Citrus Sinensis ID: 037801

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80----
Protein Sequence
SLCPVVFALRNYSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTIEINTRL
Secondary Structure (PSIPRED)
ccccHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHccccccccccccHHHHHHccccHHHHHHHHHEEEccccEEEEcccccHHHHHHHHHHHHHccccccccccccc
Coil and Loop (DISEMBL)
SLCPVVFALRNyssaakqgklasveELEPFVNHASQMAALDYIVSVEsdvfipsysgnmARAVEGHLMLRFSGLSKTIEINTRL
Flexible Loop (DISEMBL)
SLCPVVFALrnyssaakqgKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLrfsglsktieintrl
Low Complexity Region (SEG)
SLCPVVFALRNYSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTIEINTRL
Disordered region (IsUnstruct)
**CPVVFALRNYSSA****KLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKT*******
Disordered Region (DISOPRED)
***PVVFALRNYSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTIEINT**
Disordered Region (DISEMBL)
SLCPVVFALRNYSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTIEINTRL
Disordered Region (DISPRO)
SLCPVVFALRNYSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTIEI****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
SLCPVVFALRNYSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTIEINTRL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
255545806	536	conserved hypothetical protein [Ricinus	0.738	0.115	0.812	1e-20
449469833	534	PREDICTED: DUF246 domain-containing prot	0.738	0.116	0.812	2e-20
225459219	730	PREDICTED: DUF246 domain-containing prot	0.738	0.084	0.781	1e-19
302141996	536	unnamed protein product [Vitis vinifera]	0.678	0.106	0.847	1e-19
147804836	513	hypothetical protein VITISV_036923 [Viti	0.678	0.111	0.847	2e-19
356552922	525	PREDICTED: DUF246 domain-containing prot	0.678	0.108	0.813	7e-19
357489755	552	DUF246 domain-containing protein [Medica	0.666	0.101	0.810	1e-18
224066985	424	predicted protein [Populus trichocarpa]	0.773	0.153	0.671	6e-18
356500719	514	PREDICTED: DUF246 domain-containing prot	0.559	0.091	0.914	8e-18
357465109	545	DUF246 domain-containing protein [Medica	0.678	0.104	0.796	1e-17

>gi|255545806|ref|XP_002513963.1| conserved hypothetical protein [Ricinus communis] gi|223547049|gb|EEF48546.1| conserved hypothetical protein [Ricinus communis]

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/64 (81%), Positives = 55/64 (85%), Gaps = 2/64 (3%)

Query: 20  KLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTIE 79
           KLASVEELEPF+NHASQMAALDYIVSVESDVFIPSYSGNMARAVEGH   RF G  KTI 
Sbjct: 392 KLASVEELEPFINHASQMAALDYIVSVESDVFIPSYSGNMARAVEGH--RRFMGHRKTIS 449

Query: 80  INTR 83
            + +
Sbjct: 450 PDRK 453

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469833|ref|XP_004152623.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] gi|449503909|ref|XP_004162223.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus]

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/64 (81%), Positives = 55/64 (85%), Gaps = 2/64 (3%)

Query: 20  KLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTIE 79
           KLASVEELEPFVNHASQMAALDYIVSVESDVF+PSYSGNMARAVEGH   RF G  KTI 
Sbjct: 392 KLASVEELEPFVNHASQMAALDYIVSVESDVFVPSYSGNMARAVEGH--RRFLGHRKTIS 449

Query: 80  INTR 83
            + +
Sbjct: 450 PDRK 453

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459219|ref|XP_002284058.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis vinifera]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 54/64 (84%), Gaps = 2/64 (3%)

Query: 20  KLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTIE 79
           KLAS++ELEPF NHASQMAALDYIVSVESDVFIPSYSGNMARAVEGH   RF G  KTI 
Sbjct: 393 KLASIDELEPFANHASQMAALDYIVSVESDVFIPSYSGNMARAVEGH--RRFLGHRKTIS 450

Query: 80  INTR 83
            + +
Sbjct: 451 PDRK 454

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302141996|emb|CBI19199.3| unnamed protein product [Vitis vinifera]

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 52/59 (88%), Gaps = 2/59 (3%)

Query: 20  KLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTI 78
           KLAS++ELEPF NHASQMAALDYIVSVESDVFIPSYSGNMARAVEGH   RF G  KTI
Sbjct: 393 KLASIDELEPFANHASQMAALDYIVSVESDVFIPSYSGNMARAVEGH--RRFLGHRKTI 449

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147804836|emb|CAN71444.1| hypothetical protein VITISV_036923 [Vitis vinifera]

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 52/59 (88%), Gaps = 2/59 (3%)

Query: 20  KLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTI 78
           KLAS++ELEPF NHASQMAALDYIVSVESDVFIPSYSGNMARAVEGH   RF G  KTI
Sbjct: 403 KLASIDELEPFANHASQMAALDYIVSVESDVFIPSYSGNMARAVEGH--RRFLGHRKTI 459

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552922|ref|XP_003544811.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max]

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 48/59 (81%), Positives = 52/59 (88%), Gaps = 2/59 (3%)

Query: 20  KLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTI 78
           KLAS+EELEPF NHASQMAALDYIVS+ESDVFIPSYSGNMA+AVEGH   RF G  +TI
Sbjct: 382 KLASIEELEPFSNHASQMAALDYIVSIESDVFIPSYSGNMAKAVEGH--RRFLGRGRTI 438

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357489755|ref|XP_003615165.1| DUF246 domain-containing protein [Medicago truncatula] gi|355516500|gb|AES98123.1| DUF246 domain-containing protein [Medicago truncatula]

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/58 (81%), Positives = 51/58 (87%), Gaps = 2/58 (3%)

Query: 21  LASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTI 78
           LAS+EELEPF NHASQMAALDYIVS+ESDVFIPSYSGNMARAVEGH   RF G  ++I
Sbjct: 411 LASIEELEPFFNHASQMAALDYIVSIESDVFIPSYSGNMARAVEGH--RRFLGRGRSI 466

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066985|ref|XP_002302312.1| predicted protein [Populus trichocarpa] gi|222844038|gb|EEE81585.1| predicted protein [Populus trichocarpa]

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 2/67 (2%)

Query: 12  YSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRF 71
           Y     + KLAS+EELEPF NH++Q+AALDYI+SVESDVF+P+YSGNMARAVEGH   RF
Sbjct: 288 YPMLMSKEKLASIEELEPFANHSTQLAALDYILSVESDVFMPTYSGNMARAVEGH--RRF 345

Query: 72  SGLSKTI 78
            G  +TI
Sbjct: 346 LGHRRTI 352

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500719|ref|XP_003519179.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max]

 Score = 94.4 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/47 (91%), Positives = 46/47 (97%)

Query: 20  KLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGH 66
           KLAS+EELEPF NHASQMAALDYIVS+ESDVFIPSYSGNMA+AVEGH
Sbjct: 382 KLASIEELEPFSNHASQMAALDYIVSIESDVFIPSYSGNMAKAVEGH 428

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357465109|ref|XP_003602836.1| DUF246 domain-containing protein [Medicago truncatula] gi|355491884|gb|AES73087.1| DUF246 domain-containing protein [Medicago truncatula]

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/59 (79%), Positives = 50/59 (84%), Gaps = 2/59 (3%)

Query: 20  KLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTI 78
           KLAS+EELEPF NHASQMAALDYIVSVESDVF+ SY GNMARAVEGH   RF G  +TI
Sbjct: 409 KLASIEELEPFSNHASQMAALDYIVSVESDVFVHSYPGNMARAVEGH--RRFLGRGRTI 465

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
TAIR|locus:2009467	565	AT1G22460 [Arabidopsis thalian	0.809	0.120	0.676	4.7e-17
TAIR|locus:2076552	512	AT3G02250 [Arabidopsis thalian	0.845	0.138	0.493	1.1e-13
TAIR|locus:2174754	522	AT5G64600 [Arabidopsis thalian	0.666	0.107	0.672	1.9e-13
TAIR|locus:2143181	508	AT5G15740 [Arabidopsis thalian	0.833	0.137	0.486	1e-12
TAIR|locus:2065563	638	AT2G37980 [Arabidopsis thalian	0.773	0.101	0.537	2.5e-12
TAIR|locus:2056981	508	AT2G03280 [Arabidopsis thalian	0.845	0.139	0.493	4.6e-12
TAIR|locus:2080285	638	AT3G54100 [Arabidopsis thalian	0.773	0.101	0.507	6.8e-12
TAIR|locus:2014869	499	AT1G14020 [Arabidopsis thalian	0.773	0.130	0.522	9.4e-12
TAIR|locus:2157096	652	AT5G35570 [Arabidopsis thalian	0.666	0.085	0.551	8.3e-11
TAIR|locus:2167311	559	AT5G63390 [Arabidopsis thalian	0.857	0.128	0.445	1.6e-09

TAIR|locus:2009467 AT1G22460 [Arabidopsis thaliana (taxid:3702)]

 Score = 218 (81.8 bits), Expect = 4.7e-17, P = 4.7e-17
 Identities = 48/71 (67%), Positives = 57/71 (80%)

Query:     9 LRN-YSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHL 67
             LR+ +S    + KLA+ EEL+ F+NH++QMAALDYIVS+ESDVFIPSYSGNMARAVEGH 
Sbjct:   417 LRSRFSMLMSKEKLATREELKTFMNHSTQMAALDYIVSIESDVFIPSYSGNMARAVEGHR 476

Query:    68 MLRFSGLSKTI 78
               RF G  KTI
Sbjct:   477 --RFLGHRKTI 485

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2076552 AT3G02250 [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 36/73 (49%), Positives = 51/73 (69%)

Query:    12 YSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRF 71
             + +  ++  L    +L    NH+SQMAALDY++S+ESD+F+P+Y GNMA+ VEGH   RF
Sbjct:   371 FPNVVRKETLLDSSDLSFCKNHSSQMAALDYLISLESDIFVPTYYGNMAKVVEGHR--RF 428

Query:    72 SGLSKTIEINTRL 84
              G  KTIE+N +L
Sbjct:   429 LGFKKTIELNRKL 441

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2174754 AT5G64600 [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 1.9e-13, P = 1.9e-13
 Identities = 39/58 (67%), Positives = 46/58 (79%)

Query:    21 LASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTI 78
             LA  EEL+ F  HA++ AALDYI+SVESDVF+PS+SGNMARAVEGH   RF G  +TI
Sbjct:   387 LAGNEELKGFTGHATKTAALDYIISVESDVFVPSHSGNMARAVEGHR--RFLGHRRTI 442

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2143181 AT5G15740 [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 1.0e-12, P = 1.0e-12
 Identities = 35/72 (48%), Positives = 50/72 (69%)

Query:    12 YSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRF 71
             + +  ++  L    +L+   NH+SQMAALDY+V++ESD+F+P+  GNMAR VEGH   RF
Sbjct:   371 FPNVVRKETLLESSDLDFCRNHSSQMAALDYLVALESDIFVPTNDGNMARVVEGHR--RF 428

Query:    72 SGLSKTIEINTR 83
              G  KTI++N R
Sbjct:   429 LGFKKTIQLNRR 440

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2065563 AT2G37980 [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.5e-12, P = 2.5e-12
 Identities = 36/67 (53%), Positives = 48/67 (71%)

Query:    12 YSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRF 71
             Y +      LA+ EELEPF  + +++AALDYIV++ESDVF+ +Y GNMA+AV+GH   RF
Sbjct:   487 YPNVFAHSYLATEEELEPFKPYQNRLAALDYIVALESDVFVYTYDGNMAKAVQGHR--RF 544

Query:    72 SGLSKTI 78
              G  KTI
Sbjct:   545 EGFKKTI 551

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2056981 AT2G03280 [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 4.6e-12, P = 4.6e-12
 Identities = 36/73 (49%), Positives = 49/73 (67%)

Query:    11 NYSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLR 70
             ++    K+  L    EL+ F NH+SQMAALD+IVSV S+ FIP+Y GNMA+ VEGH   R
Sbjct:   378 SFPRIVKKEMLLDPTELQQFQNHSSQMAALDFIVSVASNTFIPTYYGNMAKVVEGHR--R 435

Query:    71 FSGLSKTIEINTR 83
             + G  KTI ++ +
Sbjct:   436 YLGFKKTILLDRK 448

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010050 "vegetative phase change" evidence=RCA

GO:0010267 "production of ta-siRNAs involved in RNA interference" evidence=RCA

GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2080285 AT3G54100 [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 6.8e-12, P = 6.8e-12
 Identities = 34/67 (50%), Positives = 48/67 (71%)

Query:    12 YSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRF 71
             Y +      LA+ EELEPF  + +++AALDYIV++ESDVF+ +Y GNMA+AV+GH   +F
Sbjct:   483 YPNVFSHSTLATEEELEPFSQYQNRLAALDYIVALESDVFVYTYDGNMAKAVQGHR--KF 540

Query:    72 SGLSKTI 78
              G  K+I
Sbjct:   541 EGFRKSI 547

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2014869 AT1G14020 [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 9.4e-12, P = 9.4e-12
 Identities = 35/67 (52%), Positives = 47/67 (70%)

Query:    17 KQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSK 76
             K+  L    EL+ F NH+SQMAALD++VSV S+ FIP+Y GNMA+ VEGH   R+ G  K
Sbjct:   360 KKEMLLESAELQQFQNHSSQMAALDFMVSVASNTFIPTYDGNMAKVVEGHR--RYLGYKK 417

Query:    77 TIEINTR 83
             TI ++ +
Sbjct:   418 TILLDRK 424

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2157096 AT5G35570 [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 8.3e-11, P = 8.3e-11
 Identities = 32/58 (55%), Positives = 43/58 (74%)

Query:    21 LASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKTI 78
             LA+ EEL PF NH + +A LDYIV+++S+VF+ +Y GNMA+AV+GH   RF    KTI
Sbjct:   521 LATKEELSPFNNHQNMLAGLDYIVALQSEVFLYTYDGNMAKAVQGHR--RFEDFKKTI 576

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2167311 AT5G63390 [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 33/74 (44%), Positives = 48/74 (64%)

Query:    10 RNYSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLML 69
             + +S+   +  LA   EL P+ N +S +AA+DYIVS+ SDVFIPS+ GNMA+A++G+   
Sbjct:   425 KEFSNLVTKETLAHKGELLPYTNRSSALAAIDYIVSLSSDVFIPSHGGNMAKAMQGNRA- 483

Query:    70 RFSGLSKTIEINTR 83
              + G  K I  N R
Sbjct:   484 -YVGHRKFIMPNKR 496

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	84
cd11299	290	cd11299, O-FucT_plant, GDP-fucose protein O-fucosy	9e-23
pfam10250	315	pfam10250, O-FucT, GDP-fucose protein O-fucosyltra	6e-13

>gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily

 Score = 87.6 bits (218), Expect = 9e-23
 Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 2/57 (3%)

Query: 21  LASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLSKT 77
           LA+ EEL PF  H+S++AALDYIV +ESDVF+P+Y GN A+AV GH   R+ G  KT
Sbjct: 236 LATAEELAPFSGHSSRLAALDYIVCLESDVFVPTYGGNFAKAVAGH--RRYLGHRKT 290

Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290

>gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase

 Score = 61.5 bits (150), Expect = 6e-13
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 20  KLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGH 66
            LAS EEL PF      +AALDYI+ + +DVFI +     +  V+  
Sbjct: 261 SLASKEELAPFKG--GGLAALDYIICLHADVFIGTCGSTFSAFVKRE 305

This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats. Six highly conserved cysteines are present in O-FucT-1 as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and C. elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese. Length = 315

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	84
PF10250	351	O-FucT: GDP-fucose protein O-fucosyltransferase; I	99.37

>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats

Probab=99.37  E-value=1.7e-13  Score=102.41  Aligned_cols=67  Identities=24%  Similarity=0.366  Sum_probs=47.6

Q ss_pred             hhhHHHhcccceeccCCCCcccccccccchhhHhHhhhhhhcccceeeecCCCcHHHHHhhhchhhhcccc
Q 037801            5 VVFALRNYSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLS   75 (84)
Q Consensus         5 ~~~L~~~FPn~~tKe~L~~~~EL~~f~~~~s~~aAlDy~V~~~SDvFv~t~~GNm~~~v~GhR~~~y~G~~   75 (84)
                      |.+|++.||++++|+.+.+.+|++++.+  +++|+||++||++||+||.|...+|...|+++|  .+.|+.
T Consensus       279 l~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~vD~~i~~~s~~Figt~~Stfs~~i~~~R--~~~g~~  345 (351)
T PF10250_consen  279 LDPLKNMFPNVVTKDDLLSHEELEPLND--DQLAMVDQEICSRSDVFIGTCGSTFSSNIARER--HYRGKP  345 (351)
T ss_dssp             ----HHHHHHHHGGGT--EE--S-------S--HHHHHHHHHHSSEEEE-TT-HHHHHHHHHH--HHSSSS
T ss_pred             HHHHHHHhhhhEeccccCCHHHhhhccc--cchhHHHHHHHhcCCEEEecCcchhHHHhhccc--CcCCCC
Confidence            5899999999999999999999999966  999999999999999999999556999999999  888864

Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	84
4ap5_A	408	GDP-fucose protein O-fucosyltransferase 2; GT-B, G	95.49
3zy2_A	362	Putative GDP-fucose protein O-fucosyltransferase;	89.08

>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A*

Probab=95.49  E-value=0.0099  Score=45.22  Aligned_cols=64  Identities=16%  Similarity=0.191  Sum_probs=49.8

Q ss_pred             hhHHHhcccceeccCCCCcccccccccchhhHhHhhhhhhcccceeeecCCCcHHHHHhhhchhhhcccc
Q 037801            6 VFALRNYSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSGLS   75 (84)
Q Consensus         6 ~~L~~~FPn~~tKe~L~~~~EL~~f~~~~s~~aAlDy~V~~~SDvFv~t~~GNm~~~v~GhR~~~y~G~~   75 (84)
                      .-|++.+|.++.-..  ..+++..+  .....|.||-.||..||+||.|..=.|...|.=.|  ...|+.
T Consensus       319 ~~l~~~~~~~~~~~~--~~~~~~~~--~d~~~a~idq~Ic~~a~~FiGt~~StfS~~I~~eR--~~~G~~  382 (408)
T 4ap5_A          319 EELKKLLPEMVRFEP--TWEELELY--KDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEER--EILGLD  382 (408)
T ss_dssp             HHHHHHCTTEECCCC--CHHHHHHH--HHHHHHHHHHHHHHTEEEEEBCTTCHHHHHHHHHH--HHHTBC
T ss_pred             HHHHHhCCCcEEecC--cchhhhcc--CcchhhHHHHHHHHhCCeeEeCCcCchhHHHHHHH--HhcCCC
Confidence            457778887664332  34444544  34567899999999999999999999999999999  999985

>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A*

Probab=89.08  E-value=0.31  Score=38.35  Aligned_cols=35  Identities=11%  Similarity=0.186  Sum_probs=32.4

Q ss_pred             HhHhhhhhhcccceeeecCCCcHHHHHhhhchhhhcc
Q 037801           37 MAALDYIVSVESDVFIPSYSGNMARAVEGHLMLRFSG   73 (84)
Q Consensus        37 ~aAlDy~V~~~SDvFv~t~~GNm~~~v~GhR~~~y~G   73 (84)
                      .|+||-+||.+||+||.|..-.|...|.=.|  --.|
T Consensus       314 ~a~ID~~I~~~A~~FIGN~~SSFSa~I~rER--di~G  348 (362)
T 3zy2_A          314 DMYTSLAIMGRADLFVGNCVSTFSHIVKRER--DHAG  348 (362)
T ss_dssp             CHHHHHHHHHHSSEEEECTTCHHHHHHHHHH--HHSS
T ss_pred             hhHHHHHHHHhCCEeecCccccccHHHHHHH--HhcC
Confidence            7999999999999999999889999999888  7777

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00