Citrus Sinensis ID: 039155

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200------
Protein Sequence
MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFTGRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTIITTCVQQLWDCSTYSWDSYIAYTADWISQKLKR
Secondary Structure (PSIPRED)
cEEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHEEHHHHHHHHHHHHHHHHHHHHcccHHEEEHHHcHHHHHHHHHHHHccccccEEEEEEHHHHcHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MAGVAMTTIgktwtadepqssisknrkhyLVGDLFALLSAMTYGLFTGRRKLDMQKLVGCIGLFTLVALWWLVWpltamgiepkfafphsakTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIhhqhyspiyiigsvqnssqnrwIDIAEFKTIITTCVQQlwdcstyswdSYIAYTADWISQKLKR
Flexible Loop (DISEMBL)
MAGVAMttigktwtadepqssisknRKHYLVGDLFALLSAMTYGLFTGRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTIITTCVQQLWDCSTYSWDSYIAYTADWISQKLKR
Low Complexity Region (SEG)
MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFTGRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTIITTCVQQLWDCSTYSWDSYIAYTADWISQKLKR
Disordered region (IsUnstruct)
**************************KHYLVGDLFALLSAMTYGLFTGRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTIITTCVQQLWDCSTYSWDSYIAYTADWIS*****
Disordered Region (DISOPRED)
MAGVAMTTIGK******************LVGDLFALLSAMTYGLFTGRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQN***************ITTCVQQLWDCSTYSWDSYIAYTADWISQKL**
Disordered Region (DISEMBL)
MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFTGRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTIITTCVQQLWDCSTYSWDSYIAYTADWISQKLKR
Disordered Region (DISPRO)
MAGVAMTTIGKTW*************KHYLVGDLFALLSAMTYGLFTGRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTIITTCVQQLWDCSTYSWDSYIAYTADWISQKLK*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFTGRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTIITTCVQQLWDCSTYSWDSYIAYTADWISQKLKR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	206	2.2.26 [Sep-21-2011]
Q03730	393	Uncharacterized vacuolar	yes	no	0.601	0.315	0.365	3e-16
Q04083	370	Thiamine-repressible mito	no	no	0.669	0.372	0.324	2e-14
Q4R794	432	Solute carrier family 35	N/A	no	0.655	0.312	0.317	1e-11
Q8WV83	523	Solute carrier family 35	yes	no	0.601	0.237	0.335	1e-11
A6QL92	524	Solute carrier family 35	yes	no	0.655	0.257	0.310	1e-11
Q5R6J3	523	Solute carrier family 35	yes	no	0.601	0.237	0.328	1e-11
Q8R314	524	Solute carrier family 35	yes	no	0.601	0.236	0.328	2e-11
O94654	341	Uncharacterized transport	yes	no	0.466	0.281	0.357	2e-10

>sp|Q03730|YMB8_YEAST Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1 SV=1

 Score = 85.1 bits (209), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 10/134 (7%)

Query: 30  LVGDLFALLSAMTYGLFT--------GRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGI 81
           L+G+L AL  A+ YG+++           +++M+   G +GLF L+ LW  +  L   G 
Sbjct: 224 LIGNLLALAGAVLYGVYSTLLKREVGDETRVNMKIFFGFVGLFNLLFLWPSLIVLDFFGW 283

Query: 82  EPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMF 141
           EP F+ P   K   II  N  +  FVSD+ WA  ++ TSPL   +G+S+TIPLAM  D+ 
Sbjct: 284 EP-FSLPKDPKVVVIIFVNCLI-TFVSDFCWAKAMLLTSPLTVTVGLSITIPLAMFGDVI 341

Query: 142 IHHQHYSPIYIIGS 155
             H+  S +Y+ G+
Sbjct: 342 FKHKTMSALYLFGA 355

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q04083|THI74_YEAST Thiamine-repressible mitochondrial transport protein THI74 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI74 PE=1 SV=1

 Score = 79.3 bits (194), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 13/151 (8%)

Query: 15  ADEPQSSISKNRKHYLVGDLFALLSAMTYGLFTGRRK---------LDMQKLVGCIGLFT 65
           + + Q S+S +   +LVG+  ALL ++ Y ++T   K         LD+Q  +G +G+FT
Sbjct: 192 SSKQQDSVSASS--FLVGNTLALLGSLGYSVYTTLLKYEISSKGLRLDIQMFLGYVGIFT 249

Query: 66  LVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAA 125
            +  W ++  L    +E  F  P +   + +++ N  +  FVSDYFW   ++ TSPLV  
Sbjct: 250 FLLFWPILIILDITHME-TFELPSNFHISFLVMLNCII-IFVSDYFWCKALILTSPLVVT 307

Query: 126 LGVSLTIPLAMLEDMFIHHQHYSPIYIIGSV 156
           + ++ TIPLAM  D       ++P YIIG +
Sbjct: 308 VALTFTIPLAMFADFVWREAFFTPWYIIGVI 338

May be involved in thiaminediphosphate transport across the mitochondrial membrane.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q4R794|S35F5_MACFA Solute carrier family 35 member F5 OS=Macaca fascicularis GN=SLC35F5 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 10/145 (6%)

Query: 20  SSISKNRKHYLVGDLFALLSAMTYGLFT--------GRRKLDMQKLVGCIGLFTLVALWW 71
           S   K+     +G +++L  AM Y ++            KLD+    G +GLF L+ LW 
Sbjct: 226 SGSEKSAGRNTIGSIWSLAGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWP 285

Query: 72  LVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLT 131
             + L   G E  F FP+      III NG +G  +S++ W  G   TS L+  L +SLT
Sbjct: 286 GFFLLHYTGFE-DFEFPNKVVLMCIII-NGLIGTVLSEFLWLWGCFLTSSLIGTLALSLT 343

Query: 132 IPLAMLEDMFIHHQHYSPIYIIGSV 156
           IPL+++ DM +    +S ++  G++
Sbjct: 344 IPLSIIADMCMQKVQFSWLFFAGAI 368

Putative solute transporter.

Macaca fascicularis (taxid: 9541)

>sp|Q8WV83|S35F5_HUMAN Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 10/134 (7%)

Query: 31  VGDLFALLSAMTYGLFT--------GRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIE 82
           VG +++L  AM Y ++            KLD+    G +GLF L+ LW   + L   G E
Sbjct: 328 VGSIWSLAGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFE 387

Query: 83  PKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFI 142
             F FP+      III NG +G  +S++ W  G   TS L+  L +SLTIPL+++ DM +
Sbjct: 388 -DFEFPNKVVLMCIII-NGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCM 445

Query: 143 HHQHYSPIYIIGSV 156
               +S ++  G++
Sbjct: 446 QKVQFSWLFFAGAI 459

Putative solute transporter.

Homo sapiens (taxid: 9606)

>sp|A6QL92|S35F5_BOVIN Solute carrier family 35 member F5 OS=Bos taurus GN=SLC35F5 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 10/145 (6%)

Query: 20  SSISKNRKHYLVGDLFALLSAMTYGLFT--------GRRKLDMQKLVGCIGLFTLVALWW 71
           S   K+     +G +++L+ AM Y ++            KLD+    G +GLF L+ LW 
Sbjct: 318 SGSEKSPGRNTIGSIWSLVGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWP 377

Query: 72  LVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLT 131
             + L   G E  F FP+      I+I NG +G  +S++ W  G   TS L+  L +SLT
Sbjct: 378 GFFLLHYTGFE-DFEFPNKVVLMCIVI-NGLIGTVLSEFLWLWGCFLTSSLIGTLALSLT 435

Query: 132 IPLAMLEDMFIHHQHYSPIYIIGSV 156
           IPL+++ DM +    +S ++  G++
Sbjct: 436 IPLSIIADMCMQKVQFSWLFFAGAI 460

Putative solute transporter.

Bos taurus (taxid: 9913)

>sp|Q5R6J3|S35F5_PONAB Solute carrier family 35 member F5 OS=Pongo abelii GN=SLC35F5 PE=2 SV=1

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 10/134 (7%)

Query: 31  VGDLFALLSAMTYGLFT--------GRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIE 82
           +G +++L  AM Y ++            KLD+    G +GLF L+ LW   + L   G E
Sbjct: 328 IGSIWSLAGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFE 387

Query: 83  PKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFI 142
             F FP+      III NG +G  +S++ W  G   TS L+  L +SLTIPL+++ DM +
Sbjct: 388 -DFEFPNKVVLMCIII-NGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCM 445

Query: 143 HHQHYSPIYIIGSV 156
               +S ++  G++
Sbjct: 446 QKVQFSWLFFAGAI 459

Putative solute transporter.

Pongo abelii (taxid: 9601)

>sp|Q8R314|S35F5_MOUSE Solute carrier family 35 member F5 OS=Mus musculus GN=Slc35f5 PE=2 SV=1

 Score = 68.9 bits (167), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 10/134 (7%)

Query: 31  VGDLFALLSAMTYGLFT--------GRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIE 82
           +G +++L  AM Y ++            KLD+    G +GLF L+ LW   + L   G E
Sbjct: 329 IGSIWSLAGAMFYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFE 388

Query: 83  PKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFI 142
             F FP+      III NG +G  +S++ W  G   TS L+  L +SLTIPL+++ DM +
Sbjct: 389 -DFEFPNKVVLLCIII-NGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCM 446

Query: 143 HHQHYSPIYIIGSV 156
               +S ++  G++
Sbjct: 447 QKVQFSWLFFAGAI 460

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|O94654|YGF3_SCHPO Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC405.03c PE=3 SV=1

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 2/98 (2%)

Query: 59  GCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVR 118
           G +GLF L+ LW  +  L   G+E +F+ P +     ++I N  +  FVSDY W + ++ 
Sbjct: 229 GLVGLFDLILLWPFLIILHLYGVE-RFSLPSTTAGLIVLIINASI-TFVSDYLWVIAMLM 286

Query: 119 TSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSV 156
           TSPL+  +G+SL+IPLA+  D+ +   + +   I+GS+
Sbjct: 287 TSPLLVTVGMSLSIPLALFFDILLKGHYLNFSLILGSL 324

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
255579849	411	conserved hypothetical protein [Ricinus	0.757	0.379	0.704	1e-58
449519274	425	PREDICTED: uncharacterized vacuolar memb	0.762	0.369	0.678	2e-58
449465593	425	PREDICTED: uncharacterized vacuolar memb	0.762	0.369	0.678	2e-58
224141921	346	predicted protein [Populus trichocarpa]	0.757	0.450	0.706	3e-58
224089286	391	predicted protein [Populus trichocarpa]	0.757	0.398	0.698	3e-57
147792538	396	hypothetical protein VITISV_001627 [Viti	0.757	0.393	0.688	9e-57
225430460	396	PREDICTED: uncharacterized vacuolar memb	0.757	0.393	0.688	9e-57
356515282	394	PREDICTED: uncharacterized vacuolar memb	0.752	0.393	0.664	2e-55
356507620	392	PREDICTED: uncharacterized vacuolar memb	0.747	0.392	0.658	4e-55
356552508	393	PREDICTED: uncharacterized vacuolar memb	0.757	0.396	0.650	4e-55

>gi|255579849|ref|XP_002530761.1| conserved hypothetical protein [Ricinus communis] gi|223529677|gb|EEF31621.1| conserved hypothetical protein [Ricinus communis]

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 117/166 (70%), Positives = 131/166 (78%), Gaps = 10/166 (6%)

Query: 1   MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT---------GRRK 51
           M GVA+T +GKTW A   QS  SK++KH L+GDL+A+LSA+TYGLFT         G R 
Sbjct: 203 MTGVALTLVGKTWIAGGSQSRASKDQKHSLIGDLYAVLSALTYGLFTVLLKRFAGEGER- 261

Query: 52  LDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYF 111
           +D+QKL G IGLF LVALWWLVWPLTAMGIEP+F+FP SAK  EIII NGFVGN + DYF
Sbjct: 262 VDVQKLFGYIGLFILVALWWLVWPLTAMGIEPRFSFPQSAKMEEIIIINGFVGNVLCDYF 321

Query: 112 WALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQ 157
           W LGV+ TSPLVAALGVSLTIPLAMLEDM IH QHYS IYIIGS Q
Sbjct: 322 WGLGVIWTSPLVAALGVSLTIPLAMLEDMVIHGQHYSAIYIIGSAQ 367

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449519274|ref|XP_004166660.1| PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Cucumis sativus]

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 112/165 (67%), Positives = 130/165 (78%), Gaps = 8/165 (4%)

Query: 1   MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT--------GRRKL 52
           MAGVAMTT GKT  ADE Q + + N  H L+G++F++LS++TYGLFT        G + L
Sbjct: 224 MAGVAMTTFGKTSAADELQKNANGNENHALLGNVFSVLSSVTYGLFTVLLKKFAGGGQNL 283

Query: 53  DMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFW 112
           D+QKL GCIGLFT VALWWLVWPLTAMGIEP+F FPHSA   E+I+ N FVG+F+SDYFW
Sbjct: 284 DLQKLFGCIGLFTFVALWWLVWPLTAMGIEPRFTFPHSANVEEVILVNAFVGSFLSDYFW 343

Query: 113 ALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQ 157
           AL VV TSPLVAALGVSLTIP+AMLEDM IH + YS IYIIGS Q
Sbjct: 344 ALAVVWTSPLVAALGVSLTIPIAMLEDMVIHGRQYSVIYIIGSAQ 388

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465593|ref|XP_004150512.1| PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Cucumis sativus]

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 112/165 (67%), Positives = 130/165 (78%), Gaps = 8/165 (4%)

Query: 1   MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT--------GRRKL 52
           MAGVAMTT GKT  ADE Q + + N  H L+G++F++LS++TYGLFT        G + L
Sbjct: 224 MAGVAMTTFGKTSAADELQKNANGNENHALLGNVFSVLSSVTYGLFTVLLKKFAGGGQNL 283

Query: 53  DMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFW 112
           D+QKL GCIGLFT VALWWLVWPLTAMGIEP+F FPHSA   E+I+ N FVG+F+SDYFW
Sbjct: 284 DLQKLFGCIGLFTFVALWWLVWPLTAMGIEPRFTFPHSANVEEVILVNAFVGSFLSDYFW 343

Query: 113 ALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQ 157
           AL VV TSPLVAALGVSLTIP+AMLEDM IH + YS IYIIGS Q
Sbjct: 344 ALAVVWTSPLVAALGVSLTIPIAMLEDMVIHGRQYSVIYIIGSAQ 388

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141921|ref|XP_002324309.1| predicted protein [Populus trichocarpa] gi|222865743|gb|EEF02874.1| predicted protein [Populus trichocarpa]

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 118/167 (70%), Positives = 132/167 (79%), Gaps = 11/167 (6%)

Query: 1   MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT----------GRR 50
           MAGVAMTT+GKTW AD+ Q S S N K  LVGDLF LLSAM+YGLFT          G R
Sbjct: 161 MAGVAMTTLGKTWAADDSQLSASANGKRSLVGDLFGLLSAMSYGLFTVLLKKFAGEEGER 220

Query: 51  KLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDY 110
            +D+QKL G IGLFTLVALWWLVWPLTA+GIEPKF  PHSAK  EI++ANGFVG+ +SDY
Sbjct: 221 -VDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKLDEIVLANGFVGSVLSDY 279

Query: 111 FWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQ 157
           FWAL VV T+PLVA LG+SLTIPLAML DM IH +HYS IYI+GSVQ
Sbjct: 280 FWALCVVWTTPLVATLGMSLTIPLAMLADMVIHGRHYSAIYILGSVQ 326

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089286|ref|XP_002308677.1| predicted protein [Populus trichocarpa] gi|222854653|gb|EEE92200.1| predicted protein [Populus trichocarpa]

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 116/166 (69%), Positives = 130/166 (78%), Gaps = 10/166 (6%)

Query: 1   MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT---------GRRK 51
           MAGVAMTT+GKTW ADE   S S N K  LVGDLF LLSA++YGLFT         G R 
Sbjct: 207 MAGVAMTTLGKTWAADESPLSASTNGKRSLVGDLFGLLSAVSYGLFTVLLKKFAGEGER- 265

Query: 52  LDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYF 111
           +D+QKL G IGLFTLVALWWLVWPLTA+GIEPKF  PHSAK  EI++ANGFVG+ +SDYF
Sbjct: 266 VDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKVDEIVLANGFVGSVLSDYF 325

Query: 112 WALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQ 157
           WAL VV T+PLVA LG+SLTIPLAML DM IH +HYS IYI+GS Q
Sbjct: 326 WALSVVWTTPLVATLGMSLTIPLAMLADMVIHGRHYSAIYILGSAQ 371

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147792538|emb|CAN72310.1| hypothetical protein VITISV_001627 [Vitis vinifera]

 Score =  225 bits (573), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 115/167 (68%), Positives = 130/167 (77%), Gaps = 11/167 (6%)

Query: 1   MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT----------GRR 50
           MAGVAMTT+GKTW  DE + S S N K  LVGDLF LLSAM+YGLFT          G R
Sbjct: 211 MAGVAMTTMGKTWATDESKLSASLNGKRSLVGDLFGLLSAMSYGLFTVLLKKFAGEEGER 270

Query: 51  KLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDY 110
            +D+QKL G IGLFTLVALWWLVWPLTA+GIEPKF  PHSAK  E++IANGFVG+ +SDY
Sbjct: 271 -VDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMDEVVIANGFVGSVLSDY 329

Query: 111 FWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQ 157
           FWAL VV T+PLVA LG+SLTIPLAM+ DM IH +HYS IYI+GS Q
Sbjct: 330 FWALCVVWTTPLVATLGMSLTIPLAMVADMMIHGRHYSAIYILGSAQ 376

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430460|ref|XP_002285494.1| PREDICTED: uncharacterized vacuolar membrane protein YML018C [Vitis vinifera] gi|296082125|emb|CBI21130.3| unnamed protein product [Vitis vinifera]

 Score =  225 bits (573), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 115/167 (68%), Positives = 130/167 (77%), Gaps = 11/167 (6%)

Query: 1   MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT----------GRR 50
           MAGVAMTT+GKTW  DE + S S N K  LVGDLF LLSAM+YGLFT          G R
Sbjct: 211 MAGVAMTTMGKTWATDESKLSASLNGKRSLVGDLFGLLSAMSYGLFTVLLKKFAGEEGER 270

Query: 51  KLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDY 110
            +D+QKL G IGLFTLVALWWLVWPLTA+GIEPKF  PHSAK  E++IANGFVG+ +SDY
Sbjct: 271 -VDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMDEVVIANGFVGSVLSDY 329

Query: 111 FWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQ 157
           FWAL VV T+PLVA LG+SLTIPLAM+ DM IH +HYS IYI+GS Q
Sbjct: 330 FWALCVVWTTPLVATLGMSLTIPLAMVADMMIHGRHYSAIYILGSAQ 376

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515282|ref|XP_003526330.1| PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Glycine max]

 Score =  220 bits (561), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 111/167 (66%), Positives = 130/167 (77%), Gaps = 12/167 (7%)

Query: 1   MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT----------GRR 50
           MAGV MTT+GKTW ADE Q S   + KH LVGDLF +LSAM+YGLFT          G R
Sbjct: 210 MAGVVMTTLGKTWAADESQLS-DASGKHSLVGDLFGILSAMSYGLFTVLLKKFSGEEGER 268

Query: 51  KLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDY 110
            +D+QKL G IGLFTLVALWWLVWPL A+GIEPKF  PHSAK  E+++ANGF+G+ +SDY
Sbjct: 269 -VDVQKLFGYIGLFTLVALWWLVWPLMALGIEPKFTIPHSAKVDEVVLANGFIGSVLSDY 327

Query: 111 FWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQ 157
           FWAL VV T+PLVA LG+SLTIPLAM+ DM IH +HYS +YI+GSVQ
Sbjct: 328 FWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAVYILGSVQ 374

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356507620|ref|XP_003522562.1| PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Glycine max]

 Score =  219 bits (559), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 110/167 (65%), Positives = 130/167 (77%), Gaps = 13/167 (7%)

Query: 1   MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT----------GRR 50
           MAGV MTT+GKTW ADE Q  +S   KH LVGDLF +LSAM+YGLFT          G R
Sbjct: 209 MAGVVMTTLGKTWAADESQ--LSDAGKHSLVGDLFGILSAMSYGLFTVLLKKFSGEEGER 266

Query: 51  KLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDY 110
            +D+QKL G IGLFTLVALWWL+WPL A+GIEPKF  PHSAK  E+++ANGF+G+ +SDY
Sbjct: 267 -VDVQKLFGYIGLFTLVALWWLIWPLMALGIEPKFTIPHSAKVDEVVLANGFIGSVLSDY 325

Query: 111 FWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQ 157
           FWAL VV T+PLVA LG+SLTIPLAM+ DM IH +HYS +YI+GSVQ
Sbjct: 326 FWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAVYILGSVQ 372

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552508|ref|XP_003544609.1| PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Glycine max]

 Score =  219 bits (559), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 108/166 (65%), Positives = 131/166 (78%), Gaps = 10/166 (6%)

Query: 1   MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT---------GRRK 51
           M+GV MTT+GKTW AD+  SS S N +  LVGDLF LLSAM+YGLFT         G  +
Sbjct: 209 MSGVVMTTLGKTWAADDALSSAS-NGQRSLVGDLFGLLSAMSYGLFTVLLKKISGEGGER 267

Query: 52  LDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYF 111
           +D+QKL G +GLFTLVALWWL+WPL+A+GIEPKF  PHSA+  E+++ANGFVG+ +SDYF
Sbjct: 268 VDVQKLFGYVGLFTLVALWWLIWPLSALGIEPKFTIPHSARVDEVVLANGFVGSVLSDYF 327

Query: 112 WALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQ 157
           WAL VV T+PLVA LG+SLTIPLAML DM IH +HYS +YI+GSVQ
Sbjct: 328 WALCVVWTTPLVATLGMSLTIPLAMLADMVIHGRHYSALYILGSVQ 373

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
TAIR|locus:2116657	394	AT4G32140 "AT4G32140" [Arabido	0.762	0.398	0.644	6.3e-53
SGD|S000004480	393	YML018C "Protein of unknown fu	0.601	0.315	0.373	4.7e-17
SGD|S000002846	370	THI74 "Mitochondrial transport	0.669	0.372	0.324	1.4e-15
CGD|CAL0005492	404	orf19.7427 [Candida albicans (	0.723	0.368	0.347	2.4e-15
UNIPROTKB|Q5A2Y4	404	CaO19.7427 "Putative uncharact	0.723	0.368	0.347	2.4e-15
POMBASE|SPBC405.03c	341	SPBC405.03c "membrane transpor	0.674	0.407	0.311	1e-14
UNIPROTKB|H7C0S5	242	SLC35F5 "Solute carrier family	0.601	0.512	0.350	3e-14
UNIPROTKB|E2RAG9	524	SLC35F5 "Uncharacterized prote	0.655	0.257	0.331	1.5e-13
UNIPROTKB|F1RY25	524	SLC35F5 "Uncharacterized prote	0.655	0.257	0.324	1.5e-13
UNIPROTKB|A6QL92	524	SLC35F5 "Solute carrier family	0.655	0.257	0.324	1.9e-13

TAIR|locus:2116657 AT4G32140 "AT4G32140" [Arabidopsis thaliana (taxid:3702)]

 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 107/166 (64%), Positives = 128/166 (77%)

Query:     1 MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFTGRRK--------- 51
             MAGV MTT+GKTW +DE Q + S N +  L+GDLF LLSA++YGLFT   K         
Sbjct:   209 MAGVVMTTLGKTWASDESQLNSSLNGERSLMGDLFGLLSAVSYGLFTVLLKKFAGEEGEG 268

Query:    52 LDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYF 111
             +D+QKL G IGLFTLVALWWLVWPLTA+GIEPKF  PHS K  E+++ANGF+G+ +SDYF
Sbjct:   269 VDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSVKVDEVVLANGFIGSVLSDYF 328

Query:   112 WALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQ 157
             WAL VV T+PLVA LG+SLTIPLAM+ DM IH +HYS IYI+GS Q
Sbjct:   329 WALSVVWTTPLVATLGMSLTIPLAMVADMMIHGRHYSAIYILGSTQ 374

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

SGD|S000004480 YML018C "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 214 (80.4 bits), Expect = 4.7e-17, P = 4.7e-17
 Identities = 50/134 (37%), Positives = 77/134 (57%)

Query:    30 LVGDLFALLSAMTYGLFTG--RR------KLDMQKLVGCIGLFTLVALWWLVWPLTAMGI 81
             L+G+L AL  A+ YG+++   +R      +++M+   G +GLF L+ LW  +  L   G 
Sbjct:   224 LIGNLLALAGAVLYGVYSTLLKREVGDETRVNMKIFFGFVGLFNLLFLWPSLIVLDFFGW 283

Query:    82 EPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMF 141
             EP F+ P   K   II  N  +  FVSD+ WA  ++ TSPL   +G+S+TIPLAM  D+ 
Sbjct:   284 EP-FSLPKDPKVVVIIFVNCLI-TFVSDFCWAKAMLLTSPLTVTVGLSITIPLAMFGDVI 341

Query:   142 IHHQHYSPIYIIGS 155
               H+  S +Y+ G+
Sbjct:   342 FKHKTMSALYLFGA 355

GO:0000329 "fungal-type vacuole membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IEA

GO:0005773 "vacuole" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0055085 "transmembrane transport" evidence=IEA

SGD|S000002846 THI74 "Mitochondrial transporter repressible by thiamine" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 200 (75.5 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 49/151 (32%), Positives = 81/151 (53%)

Query:    15 ADEPQSSISKNRKHYLVGDLFALLSAMTYGLFTGRRK---------LDMQKLVGCIGLFT 65
             + + Q S+S +   +LVG+  ALL ++ Y ++T   K         LD+Q  +G +G+FT
Sbjct:   192 SSKQQDSVSASS--FLVGNTLALLGSLGYSVYTTLLKYEISSKGLRLDIQMFLGYVGIFT 249

Query:    66 LVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAA 125
              +  W ++  L    +E  F  P +   + +++ N  +  FVSDYFW   ++ TSPLV  
Sbjct:   250 FLLFWPILIILDITHMET-FELPSNFHISFLVMLNCII-IFVSDYFWCKALILTSPLVVT 307

Query:   126 LGVSLTIPLAMLEDMFIHHQHYSPIYIIGSV 156
             + ++ TIPLAM  D       ++P YIIG +
Sbjct:   308 VALTFTIPLAMFADFVWREAFFTPWYIIGVI 338

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA;ISM

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

CGD|CAL0005492 orf19.7427 [Candida albicans (taxid:5476)]

 Score = 199 (75.1 bits), Expect = 2.4e-15, P = 2.4e-15
 Identities = 58/167 (34%), Positives = 84/167 (50%)

Query:     2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT------------GR 49
             AGV + T     T D P +  S      L G++ ALL A+ YG++T             R
Sbjct:   221 AGVLIVTKADA-TEDNPNTDNSALL--ILWGNILALLGALIYGIYTILLKFKITIPHSKR 277

Query:    50 RK-LDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVS 108
              K L+     G +G+F LV LW ++  L    +E KF  P ++  A II AN  +  FVS
Sbjct:   278 EKNLNTHLFFGFVGIFCLVFLWPMLVMLNYFRVE-KFELPPTSSVATIIAANAVI-TFVS 335

Query:   109 DYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGS 155
             D+ W   V+ TSPL   +G+S+TIPLAM+ D        + +Y+ G+
Sbjct:   336 DFCWCNAVLLTSPLTVTVGLSMTIPLAMVGDWVFKQFKLNLLYVFGA 382

GO:0003674 "molecular_function" evidence=ND

GO:0000329 "fungal-type vacuole membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5A2Y4 CaO19.7427 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 199 (75.1 bits), Expect = 2.4e-15, P = 2.4e-15
 Identities = 58/167 (34%), Positives = 84/167 (50%)

Query:     2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT------------GR 49
             AGV + T     T D P +  S      L G++ ALL A+ YG++T             R
Sbjct:   221 AGVLIVTKADA-TEDNPNTDNSALL--ILWGNILALLGALIYGIYTILLKFKITIPHSKR 277

Query:    50 RK-LDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVS 108
              K L+     G +G+F LV LW ++  L    +E KF  P ++  A II AN  +  FVS
Sbjct:   278 EKNLNTHLFFGFVGIFCLVFLWPMLVMLNYFRVE-KFELPPTSSVATIIAANAVI-TFVS 335

Query:   109 DYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGS 155
             D+ W   V+ TSPL   +G+S+TIPLAM+ D        + +Y+ G+
Sbjct:   336 DFCWCNAVLLTSPLTVTVGLSMTIPLAMVGDWVFKQFKLNLLYVFGA 382

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

POMBASE|SPBC405.03c SPBC405.03c "membrane transporter (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 191 (72.3 bits), Expect = 1.0e-14, P = 1.0e-14
 Identities = 48/154 (31%), Positives = 86/154 (55%)

Query:    14 TADEPQSSISKNR-KHYLVGDLFALLSAMTYGLFTGRRKLDMQK--------LVGCIGLF 64
             T D  Q+ ++ +      +G+ +ALL+A+ YG ++   K  + +          G +GLF
Sbjct:   175 TQDAKQADLNDSPPSRPALGNAYALLAALLYGCYSVMVKFHITEESCVSTRLFFGLVGLF 234

Query:    65 TLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVA 124
              L+ LW  +  L   G+E +F+ P +     ++I N  +  FVSDY W + ++ TSPL+ 
Sbjct:   235 DLILLWPFLIILHLYGVE-RFSLPSTTAGLIVLIINASI-TFVSDYLWVIAMLMTSPLLV 292

Query:   125 ALGVSLTIPLAMLEDMFI--HHQHYSPIYIIGSV 156
              +G+SL+IPLA+  D+ +  H+ ++S   I+GS+
Sbjct:   293 TVGMSLSIPLALFFDILLKGHYLNFS--LILGSL 324

GO:0000139 "Golgi membrane" evidence=IEA

GO:0000329 "fungal-type vacuole membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=ISM

GO:0055085 "transmembrane transport" evidence=ISM

UNIPROTKB|H7C0S5 SLC35F5 "Solute carrier family 35 member F5" [Homo sapiens (taxid:9606)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 47/134 (35%), Positives = 74/134 (55%)

Query:    31 VGDLFALLSAMTYGLFTG--RRKLDMQ-KL-----VGCIGLFTLVALWWLVWPLTAMGIE 82
             VG +++L  AM Y ++    +RK+D + KL      G +GLF L+ LW   + L   G E
Sbjct:    91 VGSIWSLAGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFE 150

Query:    83 PKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFI 142
               F FP+      III NG +G  +S++ W  G   TS L+  L +SLTIPL+++ DM +
Sbjct:   151 D-FEFPNKVVLMCIII-NGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCM 208

Query:   143 HHQHYSPIYIIGSV 156
                 +S ++  G++
Sbjct:   209 QKVQFSWLFFAGAI 222

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|E2RAG9 SLC35F5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 185 (70.2 bits), Expect = 1.5e-13, P = 1.5e-13
 Identities = 48/145 (33%), Positives = 78/145 (53%)

Query:    20 SSISKNRKHYLVGDLFALLSAMTYGLFTG--RRKLDMQ-KL-----VGCIGLFTLVALWW 71
             S   K+     +G +++L+ AM Y ++    +RK+D + KL      G +GLF L+ LW 
Sbjct:   318 SGSEKSAGRDTIGSIWSLVGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWP 377

Query:    72 LVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLT 131
               + L   G E  F FP+      III NG +G  +S++ W  G   TS L+  L +SLT
Sbjct:   378 GFFLLHYTGFED-FEFPNKVVLMCIII-NGLIGTVLSEFLWLWGCFLTSSLIGTLALSLT 435

Query:   132 IPLAMLEDMFIHHQHYSPIYIIGSV 156
             IPL+++ DM +    +S ++  G++
Sbjct:   436 IPLSIIADMCMQKVQFSWLFFAGAI 460

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1RY25 SLC35F5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 185 (70.2 bits), Expect = 1.5e-13, P = 1.5e-13
 Identities = 47/145 (32%), Positives = 77/145 (53%)

Query:    20 SSISKNRKHYLVGDLFALLSAMTYGLFTG--RRKLDMQ-KL-----VGCIGLFTLVALWW 71
             S   K+     +G +++L+ AM Y ++    +RK+D + KL      G +GLF L+ LW 
Sbjct:   318 SGSEKSAGRDTIGSIWSLVGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWP 377

Query:    72 LVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLT 131
               + L   G E  F FP+       II NG +G  +S++ W  G   TS L+  L +SLT
Sbjct:   378 GFFLLHYTGFED-FEFPNKV-VLMCIIVNGLIGTVLSEFLWLWGCFLTSSLIGTLALSLT 435

Query:   132 IPLAMLEDMFIHHQHYSPIYIIGSV 156
             IPL+++ DM +    +S ++  G++
Sbjct:   436 IPLSIIADMCMQKVQFSWLFFAGAI 460

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|A6QL92 SLC35F5 "Solute carrier family 35 member F5" [Bos taurus (taxid:9913)]

 Score = 184 (69.8 bits), Expect = 1.9e-13, P = 1.9e-13
 Identities = 47/145 (32%), Positives = 78/145 (53%)

Query:    20 SSISKNRKHYLVGDLFALLSAMTYGLFTG--RRKLDMQ-KL-----VGCIGLFTLVALWW 71
             S   K+     +G +++L+ AM Y ++    +RK+D + KL      G +GLF L+ LW 
Sbjct:   318 SGSEKSPGRNTIGSIWSLVGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWP 377

Query:    72 LVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLT 131
               + L   G E  F FP+      I+I NG +G  +S++ W  G   TS L+  L +SLT
Sbjct:   378 GFFLLHYTGFED-FEFPNKVVLMCIVI-NGLIGTVLSEFLWLWGCFLTSSLIGTLALSLT 435

Query:   132 IPLAMLEDMFIHHQHYSPIYIIGSV 156
             IPL+++ DM +    +S ++  G++
Sbjct:   436 IPLSIIADMCMQKVQFSWLFFAGAI 460

GO:0016021 "integral to membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	206
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	3e-04

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 7/131 (5%)

Query: 28  HYLVGDLFALLSAMTYGLFT--GRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKF 85
             L+G L AL +A+ + L+T   +R   +  +   + L  L+AL  L+    +      F
Sbjct: 151 LSLLGLLLALAAALLWALYTALVKRLSRLGPVTLALLLQLLLALLLLLLFFLSG-----F 205

Query: 86  AFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQ 145
             P  ++   +++  G     ++   W   +      + AL   L    A L  + +  +
Sbjct: 206 GAPILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGE 265

Query: 146 HYSPIYIIGSV 156
             SP  ++G+ 
Sbjct: 266 PLSPAQLLGAA 276

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	206
KOG2765	416	consensus Predicted membrane protein [Function unk	100.0
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.82
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.69
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.61
PRK11689	295	aromatic amino acid exporter; Provisional	99.6
PLN00411	358	nodulin MtN21 family protein; Provisional	99.58
PRK11272	292	putative DMT superfamily transporter inner membran	99.58
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.56
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.52
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.44
PRK15430	296	putative chloramphenical resistance permease RarD;	99.3
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.27
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.27
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.24
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.17
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.96
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.89
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.88
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.86
COG2510	140	Predicted membrane protein [Function unknown]	98.8
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.8
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.75
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.71
KOG2766	336	consensus Predicted membrane protein [Function unk	98.69
PRK15430	296	putative chloramphenical resistance permease RarD;	98.64
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.53
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.49
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.36
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.35
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.29
PLN00411	358	nodulin MtN21 family protein; Provisional	98.28
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.1
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	98.09
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.03
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.0
PRK11272	292	putative DMT superfamily transporter inner membran	97.99
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.8
PRK11689	295	aromatic amino acid exporter; Provisional	97.78
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	97.68
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.64
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.59
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.55
COG2962	293	RarD Predicted permeases [General function predict	97.45
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.44
PRK11431	105	multidrug efflux system protein; Provisional	97.36
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.31
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.29
COG2076	106	EmrE Membrane transporters of cations and cationic	97.26
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	97.22
COG2962	293	RarD Predicted permeases [General function predict	97.21
KOG3912	372	consensus Predicted integral membrane protein [Gen	97.08
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.94
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.67
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.65
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.36
KOG1580	337	consensus UDP-galactose transporter related protei	96.1
PRK10532	293	threonine and homoserine efflux system; Provisiona	95.97
KOG1582	367	consensus UDP-galactose transporter related protei	95.74
KOG4510	346	consensus Permease of the drug/metabolite transpor	95.55
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	95.31
KOG1581	327	consensus UDP-galactose transporter related protei	95.23
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.21
PRK13499	345	rhamnose-proton symporter; Provisional	95.0
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	94.75
KOG1443	349	consensus Predicted integral membrane protein [Fun	94.57
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	93.57
KOG2765	416	consensus Predicted membrane protein [Function unk	93.55
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	93.01
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	92.29
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	91.55
PRK13499	345	rhamnose-proton symporter; Provisional	91.25
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	90.8
PF11742	78	DUF3302: Protein of unknown function (DUF3302); In	90.66
KOG2922	335	consensus Uncharacterized conserved protein [Funct	89.11
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	87.85
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	85.77
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	84.14
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	83.05
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	81.83

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=3.9e-33  Score=248.64  Aligned_cols=165  Identities=39%  Similarity=0.667  Sum_probs=148.8

Q ss_pred             CeeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc--------CC-CccchHHHHHHHHHHHHHHHHH
Q 039155            1 MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT--------GR-RKLDMQKLVGCIGLFTLVALWW   71 (206)
Q Consensus         1 ~~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~--------~~-~~~~~~~~~g~vgl~~~l~l~p   71 (206)
                      |+||++++.+|....|      +..++++++||+++++||++||+|+        ++ +|+|++++||++|+|+++.+||
T Consensus       223 i~GViiVt~~~s~~~~------~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP  296 (416)
T KOG2765|consen  223 IAGVIIVTMGDSKQNS------DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWP  296 (416)
T ss_pred             hccEEEEEeccccccc------cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhH
Confidence            6899999999875422      2345678999999999999999999        34 6899999999999999999999


Q ss_pred             HHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHH
Q 039155           72 LVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIY  151 (206)
Q Consensus        72 ~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~  151 (206)
                      ++++||+++.| .|++|+.. ....++.++++.+++++|+|.+|+-+|+|+.++++++++||+|+++|.+++|.++|+.+
T Consensus       297 ~l~iL~~~~~e-~F~lP~~~-q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~  374 (416)
T KOG2765|consen  297 PLIILDFFGEE-RFELPSST-QFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY  374 (416)
T ss_pred             HHHHHHHhccC-cccCCCCc-eeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH
Confidence            99999999999 59999875 45667888899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhheeccccchh
Q 039155          152 IIGSVQNSSQNRWIDIAEFKTI  173 (206)
Q Consensus       152 iiG~~LIl~G~~l~~~~~~~~~  173 (206)
                      ++|++.|++||.++++..+...
T Consensus       375 iiGsi~Ifv~Fv~vn~~~~~~~  396 (416)
T KOG2765|consen  375 IIGSIPIFVGFVIVNISSENSK  396 (416)
T ss_pred             HHHHHHHHHHHhheeccccccc
Confidence            9999999999999997755433

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.82  E-value=2.2e-19  Score=160.87  Aligned_cols=168  Identities=18%  Similarity=0.257  Sum_probs=139.6

Q ss_pred             CeeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc--CC---CccchHHHHHHHHHHHHHHHHHHHHH
Q 039155            1 MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT--GR---RKLDMQKLVGCIGLFTLVALWWLVWP   75 (206)
Q Consensus         1 ~~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~--~~---~~~~~~~~~g~vgl~~~l~l~p~~~i   75 (206)
                      ++|++++...|....|++     ..++|++.||+++++||++||+|.  +|   ++.+...++|++|++++++.+|.+.+
T Consensus       143 i~Gv~lv~~sD~~~~~~~-----~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~i  217 (334)
T PF06027_consen  143 IAGVVLVVVSDVLSGSDS-----SSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAI  217 (334)
T ss_pred             HhhhhheeeecccccccC-----CCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            468899999986542222     235688999999999999999998  32   34567789999999999999999999


Q ss_pred             hhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHH
Q 039155           76 LTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGS  155 (206)
Q Consensus        76 l~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~  155 (206)
                      ++..++| .++|+.  +.+..++..++ |.++.+.+++..++++||++..++++.+.|.+.++|++++|+++++.+++|.
T Consensus       218 le~~~i~-~~~w~~--~~~~~~v~~~~-~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af  293 (334)
T PF06027_consen  218 LERSGIE-SIHWTS--QVIGLLVGYAL-CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAF  293 (334)
T ss_pred             eehhhhh-ccCCCh--hhHHHHHHHHH-HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHH
Confidence            9999999 487754  45554444444 6778888999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhheeccccchhhhhh
Q 039155          156 VQNSSQNRWIDIAEFKTIITTC  177 (206)
Q Consensus       156 ~LIl~G~~l~~~~~~~~~~~~~  177 (206)
                      ++|++|+.+-+..+.++.++.+
T Consensus       294 ~lIiiG~vvy~~~~~~~~~~~~  315 (334)
T PF06027_consen  294 ALIIIGFVVYNLAESPEEEARR  315 (334)
T ss_pred             HHHHHHhheEEccCCcccccch
Confidence            9999999999977665554433

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.69  E-value=9.2e-16  Score=134.12  Aligned_cols=133  Identities=10%  Similarity=-0.008  Sum_probs=104.1

Q ss_pred             CchhHHHHHHHHHHHHHhc---C--CCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHH
Q 039155           29 YLVGDLFALLSAMTYGLFT---G--RRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFV  103 (206)
Q Consensus        29 ~~lGd~LaLlsA~~yAlY~---~--~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~  103 (206)
                      ...|+++++++|++||.|.   +  .++.+.... .+..+++.+++.|+...   .+.+    .+.+...|..++++|++
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~~~~~~---~~~~----~~~~~~~~~~~l~lgv~  217 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAGAEHGPATV-AIGSLIAALIFVPIGAL---QAGE----ALWHWSILPLGLAVAIL  217 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHHHHHHH---ccCc----ccCCHHHHHHHHHHHHH
Confidence            3579999999999999998   1  123332222 23445555555554432   1111    12234567778899999


Q ss_pred             HHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155          104 GNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE  169 (206)
Q Consensus       104 ~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~  169 (206)
                      ||++++.+|++++++.+|+.+|+..+++|+++.+.+++++||++++.+++|+++|+.|........
T Consensus       218 ~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        218 STALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999999999999999999999999987553

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.61  E-value=1.1e-14  Score=127.48  Aligned_cols=138  Identities=12%  Similarity=0.065  Sum_probs=100.4

Q ss_pred             CchhHHHHHHHHHHHHHhc---CC--Cccc---hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc--c-cCCCCHHHHHHH
Q 039155           29 YLVGDLFALLSAMTYGLFT---GR--RKLD---MQKLVGCIGLFTLVALWWLVWPLTAMGIEPK--F-AFPHSAKTAEII   97 (206)
Q Consensus        29 ~~lGd~LaLlsA~~yAlY~---~~--~~~~---~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~--~-~~P~~~~~w~~l   97 (206)
                      +..||+++++++++||+|.   ++  ++.+   ...+..+.++.+.   .|........+-+..  . ..+.+.+.|..+
T Consensus       141 ~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  217 (299)
T PRK11453        141 AMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPI---IPFFVASLILDGSATMIHSLVTIDMTTILSL  217 (299)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHH---HHHHHHHHHhcCchhhhhhhccCCHHHHHHH
Confidence            3579999999999999999   11  1221   1111112222222   222221111111100  0 012345789999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155           98 IANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE  169 (206)
Q Consensus        98 l~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~  169 (206)
                      +++|++++++++.+|++++++.+|..+++..+++|+++.+.+++++||.+++.+++|+++|+.|+++..+++
T Consensus       218 ~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        218 MYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            999999999999999999999999999999999999999999999999999999999999999999887654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.60  E-value=1.7e-14  Score=126.31  Aligned_cols=131  Identities=14%  Similarity=0.095  Sum_probs=97.6

Q ss_pred             CchhHHHHHHHHHHHHHhc---CC--CccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHH
Q 039155           29 YLVGDLFALLSAMTYGLFT---GR--RKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFV  103 (206)
Q Consensus        29 ~~lGd~LaLlsA~~yAlY~---~~--~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~  103 (206)
                      ...||++++++|++||+|.   ++  ++.+.......   ...+.+++....   .+ +  ...+.+.+.|..+++.++ 
T Consensus       154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~---~~~~~l~~~~~~---~~-~--~~~~~~~~~~~~l~~~~~-  223 (295)
T PRK11689        154 NPLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFFI---LTALALWIKYFL---SP-Q--PAMVFSLPAIIKLLLAAA-  223 (295)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHH---HHHHHHHHHHHH---hc-C--ccccCCHHHHHHHHHHHH-
Confidence            3579999999999999999   21  23332221111   112222222221   11 2  122234467888888885 


Q ss_pred             HHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155          104 GNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE  169 (206)
Q Consensus       104 ~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~  169 (206)
                      ++.+++++|++++++.+|+.+++..+++|+++.+.+++++||++++.+++|+++|+.|+++....+
T Consensus       224 ~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        224 AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            799999999999999999999999999999999999999999999999999999999998887543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.58  E-value=5.3e-14  Score=127.24  Aligned_cols=142  Identities=10%  Similarity=0.046  Sum_probs=97.9

Q ss_pred             CchhHHHHHHHHHHHHHhc---CC--CccchH-HHHHHHHHHHHHHHHHHHHHhhhcCCCC-cccCCCCHHHHHHHHHHH
Q 039155           29 YLVGDLFALLSAMTYGLFT---GR--RKLDMQ-KLVGCIGLFTLVALWWLVWPLTAMGIEP-KFAFPHSAKTAEIIIANG  101 (206)
Q Consensus        29 ~~lGd~LaLlsA~~yAlY~---~~--~~~~~~-~~~g~vgl~~~l~l~p~~~il~~~g~e~-~~~~P~~~~~w~~ll~lg  101 (206)
                      ..+|+++++++|++||+|.   ++  .+++.. ....+.++++.+...++...  ..+.+. ......+.. +..+++.+
T Consensus       187 ~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~-~~~i~y~~  263 (358)
T PLN00411        187 WLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLV--VEKNNPSVWIIHFDIT-LITIVTMA  263 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHH--HccCCcccceeccchH-HHHHHHHH
Confidence            3679999999999999998   11  233211 21222222222222222221  111110 001111112 33477788


Q ss_pred             HHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccchhh
Q 039155          102 FVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTII  174 (206)
Q Consensus       102 l~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~~~  174 (206)
                      ++ +.+++++|++++++.+|+.++++.+++|+++++.+++++||++++.+++|+++|++|++++.+++.||.+
T Consensus       264 i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~~  335 (358)
T PLN00411        264 II-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEK  335 (358)
T ss_pred             HH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            76 5689999999999999999999999999999999999999999999999999999999999977665543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.58  E-value=1.1e-13  Score=120.86  Aligned_cols=135  Identities=12%  Similarity=-0.002  Sum_probs=102.4

Q ss_pred             chhHHHHHHHHHHHHHhc---CC-CccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHH
Q 039155           30 LVGDLFALLSAMTYGLFT---GR-RKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGN  105 (206)
Q Consensus        30 ~lGd~LaLlsA~~yAlY~---~~-~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~s  105 (206)
                      ..|++++++++++||.|.   ++ ++.+......+...++.+.+.|....   .+ ++ ....++...|..+++++++++
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~-~~~~~~~~~~~~i~~l~i~~s  223 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLL---SG-ER-LTALPTLSGFLALGYLAVFGS  223 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHH---cC-Cc-ccccCCHHHHHHHHHHHHHHH
Confidence            579999999999999999   21 11111112222223344444443332   11 11 212223467999999999999


Q ss_pred             HHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155          106 FVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE  169 (206)
Q Consensus       106 vl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~  169 (206)
                      ++++.+|++++++.++..+++..+++|+++++.+++++||++++.+++|+++|+.|+++.+..+
T Consensus       224 ~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        224 IIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999987543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.56  E-value=9.1e-15  Score=122.33  Aligned_cols=161  Identities=17%  Similarity=0.283  Sum_probs=138.3

Q ss_pred             CeeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc--------CCCccchHHHHHHHHHHHHHHHHHH
Q 039155            1 MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT--------GRRKLDMQKLVGCIGLFTLVALWWL   72 (206)
Q Consensus         1 ~~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~--------~~~~~~~~~~~g~vgl~~~l~l~p~   72 (206)
                      +.|+++++|.|...            ..+..|...+++||.+-|+|.        +..--+...++++.|++++.+.|.+
T Consensus       117 I~GiVmiay~DN~~------------a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~  184 (290)
T KOG4314|consen  117 IGGIVMIAYADNEH------------ADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFP  184 (290)
T ss_pred             hCcEEEEEeccchh------------hhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhh
Confidence            47999999998753            235899999999999999999        2333567889999999999999988


Q ss_pred             HHHhhhcCCCCccc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHH
Q 039155           73 VWPLTAMGIEPKFA-FPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIY  151 (206)
Q Consensus        73 ~~il~~~g~e~~~~-~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~  151 (206)
                      .+++.++|.|. .+ +.  ..+|+-+++.+.+ ++-.+++.|+++.++.|...|+++.+.+|..+.+|.++.+-.++...
T Consensus       185 ~lIL~~T~VE~-~qsFA--~~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~  260 (290)
T KOG4314|consen  185 ALILAFTGVEH-LQSFA--AAPWGCLCGAAGL-SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLF  260 (290)
T ss_pred             HHHHHHhchHH-HHHHh--hCCchhhhhHHHH-HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHH
Confidence            88899999994 33 22  2478989888887 78889999999999999999999999999999999999888899999


Q ss_pred             HHHHHHHHHHhhheeccccchhhhhh
Q 039155          152 IIGSVQNSSQNRWIDIAEFKTIITTC  177 (206)
Q Consensus       152 iiG~~LIl~G~~l~~~~~~~~~~~~~  177 (206)
                      +.|..+|+.||++...++.|+-...|
T Consensus       261 La~T~iI~i~FiLiiiP~d~~eI~~~  286 (290)
T KOG4314|consen  261 LAATCIICIGFILIIIPEDKDEIGGN  286 (290)
T ss_pred             HHHHHHHHHhHHheecccchhhccce
Confidence            99999999999999988776544433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.52  E-value=3.7e-13  Score=114.14  Aligned_cols=127  Identities=19%  Similarity=0.251  Sum_probs=100.3

Q ss_pred             CchhHHHHHHHHHHHHHhc---C--CCccc--hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHH
Q 039155           29 YLVGDLFALLSAMTYGLFT---G--RRKLD--MQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANG  101 (206)
Q Consensus        29 ~~lGd~LaLlsA~~yAlY~---~--~~~~~--~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lg  101 (206)
                      ...|++++++++++|+.|.   +  .++.+  ...+.....+++.++++|....   .+.+  ...  +.+.|..+++.+
T Consensus       126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~--~~~--~~~~~~~~~~~~  198 (260)
T TIGR00950       126 NPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWF---LGPN--PQA--LSLQWGALLYLG  198 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHh---cCCC--CCc--chHHHHHHHHHH
Confidence            4689999999999999999   1  12233  2223323445566666555443   2211  222  346788899999


Q ss_pred             HHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHh
Q 039155          102 FVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQN  162 (206)
Q Consensus       102 l~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~  162 (206)
                      ++++++++.+|+++++++++..+++..+++|+++++.++++++|++++.+++|.++++.|+
T Consensus       199 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       199 LIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999999999999986

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.44  E-value=3e-13  Score=118.28  Aligned_cols=142  Identities=15%  Similarity=0.105  Sum_probs=99.0

Q ss_pred             CchhHHHHHHHHHHHHHhc---C----CCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccC---CCCHHHHHH
Q 039155           29 YLVGDLFALLSAMTYGLFT---G----RRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEP--KFAF---PHSAKTAEI   96 (206)
Q Consensus        29 ~~lGd~LaLlsA~~yAlY~---~----~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~--~~~~---P~~~~~w~~   96 (206)
                      ...||+++++++++||+|.   +    +++++......+..+++.+.+.|+.....-.+..+  ..+.   ......|..
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            3679999999999999998   1    12455444555666777777777665421100000  0000   000122332


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155           97 IIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF  170 (206)
Q Consensus        97 ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~  170 (206)
                      .+..++.+....+.++.+++++++|+.+++..+++|+++++.+++++||++++.+++|++++++|+++.++.+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~  296 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA  296 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence            33444434444455666899999999999999999999999999999999999999999999999999886543

specificities overlap.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.30  E-value=8.3e-11  Score=103.01  Aligned_cols=79  Identities=10%  Similarity=-0.048  Sum_probs=68.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccch
Q 039155           93 TAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKT  172 (206)
Q Consensus        93 ~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~  172 (206)
                      .|..++..++ ++.+++.+|++++++.+|..+|+..+++|+++.+.+|+++||.+++.+++|+++|++|+.+...+....
T Consensus       212 ~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~~  290 (296)
T PRK15430        212 LNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYT  290 (296)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444455555 588999999999999999999999999999999999999999999999999999999988877554433

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.27  E-value=3.2e-11  Score=108.54  Aligned_cols=138  Identities=14%  Similarity=0.102  Sum_probs=99.2

Q ss_pred             CchhHHHHHHHHHHHHHhc-------CC-C----ccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCC---cccCCCCHHH
Q 039155           29 YLVGDLFALLSAMTYGLFT-------GR-R----KLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEP---KFAFPHSAKT   93 (206)
Q Consensus        29 ~~lGd~LaLlsA~~yAlY~-------~~-~----~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~---~~~~P~~~~~   93 (206)
                      +..|++++++|++++|+|.       ++ +    +.+......+..+++.++++|+...........   ....+.....
T Consensus       192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~  271 (350)
T PTZ00343        192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT  271 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence            3689999999999999998       11 1    244333444556777777777766421100000   0000000112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH----HhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155           94 AEIIIANGFVGNFVSDYFWAL----GVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI  167 (206)
Q Consensus        94 w~~ll~lgl~~svl~~~l~~~----al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~  167 (206)
                      |..+++ .++++.+++++||.    ++++++|...++...+.|+++.+.+++++||++++.+++|++++++|+++-++
T Consensus       272 ~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~  348 (350)
T PTZ00343        272 KGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSL  348 (350)
T ss_pred             hHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhh
Confidence            333444 35568999999995    99999999999999999999999999999999999999999999999988654

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.27  E-value=1.7e-10  Score=97.67  Aligned_cols=132  Identities=20%  Similarity=0.213  Sum_probs=100.5

Q ss_pred             CchhHHHHHHHHHHHHHhc---CC-CccchHHHHH-HHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHH
Q 039155           29 YLVGDLFALLSAMTYGLFT---GR-RKLDMQKLVG-CIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFV  103 (206)
Q Consensus        29 ~~lGd~LaLlsA~~yAlY~---~~-~~~~~~~~~g-~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~  103 (206)
                      +..|+++++++++++|+|.   ++ .+.+...... +..+......++      ....+  ...|.+...|..+.+.|++
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~g~~  223 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLSRLGPVTLALLLQLLLALLLLLL------FFLSG--FGAPILSRAWLLLLYLGVF  223 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHH------HHhcc--ccccCCHHHHHHHHHHHHH
Confidence            4689999999999999988   21 1333222222 111111111111      11122  1145556788899999999


Q ss_pred             HHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155          104 GNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA  168 (206)
Q Consensus       104 ~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~  168 (206)
                      ++.+++++|.+++++.++..++...+++|+++.+.++++++|+++..+++|+.+|+.|+.+....
T Consensus       224 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         224 STGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999876

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.24  E-value=8.2e-11  Score=102.13  Aligned_cols=131  Identities=11%  Similarity=0.079  Sum_probs=91.6

Q ss_pred             chhHHHHHHHHHHHHHhc--CC---Cccch-HHHHHHHHHHHHHHH-HHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHH
Q 039155           30 LVGDLFALLSAMTYGLFT--GR---RKLDM-QKLVGCIGLFTLVAL-WWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGF  102 (206)
Q Consensus        30 ~lGd~LaLlsA~~yAlY~--~~---~~~~~-~~~~g~vgl~~~l~l-~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl  102 (206)
                      ..|+.++++++++|++|.  .+   ++.+. ........ ..++.. .|........+..  ...++. ..+..+++.+.
T Consensus       143 ~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~  218 (281)
T TIGR03340       143 RKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLG-IGFLAMGWPFLLLYLKRHGR--SMFPYA-RQILPSATLGG  218 (281)
T ss_pred             hhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHH-HHHHHHHHHHHHHHHHHhcc--chhhhH-HHHHHHHHHHH
Confidence            468999999999999998  22   11211 00001111 111111 2322211111111  111222 34556788888


Q ss_pred             HHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhh
Q 039155          103 VGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRW  164 (206)
Q Consensus       103 ~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l  164 (206)
                      +++.+++.+|++++++.++..++...+++|+++.+.+++++||+++..+++|+++|++|+++
T Consensus       219 ~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       219 LMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            89999999999999999999999999999999999999999999999999999999999986

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.17  E-value=2.1e-10  Score=85.74  Aligned_cols=109  Identities=14%  Similarity=0.039  Sum_probs=84.0

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhH
Q 039155           52 LDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLT  131 (206)
Q Consensus        52 ~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~  131 (206)
                      .+......+-.+++.+ +++...+....+.   ...  +.+.|..++..|++++.+++.+++++++++++..+++...++
T Consensus        17 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~   90 (126)
T PF00892_consen   17 ISPLSITFWRFLIAGI-LLILLLILGRKPF---KNL--SPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLS   90 (126)
T ss_pred             CCHHHHHHHHHHHHHH-HHHHHHhhccccc---cCC--ChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHH
Confidence            5544444455555554 4444443222221   112  224677788889988999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155          132 IPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWID  166 (206)
Q Consensus       132 ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~  166 (206)
                      |+++.+.++++++|+++..+++|.++++.|++++.
T Consensus        91 pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   91 PVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.96  E-value=3.2e-08  Score=77.60  Aligned_cols=132  Identities=20%  Similarity=0.188  Sum_probs=103.8

Q ss_pred             hHHHHHHHHHHHHHhc-------CC-----CccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc-ccCCC-----CHHH
Q 039155           32 GDLFALLSAMTYGLFT-------GR-----RKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPK-FAFPH-----SAKT   93 (206)
Q Consensus        32 Gd~LaLlsA~~yAlY~-------~~-----~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~-~~~P~-----~~~~   93 (206)
                      |.++++.|.++.|+|.       ++     .+.+....+.+.+..+++++.|+.++......++. .+.+.     ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7789999999999998       22     35555566678888888888888777554442210 11111     2245


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhh
Q 039155           94 AEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRW  164 (206)
Q Consensus        94 w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l  164 (206)
                      +..++..|++ .+..++...+.++++||+..++...+-.++..+.++++++|+++..+++|.++.++|+++
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            6666777775 677888889999999999999999999999999999999999999999999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.89  E-value=1.1e-09  Score=95.47  Aligned_cols=159  Identities=15%  Similarity=0.216  Sum_probs=115.0

Q ss_pred             eeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHH-Hhc--C--CCccc--hH-HHHHHHHHHHHHHHHHHH
Q 039155            2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYG-LFT--G--RRKLD--MQ-KLVGCIGLFTLVALWWLV   73 (206)
Q Consensus         2 ~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yA-lY~--~--~~~~~--~~-~~~g~vgl~~~l~l~p~~   73 (206)
                      .||++++-..-..-|+.+++++.....+..|-..++.|++.-| +|.  +  .++..  +. .+|+.+++   +....  
T Consensus       162 ~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~l---V~s~I--  236 (346)
T KOG4510|consen  162 LGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITL---VVSLI--  236 (346)
T ss_pred             heEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHH---HHHHH--
Confidence            5999997654322233333333333445678777777766555 566  1  12222  22 44544443   33321  


Q ss_pred             HHhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHH
Q 039155           74 WPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYII  153 (206)
Q Consensus        74 ~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~ii  153 (206)
                       ++..  +. .+.+|++++.|..++.+|++ .++++.+...++++-.+..+++.-+.+.++|.+.+++++||.++++.++
T Consensus       237 -~~~~--ig-~~~lP~cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~  311 (346)
T KOG4510|consen  237 -GCAS--IG-AVQLPHCGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWV  311 (346)
T ss_pred             -HHhh--cc-ceecCccccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhh
Confidence             2222  33 37899999999999999997 7999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhheecccc
Q 039155          154 GSVQNSSQNRWIDIAEF  170 (206)
Q Consensus       154 G~~LIl~G~~l~~~~~~  170 (206)
                      |+++|+.+..++.+.+.
T Consensus       312 Ga~~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  312 GAVMVVSSTVWVALKKW  328 (346)
T ss_pred             ceeeeehhHHHHHHHHH
Confidence            99999999998875544

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.88  E-value=3.8e-08  Score=86.58  Aligned_cols=163  Identities=20%  Similarity=0.191  Sum_probs=115.7

Q ss_pred             eeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc--C-----CCccchHHHHHHHHHHHHHHHHHHHH
Q 039155            2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT--G-----RRKLDMQKLVGCIGLFTLVALWWLVW   74 (206)
Q Consensus         2 ~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~--~-----~~~~~~~~~~g~vgl~~~l~l~p~~~   74 (206)
                      +|+++.+++|...+++++.    ...+...|+++.+++.++.|.+.  +     +.+.+....+.+..+++++..++..+
T Consensus       129 ~Gv~~~~~~~~~~~~~~~~----~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~  204 (303)
T PF08449_consen  129 IGVAIFTLSDSSSSSSSNS----SSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLF  204 (303)
T ss_pred             hhHheeeeccccccccccc----ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            5888888887643221111    11222349999999999999887  1     12223334555666777777766555


Q ss_pred             Hhh---hcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHH
Q 039155           75 PLT---AMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIY  151 (206)
Q Consensus        75 il~---~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~  151 (206)
                      .+.   ..... .+..+++ ..+..++.+.+ ++.++...+.+-++..+|+..++...+--+++.+.+++++++++++.+
T Consensus       205 ~l~~~~~~~~~-~f~~~~p-~~~~~l~~~s~-~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~  281 (303)
T PF08449_consen  205 LLPTGEFRSAI-RFISAHP-SVLLYLLLFSL-TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQ  281 (303)
T ss_pred             HHHhhHhhHHH-HHHHHhH-HHHHHHHHHHH-HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHH
Confidence            532   11111 1222222 35666666666 478888888899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhheeccccc
Q 039155          152 IIGSVQNSSQNRWIDIAEFK  171 (206)
Q Consensus       152 iiG~~LIl~G~~l~~~~~~~  171 (206)
                      ++|.+++++|..+-...++|
T Consensus       282 ~~G~~lv~~g~~~~~~~~~k  301 (303)
T PF08449_consen  282 WIGIVLVFAGIFLYSYAKKK  301 (303)
T ss_pred             HHHHHHhHHHHHHHHHhhcc
Confidence            99999999999988766554

; GO: 0055085 transmembrane transport

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.86  E-value=6.4e-08  Score=83.78  Aligned_cols=134  Identities=13%  Similarity=0.071  Sum_probs=99.5

Q ss_pred             chhHHHHHHHHHHHHHhc---CC-CccchH-HHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHH
Q 039155           30 LVGDLFALLSAMTYGLFT---GR-RKLDMQ-KLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVG  104 (206)
Q Consensus        30 ~lGd~LaLlsA~~yAlY~---~~-~~~~~~-~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~  104 (206)
                      ..|..+++.++.||++|+   ++ .+.+-. .=.+.--+.+.++..|+-+.    .-++.+.-|   .....-+..|+++
T Consensus       147 p~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~----~ag~~l~~p---~ll~laLgvavlS  219 (292)
T COG5006         147 PVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAA----QAGPALFSP---SLLPLALGVAVLS  219 (292)
T ss_pred             HHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhh----hcchhhcCh---HHHHHHHHHHHHh
Confidence            689999999999999999   21 211111 11111124455555555442    122213233   3445568899999


Q ss_pred             HHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155          105 NFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF  170 (206)
Q Consensus       105 svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~  170 (206)
                      |++-|.+-+.++++.++-.=++.+++||.++++.+++++||++|+.+++|.++|+++..-.....+
T Consensus       220 SalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~  285 (292)
T COG5006         220 SALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR  285 (292)
T ss_pred             cccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence            999999999999999999999999999999999999999999999999999999998876555444

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.80  E-value=4.6e-08  Score=76.74  Aligned_cols=128  Identities=18%  Similarity=0.120  Sum_probs=93.0

Q ss_pred             HHHHHHHHHHHHHhc-----CCCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCC--CCHHHHHHHHHHHHHHH
Q 039155           33 DLFALLSAMTYGLFT-----GRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFP--HSAKTAEIIIANGFVGN  105 (206)
Q Consensus        33 d~LaLlsA~~yAlY~-----~~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P--~~~~~w~~ll~lgl~~s  105 (206)
                      .+.+++||+++++=.     .-+.+|..+....-.+....+++.++.   ..|.-   +.|  -+.+.|.+++..|+ .+
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~---~~g~~---~~~~~~~~k~~lflilSGl-a~   77 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLL---VTGNW---QAGGEIGPKSWLFLILSGL-AG   77 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHH---hcCce---ecccccCcceehhhhHHHH-HH
Confidence            467899999999866     223343222222222333333322222   23322   122  12378999999996 68


Q ss_pred             HHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155          106 FVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI  167 (206)
Q Consensus       106 vl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~  167 (206)
                      .+++.++.+|++.=.+..+.-.=.+.|.++.++++++++|+++..+++|.+||.+|..++.+
T Consensus        78 glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          78 GLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999988888899999999999999999999999999999999988754

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.80  E-value=2.3e-07  Score=80.56  Aligned_cols=129  Identities=12%  Similarity=-0.072  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHHHhc---CC--CccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHH
Q 039155           33 DLFALLSAMTYGLFT---GR--RKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFV  107 (206)
Q Consensus        33 d~LaLlsA~~yAlY~---~~--~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl  107 (206)
                      .++.+++|++||...   ++  ++.+.  +.........+.+.|....- ..+.+  ...| ..+.|. .+..+.++...
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~--~~~~~~~~~~~~l~~~~~~~-~~~~~--~~~~-~~~~~~-~~~~~~~~~~~   75 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPD--FLWWALLAHSVLLTPYGLWY-LAQVG--WSRL-PATFWL-LLAISAVANMV   75 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhH--HHHHHHHHHHHHHHHHHHHh-cccCC--CCCc-chhhHH-HHHHHHHHHHH
Confidence            367899999999988   21  22111  12222344555555544421 01111  1222 223343 44445556888


Q ss_pred             HHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155          108 SDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA  168 (206)
Q Consensus       108 ~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~  168 (206)
                      .+.++.++++++++..+++..+.+|+++++.++++++|+++..+++|.++++.|+.++..+
T Consensus        76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999999999999999999999999999999987643

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.75  E-value=2e-07  Score=81.90  Aligned_cols=127  Identities=12%  Similarity=0.114  Sum_probs=91.9

Q ss_pred             chhHHHHHHHHHHHHHhc---C---CCccchHHHH-HHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHH
Q 039155           30 LVGDLFALLSAMTYGLFT---G---RRKLDMQKLV-GCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGF  102 (206)
Q Consensus        30 ~lGd~LaLlsA~~yAlY~---~---~~~~~~~~~~-g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl  102 (206)
                      ..|.+++++|+++|+.|.   +   .+..+..... ..+.+.+++++.|.      ....+   ++ ....|..++ .|+
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------~~~~~---~~-~~~~~~~~~-~Gi  219 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAFGVDGLSVLLPQAIGMVIGGIIFNLGH------ILAKP---LK-KYAILLNIL-PGL  219 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcCCCcceehhHHHHHHHHHHHHHHHHH------hcccc---hH-HHHHHHHHH-HHH
Confidence            569999999999999999   2   2223322112 11222333333221      00021   11 223454444 888


Q ss_pred             HHHHHHHHHHHHHhh-hhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHH----HHHHHHHHHhhheecc
Q 039155          103 VGNFVSDYFWALGVV-RTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYI----IGSVQNSSQNRWIDIA  168 (206)
Q Consensus       103 ~~svl~~~l~~~al~-~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~i----iG~~LIl~G~~l~~~~  168 (206)
                      + ..+++.++..+.+ +.++..+++.-.++|+.+.+.+++++||+.++.++    +|.++|+.|..+....
T Consensus       220 ~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       220 M-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG  289 (290)
T ss_pred             H-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence            8 7999999999999 99999999999999999999999999999999999    9999999999887543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.71  E-value=1.4e-07  Score=74.10  Aligned_cols=74  Identities=18%  Similarity=0.140  Sum_probs=67.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHH--HcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155           97 IIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMF--IHHQHYSPIYIIGSVQNSSQNRWIDIAEF  170 (206)
Q Consensus        97 ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i--~~ge~ls~~~iiG~~LIl~G~~l~~~~~~  170 (206)
                      .+++|++|..+++++|++++++.+...+.-...+.+.+..+.++.  ++||++++.+++|.++|++|+++++++++
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            578899999999999999999999999999999988888888874  78999999999999999999999987654

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.69  E-value=2.6e-08  Score=86.46  Aligned_cols=152  Identities=13%  Similarity=0.161  Sum_probs=112.1

Q ss_pred             CeeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc--CC---CccchHHHHHHHHHHHHHHHHHHHHH
Q 039155            1 MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT--GR---RKLDMQKLVGCIGLFTLVALWWLVWP   75 (206)
Q Consensus         1 ~~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~--~~---~~~~~~~~~g~vgl~~~l~l~p~~~i   75 (206)
                      +.||+++..+|--.-|      .+.++|+..||.+++.+|-+||+-.  +|   ++.|...++|++|+|+.++...- ++
T Consensus       142 i~GvvmvV~sDV~agd------~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i  214 (336)
T KOG2766|consen  142 IVGVVMVVFSDVHAGD------RAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FI  214 (336)
T ss_pred             ecceEEEEEeeecccc------ccCCCCCccCcEEEEecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-Hh
Confidence            4688888888854322      2345789999999999999999876  22   56778889999999999998655 33


Q ss_pred             hhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHH
Q 039155           76 LTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGS  155 (206)
Q Consensus        76 l~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~  155 (206)
                      ....+.. ..+|-  ++...++. .++ |-++-+.+...-+|..|+|...++++..-.-+.++  -.+|-+.++.+++..
T Consensus       215 ~~~~~~~-tl~w~--~~i~~yl~-f~L-~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF  287 (336)
T KOG2766|consen  215 FERHHVS-TLHWD--SAIFLYLR-FAL-TMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAF  287 (336)
T ss_pred             hhcccee-eEeeh--HHHHHHHH-HHH-HHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHH
Confidence            2223333 24332  23333333 333 45667777789999999999999998888778887  555888999999999


Q ss_pred             HHHHHHhhhee
Q 039155          156 VQNSSQNRWID  166 (206)
Q Consensus       156 ~LIl~G~~l~~  166 (206)
                      +.+..|+++-.
T Consensus       288 ~~i~~GliiYs  298 (336)
T KOG2766|consen  288 ATIATGLIIYS  298 (336)
T ss_pred             HHHHHhhEEee
Confidence            99999998864

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.64  E-value=1e-06  Score=77.13  Aligned_cols=136  Identities=10%  Similarity=0.016  Sum_probs=97.2

Q ss_pred             CCchhHHHHHHHHHHHHHhc---C-CCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccC-CCCHHHHHHHHHHHH
Q 039155           28 HYLVGDLFALLSAMTYGLFT---G-RRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAF-PHSAKTAEIIIANGF  102 (206)
Q Consensus        28 ~~~lGd~LaLlsA~~yAlY~---~-~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~-P~~~~~w~~ll~lgl  102 (206)
                      +...|++++++++++|+..-   + .++++......+-.+++.+++.|.....  -+.+ .... ..+++.+. ....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~~~~~~~~~~~~R~~~a~~~l~~~~~~~--~~~~-~~~~~~~~~~~~~-~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSIC--RQWS-YLKTLIQTPQKIF-MLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH--ccHH-HHHHHHcCHHHHH-HHHHHH
Confidence            34689999999999999866   1 2335544444455555666555444321  1111 0000 01223333 233555


Q ss_pred             HHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155          103 VGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI  167 (206)
Q Consensus       103 ~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~  167 (206)
                      ++....+.++.+|++++++..+++..++.|++.++.++++++|+++..+++|.++.++|+.++..
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~  145 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW  145 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence            56778899999999999999999999999999999999999999999999999999999998753

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.53  E-value=9e-07  Score=67.09  Aligned_cols=77  Identities=14%  Similarity=0.095  Sum_probs=67.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155           93 TAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF  170 (206)
Q Consensus        93 ~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~  170 (206)
                      .|..++..|+++...++.++.+|+++.++ .+++...+.|+++++.++++++|+++...++|.+++++|+.++..++.
T Consensus        33 ~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   33 PWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            44445666676666889999999999995 777999999999999999999999999999999999999999987654

>TIGR00688 rarD rarD protein

Probab=98.49  E-value=5.1e-06  Score=70.90  Aligned_cols=133  Identities=12%  Similarity=0.107  Sum_probs=94.5

Q ss_pred             hhHHHHHHHHHHHHHhc---CC-CccchHHHHHHHHHHHHHHHHHHHHHhhhcCC----CCcccCCCCHHHHHHHHHHHH
Q 039155           31 VGDLFALLSAMTYGLFT---GR-RKLDMQKLVGCIGLFTLVALWWLVWPLTAMGI----EPKFAFPHSAKTAEIIIANGF  102 (206)
Q Consensus        31 lGd~LaLlsA~~yAlY~---~~-~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~----e~~~~~P~~~~~w~~ll~lgl  102 (206)
                      .|.+++++++++|+.--   +. +.++......+=++++.+++.+.....  ...    + ....++..+.+..+...|+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~~~~~~~~i~~~R~~~a~~~l~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLLKPLPATDILGHRMIWSFPFMLLSVTLF--RQWAALIE-RLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH--cchHHHHH-HHhCcccchHHHHHHHHHH
Confidence            48899999999999765   21 235544444455566666654433221  111    1 1111111122344555555


Q ss_pred             HHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155          103 VGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI  167 (206)
Q Consensus       103 ~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~  167 (206)
                      + ...++.++.+|++++++..+++...+.|.++++.++++++|+++..+++|.++.++|+.++..
T Consensus        79 ~-~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        79 L-IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             H-HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            4 678889999999999999999999999999999999999999999999999999999987754

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.36  E-value=5.6e-06  Score=63.25  Aligned_cols=70  Identities=14%  Similarity=0.051  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155           98 IANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI  167 (206)
Q Consensus        98 l~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~  167 (206)
                      ...++++-.++.++|.++++..+...+.....+.+..+++.+++++||++++.+++|.++|++|+.++..
T Consensus        40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3444566788999999999999999999999999999999999999999999999999999999987653

>TIGR00688 rarD rarD protein

Probab=98.35  E-value=1e-05  Score=69.04  Aligned_cols=50  Identities=12%  Similarity=0.092  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHH
Q 039155           92 KTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFI  142 (206)
Q Consensus        92 ~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~  142 (206)
                      ..|..++..|++ +.+++.+|++++++.+|+.+++..+++|+++.+.++++
T Consensus       206 ~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       206 PIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             hHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            478888888886 89999999999999999999999999999999998764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.29  E-value=2.6e-05  Score=66.00  Aligned_cols=77  Identities=14%  Similarity=0.013  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155           92 KTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA  168 (206)
Q Consensus        92 ~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~  168 (206)
                      +.|...+..|.++..+.+.++.+|++++++..+++...++|.++++.++++++|+++..+++|.++.++|+.++..+
T Consensus        44 ~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~  120 (260)
T TIGR00950        44 KRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSD  120 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccC
Confidence            45556777777788899999999999999999999999999999999999999999999999999999999887643

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.28  E-value=2.3e-05  Score=71.12  Aligned_cols=127  Identities=14%  Similarity=0.130  Sum_probs=89.5

Q ss_pred             HHHHHHHHHHHHhc------CCCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCC-CHHHHHHHHHHHHHHHH
Q 039155           34 LFALLSAMTYGLFT------GRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPH-SAKTAEIIIANGFVGNF  106 (206)
Q Consensus        34 ~LaLlsA~~yAlY~------~~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~-~~~~w~~ll~lgl~~sv  106 (206)
                      +.++..=++|+.+.      -+.-++...+..+-..++.++++|+....     +.....|. +++.|..+...|++. .
T Consensus        16 ~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~-----~~~~~~~~~~~~~~~~l~l~g~~g-~   89 (358)
T PLN00411         16 TAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFT-----NRSRSLPPLSVSILSKIGLLGFLG-S   89 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHH-----HHhcccCcchHHHHHHHHHHHHHH-H
Confidence            34444556666665      11223322334444556666666665541     10011232 345677777788875 5


Q ss_pred             HHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHH------cCcCccHHHHHHHHHHHHHhhhee
Q 039155          107 VSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFI------HHQHYSPIYIIGSVQNSSQNRWID  166 (206)
Q Consensus       107 l~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~------~ge~ls~~~iiG~~LIl~G~~l~~  166 (206)
                      +.+.++++++++++|+.+++..++.|.++++.++++      ++|+++..+++|.++-++|+.++.
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~  155 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI  155 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence            666789999999999999999999999999999999      699999999999999999998765

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.10  E-value=9.3e-05  Score=64.68  Aligned_cols=75  Identities=4%  Similarity=0.041  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155           91 AKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWID  166 (206)
Q Consensus        91 ~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~  166 (206)
                      .+.|..++..|++ ..+.+.+++++++++++..+++...++|+++++.++++++|+++..+++|.+++++|+.+..
T Consensus        62 ~~~~~~~~~~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        62 SALLKLLLPVAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            4678888888887 57788999999999999999999999999999999999999999999999999999998765

specificities overlap.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=98.09  E-value=8e-05  Score=64.25  Aligned_cols=153  Identities=15%  Similarity=0.158  Sum_probs=92.5

Q ss_pred             eeEEEEEEcCCCCCCCCCCcc---ccCCCCCchhHHHHHHHHHHHH---Hhc----CCCccchHHHHHHHHHHHHHHHHH
Q 039155            2 AGVAMTTIGKTWTADEPQSSI---SKNRKHYLVGDLFALLSAMTYG---LFT----GRRKLDMQKLVGCIGLFTLVALWW   71 (206)
Q Consensus         2 ~Gv~lit~~~~~~~~~~~~~~---~~~~~~~~lGd~LaLlsA~~yA---lY~----~~~~~~~~~~~g~vgl~~~l~l~p   71 (206)
                      .|++++..++...+|.++++.   +....++..|.+++++++++-|   +|.    ++++.+....-...++++.++..+
T Consensus        82 ~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~  161 (244)
T PF04142_consen   82 AGVVLVQLSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLL  161 (244)
T ss_pred             HHHheeecCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Confidence            577777777654422221111   1234567899999998877655   566    333344322222334444444433


Q ss_pred             HHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHH
Q 039155           72 LVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIY  151 (206)
Q Consensus        72 ~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~  151 (206)
                      ....-+.....+ ..+-   +.|-.....-++.+.++..+....+|+.+...=+....+++.++++..+++++.+++...
T Consensus       162 ~~~~~~~~~~~~-~g~f---~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f  237 (244)
T PF04142_consen  162 ALLLSDGSAISE-SGFF---HGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSF  237 (244)
T ss_pred             HHhccccccccc-CCch---hhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHH
Confidence            333222211111 1111   112222222333456677777889999999999999999999999999999999999999


Q ss_pred             HHHHHHH
Q 039155          152 IIGSVQN  158 (206)
Q Consensus       152 iiG~~LI  158 (206)
                      ++|+.+|
T Consensus       238 ~lg~~~V  244 (244)
T PF04142_consen  238 LLGAALV  244 (244)
T ss_pred             hhheecC
Confidence            9998764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.03  E-value=0.00039  Score=58.66  Aligned_cols=77  Identities=17%  Similarity=0.126  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHH-HHcCcCccHHHHHHHHHHHHHhhheeccccch
Q 039155           96 IIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDM-FIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKT  172 (206)
Q Consensus        96 ~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~-i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~  172 (206)
                      ..+..+.++....++++..+++++++..+++...+.|.++.+.++ ++++|+++...+.|..+.+.|+.++..+....
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~  148 (292)
T COG0697          71 LLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG  148 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc
Confidence            345555666788999999999999999999999999999999997 77799999999999999999999999776643

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.00  E-value=0.00018  Score=64.80  Aligned_cols=76  Identities=4%  Similarity=-0.012  Sum_probs=68.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155           92 KTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA  168 (206)
Q Consensus        92 ~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~  168 (206)
                      +.|..++..|++ ++..+...+.++++++++++++.-.++|+++++.++++++|+++...++|.+++++|+.++...
T Consensus       112 ~~~~~llp~gl~-~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~  187 (350)
T PTZ00343        112 LFLKNFLPQGLC-HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVK  187 (350)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecc
Confidence            467778888886 5666777889999999999999999999999999999999999999999999999999998754

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.99  E-value=0.00043  Score=60.41  Aligned_cols=123  Identities=9%  Similarity=-0.011  Sum_probs=88.2

Q ss_pred             HHHHHHHHHhc---C--CCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 039155           37 LLSAMTYGLFT---G--RRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYF  111 (206)
Q Consensus        37 LlsA~~yAlY~---~--~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l  111 (206)
                      ++-++.|+..-   +  .+..+...+..+=.+++.++++|....      + ....+ +.+.|......|++.....+.+
T Consensus        14 ~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~------~-~~~~~-~~~~~~~~~~~g~~~~~~~~~~   85 (292)
T PRK11272         14 FALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLL------R-GHPLP-TLRQWLNAALIGLLLLAVGNGM   85 (292)
T ss_pred             HHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH------h-CCCCC-cHHHHHHHHHHHHHHHHHHHHH
Confidence            34456666543   1  224554455555566666666655432      2 12222 2356776777887766677888


Q ss_pred             HHHHh-hhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155          112 WALGV-VRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA  168 (206)
Q Consensus       112 ~~~al-~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~  168 (206)
                      ..++. +.+++..+++...++|+++++.+++ ++|+++..+++|.++.++|++++..+
T Consensus        86 ~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~  142 (292)
T PRK11272         86 VTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG  142 (292)
T ss_pred             HHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC
Confidence            88998 9999999999999999999999986 59999999999999999999988643

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.80  E-value=0.00078  Score=58.98  Aligned_cols=72  Identities=10%  Similarity=-0.000  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhh-hchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155           97 IIANGFVGNFVSDYFWALGVVR-TSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA  168 (206)
Q Consensus        97 ll~lgl~~svl~~~l~~~al~~-tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~  168 (206)
                      ++..|++.....+.++..++++ .++..+++...+.|+++.+.++++++|+++..+++|.++.++|+.++..+
T Consensus        61 ~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~  133 (299)
T PRK11453         61 LLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED  133 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc
Confidence            3444543333344455678887 46789999999999999999999999999999999999999999988754

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.78  E-value=0.00085  Score=58.69  Aligned_cols=126  Identities=15%  Similarity=0.121  Sum_probs=79.8

Q ss_pred             hhHHHHHHHHHHHHHhc---C--CCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHH
Q 039155           31 VGDLFALLSAMTYGLFT---G--RRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGN  105 (206)
Q Consensus        31 lGd~LaLlsA~~yAlY~---~--~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~s  105 (206)
                      .+++++++++++|+..-   +  -+.++...+..+-..++.++++|..      ...   ..+.  +.|..++. +.+.-
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~------~~~---~~~~--~~~~~~~~-~~l~~   71 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTV------GFP---RLRQ--FPKRYLLA-GGLLF   71 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHc------ccc---cccc--ccHHHHHH-HhHHH
Confidence            46778899999999765   1  1224322333333344444444321      111   1111  11222222 22223


Q ss_pred             HHHHHHHHHHhh----hhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155          106 FVSDYFWALGVV----RTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA  168 (206)
Q Consensus       106 vl~~~l~~~al~----~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~  168 (206)
                      ...+.+...+++    .+++..+++..++.|+++.++++++++|+++..+++|.++-++|+.++..+
T Consensus        72 ~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~  138 (295)
T PRK11689         72 VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG  138 (295)
T ss_pred             HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence            344444555554    467788899999999999999999999999999999999999999988754

>TIGR00803 nst UDP-galactose transporter

Probab=97.68  E-value=0.00056  Score=57.30  Aligned_cols=60  Identities=13%  Similarity=0.086  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhh
Q 039155          105 NFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRW  164 (206)
Q Consensus       105 svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l  164 (206)
                      +.++..+..+.+++.+++..++...+++.++.+.+++++||+++..+++|+.+++.|.++
T Consensus       162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            344556678999999999999999999999999999999999999999999999998754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.64  E-value=0.0012  Score=59.71  Aligned_cols=76  Identities=16%  Similarity=0.163  Sum_probs=67.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155           94 AEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF  170 (206)
Q Consensus        94 w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~  170 (206)
                      |.--+.+|++ =+.++++.+.|.++|+-+.+.+.-...+|++++..++++++++++.+++|.++.++|+.++...+.
T Consensus        79 ~w~y~lla~~-Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~  154 (334)
T PF06027_consen   79 WWKYFLLALL-DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV  154 (334)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence            3334445775 589999999999999999999999999999999999999999999999999999999998876543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.59  E-value=0.00078  Score=51.54  Aligned_cols=67  Identities=18%  Similarity=0.060  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHHhhhhchHHH-HHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155          103 VGNFVSDYFWALGVVRTSPLVA-ALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE  169 (206)
Q Consensus       103 ~~svl~~~l~~~al~~tsp~~~-sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~  169 (206)
                      ++-.++++++..+++..+-..+ ++---+....+++.++++++|++++.+++|..+|++|+..++..+
T Consensus        38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3447788999999988774443 333446778889999999999999999999999999999998654

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.55  E-value=0.00076  Score=52.43  Aligned_cols=69  Identities=20%  Similarity=0.113  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHHhhhhchHHH-HHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155          102 FVGNFVSDYFWALGVVRTSPLVA-ALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF  170 (206)
Q Consensus       102 l~~svl~~~l~~~al~~tsp~~~-sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~  170 (206)
                      +.+-.++++++.++++..+-..+ ++--.+....+.+.++++++|++++.+++|..+|++|+..++..+.
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            33447789999999998775444 2323467788899999999999999999999999999999986554

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.45  E-value=0.0035  Score=55.46  Aligned_cols=133  Identities=17%  Similarity=0.172  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHHhc-CCCccchHHHHHHHHHHHHHHHHHHHHH-hhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 039155           35 FALLSAMTYGLFT-GRRKLDMQKLVGCIGLFTLVALWWLVWP-LTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFW  112 (206)
Q Consensus        35 LaLlsA~~yAlY~-~~~~~~~~~~~g~vgl~~~l~l~p~~~i-l~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~  112 (206)
                      .++.=|+.|+.|- -++++.+.-..|+  ..=++.+.|+.++ +-+.+-++.+..-.+...|..++..|++ |.+.-.++
T Consensus       152 val~la~sf~~Ygl~RK~~~v~a~~g~--~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~v-TavpL~lf  228 (293)
T COG2962         152 VALALALSFGLYGLLRKKLKVDALTGL--TLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLV-TAVPLLLF  228 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCchHHhH--HHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHH-HHHHHHHH
Confidence            4555678888888 2323322222221  1223333444332 2223333111111223578888999998 88999999


Q ss_pred             HHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155          113 ALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF  170 (206)
Q Consensus       113 ~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~  170 (206)
                      ..|-++++=...++.-+.+|-+-.+.+++++||+++..+.+..++|-.|..+...+..
T Consensus       229 ~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l  286 (293)
T COG2962         229 AAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGL  286 (293)
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999998876544

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.44  E-value=0.00044  Score=61.99  Aligned_cols=153  Identities=17%  Similarity=0.133  Sum_probs=107.9

Q ss_pred             eeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc---------CCCccchHHHHHHHHHHHHHHHH-H
Q 039155            2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT---------GRRKLDMQKLVGCIGLFTLVALW-W   71 (206)
Q Consensus         2 ~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~---------~~~~~~~~~~~g~vgl~~~l~l~-p   71 (206)
                      .||.+.+.+|..              -...|.+.+.+|-+..+...         ++++++-...+.+.+-+++..+. |
T Consensus       148 ~GV~ias~~e~~--------------fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P  213 (316)
T KOG1441|consen  148 FGVAIASVTELS--------------FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIP  213 (316)
T ss_pred             eeEEEeeecccc--------------ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcc
Confidence            477777775532              23799999999999999877         13445544455566666777776 5


Q ss_pred             HHHHhhhcCC---CCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCcc
Q 039155           72 LVWPLTAMGI---EPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYS  148 (206)
Q Consensus        72 ~~~il~~~g~---e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls  148 (206)
                      ......-...   + ..  |.... ....+++. +|.+.-|....+.+.+|||+.-+++..+==.+..+..|++++++.+
T Consensus       214 ~~~~~~~~~~~~~~-~~--~~~~~-~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt  288 (316)
T KOG1441|consen  214 FLDYVEGNKFVGFL-TA--PWFVT-FLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVT  288 (316)
T ss_pred             hHhhhcccceeeee-cc--ccchh-hHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCc
Confidence            5443111111   2 11  22222 33345555 5677777777889999999999999988888888999999999999


Q ss_pred             HHHHHHHHHHHHHhhheeccccchh
Q 039155          149 PIYIIGSVQNSSQNRWIDIAEFKTI  173 (206)
Q Consensus       149 ~~~iiG~~LIl~G~~l~~~~~~~~~  173 (206)
                      +.+..|.++-++|+.+=++.+.++.
T Consensus       289 ~~n~~G~~iai~Gv~~Y~~~k~~~~  313 (316)
T KOG1441|consen  289 FLNALGYAIAILGVFLYSRAKLKEK  313 (316)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhhh
Confidence            9999999999999999876655443

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.36  E-value=0.0028  Score=48.13  Aligned_cols=65  Identities=11%  Similarity=-0.004  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHhhhhchHH-HHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155          104 GNFVSDYFWALGVVRTSPLV-AALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA  168 (206)
Q Consensus       104 ~svl~~~l~~~al~~tsp~~-~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~  168 (206)
                      +-.+++++...+++..+-.. =++---+....+.++++++++|++++.+++|..+|+.|+..++..
T Consensus        38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            34778899999999887443 355556777889999999999999999999999999999998754

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.31  E-value=0.0032  Score=48.17  Aligned_cols=62  Identities=18%  Similarity=0.006  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHhhhhchHHH-HHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155          105 NFVSDYFWALGVVRTSPLVA-ALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWID  166 (206)
Q Consensus       105 svl~~~l~~~al~~tsp~~~-sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~  166 (206)
                      -.+++++...+++..+-..+ ++--.+....+.++++++++|++++.+++|..+|+.|+..++
T Consensus        45 ~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         45 VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            36788999999988774433 455557778889999999999999999999999999999875

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.29  E-value=0.013  Score=51.43  Aligned_cols=129  Identities=11%  Similarity=0.001  Sum_probs=83.3

Q ss_pred             hHHHHHHHHHHHHHhc---CC-CccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHH
Q 039155           32 GDLFALLSAMTYGLFT---GR-RKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFV  107 (206)
Q Consensus        32 Gd~LaLlsA~~yAlY~---~~-~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl  107 (206)
                      |.+++++++++|+..-   +. ...+.+...+  ..++.+++......   .. ++..+.   .+.|..-+..|++ =.+
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~g~~~~~~~~--~~~g~l~~~~~~~~---~~-~~~~~~---~~~~~~g~l~G~~-w~i   71 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIGGGPYSQTLG--TTFGALILSIAIAI---FV-LPEFWA---LSIFLVGLLSGAF-WAL   71 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccCCCHHHHHHH--HHHHHHHHHHHHHH---Hh-CCcccc---cHHHHHHHHHHHH-HHh
Confidence            6789999999999644   21 1233333332  12222222111111   11 211111   2344433344443 357


Q ss_pred             HHHHHHHHhhhhchHHHHHHHH-hHHHHHHHHHHHHcCcCccHHH----HHHHHHHHHHhhheecccc
Q 039155          108 SDYFWALGVVRTSPLVAALGVS-LTIPLAMLEDMFIHHQHYSPIY----IIGSVQNSSQNRWIDIAEF  170 (206)
Q Consensus       108 ~~~l~~~al~~tsp~~~sv~l~-L~ppla~i~d~i~~ge~ls~~~----iiG~~LIl~G~~l~~~~~~  170 (206)
                      ++.++..++++++-..+-.... +++.++.+.+.++++|+.+..+    ++|.+++++|..++...+.
T Consensus        72 g~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~  139 (290)
T TIGR00776        72 GQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKD  139 (290)
T ss_pred             hhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccc
Confidence            8899999999999887755555 8888999999999999999999    9999999999999876543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.26  E-value=0.0032  Score=47.96  Aligned_cols=65  Identities=15%  Similarity=0.080  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHhhhhchHH-HHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155          105 NFVSDYFWALGVVRTSPLV-AALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE  169 (206)
Q Consensus       105 svl~~~l~~~al~~tsp~~-~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~  169 (206)
                      -.+++++...|+|..+-.. =++---..+..++++++++++|++++..++|-.++++|+..++..+
T Consensus        40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            3678889999999877333 3555566778899999999999999999999999999999987653

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=97.22  E-value=0.0084  Score=54.29  Aligned_cols=135  Identities=13%  Similarity=0.198  Sum_probs=90.8

Q ss_pred             CCCCchhHHHHHHHHHH---HHHhc----CCCccc---hHHHHHHHH-HHHHHHHHHHHHHhhhcCCCC----cccCCCC
Q 039155           26 RKHYLVGDLFALLSAMT---YGLFT----GRRKLD---MQKLVGCIG-LFTLVALWWLVWPLTAMGIEP----KFAFPHS   90 (206)
Q Consensus        26 ~~~~~lGd~LaLlsA~~---yAlY~----~~~~~~---~~~~~g~vg-l~~~l~l~p~~~il~~~g~e~----~~~~P~~   90 (206)
                      ..++.+|-...+.+.+.   -++|.    .+++.+   .+.++.+.| +++++..+    .   .+.|.    .+..-.+
T Consensus       178 ~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~----~---~d~~~i~~~gff~G~s  250 (345)
T KOG2234|consen  178 AQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTIL----L---QDGEAINEYGFFYGYS  250 (345)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHh----h---ccccccccCCcccccc
Confidence            45677887766655443   34566    345555   245555555 33333321    1   23332    1222344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155           91 AKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF  170 (206)
Q Consensus        91 ~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~  170 (206)
                      +.+|..++.+|+.+     .+..+-+|+.+-..=+-.-.+.+.++.++.+.+++-.+|....+|..+|+.++.+=...++
T Consensus       251 ~~vw~vVl~~a~gG-----Llvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~  325 (345)
T KOG2234|consen  251 SIVWLVVLLNAVGG-----LLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPA  325 (345)
T ss_pred             HHHHHHHHHHhccc-----hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCc
Confidence            56787777776643     3444666888888888888899999999999999999999999999999999999886666


Q ss_pred             ch
Q 039155          171 KT  172 (206)
Q Consensus       171 ~~  172 (206)
                      ++
T Consensus       326 ~~  327 (345)
T KOG2234|consen  326 RD  327 (345)
T ss_pred             cc
Confidence            54

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.21  E-value=0.0049  Score=54.55  Aligned_cols=135  Identities=15%  Similarity=0.128  Sum_probs=92.4

Q ss_pred             CchhHHHHHHHHHHHHHhc---C-CCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHH
Q 039155           29 YLVGDLFALLSAMTYGLFT---G-RRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVG  104 (206)
Q Consensus        29 ~~lGd~LaLlsA~~yAlY~---~-~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~  104 (206)
                      .-.|.++++.+-+.|+.--   . -++++....++.--+.++.++..++...  -++....+.-...+.+..+...++. 
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRviwS~~~~l~ll~~~--r~~~~~~~~~~~p~~~~~~~l~a~l-   81 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRVIWSFPFMLALLFLL--RQWRELKQLLKQPKTLLMLALTALL-   81 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHhCcHHHHHHHHHHHH-
Confidence            4579999999999999633   1 1233333344444444444443222221  1111111111112456666666665 


Q ss_pred             HHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155          105 NFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWID  166 (206)
Q Consensus       105 svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~  166 (206)
                      -...+.++.||+..=....+|+|-++.|.++.+.+.++++|+++..+++..++-.+|+..-.
T Consensus        82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~  143 (293)
T COG2962          82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQT  143 (293)
T ss_pred             HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence            35688899999999999999999999999999999999999999999999999999997654

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=97.08  E-value=0.0089  Score=53.12  Aligned_cols=161  Identities=17%  Similarity=0.196  Sum_probs=103.3

Q ss_pred             eeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc--CC-----CccchHHHHHHHHHHHHHHHHHHHH
Q 039155            2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT--GR-----RKLDMQKLVGCIGLFTLVALWWLVW   74 (206)
Q Consensus         2 ~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~--~~-----~~~~~~~~~g~vgl~~~l~l~p~~~   74 (206)
                      .|++.+-+.|--.++++..|    .++...||++.+++-+.-|...  +|     .+++.....|+=|+++++++-.+.+
T Consensus       151 lGlviVg~~d~~~~~~p~~d----~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i  226 (372)
T KOG3912|consen  151 LGLVIVGSLDVHLVTDPYTD----YSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAI  226 (372)
T ss_pred             hhhheeeeeecccccCCccc----cccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHH
Confidence            46666666654333333222    4678999999999999999766  32     2233345678888999888766666


Q ss_pred             HhhhcCCCCccc-CCCC-HHHHHHH---------HHHHHHHHHHHHHHHHHH----hhhhchHHHHHHHHhHHHHHHHHH
Q 039155           75 PLTAMGIEPKFA-FPHS-AKTAEII---------IANGFVGNFVSDYFWALG----VVRTSPLVAALGVSLTIPLAMLED  139 (206)
Q Consensus        75 il~~~g~e~~~~-~P~~-~~~w~~l---------l~lgl~~svl~~~l~~~a----l~~tsp~~~sv~l~L~ppla~i~d  139 (206)
                      ..++......|. -|.. +.-|...         ++.++....++-.++|++    -|..|++.-.+.=.+--.+--++.
T Consensus       227 ~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~s  306 (372)
T KOG3912|consen  227 PMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFS  306 (372)
T ss_pred             HHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhH
Confidence            555544331122 1221 1222221         445555566666666643    455566666666666666667777


Q ss_pred             HHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155          140 MFIHHQHYSPIYIIGSVQNSSQNRWID  166 (206)
Q Consensus       140 ~i~~ge~ls~~~iiG~~LIl~G~~l~~  166 (206)
                      .....|++...++.|.++.+.|..+-+
T Consensus       307 i~m~~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  307 IAMGWEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            777889999999999999999998866

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.94  E-value=0.048  Score=47.88  Aligned_cols=76  Identities=11%  Similarity=-0.022  Sum_probs=65.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155           94 AEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF  170 (206)
Q Consensus        94 w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~  170 (206)
                      +...+..++ +..++..+-|.|+++.+...-.+.=...|+.+++++.++++++.+..++++.+++.+|+.+....+.
T Consensus        64 ~~~~~~~~~-~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~  139 (303)
T PF08449_consen   64 LKKYAILSF-LFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDS  139 (303)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccc
Confidence            333445555 3788889999999999988888888899999999999999999999999999999999999886644

; GO: 0055085 transmembrane transport

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.67  E-value=0.015  Score=51.14  Aligned_cols=143  Identities=16%  Similarity=0.195  Sum_probs=89.3

Q ss_pred             eeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc---CC---CccchHHHHHHHH-HHHHHHHHHHHH
Q 039155            2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT---GR---RKLDMQKLVGCIG-LFTLVALWWLVW   74 (206)
Q Consensus         2 ~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~---~~---~~~~~~~~~g~vg-l~~~l~l~p~~~   74 (206)
                      +|+++.++.|+..+++      ..+++..-|....++|.+.|..|.   +.   +..+.-+.. .+| +.+.++.     
T Consensus       115 iGv~lts~~~~~~~~~------~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~~~~~~~~~lPq-aiGm~i~a~i~-----  182 (269)
T PF06800_consen  115 IGVILTSYQDKKSDKS------SSKSNMKKGILALLISTIGYWIYSVIPKAFHVSGWSAFLPQ-AIGMLIGAFIF-----  182 (269)
T ss_pred             HHHHHhcccccccccc------ccccchhhHHHHHHHHHHHHHHHHHHHHhcCCChhHhHHHH-HHHHHHHHHHH-----
Confidence            4666777776542111      113445679999999999999999   22   223322222 222 1111111     


Q ss_pred             HhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHH----
Q 039155           75 PLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPI----  150 (206)
Q Consensus        75 il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~----  150 (206)
                        .....++ +..   .+.|..++.-.+.  .+++.++..+.+..+...+=..--+.++++.+.+.++++|+=+..    
T Consensus       183 --~~~~~~~-~~~---k~~~~nil~G~~w--~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~  254 (269)
T PF06800_consen  183 --NLFSKKP-FFE---KKSWKNILTGLIW--GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIY  254 (269)
T ss_pred             --hhccccc-ccc---cchHHhhHHHHHH--HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHH
Confidence              1111111 111   2355544443333  568888889999999888888888999999999999999987764    


Q ss_pred             HHHHHHHHHHHhhh
Q 039155          151 YIIGSVQNSSQNRW  164 (206)
Q Consensus       151 ~iiG~~LIl~G~~l  164 (206)
                      .++|.+||++|-.+
T Consensus       255 ~~~G~~Liv~G~il  268 (269)
T PF06800_consen  255 TLIGLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHHHHhhhc
Confidence            66788889888654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.65  E-value=0.0093  Score=43.92  Aligned_cols=55  Identities=25%  Similarity=0.179  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHHHhhhhchHHH-HHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHH
Q 039155          104 GNFVSDYFWALGVVRTSPLVA-ALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQN  158 (206)
Q Consensus       104 ~svl~~~l~~~al~~tsp~~~-sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LI  158 (206)
                      +-.++.+++.+|+++.+...+ ++.--+......+++++++||++++.+++|..+|
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            457788999999999887666 5555688899999999999999999999999886

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.36  E-value=0.033  Score=48.03  Aligned_cols=77  Identities=5%  Similarity=0.012  Sum_probs=67.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccch
Q 039155           95 EIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKT  172 (206)
Q Consensus        95 ~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~  172 (206)
                      .....=|++ -.+.+.+...++++++|..--+...+.+++++++.+++++++++..+|++-.++++|+.+...+....
T Consensus        18 ~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   18 LKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            334444554 56788899999999999999999999999999999999999999999999999999999998665543

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.10  E-value=0.011  Score=51.46  Aligned_cols=133  Identities=16%  Similarity=0.111  Sum_probs=90.1

Q ss_pred             CchhHHHHHHHHHHHHHhc-CC-------CccchHHHHHHHHHHHHHHHHHHHHHhhhcC--CCC-cccCCCCHHHHHHH
Q 039155           29 YLVGDLFALLSAMTYGLFT-GR-------RKLDMQKLVGCIGLFTLVALWWLVWPLTAMG--IEP-KFAFPHSAKTAEII   97 (206)
Q Consensus        29 ~~lGd~LaLlsA~~yAlY~-~~-------~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g--~e~-~~~~P~~~~~w~~l   97 (206)
                      ..+|.+|.++|-.+=++-- .+       ++-.. .++..+-+.+.+.+--.++   ++|  +|- .|..-++ ..|.-+
T Consensus       170 ~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~-~MM~~~NlwStL~Lg~g~l---fTGElweF~yF~~RhP-~~~~~l  244 (337)
T KOG1580|consen  170 FGFGELLLILSLAMDGLTGSIQDRIRASYQRTGT-SMMFYTNLWSTLYLGAGLL---FTGELWEFFYFVQRHP-YVFWDL  244 (337)
T ss_pred             cchHHHHHHHHHHhcccchhHHHHHHHhhccCch-hhHHHHHHHHHHHhhhhhe---ehhhHHHHHHHHHhcc-HHHHHH
Confidence            4578888888755544433 11       11222 2333444555554432222   222  220 0111122 356678


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155           98 IANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI  167 (206)
Q Consensus        98 l~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~  167 (206)
                      ..+|+ |+++++++...-+...+|..-|+.-..--.++.++.+++++.++++++|+|.++++.+...-..
T Consensus       245 ~l~ai-~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  245 TLLAI-ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HHHHH-HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            88888 6899999999999999999999988888889999999999999999999999999999877553

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=95.97  E-value=0.27  Score=42.87  Aligned_cols=123  Identities=9%  Similarity=-0.065  Sum_probs=81.4

Q ss_pred             CCchhHHHHHHHHHHHHHhc---C--CCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHH
Q 039155           28 HYLVGDLFALLSAMTYGLFT---G--RRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGF  102 (206)
Q Consensus        28 ~~~lGd~LaLlsA~~yAlY~---~--~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl  102 (206)
                      ++..|..+++++.++++.--   +  -+.++...+..+=.+++.+++++....      . ...++  .+.|...+..|+
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~------~-~~~~~--~~~~~~~~~~g~   79 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKP------W-RLRFA--KEQRLPLLFYGV   79 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhH------H-hccCC--HHHHHHHHHHHH
Confidence            45789999999999998544   1  122444444444455665555543211      1 01122  245555666666


Q ss_pred             HHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155          103 VGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWID  166 (206)
Q Consensus       103 ~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~  166 (206)
                      + ....+.++.++++++++..+++.....|.++++.+    +|++.  ...+..+.++|++++.
T Consensus        80 ~-~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--~~~~~~i~~~Gv~li~  136 (293)
T PRK10532         80 S-LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--DFVWVVLAVLGLWFLL  136 (293)
T ss_pred             H-HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--HHHHHHHHHHHHheee
Confidence            4 57778889999999999999999999999988766    35544  3556677889988865

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.74  E-value=0.049  Score=48.34  Aligned_cols=85  Identities=11%  Similarity=0.084  Sum_probs=67.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155           89 HSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA  168 (206)
Q Consensus        89 ~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~  168 (206)
                      ++++++++.+..++- +.++...-.--++..++..++..-..---++.+..++++.++++.++.-|+.+|..|+++=..+
T Consensus       255 hp~~tyGy~~~~s~~-gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ys  333 (367)
T KOG1582|consen  255 HPVRTYGYAFLFSLA-GYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYS  333 (367)
T ss_pred             CcHhHHHHHHHHHHH-hHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhccc
Confidence            445677777777663 6677776667778888888877777777888899999999999999999999999999997777


Q ss_pred             ccchhh
Q 039155          169 EFKTII  174 (206)
Q Consensus       169 ~~~~~~  174 (206)
                      +.++..
T Consensus       334 k~nk~~  339 (367)
T KOG1582|consen  334 KRNKIP  339 (367)
T ss_pred             CCCCCc
Confidence            644443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=95.55  E-value=0.0074  Score=53.31  Aligned_cols=80  Identities=13%  Similarity=0.034  Sum_probs=64.5

Q ss_pred             CCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhe
Q 039155           87 FPHSAKTAEII-IANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWI  165 (206)
Q Consensus        87 ~P~~~~~w~~l-l~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~  165 (206)
                      .|.....|+.+ ...|..    +-.+..||.++++-.-+++...++|.++.+++|++++|++|....+|..+-+.|+.++
T Consensus        92 gp~g~R~~LiLRg~mG~t----gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLI  167 (346)
T KOG4510|consen   92 GPEGKRKWLILRGFMGFT----GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLI  167 (346)
T ss_pred             cCCCcEEEEEeehhhhhh----HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEE
Confidence            34443455433 233433    4456678999999999999999999999999999999999999999999999999999


Q ss_pred             ecccc
Q 039155          166 DIAEF  170 (206)
Q Consensus       166 ~~~~~  170 (206)
                      .+++-
T Consensus       168 vRPpF  172 (346)
T KOG4510|consen  168 VRPPF  172 (346)
T ss_pred             ecCCc
Confidence            97743

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=95.31  E-value=0.0092  Score=52.83  Aligned_cols=145  Identities=14%  Similarity=0.153  Sum_probs=99.1

Q ss_pred             CchhHHHHHHHHHHHHHhc---C--CCcc-chH-HHHHHHHHHHHHHHHHHHHHhhhcCCCCcc-cCCCCHHHHHHHHHH
Q 039155           29 YLVGDLFALLSAMTYGLFT---G--RRKL-DMQ-KLVGCIGLFTLVALWWLVWPLTAMGIEPKF-AFPHSAKTAEIIIAN  100 (206)
Q Consensus        29 ~~lGd~LaLlsA~~yAlY~---~--~~~~-~~~-~~~g~vgl~~~l~l~p~~~il~~~g~e~~~-~~P~~~~~w~~ll~l  100 (206)
                      +..|.++..+|+++-|+..   .  +.++ +-. .+..+.-+.+++...|.+++.+-.+--..| .+| +++.|..+...
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~-a~~Fw~~mtLs  261 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLP-AIKFWILMTLS  261 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccch-HHHHHHHHHHH
Confidence            4689999888888877655   2  2222 222 334456688888888988886654421112 233 34678877777


Q ss_pred             HHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccchhhh
Q 039155          101 GFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTIIT  175 (206)
Q Consensus       101 gl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~~~~  175 (206)
                      |+++ +.-++.--+-+|-|||..-.+...----.-.+.|..+.+|..+..-|-|-++|++|=..-.+-++.++++
T Consensus       262 glfg-F~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~  335 (347)
T KOG1442|consen  262 GLFG-FAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRK  335 (347)
T ss_pred             HHHH-HHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHh
Confidence            7763 3333334567889999887777766666677888899999999999999999999987766655544443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.23  E-value=0.25  Score=44.24  Aligned_cols=79  Identities=11%  Similarity=-0.020  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccc
Q 039155           92 KTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFK  171 (206)
Q Consensus        92 ~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~  171 (206)
                      +.|.-++...+ |..+++.+..+-++..+|..-+..+..-=.++++...+.+|.+++..+++|..+|+.|+++=..-+.|
T Consensus       239 ~~~~Di~l~s~-~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  239 DVAFDILLYST-CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hHHHHHHHHHH-hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            35556677766 47889999999999999999999998999999999999999999999999999999999886655444

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.21  E-value=0.083  Score=40.69  Aligned_cols=60  Identities=13%  Similarity=0.060  Sum_probs=45.3

Q ss_pred             HHHHHHHHHHHhhhhchHHHH-HHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhh
Q 039155          105 NFVSDYFWALGVVRTSPLVAA-LGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRW  164 (206)
Q Consensus       105 svl~~~l~~~al~~tsp~~~s-v~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l  164 (206)
                      +..+..++.+.+...+=+.+. +..+++-.++++.++++.+|..+...++|.+||+.|+.+
T Consensus        51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            444556666666666633333 334677789999999998888899999999999999875

Many members are annotated as potential transmembrane proteins.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=95.00  E-value=0.67  Score=42.23  Aligned_cols=137  Identities=12%  Similarity=0.122  Sum_probs=71.0

Q ss_pred             CCchhHHHHHHHHHHHHHhc-CCCc---cchHHHHHHHHHHHHHHHHHHHHH-hhhcCCCCcccCCCCHHHHHHHHHHHH
Q 039155           28 HYLVGDLFALLSAMTYGLFT-GRRK---LDMQKLVGCIGLFTLVALWWLVWP-LTAMGIEPKFAFPHSAKTAEIIIANGF  102 (206)
Q Consensus        28 ~~~lGd~LaLlsA~~yAlY~-~~~~---~~~~~~~g~vgl~~~l~l~p~~~i-l~~~g~e~~~~~P~~~~~w~~ll~lgl  102 (206)
                      +..+|.+.++++++|++-+- ..+|   -+--.+--..|++.-++ .|...- +-...+...+...+ ...+..-+.-|+
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~~k~w~wE~~W~v~gi~~wl~-~~~~~g~~~~~~f~~~~~~~~-~~~~~~~~l~G~   81 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKKVKKWSWETMWSVGGIFSWLI-LPWLIAALLLPDFWAYYSSFS-GSTLLPVFLFGA   81 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccccCCCchhHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHHHhcC-HHHHHHHHHHHH
Confidence            46789999999999999876 2222   22112211222322222 221111 10111111122111 234443333444


Q ss_pred             HHHHHHHHHHHHHhhhhc-hHHHHHHHHhHHHHHHHHHHHHcCcCc---c----HHHHHHHHHHHHHhhheec
Q 039155          103 VGNFVSDYFWALGVVRTS-PLVAALGVSLTIPLAMLEDMFIHHQHY---S----PIYIIGSVQNSSQNRWIDI  167 (206)
Q Consensus       103 ~~svl~~~l~~~al~~ts-p~~~sv~l~L~ppla~i~d~i~~ge~l---s----~~~iiG~~LIl~G~~l~~~  167 (206)
                      + =.+++..+..++++.+ +.-..++.-++-+++.++..+++||-.   +    ..-++|.+++++|+.+..+
T Consensus        82 ~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         82 L-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             H-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            3 2345555555555554 223344444455556677888888643   2    3578899999999999886

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=94.75  E-value=0.073  Score=47.33  Aligned_cols=60  Identities=10%  Similarity=0.021  Sum_probs=51.7

Q ss_pred             HHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155          107 VSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWID  166 (206)
Q Consensus       107 l~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~  166 (206)
                      ++..+-..|....+.+.++-...++.+++++++..+++|+++...++|.+++++|..++.
T Consensus        62 ~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   62 LGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             cchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            344445567778888888877789999999999999999999999999999999998766

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=94.57  E-value=0.93  Score=40.86  Aligned_cols=144  Identities=19%  Similarity=0.173  Sum_probs=88.6

Q ss_pred             eeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHH---hc----CC------CccchHHHHHHHHHHHHHH
Q 039155            2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGL---FT----GR------RKLDMQKLVGCIGLFTLVA   68 (206)
Q Consensus         2 ~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAl---Y~----~~------~~~~~~~~~g~vgl~~~l~   68 (206)
                      +|++|.++-.++-              .+.|-.+.+.++++-|+   |.    ++      ..+++...+   .-.-.+.
T Consensus       149 ~Glflft~KsTqf--------------~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l---~p~M~~~  211 (349)
T KOG1443|consen  149 VGLFLFTYKSTQF--------------NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHL---QPWMSIG  211 (349)
T ss_pred             hheeEEEecccce--------------eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHh---hhHHHHH
Confidence            6889998876542              37899999999888775   22    11      123321111   1111112


Q ss_pred             HHHHHHHhhhcCCCC-----cccCCCCHHHHHHHHHHHHHHHHHHHHHH---HHHhhhhchHHHHHHHHhHHHHHHHHHH
Q 039155           69 LWWLVWPLTAMGIEP-----KFAFPHSAKTAEIIIANGFVGNFVSDYFW---ALGVVRTSPLVAALGVSLTIPLAMLEDM  140 (206)
Q Consensus        69 l~p~~~il~~~g~e~-----~~~~P~~~~~w~~ll~lgl~~svl~~~l~---~~al~~tsp~~~sv~l~L~ppla~i~d~  140 (206)
                      +.|.  .+++.|.+.     .+..-++...|..+-..++ |+.+++.+-   -.-+..|+....|+.--.-.+.+.+.+.
T Consensus       212 Ll~~--~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~  288 (349)
T KOG1443|consen  212 LLPL--SLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAI  288 (349)
T ss_pred             HHHH--HHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHH
Confidence            2222  233444331     1222232234444433333 244444333   2456788988889888888888999999


Q ss_pred             HHcCcCccHHHHHHHHHHHHHhhhe
Q 039155          141 FIHHQHYSPIYIIGSVQNSSQNRWI  165 (206)
Q Consensus       141 i~~ge~ls~~~iiG~~LIl~G~~l~  165 (206)
                      ++.++.+|..+++|..+.+.|+..=
T Consensus       289 ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  289 IILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHhhcchhhhHHHHHHHHHHHHHHh
Confidence            9999999999999999999999876

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=93.57  E-value=0.19  Score=45.24  Aligned_cols=91  Identities=12%  Similarity=0.114  Sum_probs=71.4

Q ss_pred             hcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHH
Q 039155           78 AMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQ  157 (206)
Q Consensus        78 ~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~L  157 (206)
                      .++..+ ..-+++...|.-++-+|++ ..+++++-|.++++.+-.++=..=.++||++.++.+++.+|+.+...+.--+.
T Consensus        68 ~l~~~~-~~~~~~~~~~~~llpl~~~-~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~p  145 (316)
T KOG1441|consen   68 VLKLVP-PSKISSKLPLRTLLPLGLV-FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLP  145 (316)
T ss_pred             HhcCCC-CCccccccchHHHHHHHHH-HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEE
Confidence            455553 3222233567778888886 78999999999999999999999999999999999999999998877766666


Q ss_pred             HHHHhhheecccc
Q 039155          158 NSSQNRWIDIAEF  170 (206)
Q Consensus       158 Il~G~~l~~~~~~  170 (206)
                      |..|+.++..++.
T Consensus       146 iv~GV~ias~~e~  158 (316)
T KOG1441|consen  146 IVFGVAIASVTEL  158 (316)
T ss_pred             eeeeEEEeeeccc
Confidence            7777766665433

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=93.55  E-value=0.26  Score=45.34  Aligned_cols=74  Identities=7%  Similarity=0.007  Sum_probs=65.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccch
Q 039155           98 IANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKT  172 (206)
Q Consensus        98 l~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~  172 (206)
                      ++.+.+ =+++++..|.|+++|+....++.-+..-.|+.+++.++.+|++|....++..+=++|++++...+.+.
T Consensus       163 l~fc~l-WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  163 LFFCPL-WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHH-HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            334443 46899999999999999999999999999999999999999999999999999999999999775544

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=93.01  E-value=0.17  Score=43.22  Aligned_cols=64  Identities=11%  Similarity=0.158  Sum_probs=59.0

Q ss_pred             HHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155          107 VSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF  170 (206)
Q Consensus       107 l~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~  170 (206)
                      .++|++..|+++.+|+.+|-...-.--+..+.+|+.+++++....++.+++-+.|+.+..+.++
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            4688999999999999999999999999999999999999999999999999999999885544

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=92.29  E-value=0.92  Score=39.97  Aligned_cols=82  Identities=6%  Similarity=-0.075  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHH-HHHHHhHHHHHHHHHHHHcCcCccHHH----HHHHHHHHHHhhhee
Q 039155           92 KTAEIIIANGFVGNFVSDYFWALGVVRTSPLVA-ALGVSLTIPLAMLEDMFIHHQHYSPIY----IIGSVQNSSQNRWID  166 (206)
Q Consensus        92 ~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~-sv~l~L~ppla~i~d~i~~ge~ls~~~----iiG~~LIl~G~~l~~  166 (206)
                      ..|..-+..|++ =.+++..+..+.++.+-+.+ =++--+|.+.+.+++.+++||--+..+    +++.++|++|+++..
T Consensus        43 ~~~~~~~lsG~~-W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts  121 (269)
T PF06800_consen   43 TSFIVAFLSGAF-WAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS  121 (269)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence            455555566664 35677777777776663322 233446778899999999999776543    447789999999999


Q ss_pred             ccccchhh
Q 039155          167 IAEFKTII  174 (206)
Q Consensus       167 ~~~~~~~~  174 (206)
                      +.++++-+
T Consensus       122 ~~~~~~~~  129 (269)
T PF06800_consen  122 YQDKKSDK  129 (269)
T ss_pred             cccccccc
Confidence            77765554

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=91.55  E-value=1.2  Score=39.65  Aligned_cols=70  Identities=19%  Similarity=0.236  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh----hhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155           92 KTAEIIIANGFVGNFVSDYFWALGVV----RTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWID  166 (206)
Q Consensus        92 ~~w~~ll~lgl~~svl~~~l~~~al~----~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~  166 (206)
                      ..|.+++.+-+     .++.=..++-    .+++..+++.+.+-=.++.++..+.+..++++..++|+.+|++|-.+-.
T Consensus       240 ~~~~yLl~n~L-----~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  240 SMWVYLLFNVL-----TQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA  313 (330)
T ss_pred             HHHHHHHHHHH-----HHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence            35666666544     4444444443    5566777788888888999999999999999999999999999987644

>PRK13499 rhamnose-proton symporter; Provisional

Probab=91.25  E-value=9.8  Score=34.72  Aligned_cols=61  Identities=13%  Similarity=0.178  Sum_probs=42.0

Q ss_pred             HHHHHHHHHhhhhchH-HHH---HHHHhHHHHHHHHHHHHcCcCcc------HHHHHHHHHHHHHhhheecc
Q 039155          107 VSDYFWALGVVRTSPL-VAA---LGVSLTIPLAMLEDMFIHHQHYS------PIYIIGSVQNSSQNRWIDIA  168 (206)
Q Consensus       107 l~~~l~~~al~~tsp~-~~s---v~l~L~ppla~i~d~i~~ge~ls------~~~iiG~~LIl~G~~l~~~~  168 (206)
                      ++++++.++-.+.+.. -.+   +.+.+.+.++.+-..+ ++|.=+      ..-++|.+++++|..++...
T Consensus       272 ~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        272 LQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             HHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            4455555555555322 222   5557788899999985 688766      56789999999999887654

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=90.80  E-value=6.8  Score=30.82  Aligned_cols=64  Identities=14%  Similarity=0.083  Sum_probs=47.3

Q ss_pred             HHHHHHHHHHHHHHHHhhhhchHHHHHHHH-hHHHHHHHHHHH----HcCcCccHHHHHHHHHHHHHhhh
Q 039155          100 NGFVGNFVSDYFWALGVVRTSPLVAALGVS-LTIPLAMLEDMF----IHHQHYSPIYIIGSVQNSSQNRW  164 (206)
Q Consensus       100 lgl~~svl~~~l~~~al~~tsp~~~sv~l~-L~ppla~i~d~i----~~ge~ls~~~iiG~~LIl~G~~l  164 (206)
                      -|++ .++.-++.++.+.+.++..+.+... =|...+.+.|..    ...+++++..++|.+++++|+.+
T Consensus        70 GG~l-G~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   70 GGLL-GVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             cHHH-HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            4444 3445556678889999777665554 456668899985    34578999999999999999864

>PF11742 DUF3302: Protein of unknown function (DUF3302); InterPro: IPR011223 This is a family of uncharacterised bacterial proteins, restricted to the Gammaproteobacteria

Probab=90.66  E-value=1.4  Score=31.71  Aligned_cols=57  Identities=23%  Similarity=0.468  Sum_probs=43.5

Q ss_pred             hhHHHHHHHHHHHHHhc----------CC--CccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCC
Q 039155           31 VGDLFALLSAMTYGLFT----------GR--RKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFP   88 (206)
Q Consensus        31 lGd~LaLlsA~~yAlY~----------~~--~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P   88 (206)
                      ++.++.+..++.|+...          ++  .+.+.....|++++++.-.+||+.++.-+...| ++.++
T Consensus         6 ~~vli~~~~~~~~~~~~lh~lP~~iA~kr~Hpq~eaI~v~gwisLft~~~lWp~a~IwA~~d~~-~~g~~   74 (78)
T PF11742_consen    6 LVVLIFVVIVLIYGFWKLHDLPGKIAHKRNHPQAEAIHVLGWISLFTLHVLWPFAWIWAYLDRP-DRGWG   74 (78)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-ccCCC
Confidence            56777788888888765          11  224566899999999998999999998888888 46554

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=89.11  E-value=0.19  Score=45.31  Aligned_cols=65  Identities=15%  Similarity=0.188  Sum_probs=49.4

Q ss_pred             chHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccchhhhhhhcccccC
Q 039155          120 SPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTIITTCVQQLWDC  184 (206)
Q Consensus       120 sp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~~~~~~~~~~~~~  184 (206)
                      +++.++-.-.++.+.+++.+..+++|+++....+|+++.++|=.++..-..++.+.+..+++|+-
T Consensus        89 PasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~  153 (335)
T KOG2922|consen   89 PASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWEL  153 (335)
T ss_pred             hHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHH
Confidence            44555555568899999999999999999999999999999988877554444444455555544

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=87.85  E-value=1.8  Score=38.48  Aligned_cols=81  Identities=9%  Similarity=0.066  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHH-HHHHHhHHHHHHHHHHHHcCcC--ccH----HHHHHHHHHHHHhhh
Q 039155           92 KTAEIIIANGFVGNFVSDYFWALGVVRTSPLVA-ALGVSLTIPLAMLEDMFIHHQH--YSP----IYIIGSVQNSSQNRW  164 (206)
Q Consensus        92 ~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~-sv~l~L~ppla~i~d~i~~ge~--ls~----~~iiG~~LIl~G~~l  164 (206)
                      .+|..++.. +.|.+.--...|.|+++-+++.+ -+....-...+.+.+.++++|.  .++    ....|...++.|+.+
T Consensus       211 ~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~l  289 (300)
T PF05653_consen  211 LTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFL  289 (300)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhhe
Confidence            567654444 44567777788999999987654 3444444556777788888864  444    467889999999999


Q ss_pred             eeccccchh
Q 039155          165 IDIAEFKTI  173 (206)
Q Consensus       165 ~~~~~~~~~  173 (206)
                      +...++++.
T Consensus       290 L~~~~~~~~  298 (300)
T PF05653_consen  290 LSSSKDKEI  298 (300)
T ss_pred             eeccCchhc
Confidence            987665443

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=85.77  E-value=11  Score=30.42  Aligned_cols=48  Identities=15%  Similarity=0.033  Sum_probs=36.2

Q ss_pred             hHHHHHHHHhHHHHHHHHHHHHcC----cCccHHHHHHHHHHHHHhhheecc
Q 039155          121 PLVAALGVSLTIPLAMLEDMFIHH----QHYSPIYIIGSVQNSSQNRWIDIA  168 (206)
Q Consensus       121 p~~~sv~l~L~ppla~i~d~i~~g----e~ls~~~iiG~~LIl~G~~l~~~~  168 (206)
                      .+.+.+...=|...++++|.+=..    .+++...++|.+++++|+++..+.
T Consensus        96 ~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          96 ATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            455566666677778888866443    679999999999999996666544

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=84.14  E-value=27  Score=31.92  Aligned_cols=137  Identities=15%  Similarity=0.138  Sum_probs=78.9

Q ss_pred             CCchhHHHHHHHHHHHHHhc-CCCcc---chHHHHHHHHHHHHHHHHHHHHHh-hhcCCCCc-ccCCCCHHHHHHHHHHH
Q 039155           28 HYLVGDLFALLSAMTYGLFT-GRRKL---DMQKLVGCIGLFTLVALWWLVWPL-TAMGIEPK-FAFPHSAKTAEIIIANG  101 (206)
Q Consensus        28 ~~~lGd~LaLlsA~~yAlY~-~~~~~---~~~~~~g~vgl~~~l~l~p~~~il-~~~g~e~~-~~~P~~~~~w~~ll~lg  101 (206)
                      +.++|.++..+++++-+.|- ..+|+   +--.+=..-|+++.++ .|.+.-. ...++... .+.|.  .++......|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~WsWEs~Wlv~gi~swli-~P~~~a~l~ip~~~~i~~~~~~--~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKGWSWESYWLVQGIFSWLI-VPWLWALLAIPDFFSIYSATPA--STLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCCccHHHHHHHHHHHHHHH-HHHHHHHHhCCcHHHHHHhCCh--hHHHHHHHHH
Confidence            45799999999999999766 33333   2111211223444443 3433321 11222211 22343  2333344444


Q ss_pred             HHHHHHHHHHHHHHhhhhc-hHHHHHHHHhHHHHHHHHHHHHcCc-------CccHHHHHHHHHHHHHhhheecc
Q 039155          102 FVGNFVSDYFWALGVVRTS-PLVAALGVSLTIPLAMLEDMFIHHQ-------HYSPIYIIGSVQNSSQNRWIDIA  168 (206)
Q Consensus       102 l~~svl~~~l~~~al~~ts-p~~~sv~l~L~ppla~i~d~i~~ge-------~ls~~~iiG~~LIl~G~~l~~~~  168 (206)
                      ++ =-++...+-.++|+++ +.-.++.+-+...+..++--++.|+       .-....++|.++.++|+.+.-+.
T Consensus        81 ~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   81 VL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            44 3467777788899988 5556666666666666665555443       22346789999999999998744

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=83.05  E-value=0.38  Score=42.17  Aligned_cols=145  Identities=14%  Similarity=0.128  Sum_probs=85.2

Q ss_pred             eeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc---CC---CccchHHHHHHHHHHHHHHHHHHHHH
Q 039155            2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT---GR---RKLDMQKLVGCIGLFTLVALWWLVWP   75 (206)
Q Consensus         2 ~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~---~~---~~~~~~~~~g~vgl~~~l~l~p~~~i   75 (206)
                      .|+.+.++.|..++++++      ++|--.|....+.|.+.|-+|.   +.   +-.+..+....=-+++.       ++
T Consensus       129 iG~~lTs~~~~~nk~~~~------~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~a-------li  195 (288)
T COG4975         129 IGIYLTSKQDRNNKEEEN------PSNLKKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGA-------LI  195 (288)
T ss_pred             HhheEeeeeccccccccC------hHhhhhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHH-------HH
Confidence            588899898877665542      2344578888899999999999   22   22232222211001111       22


Q ss_pred             hhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-hHHHHHHHHhHHHHHHHHHHHHcCcCccHH----
Q 039155           76 LTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTS-PLVAALGVSLTIPLAMLEDMFIHHQHYSPI----  150 (206)
Q Consensus        76 l~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~ts-p~~~sv~l~L~ppla~i~d~i~~ge~ls~~----  150 (206)
                      +...+.|.    +....+|..++ -|++ =.+++....+|.++.+ ++-=|++- +..+++.+-+.++++|+=|..    
T Consensus       196 ~~~~~~~~----~~~K~t~~nii-~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQ-lgViisTiGGIl~L~ekKtkkEm~~  268 (288)
T COG4975         196 LGFFKMEK----RFNKYTWLNII-PGLI-WAIGNLFMLLAAQKVGVATSFSLSQ-LGVIISTIGGILFLGEKKTKKEMVY  268 (288)
T ss_pred             Hhhccccc----chHHHHHHHHh-hHHH-HHhhHHHHHHhhhhhceeeeeeHhh-heeeeeecceEEEEeccCchhhhhh
Confidence            23344452    12335665443 3333 2456666666665444 22222322 566778899999999998875    


Q ss_pred             HHHHHHHHHHHhhhee
Q 039155          151 YIIGSVQNSSQNRWID  166 (206)
Q Consensus       151 ~iiG~~LIl~G~~l~~  166 (206)
                      -++|.+|+++|-.++.
T Consensus       269 v~iGiilivvgai~lg  284 (288)
T COG4975         269 VIIGIILIVVGAILLG  284 (288)
T ss_pred             hhhhHHHHHHHhhhhh
Confidence            4678888888876654

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=81.83  E-value=19  Score=31.52  Aligned_cols=59  Identities=15%  Similarity=0.220  Sum_probs=35.9

Q ss_pred             HHHHHHHHhhhhchHHHHHHHHhHHHH----HHHHHHHH-----cCc---C--ccHHHHHHHHHHHHHhhhee
Q 039155          108 SDYFWALGVVRTSPLVAALGVSLTIPL----AMLEDMFI-----HHQ---H--YSPIYIIGSVQNSSQNRWID  166 (206)
Q Consensus       108 ~~~l~~~al~~tsp~~~sv~l~L~ppl----a~i~d~i~-----~ge---~--ls~~~iiG~~LIl~G~~l~~  166 (206)
                      +..+|.-+=...=|..-.+++.+...+    +.+.+|..     +|+   .  -.+.+++|.+++++|..+-.
T Consensus        61 gG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~  133 (254)
T PF07857_consen   61 GGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFS  133 (254)
T ss_pred             hhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHhee
Confidence            333444433334455555566555555    66777764     232   2  35589999999999988755

The region concerned is approximately 280 residues long.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	206
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.77
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.58
3bo0_B	65	Preprotein translocase SECE subunit; ribosome-SECY	81.94

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.77  E-value=8.4e-09  Score=80.69  Aligned_cols=71  Identities=15%  Similarity=0.019  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhchHHHHHH-HHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155           99 ANGFVGNFVSDYFWALGVVRTSPLVAALG-VSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE  169 (206)
Q Consensus        99 ~lgl~~svl~~~l~~~al~~tsp~~~sv~-l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~  169 (206)
                      .++++++++++++|++++++.+++.+... ..++|++++++++++++|++++.+++|.++|++|+++++..+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            46777899999999999999999999887 799999999999999999999999999999999999998653

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.58  E-value=2.8e-07  Score=69.05  Aligned_cols=71  Identities=15%  Similarity=0.019  Sum_probs=64.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhchHHHHHH-HHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155           99 ANGFVGNFVSDYFWALGVVRTSPLVAALG-VSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE  169 (206)
Q Consensus        99 ~lgl~~svl~~~l~~~al~~tsp~~~sv~-l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~  169 (206)
                      ..++++..++++++.+++++.+...+... -.+.|.++++.+++++||++++.+++|.++|++|+++++..+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            45666789999999999999999998666 689999999999999999999999999999999999988654

>3bo0_B Preprotein translocase SECE subunit; ribosome-SECY complex, protein translocation; 9.60A {Escherichia coli} PDB: 3bo1_B 3kcr_B

Probab=81.94  E-value=0.47  Score=31.52  Aligned_cols=27  Identities=22%  Similarity=0.363  Sum_probs=20.3

Q ss_pred             chhhhhhhcccccCCCCCccchh---hhch
Q 039155          171 KTIITTCVQQLWDCSTYSWDSYI---AYTA  197 (206)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~  197 (206)
                      ++..++.++=.|+||+|+|+++.   .|+.
T Consensus        11 ~~~~~E~kkV~wptrKp~~~e~~~v~~~t~   40 (65)
T 3bo0_B           11 REARTEVRKVIWPTRKPTKDEYLAVAKVTA   40 (65)
T ss_dssp             HHHHHHHHHHSCTTTTTCTTHHHHHHHHHH
T ss_pred             HHHHHHHhheeccCCCCCHHHHHHHHHHHH
Confidence            34445556678999999999998   7664

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00