Citrus Sinensis ID: 037643
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 332 | ||||||
| 224093419 | 334 | predicted protein [Populus trichocarpa] | 0.906 | 0.901 | 0.402 | 2e-48 | |
| 224093413 | 334 | predicted protein [Populus trichocarpa] | 0.978 | 0.973 | 0.375 | 9e-48 | |
| 449456675 | 330 | PREDICTED: uncharacterized protein LOC10 | 0.897 | 0.903 | 0.366 | 4e-46 | |
| 255571383 | 336 | conserved hypothetical protein [Ricinus | 0.912 | 0.901 | 0.399 | 1e-44 | |
| 388499710 | 333 | unknown [Medicago truncatula] | 0.900 | 0.897 | 0.391 | 6e-43 | |
| 225431629 | 332 | PREDICTED: uncharacterized protein LOC10 | 0.909 | 0.909 | 0.380 | 2e-42 | |
| 225457835 | 332 | PREDICTED: uncharacterized protein LOC10 | 0.849 | 0.849 | 0.354 | 3e-39 | |
| 225457823 | 334 | PREDICTED: uncharacterized protein LOC10 | 0.909 | 0.904 | 0.359 | 1e-37 | |
| 302142741 | 376 | unnamed protein product [Vitis vinifera] | 0.909 | 0.803 | 0.363 | 1e-37 | |
| 224085053 | 331 | predicted protein [Populus trichocarpa] | 0.870 | 0.873 | 0.344 | 5e-37 |
| >gi|224093419|ref|XP_002309917.1| predicted protein [Populus trichocarpa] gi|222852820|gb|EEE90367.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/313 (40%), Positives = 193/313 (61%), Gaps = 12/313 (3%)
Query: 1 MEERHQELKRLGFFGILKESFKLIFSHKKLFTQISQSLLIPISIILEVKILTAILFSFNM 60
M+ +EL+ LGFFGI KESFK+I + +K+F++I+ +L++P+S I + + + F +
Sbjct: 1 MDREQEELQFLGFFGIFKESFKIILTWRKIFSKITLALILPLSFIFLAHMQISQMIFFKI 60
Query: 61 FKNRADPEDITVFIIPQFSTLNISYIASFKWVALWLLSEVTYLILLLVLSILSTVTIAYS 120
N+ D D T P+ L S S +W A WL + Y LL+ S+LST + Y+
Sbjct: 61 LDNQ-DTLDFTQSGTPKHDKL--SDTISAEWTAFWLF-KFAYFTFLLIFSLLSTSAVVYT 116
Query: 121 TASIYKTKDTTFKKAAAVVPELWKPVLITFLLVFAVTFVYDYILGPVLGLILRLLFLKRF 180
A IY K TFKK +VVP++WK +++TF+ FAV +Y+ I+ V+ +IL +
Sbjct: 117 IACIYTAKPITFKKIMSVVPKVWKRLMVTFIWSFAVVVLYN-IVSIVVLIILSFTLINHV 175
Query: 181 --AFLKIVIGVILTVLYIVVFVYITLIWHVGTMVSALENDIYGAKAIIKGRNFLKGKMKD 238
A +I+ V+L +LY V +YIT++WH+ +++S LE D YG KA++K R +KGKM
Sbjct: 176 PAAGFRILFLVVLVILYSVGLLYITIVWHLASVISVLE-DFYGIKAMMKSRELIKGKMGI 234
Query: 239 SVAVFVVLLTLAAGVDAAF-ALVVVYGTIRIWAIRIGIGILLVLLKLMMVLIGLVAQTVI 297
+VA+F+V+ G+ F VV+ T+ IRIG+G+L +LL ++L GLV QTV+
Sbjct: 235 AVAIFIVVGICFVGIQFLFETFVVLEWTME---IRIGMGLLCLLLLFKVILFGLVIQTVL 291
Query: 298 YFVCKSYHDENFE 310
YFVCKSYH EN +
Sbjct: 292 YFVCKSYHHENID 304
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224093413|ref|XP_002309916.1| predicted protein [Populus trichocarpa] gi|222852819|gb|EEE90366.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449456675|ref|XP_004146074.1| PREDICTED: uncharacterized protein LOC101219186 [Cucumis sativus] gi|449524022|ref|XP_004169022.1| PREDICTED: uncharacterized protein LOC101229182 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255571383|ref|XP_002526640.1| conserved hypothetical protein [Ricinus communis] gi|223534032|gb|EEF35752.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|388499710|gb|AFK37921.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|225431629|ref|XP_002262838.1| PREDICTED: uncharacterized protein LOC100255146 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225457835|ref|XP_002267135.1| PREDICTED: uncharacterized protein LOC100243726 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225457823|ref|XP_002278755.1| PREDICTED: uncharacterized protein LOC100245483 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|302142741|emb|CBI19944.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224085053|ref|XP_002307472.1| predicted protein [Populus trichocarpa] gi|222856921|gb|EEE94468.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 332 | ||||||
| TAIR|locus:2029529 | 321 | AT1G31130 "AT1G31130" [Arabido | 0.584 | 0.604 | 0.276 | 5.3e-16 | |
| TAIR|locus:2119807 | 321 | AT4G19950 "AT4G19950" [Arabido | 0.572 | 0.591 | 0.243 | 1.8e-09 | |
| TAIR|locus:2155307 | 321 | AT5G44860 "AT5G44860" [Arabido | 0.563 | 0.582 | 0.236 | 4.6e-08 |
| TAIR|locus:2029529 AT1G31130 "AT1G31130" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 201 (75.8 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 55/199 (27%), Positives = 80/199 (40%)
Query: 119 YSTASIYXXXXXXXXXXXXVVPELWKPVLITFLLVFAVTFVYDYXXXXXXXXXXXXXXXX 178
++ AS+Y +P+++K + ITFL V + F Y+
Sbjct: 102 FTVASLYTGKPVSFSSTLSAIPKVFKRLFITFLWVALLMFAYN-AVFFVFLVMLLVALDL 160
Query: 179 XXXXXXXVIGVILTVLYIVVFVYITLIWHVGTMVSALENDIYGAKAIIKGRNFLKGKMKD 238
V GVI++VLY V VY T +WH+G+++S LE +YG A+ K LKGK K
Sbjct: 161 NSLGLAIVAGVIISVLYFGVHVYFTALWHLGSVISVLE-PVYGIAAMRKAYELLKGKTKM 219
Query: 239 SXXXXXXXXXXXXXXDAAFALVVVYGTXXXXXXXXXXXXXXXXXXXXXXXXXXX-AQTVI 297
+ F VVV+G Q+V
Sbjct: 220 AMGLIFVYLFLCGLIGVVFGAVVVHGGGKYGTFTRTLVGGLLVGVLVMVNLVGLLVQSVF 279
Query: 298 YFVCKSYHDENFED--LYD 314
Y+VCKSYH + + LYD
Sbjct: 280 YYVCKSYHHQTIDKTALYD 298
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| TAIR|locus:2119807 AT4G19950 "AT4G19950" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2155307 AT5G44860 "AT5G44860" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00070409 | hypothetical protein (334 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 332 | |||
| PF06161 | 243 | DUF975: Protein of unknown function (DUF975); Inte | 98.95 | |
| PF10110 | 149 | GPDPase_memb: Membrane domain of glycerophosphoryl | 98.86 | |
| PF06790 | 248 | UPF0259: Uncharacterised protein family (UPF0259); | 98.67 | |
| PRK02868 | 245 | hypothetical protein; Provisional | 98.42 | |
| COG4781 | 340 | Membrane domain of membrane-anchored glycerophosph | 94.38 | |
| PF10110 | 149 | GPDPase_memb: Membrane domain of glycerophosphoryl | 90.44 |
| >PF06161 DUF975: Protein of unknown function (DUF975); InterPro: IPR010380 This is a family of uncharacterised bacterial proteins | Back alignment and domain information |
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Probab=98.95 E-value=1.7e-06 Score=79.63 Aligned_cols=170 Identities=11% Similarity=0.158 Sum_probs=93.3
Q ss_pred HHHHHHHHHHhhhcC-CCCChhHHHHhh--hhhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH--hhch-h--H
Q 037643 113 STVTIAYSTASIYKT-KDTTFKKAAAVV--PELWKPVLITFLLVFAVTFVYDYILG-PVLGLILRLLFL--KRFA-F--L 183 (332)
Q Consensus 113 s~aaiv~av~~~y~g-~~~t~~~~l~~~--~~~wk~ll~T~l~~~ll~~~~~~~~~-~~~~l~~~~~~~--~~~~-~--~ 183 (332)
-.....+..-.+..| ++.++++..... ++.+| .+.+.+...+..+....+.. |....+...... +... . .
T Consensus 63 l~~G~~~~~L~~~r~~~~~~~~d~f~~F~~~~f~k-~~~~~ll~~l~~~Lw~ll~~i~~~i~~~~~~~~~~~~~~~~~~~ 141 (243)
T PF06161_consen 63 LSAGYSFFYLDIVRGKEEPSFSDLFYGFKKKRFGK-SFLLYLLISLFIFLWSLLFIIGFFIFFISFFIFLVGSMNSRSSI 141 (243)
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHccccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhH
Confidence 335555666677777 899999999876 44444 56666555555544444322 211111111111 1111 1 0
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhhhheeeeecCCchhhHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 037643 184 --KIVIGVILTVLYIVVFVYITLIWHVGTMVSALENDIYGAKAIIKGRNFLKGKMKDSVAVFVVLLTLAAGVDAAFALVV 261 (332)
Q Consensus 184 --~~~~~~~~~i~~~~~~~y~~vvw~la~VVSVlE~~~~G~~Al~rS~~L~kG~~~~~l~l~l~~~l~~~~i~~~f~~~v 261 (332)
.........++..+.-.|....+.++.-+-.-+||....+|+++|+++|||++|+-+.+-+-+- +|.+=..+
T Consensus 142 ~~~~~~~~~~~l~~~i~~i~~~~~y~~~~yil~d~~~~~~~~al~~S~~lmkg~k~~~f~l~Lsfi------gw~~L~~~ 215 (243)
T PF06161_consen 142 ISLLLLLVLLLLLLIIPGIIVSYSYSMVPYILADNPELGAFEALKRSRKLMKGNKWRLFLLDLSFI------GWYILGLL 215 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCHHHHHHHHHHHHhhHHHHHHHHHHHHH------HHHHHHHH
Confidence 1111111122222333455555555554434445678899999999999999999988766543 22111101
Q ss_pred HhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 037643 262 VYGTIRIWAIRIGIGILLVLLKLMMVLIGLVAQTVIYFVCKSYH 305 (332)
Q Consensus 262 ~~~~~~~~g~~v~~~~~~~~l~~~~~l~~~v~~tV~Y~~CK~~~ 305 (332)
.. ......+.++..++++.||.|.|+++
T Consensus 216 ------------t~----gi~~l~~~pY~~~~~a~fY~~l~~~~ 243 (243)
T PF06161_consen 216 ------------TF----GIGLLWVIPYINTAQAEFYEELRKRK 243 (243)
T ss_pred ------------HH----HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11 11123445999999999999999875
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| >PF10110 GPDPase_memb: Membrane domain of glycerophosphoryl diester phosphodiesterase; InterPro: IPR018476 Members of this family comprise the membrane domain of the prokaryotic enzyme glycerophosphoryl diester phosphodiesterase [] | Back alignment and domain information |
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| >PF06790 UPF0259: Uncharacterised protein family (UPF0259); InterPro: IPR009627 This is a group of proteins of unknown function | Back alignment and domain information |
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| >PRK02868 hypothetical protein; Provisional | Back alignment and domain information |
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| >COG4781 Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase [Energy production and conversion] | Back alignment and domain information |
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| >PF10110 GPDPase_memb: Membrane domain of glycerophosphoryl diester phosphodiesterase; InterPro: IPR018476 Members of this family comprise the membrane domain of the prokaryotic enzyme glycerophosphoryl diester phosphodiesterase [] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00