Citrus Sinensis ID: 037968

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-----
Protein Sequence
MGYGFHNFLYTIAFAAVVFVSCLHQYSDAAKVHDGDDQQLSDVSLGNSKVGGCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRYKKHLDLI
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEccccccccccccccccccHHHHHcccccccccccEEEcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEcccEEcccccccccccccccccccccccHccccccHHcEEEEcccccccccccHHHHcc
Coil and Loop (DISEMBL)
MGYGFHNFLYTIAFAAVVFVSCLHqysdaakvhdgddqqlsdvslgnskvggcdffqgswvrddayplydtsicpfiEREFdclkngrpdklylkykwkptacelprykkhldli
Flexible Loop (DISEMBL)
MGYGFHNFLYTIAFAAVVFVSCLHQYSDAAKVHDGDDQQLSDVSLGNSKVGGCDFFQGSWVRDDAYPLYDTSICPFIErefdclkngrpdklylkykwkptacelprykkhldli
Low Complexity Region (SEG)
MGYGFHNFLYTIAFAAVVFVSCLHQYSDAAKVHDGDDQQLSDVSLGNSKVGGCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRYKKHLDLI
Disordered region (IsUnstruct)
**YGFHNFLYTIAFAAVVFVSCLHQYSDAAKVH********DVSLGNSKVGGCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRYK******
Disordered Region (DISOPRED)
***GFHNFLYTIAFAAVVFVSCLH*****************************DFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRYKKHLDLI
Disordered Region (DISEMBL)
MGYGFHNFLYTIAFAAVVFVSCLHQYSDAAKVHDGDDQQLSDVSLGNSKVGGCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRYKKHLDLI
Disordered Region (DISPRO)
*GYGFHNFLYTIAFAAVVFVSCLHQYS***********************GGCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRYKKHLDLI
Transmembrane Helix (TMHMM)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGYGFHNFLYTIAFAAVVFVSCLHQYSDAAKVHDGDDQQLSDVSLGNSKVGGCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRYKKHLDLI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
224116972	366	predicted protein [Populus trichocarpa]	0.860	0.270	0.590	4e-30
225461784	365	PREDICTED: uncharacterized protein LOC10	0.860	0.271	0.522	1e-25
147853623	365	hypothetical protein VITISV_007322 [Viti	0.860	0.271	0.522	1e-25
359485318	353	PREDICTED: uncharacterized protein LOC10	0.495	0.161	0.719	8e-21
302143483	741	unnamed protein product [Vitis vinifera]	0.426	0.066	0.719	8e-21
388523085	367	unknown [Lotus japonicus]	0.808	0.253	0.494	2e-20
356566157	426	PREDICTED: uncharacterized protein LOC10	0.808	0.218	0.48	2e-20
357459321	351	hypothetical protein MTR_3g049330 [Medic	0.730	0.239	0.510	2e-20
356567743	361	PREDICTED: uncharacterized protein LOC10	0.808	0.257	0.48	3e-20
302142823	1354	unnamed protein product [Vitis vinifera]	0.495	0.042	0.719	4e-20

>gi|224116972|ref|XP_002317442.1| predicted protein [Populus trichocarpa] gi|222860507|gb|EEE98054.1| predicted protein [Populus trichocarpa]

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/110 (59%), Positives = 80/110 (72%), Gaps = 11/110 (10%)

Query: 1   MGYGFHNFLYTIAFA-AVVFVSCLHQYSDAAKVHDGDDQQLSDVSLGNSKVGGCDFFQGS 59
           M  GF +F   + FA  ++ +SCL Q S+A  ++D         +LG SK+GGCDFFQGS
Sbjct: 1   MENGFRSFCSLLTFALGLLIISCLRQ-SNATLLYD---------NLGGSKLGGCDFFQGS 50

Query: 60  WVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRYK 109
           WV DDAYPLY+TS CPFIE+EFDC  NGRPDKLYL+Y+WKP ACELPR+ 
Sbjct: 51  WVEDDAYPLYNTSACPFIEKEFDCQGNGRPDKLYLQYRWKPVACELPRFN 100

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461784|ref|XP_002285609.1| PREDICTED: uncharacterized protein LOC100253718 [Vitis vinifera] gi|302142824|emb|CBI20119.3| unnamed protein product [Vitis vinifera]

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 76/109 (69%), Gaps = 10/109 (9%)

Query: 1   MGYGFHNFLYTIAFAAVVFVSCLHQYSDAAKVHDGDDQQLSDVSLGNSKVGGCDFFQGSW 60
           MGYGF  FL    FAA+  VS LH+ +  AKV      +++      +++ GC+ +QGSW
Sbjct: 1   MGYGFGGFL--CFFAAIFLVSWLHESN--AKVEGSSSDEVA------AQLAGCNLYQGSW 50

Query: 61  VRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRYK 109
           V DD +PLY +SICPFI++EFDC KNGRPDKLYLKY+W+P+ C LPR+ 
Sbjct: 51  VIDDTFPLYQSSICPFIDKEFDCQKNGRPDKLYLKYRWRPSGCILPRFN 99

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147853623|emb|CAN82331.1| hypothetical protein VITISV_007322 [Vitis vinifera]

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 76/109 (69%), Gaps = 10/109 (9%)

Query: 1   MGYGFHNFLYTIAFAAVVFVSCLHQYSDAAKVHDGDDQQLSDVSLGNSKVGGCDFFQGSW 60
           MGYGF  FL    FAA+  VS LH+ +  AKV      +++      +++ GC+ +QGSW
Sbjct: 1   MGYGFGGFL--CFFAAIFLVSWLHESN--AKVEGSSSDEVA------AQLAGCNLYQGSW 50

Query: 61  VRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRYK 109
           V DD +PLY +SICPFI++EFDC KNGRPDKLYLKY+W+P+ C LPR+ 
Sbjct: 51  VIDDTFPLYQSSICPFIDKEFDCQKNGRPDKLYLKYRWRPSGCILPRFN 99

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485318|ref|XP_002278078.2| PREDICTED: uncharacterized protein LOC100267770 [Vitis vinifera]

 Score =  104 bits (259), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 50/57 (87%)

Query: 52  GCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRY 108
           GCD F+GSWV D +YPLYDT+ CPFIE+EFDC KNGRPDK YL Y+W+P+AC+LPR+
Sbjct: 29  GCDLFEGSWVNDTSYPLYDTNECPFIEKEFDCQKNGRPDKFYLHYRWQPSACKLPRF 85

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143483|emb|CBI22044.3| unnamed protein product [Vitis vinifera]

 Score =  104 bits (259), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 50/57 (87%)

Query: 52  GCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRY 108
           GCD F+GSWV D +YPLYDT+ CPFIE+EFDC KNGRPDK YL Y+W+P+AC+LPR+
Sbjct: 29  GCDLFEGSWVNDTSYPLYDTNECPFIEKEFDCQKNGRPDKFYLHYRWQPSACKLPRF 85

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388523085|gb|AFK49604.1| unknown [Lotus japonicus]

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/97 (49%), Positives = 64/97 (65%), Gaps = 4/97 (4%)

Query: 13  AFAAVVFVSCLHQYSDAAKVHDGDDQQLSDVSLGNSKVGGCDFFQGSWVRDDAYPLYDTS 72
             +AV+F++ L Q       HD + Q+      G S   GCD F+G WV D++YPLYD+S
Sbjct: 8   TISAVLFLALLIQIH-GKDDHDVNYQKQLTAGFGKS---GCDLFEGRWVYDESYPLYDSS 63

Query: 73  ICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRYK 109
            CPF E++FDC KNGRPDK +LKY+W+PT C LPR+ 
Sbjct: 64  RCPFFEQQFDCQKNGRPDKFHLKYRWQPTGCNLPRFN 100

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566157|ref|XP_003551301.1| PREDICTED: uncharacterized protein LOC100785226 [Glycine max]

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 67/100 (67%), Gaps = 7/100 (7%)

Query: 10  YTIAFAAVVFVSCLHQYSDAAKVHDGDDQQLSDVSLGNSKVGGCDFFQGSWVRDDAYPLY 69
           ++ + + V+F++ L Q   +  +   D +Q    + G ++  GC+ FQGSWV DD+YPLY
Sbjct: 68  WSFSISVVLFLTLLIQIHGSGYL---DHKQ----ARGFAENYGCNLFQGSWVYDDSYPLY 120

Query: 70  DTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRYK 109
           +TS CPFIEREFDC  NGRPDK YLKY+W+P  C L R+ 
Sbjct: 121 ETSQCPFIEREFDCQNNGRPDKFYLKYRWQPAGCNLTRFN 160

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357459321|ref|XP_003599941.1| hypothetical protein MTR_3g049330 [Medicago truncatula] gi|355488989|gb|AES70192.1| hypothetical protein MTR_3g049330 [Medicago truncatula]

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 64/94 (68%), Gaps = 10/94 (10%)

Query: 15  AAVVFVSCLHQYSDAAKVHDGDDQQLSDVSLGNSKVGGCDFFQGSWVRDDAYPLYDTSIC 74
           + ++FVS +H       +H      +   ++G +K  GCD FQG WV D++YPLY TS C
Sbjct: 3   SIIIFVSLIHVL---LMIH------VHGKTIGFAK-SGCDLFQGKWVYDESYPLYQTSQC 52

Query: 75  PFIEREFDCLKNGRPDKLYLKYKWKPTACELPRY 108
           PFIE+EFDC  NGRPDK YLKY+W+PT C+LPR+
Sbjct: 53  PFIEKEFDCQNNGRPDKFYLKYRWQPTKCDLPRF 86

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567743|ref|XP_003552076.1| PREDICTED: uncharacterized protein LOC100810342 [Glycine max]

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 67/100 (67%), Gaps = 7/100 (7%)

Query: 10  YTIAFAAVVFVSCLHQYSDAAKVHDGDDQQLSDVSLGNSKVGGCDFFQGSWVRDDAYPLY 69
           ++ + + V+F++ L Q   +  +   D +Q    + G ++  GC+ FQGSWV DD+YPLY
Sbjct: 3   WSFSISVVLFLTLLIQIHGSGYL---DHKQ----ARGFAENYGCNLFQGSWVYDDSYPLY 55

Query: 70  DTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRYK 109
           +TS CPFIEREFDC  NGRPDK YLKY+W+P  C L R+ 
Sbjct: 56  ETSQCPFIEREFDCQNNGRPDKFYLKYRWQPAGCNLTRFN 95

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142823|emb|CBI20118.3| unnamed protein product [Vitis vinifera]

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 48/57 (84%)

Query: 52  GCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRY 108
           GCDFF+G+WV DD+YPLYD+SICPFI    DC KNGRPDKLYLKY+W+P  C LPR+
Sbjct: 42  GCDFFKGTWVVDDSYPLYDSSICPFISPHVDCQKNGRPDKLYLKYRWQPHGCTLPRF 98

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
TAIR|locus:2055425	385	TBL37 "AT2G34070" [Arabidopsis	0.547	0.163	0.587	2.4e-19
TAIR|locus:2029959	380	TBL38 "AT1G29050" [Arabidopsis	0.521	0.157	0.6	1.1e-18
TAIR|locus:2041574	367	TBL39 "AT2G42570" [Arabidopsis	0.504	0.158	0.568	7.7e-17
TAIR|locus:2099402	356	TBL41 "TRICHOME BIREFRINGENCE-	0.495	0.160	0.561	8.8e-17
TAIR|locus:2149947	485	TBL5 "AT5G20590" [Arabidopsis	0.521	0.123	0.524	6.7e-16
TAIR|locus:2028533	445	TBL7 "AT1G48880" [Arabidopsis	0.547	0.141	0.545	9e-16
TAIR|locus:2182157	464	TBL11 "TRICHOME BIREFRINGENCE-	0.730	0.181	0.414	3.5e-15
TAIR|locus:2155874	457	TBL4 "AT5G49340" [Arabidopsis	0.582	0.146	0.449	4.3e-15
TAIR|locus:2170184	608	TBR [Arabidopsis thaliana (tax	0.573	0.108	0.454	6.1e-15
TAIR|locus:2088659	556	TBL1 "AT3G12060" [Arabidopsis	0.547	0.113	0.507	8.5e-15

TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 2.4e-19, P = 2.4e-19
 Identities = 37/63 (58%), Positives = 47/63 (74%)

Query:    46 GNSKVGGCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACEL 105
             G  +  GC+ FQG WV D +YP YD+S CPFI+ EFDCLK GRPDK +LKY W+P +C +
Sbjct:    58 GRKQTSGCNLFQGRWVFDASYPFYDSSTCPFIDGEFDCLKFGRPDKQFLKYSWQPDSCTV 117

Query:   106 PRY 108
             PR+
Sbjct:   118 PRF 120

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 36/60 (60%), Positives = 46/60 (76%)

Query:    49 KVGGCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRY 108
             +  GC+ FQG WV D +YP YD+S CPFI+ EFDCLK GRPDK +LKY W+P +C +PR+
Sbjct:    57 RASGCNLFQGRWVFDASYPFYDSSKCPFIDGEFDCLKFGRPDKQFLKYSWQPESCTIPRF 116

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 7.7e-17, P = 7.7e-17
 Identities = 33/58 (56%), Positives = 45/58 (77%)

Query:    51 GGCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRY 108
             G C++F+G+WV D  YPLYD   CPFI+ +F+C K GRPD  YLKY+W+P++C LPR+
Sbjct:    45 GRCNWFRGNWVYDVKYPLYDPYKCPFIDPQFNCKKYGRPDNAYLKYRWQPSSCSLPRF 102

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 8.8e-17, P = 8.8e-17
 Identities = 32/57 (56%), Positives = 43/57 (75%)

Query:    52 GCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRY 108
             GCD F G WV+DD+YPLY++S CPFI  EF C +NGRPD  Y  ++W+P +C+L R+
Sbjct:    33 GCDMFTGRWVKDDSYPLYNSSTCPFIRHEFSCQRNGRPDLDYSTFRWQPLSCKLARF 89

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2149947 TBL5 "AT5G20590" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 6.7e-16, P = 6.7e-16
 Identities = 32/61 (52%), Positives = 44/61 (72%)

Query:    49 KVGGCDFFQGSWVR-DDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPR 107
             K+ GCD ++GSWV+ DD YPLY    CP+++  FDC +NGR D  YL ++WKP  C+LPR
Sbjct:   137 KMRGCDLYKGSWVKGDDEYPLYQPGSCPYVDDAFDCQRNGRRDSDYLNWRWKPDGCDLPR 196

Query:   108 Y 108
             +
Sbjct:   197 F 197

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2028533 TBL7 "AT1G48880" [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 9.0e-16, P = 9.0e-16
 Identities = 36/66 (54%), Positives = 46/66 (69%)

Query:    47 NSKVGG---CDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTAC 103
             NS V G   CD F G+WV DD YPLY+ S CPF+E+ F+CL NGR    YLK++WKP  C
Sbjct:   106 NSSVVGDTECDIFDGNWVVDDNYPLYNASECPFVEKGFNCLGNGRGHDEYLKWRWKPKHC 165

Query:   104 ELPRYK 109
              +PR++
Sbjct:   166 TVPRFE 171

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2182157 TBL11 "TRICHOME BIREFRINGENCE-LIKE 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 3.5e-15, P = 3.5e-15
 Identities = 41/99 (41%), Positives = 54/99 (54%)

Query:    31 KVHDGDDQ--------QLSDVSLGNSKVG-------GCDFFQGSWVRDDAYPLYDTSICP 75
             K HD  DQ        +L    + N+KVG       GCD F G WV D++YPLY +  C 
Sbjct:    62 KSHDFSDQSERFLWLKELDGFEVNNTKVGFLEESGNGCDLFNGKWVWDESYPLYQSKDCT 121

Query:    76 FIEREFDCLKNGRPDKLYLKYKWKPTACELPRYKKHLDL 114
             FI+  F C + GRPD  Y K++W+P  C+LPR+   L L
Sbjct:   122 FIDEGFRCTEFGRPDLFYTKWRWQPNHCDLPRFDAKLML 160

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2155874 TBL4 "AT5G49340" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 4.3e-15, P = 4.3e-15
 Identities = 31/69 (44%), Positives = 48/69 (69%)

Query:    49 KVGGCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRY 108
             ++  CD F G+WV DD+ P+Y    CPF+E +F+C KNGRPD  +L+++W+P  C +PR+
Sbjct:    96 ELASCDIFDGTWVFDDSEPVYLPGYCPFVEDKFNCFKNGRPDSGFLRHRWQPHGCSIPRF 155

Query:   109 --KKHLDLI 115
               KK L ++
Sbjct:   156 DGKKMLKML 164

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 6.1e-15, P = 6.1e-15
 Identities = 30/66 (45%), Positives = 43/66 (65%)

Query:    42 DVSLGNSKVGGCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPT 101
             ++   +  +  C+FF G W++DD+YPLY    C  I+ +F+C+ NGRPDK + K KWKP 
Sbjct:   244 EIEKWSESLKNCEFFDGEWIKDDSYPLYKPGSCNLIDEQFNCITNGRPDKDFQKLKWKPK 303

Query:   102 ACELPR 107
              C LPR
Sbjct:   304 KCSLPR 309

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0030244 "cellulose biosynthetic process" evidence=IMP

GO:0009827 "plant-type cell wall modification" evidence=IMP

GO:0045489 "pectin biosynthetic process" evidence=IMP

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 8.5e-15, P = 8.5e-15
 Identities = 33/65 (50%), Positives = 44/65 (67%)

Query:    53 CDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACELPRYK--K 110
             C+FF+G WV+DD+YPLY    C  I+ +F+C+ NGRPD  + K KWKP  C LPR    K
Sbjct:   196 CEFFEGDWVKDDSYPLYKPGSCNLIDEQFNCISNGRPDVDFQKLKWKPKQCSLPRLNGGK 255

Query:   111 HLDLI 115
              L++I
Sbjct:   256 LLEMI 260

GO:0030244 "cellulose biosynthetic process" evidence=IMP

GO:0007129 "synapsis" evidence=RCA

GO:0007131 "reciprocal meiotic recombination" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00027905001 SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (365 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	115
pfam14416	55	pfam14416, PMR5N, PMR5 N terminal Domain	2e-26
PLN02629	387	PLN02629, PLN02629, powdery mildew resistance 5	6e-23

>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain

 Score = 92.7 bits (231), Expect = 2e-26
 Identities = 30/54 (55%), Positives = 38/54 (70%)

Query: 51  GGCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACE 104
             CD F+G WV D +YPLY  S CPFI+  F+C KNGRPD  YLK++W+P  C+
Sbjct: 2   EECDLFKGKWVFDPSYPLYTNSSCPFIDPGFNCQKNGRPDSDYLKWRWQPHGCD 55

The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich predicted sugar binding domain followed by the PC-Esterase (acyl esterase) domain. Length = 55

>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5

 Score = 90.7 bits (225), Expect = 6e-23
 Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 1/57 (1%)

Query: 53  CDFFQGSWVRDDAYPLYDTSICP-FIEREFDCLKNGRPDKLYLKYKWKPTACELPRY 108
           C  F G+WVRDD+YPLY +S CP  I+ EF+C   GRPD  YLKY+W+P  CELPR+
Sbjct: 53  CALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRF 109

Length = 387

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	115
PLN02629	387	powdery mildew resistance 5	100.0
PF14416	55	PMR5N: PMR5 N terminal Domain	99.98

>PLN02629 powdery mildew resistance 5

Probab=100.00  E-value=3.1e-34  Score=241.57  Aligned_cols=67  Identities=52%  Similarity=1.143  Sum_probs=64.4

Q ss_pred             CCCCCccceeccEEeCCCCCCcCCCCCC-CcccccchhhcCCCCCCCceeeeecCCCCCCCCCcccCC
Q 037968           48 SKVGGCDFFQGSWVRDDAYPLYDTSICP-FIEREFDCLKNGRPDKLYLKYKWKPTACELPRYKKHLDL  114 (115)
Q Consensus        48 ~~~~~CD~~~G~WV~D~s~PlY~~~~Cp-fi~~~~nC~~nGRpD~~yl~wRWqP~~C~LPrFd~~~fL  114 (115)
                      .+.+.||+|+|+||+|+++|+|++++|| ||+++|||++|||||++|++|||||++|+||||||..||
T Consensus        48 ~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fL  115 (387)
T PLN02629         48 ANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFL  115 (387)
T ss_pred             CCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHH
Confidence            4456899999999999999999999999 999999999999999999999999999999999999997

>PF14416 PMR5N: PMR5 N terminal Domain

Probab=99.98  E-value=2.2e-33  Score=181.79  Aligned_cols=54  Identities=56%  Similarity=1.371  Sum_probs=52.6

Q ss_pred             CCccceeccEEeCCCCCCcCCCCCCCcccccchhhcCCCCCCCceeeeecCCCC
Q 037968           51 GGCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACE  104 (115)
Q Consensus        51 ~~CD~~~G~WV~D~s~PlY~~~~Cpfi~~~~nC~~nGRpD~~yl~wRWqP~~C~  104 (115)
                      +.||+|+|+||+|+++|+|++++||||+++|||++|||||++|++|||||++|+
T Consensus         2 ~~Cd~~~G~WV~D~~~PlY~~~~Cp~i~~~~nC~~nGRpD~~y~~wRWqP~~Cd   55 (55)
T PF14416_consen    2 KRCDYFDGRWVPDPSYPLYTNSTCPFIDEGFNCQKNGRPDSDYLKWRWQPRGCD   55 (55)
T ss_pred             CccCcccCEEEeCCCCCccCCCCCCcCCCccchhhcCCCCCccceeeecCCCCC
Confidence            379999999999999999999999999999999999999999999999999997

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00