AKGQ 162
             G+
Sbjct: 195 TAGE 198

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429884|ref|XP_002283541.1| PREDICTED: uncharacterized protein LOC100247379 [Vitis vinifera]

 Score =  134 bits (338), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 107/187 (57%), Gaps = 27/187 (14%)

Query: 1   MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASV 60
           M +    LG  S + G+ AEN+K       L++ + +  YSSD T++LG+LS+  L AS 
Sbjct: 8   MSIIVATLGTLSFMFGVIAENKKPDSGTATLREGVVICKYSSDPTVVLGYLSVAFLVAST 67

Query: 61  VVGFCNI------KLLPMLAV---------------------GMLFWPTIAELIHRTRHV 93
           V G+ ++      + +P  A+                      ML WPTI E +H  R+V
Sbjct: 68  VAGYLSLFYPYKGRSIPQAALFRSTSFLVFFNIALGMAGLAAAMLLWPTITEQLHLIRNV 127

Query: 94  HHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDEEDQNHKCEYGQVF 153
           HHN++T  PTAKTGL GG AF+AL+ASLFWL+ LMLADN R+DYF+  +++ K E  +V 
Sbjct: 128 HHNLNTTCPTAKTGLLGGGAFIALDASLFWLVSLMLADNVREDYFETVEKDPKGEQSEVL 187

Query: 154 TTDYDAK 160
           T +Y + 
Sbjct: 188 TNEYSSN 194

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081817|emb|CBI20822.3| unnamed protein product [Vitis vinifera]

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 107/187 (57%), Gaps = 27/187 (14%)

Query: 1   MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASV 60
           M +    LG  S + G+ AEN+K       L++ + +  YSSD T++LG+LS+  L AS 
Sbjct: 404 MSIIVATLGTLSFMFGVIAENKKPDSGTATLREGVVICKYSSDPTVVLGYLSVAFLVAST 463

Query: 61  VVGFCNI------KLLPMLAV---------------------GMLFWPTIAELIHRTRHV 93
           V G+ ++      + +P  A+                      ML WPTI E +H  R+V
Sbjct: 464 VAGYLSLFYPYKGRSIPQAALFRSTSFLVFFNIALGMAGLAAAMLLWPTITEQLHLIRNV 523

Query: 94  HHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDEEDQNHKCEYGQVF 153
           HHN++T  PTAKTGL GG AF+AL+ASLFWL+ LMLADN R+DYF+  +++ K E  +V 
Sbjct: 524 HHNLNTTCPTAKTGLLGGGAFIALDASLFWLVSLMLADNVREDYFETVEKDPKGEQSEVL 583

Query: 154 TTDYDAK 160
           T +Y + 
Sbjct: 584 TNEYSSN 590

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560207|ref|XP_002521121.1| conserved hypothetical protein [Ricinus communis] gi|223539690|gb|EEF41272.1| conserved hypothetical protein [Ricinus communis]

 Score =  131 bits (330), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 97/176 (55%), Gaps = 27/176 (15%)

Query: 1   MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASV 60
           M +  G+LG  S I G+ AEN+K         + + +  Y SD T+ LG+LS   L AS 
Sbjct: 8   MSIIVGILGALSFIFGVIAENKKPAAGTPITGKGVVICKYPSDPTVALGYLSFAFLVAST 67

Query: 61  VVGFCNI------KLLPM---------------------LAVGMLFWPTIAELIHRTRHV 93
           V G+ ++      K +P                      LA  +L WPTI E  H TR V
Sbjct: 68  VAGYLSLFYPYKGKSVPQSVLFQSASFSTFFSISLFTGGLAATLLLWPTITEQFHLTRKV 127

Query: 94  HHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDEEDQNHKCEY 149
           HHN+ T  PTAKTGL GG AF++L+++LFWL+ LMLADNAR+DYF+E +   K EY
Sbjct: 128 HHNLETTCPTAKTGLLGGGAFVSLDSALFWLVSLMLADNAREDYFEEVENECKPEY 183

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147783101|emb|CAN64246.1| hypothetical protein VITISV_039944 [Vitis vinifera]

 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 105/187 (56%), Gaps = 27/187 (14%)

Query: 1   MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASV 60
           M +    LG  S + G+ AEN+K         + + +  YSSD T++LG+LS+  L AS 
Sbjct: 82  MSIIVATLGTLSFMFGVIAENKKPDSGTAIQGKGVVICKYSSDPTVVLGYLSVAFLVAST 141

Query: 61  VVGFCNI------KLLPMLAV---------------------GMLFWPTIAELIHRTRHV 93
           V G+ ++      + +P  A+                      ML WPTI E +H  R+V
Sbjct: 142 VAGYLSLFYPYKGRSIPQAALFRSTSFLVFFNIALGMAGLAAAMLLWPTITEQLHLIRNV 201

Query: 94  HHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDEEDQNHKCEYGQVF 153
           HHN++T  PTAKTGL GG AF+AL+ASLFWL+ LMLADN R+DYF+  +++ K E  +V 
Sbjct: 202 HHNLNTTCPTAKTGLLGGGAFIALDASLFWLVSLMLADNVREDYFETVEKDPKGEQSEVL 261

Query: 154 TTDYDAK 160
           T +Y + 
Sbjct: 262 TNEYSSN 268

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449505490|ref|XP_004162486.1| PREDICTED: uncharacterized LOC101222863 [Cucumis sativus]

 Score =  125 bits (313), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 69/167 (41%), Positives = 94/167 (56%), Gaps = 27/167 (16%)

Query: 1   MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASV 60
           M L    LGV S I G+ AEN+K         + + +  Y  D T++LG+LS+  L AS 
Sbjct: 8   MSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGMVICQYPGDPTVVLGYLSVAFLLASS 67

Query: 61  VVGFCNI------KLLPM---------------------LAVGMLFWPTIAELIHRTRHV 93
             G+ ++      K +P                      LA+ +L WPT+ E +H TR+V
Sbjct: 68  AAGYLSLFYPYQGKSVPRGAMFKSSSFSTFFNIALFTTGLAITLLMWPTVTEQLHLTRNV 127

Query: 94  HHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDE 140
           HHN+ T  PTAKTGL GG AF++L++SLFWL+ LMLA NAR+DYFDE
Sbjct: 128 HHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDE 174

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437098|ref|XP_004136329.1| PREDICTED: uncharacterized protein LOC101222863 [Cucumis sativus]

 Score =  124 bits (312), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 69/167 (41%), Positives = 94/167 (56%), Gaps = 27/167 (16%)

Query: 1   MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASV 60
           M L    LGV S I G+ AEN+K         + + +  Y  D T++LG+LS+  L AS 
Sbjct: 8   MSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASS 67

Query: 61  VVGFCNI------KLLPM---------------------LAVGMLFWPTIAELIHRTRHV 93
             G+ ++      K +P                      LA+ +L WPT+ E +H TR+V
Sbjct: 68  AAGYLSLFYPYQGKSVPRGAMFKSSSFSTFFNIALFTTGLAITLLVWPTVTEQLHLTRNV 127

Query: 94  HHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDE 140
           HHN+ T  PTAKTGL GG AF++L++SLFWL+ LMLA NAR+DYFDE
Sbjct: 128 HHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDE 174

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437094|ref|XP_004136327.1| PREDICTED: uncharacterized protein LOC101222453 isoform 1 [Cucumis sativus] gi|449437096|ref|XP_004136328.1| PREDICTED: uncharacterized protein LOC101222453 isoform 2 [Cucumis sativus] gi|449505493|ref|XP_004162487.1| PREDICTED: uncharacterized LOC101222453 isoform 1 [Cucumis sativus] gi|449505496|ref|XP_004162488.1| PREDICTED: uncharacterized LOC101222453 isoform 2 [Cucumis sativus]

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 91/167 (54%), Gaps = 27/167 (16%)

Query: 1   MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASV 60
           M L  G LGV S + G+ AEN+K         +   +  Y SD T+ LGFLS + L AS 
Sbjct: 8   MSLLVGTLGVISFVFGVVAENKKPASGTPIPGKGHVVCKYQSDPTVALGFLSFMFLLASS 67

Query: 61  VVG--------------------------FCNIKLLPM-LAVGMLFWPTIAELIHRTRHV 93
             G                          F NI L    LA+ ML WPT+ E +H TR+V
Sbjct: 68  CAGYLSLFYPYEGKSVPRGAFFKSSTFFAFFNIALFTTGLAITMLVWPTVTEQLHLTRNV 127

Query: 94  HHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDE 140
           H N+ T  PTAKTGL GG AF++L++SLFWL+ LMLA NAR+DYFDE
Sbjct: 128 HFNLDTACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDE 174

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798858|ref|XP_002867313.1| hypothetical protein ARALYDRAFT_491631 [Arabidopsis lyrata subsp. lyrata] gi|297313149|gb|EFH43572.1| hypothetical protein ARALYDRAFT_491631 [Arabidopsis lyrata subsp. lyrata]

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 97/172 (56%), Gaps = 28/172 (16%)

Query: 1   MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASV 60
           M L    LGV S +LG+ AEN+K         + + +  Y SD T++LG+LS   L A  
Sbjct: 8   MSLVVSALGVLSFVLGVIAENKKPASGTPISGKGVVICKYPSDPTVVLGYLSAAFLLACT 67

Query: 61  VVG--------------------------FCNIKLLPM-LAVGMLFWPTIAELIHRTRHV 93
           V G                          F NI L+   LA+ +L WPTI E +H TR+V
Sbjct: 68  VAGYKSLFISYKGKSVPNSVLFKSTSFSVFFNIALITSGLALSLLLWPTITEQLHLTRNV 127

Query: 94  HHNMSTIRPTAKTGLFGGAAFMALNASLFWLICLMLADNARDDYFDE-EDQN 144
           H N+ +  PTAKTGL GG AF++L++ LFWL+ LMLADNAR+D+FDE E++N
Sbjct: 128 HRNLESSCPTAKTGLLGGGAFVSLDSCLFWLVALMLADNAREDHFDEVENRN 179

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
TAIR|locus:2126281	195	AT4G31130 "AT4G31130" [Arabido	0.533	0.451	0.555	1.4e-29

TAIR|locus:2126281 AT4G31130 "AT4G31130" [Arabidopsis thaliana (taxid:3702)]

 Score = 251 (93.4 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
 Identities = 50/90 (55%), Positives = 66/90 (73%)

Query:    52 SIVALTASVVVGFCNIKLLPM-LAVGMLFWPTIAELIHRTRHVHHNMSTIRPTAKTGLFG 110
             S++  + S  V F NI L+   LA+ +L WPTI E +H TR+VH N+ T  PTAKTGL G
Sbjct:    86 SVLFKSTSFSV-FFNIALITSGLALSLLLWPTITEQLHLTRNVHRNLETSCPTAKTGLLG 144

Query:   111 GAAFMALNASLFWLICLMLADNARDDYFDE 140
             G AF++L++ LFWL+ LMLADNAR+D+FDE
Sbjct:   145 GGAFVSLDSCLFWLVALMLADNAREDHFDE 174

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_VII001300 hypothetical protein (219 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	165
pfam06749	97	pfam06749, DUF1218, Protein of unknown function (D	3e-04

>gnl|CDD|219160 pfam06749, DUF1218, Protein of unknown function (DUF1218)

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 14/79 (17%)

Query: 44  STIILGFLSIVALTASVVVGFCNIKLLPMLAVGMLFWPTIAELIHRTRHVHHNMSTIRPT 103
              +     +++  A V+            A  +L         H   +VH   S    T
Sbjct: 33  KRALAVVCFVLSWIAFVI------------AFALLLAGAARNAYHTRYNVHFRPSC--YT 78

Query: 104 AKTGLFGGAAFMALNASLF 122
            K G+F   A ++L A+L 
Sbjct: 79  LKKGVFAAGAVLSLLAALL 97

This family contains hypothetical plant proteins of unknown function. Family members contain a number of conserved cysteine residues. Length = 97

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	165
PF06749	97	DUF1218: Protein of unknown function (DUF1218); In	99.34

>PF06749 DUF1218: Protein of unknown function (DUF1218); InterPro: IPR009606 This family contains hypothetical plant proteins of unknown function

Probab=99.34  E-value=1.3e-12  Score=96.74  Aligned_cols=69  Identities=23%  Similarity=0.286  Sum_probs=51.9

Q ss_pred             HHHHHHHHhhhchhh---hh-----------------------HH-HHHHHHHHHHHHHHHHhhhhhccccCCCCCCccc
Q 037606           52 SIVALTASVVVGFCN---IK-----------------------LL-PMLAVGMLFWPTIAELIHRTRHVHHNMSTIRPTA  104 (165)
Q Consensus        52 aa~~L~~s~v~G~~s---~f-----------------------~~-~~l~~~~l~W~t~~~~~~~~~n~~~~~~~~C~t~  104 (165)
                      |+++|+++|++++..   .|                       |+ ..++..+++|.+..|+.|.++|.+.  +++||++
T Consensus         2 A~~~L~~aqvi~~~~~gC~cc~~~~~~~~~~~r~~a~~~~v~SWi~f~ia~~~ll~ga~~n~~~~~~~~~~--~~~C~~~   79 (97)
T PF06749_consen    2 AAVFLLAAQVIANVAGGCLCCGKRVSPKSSRNRTLAVVFFVLSWIVFIIAEALLLAGASMNARHTKGNGWF--NPSCYTV   79 (97)
T ss_pred             HHHHHHHHHHHHHHHhcceEeCCCCCCcccccchhhhhhHHHHHHHHHHHHHHHHHHHhcccccccccccc--CCccccc
Confidence            678888888864432   11                       44 5555666677777777676666555  7789999


Q ss_pred             CCccchhHHHHHHHHHHH
Q 037606          105 KTGLFGGAAFMALNASLF  122 (165)
Q Consensus       105 K~GvFgGaAvLsL~a~lf  122 (165)
                      |+|+|+|||+|+|++++|
T Consensus        80 k~GvF~~~a~l~l~t~~f   97 (97)
T PF06749_consen   80 KKGVFAGGAVLSLVTALF   97 (97)
T ss_pred             CCceeeHhHHHHHHHHhC
Confidence            999999999999999875

Family members contain a number of conserved cysteine residues.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	165
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	4e-04

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 37.6 bits (86), Expect = 4e-04
 Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 8/34 (23%)

Query: 27 EFHRLQQELSLGTYSSDSTIILGFLSIVALTASV 60
             +LQ  L L  Y+ DS   L      A+ A++
Sbjct: 21 ALKKLQASLKL--YADDSAPAL------AIKATM 46

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00