Citrus Sinensis ID: 039227

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650----
MSEEAIAKSCPFCCRNCNCNACLHNSEIVKVTRDLGAPAKTVENIGHFKYLLRLLYPFLRKFHHDQVKEKKIEAKIKGLELSEIEVPQVVLRSNERLFCNNFDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPSGKKSGIRFSSKKRMRKISQWKARENGDIPCPVNKLGGCGHEYLELKCIFANGWLSELKVKAKKLVKVHNLVDRPHHSGQSCSCFKLNGQIDCCSKSLRKAASREGVSDNYLYCPSATDVQHESLEHFKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVKINTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLSLNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFRTLPRNHRAKKDKLQ
ccHHHHHHHccccccccccHHHHccccccHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEcccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccEEcccccccccccHHHHHHHHHccccEEEEccccccccccccHHHHHHHHHccccccccccccEEEEcccccccccccHHHHHHHHcccccccccccEEEEccccccccHHHHHccccHHHHHHcccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccEEcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEcccccHHHHHHHHHHHHHHHccccccccccccccccccEEEEcHHHHHHHHHHHccccEEEEEccccEEEEcccccccccccccccEEEEcccccccHHHHHHHHHHHHcccccccccccccc
ccHHHHHHHccccccccccHHHEccccEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccccEEEccccccccccccccHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccccccccccccccccccccccEEEccccccccccHHccccccccEEHHHHccHcHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHHHccccEEEEcHHHccccccccHHHHHHHHHHccccccccccEEEEEEcccccEEEccHHHHHccccccccccccccEEEEEccccccHHHHHHccHHHHHHHHccccccccccccccEEEEEEcccccccccccccEEEEEccccccccccccccEEEcHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHHHHHccccccccccccHHHcccccccccccccccccccccccccccHHHHHcHccHHHHHHHHHHHHHHHcccccccccccccccccccEEccHHHHHHHHHHHccccEEEEEccccEEEEEcccccHHHccHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccHHHHcc
mseeaiakscpfccrncncnaclhnsEIVKVTrdlgapaktveniGHFKYLLRLLYPFLRKFHHDQVKEKKIEAKIKGlelseievPQVVLRSNerlfcnnfdyyrscprcsydlclTCCREIRDgclqggvnmytshfdrgkaylhggeslplpsgkksgirfssKKRMRKISQWkarengdipcpvnklggcgheyLELKCIFANGWLSELKVKAKKLVKvhnlvdrphhsgqscscfklngqidCCSKSLRKAasregvsdnylycpsatdvQHESLEHFKshwikgepviITNVLdyssglswepmvmsravrdtsyskgsqkLVVKTVDCLDLCEVKINTYQFFKAYmegrthsnswpvilklkdwppsclfeerlpchgaefmnilpykdythpysgilniatklppdflkpdlgpkayIAYGVAeelgrgdsvtklHCDMSDAVNVLMHTAKVDYSSKQVAEIEKLKRKHAIQDRREFfnplyardetfdmnhskseeklrpissmqsntlslngkdggalwdifrredvpKLGEYLRNHHkefrhvycspveqvvhpihdqtFYLNMYHKKklkeefgvepWSFVQQLGEavlipagcphqvrNLMSCTKIAldfvspeninECIRLTDefrtlprnhrakkdklq
mseeaiakSCPFCCRNCNCNACLHNSEIVKVTRDLGAPAKTVENIGHFKYLLRLLYPFLRKFHHDQVKEKKIEakikglelseievpqvvlRSNERLFCNNFDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLhggeslplpsgkksgirfsskKRMRKIsqwkarengdipcpVNKLGGCGHEYLELKCIFANGWLSELKVKAKKLVKVHNLvdrphhsgqscscfkLNGQIDCCSKSLRKAASREGVSDNYLYCPSATDVQHESLEHFKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRdtsyskgsqklvvktvdcldlCEVKINTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEKLkrkhaiqdrreffnplyardetfdMNHSKSEEKLRPISSMQSNTLslngkdggalwDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLtdefrtlprnhrakkdklq
MSEEAIAKSCPFCCRNCNCNACLHNSEIVKVTRDLGAPAKTVENIGHFKYLLRLLYPFLRKFHHDQVKEKKIEAKIKGLELSEIEVPQVVLRSNERLFCNNFDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPSGKKSGIRFSSKKRMRKISQWKARENGDIPCPVNKLGGCGHEYLELKCIFANGWlselkvkakklvkvhnlvDRPHHSGQSCSCFKLNGQIDCCSKSLRKAASREGVSDNYLYCPSATDVQHESLEHFKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVKINTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLSLNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFRTLPRNHRAKKDKLQ
******AKSCPFCCRNCNCNACLHNSEIVKVTRDLGAPAKTVENIGHFKYLLRLLYPFLRKFHHDQVKEKKIEAKIKGLELSEIEVPQVVLRSNERLFCNNFDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLH*******************************RENGDIPCPVNKLGGCGHEYLELKCIFANGWLSELKVKAKKLVKVHNLVDRPHHSGQSCSCFKLNGQIDCCSKSLRKAASREGVSDNYLYCPSATDVQHESLEHFKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVKINTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEKLKRKHAIQDRREFFNPLYA*********************************GGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFR**************
*SEEAIAKSCPFCCRNCNCNACLHN*******************IGHFKYLLRLLYPFLRKFHHDQVK************LSEIEVPQVVLRSNERLFCNNFDYYRSCPRCSYDLCLTCCREIRD***********SHFDRGKAY***********************************NG*I*CP***LGGCGHEYLELKCIFANGWL*ELKVKAKKLVKVHNLVDRPH****************************EGVSDNYLYCPSATDVQHESLEHFKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRD**********VVKTVDCLDLCEVKINTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKV*******************************************************************LWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFRTLPRNHR**KDKLQ
MSEEAIAKSCPFCCRNCNCNACLHNSEIVKVTRDLGAPAKTVENIGHFKYLLRLLYPFLRKFHHDQVKEKKIEAKIKGLELSEIEVPQVVLRSNERLFCNNFDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPSGKKSG*************QWKARENGDIPCPVNKLGGCGHEYLELKCIFANGWLSELKVKAKKLVKVHNLVDRPHHSGQSCSCFKLNGQIDCCSKSLRKAASREGVSDNYLYCPSATDVQHESLEHFKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRA*********SQKLVVKTVDCLDLCEVKINTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDM************SSMQSNTLSLNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFRTLPRN*********
MSEEAIAKSCPFCCRNCNCNACLHNSEIVKVTRDLGAPAKTVENIGHFKYLLRLLYPFLRKFHHDQVKEKKIEAKIKGLELSEIEVPQVVLRSNERLFCNNFDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGK***************************RKISQWKARENGDIPCPVNKLGGCGHEYLELKCIFANGWLSELKVKAKKLVKVHNLVDRP*****SCS*************SLRKAASREGVSDNYLYCPSATDVQHESLEHFKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVKINTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEKLKRKHAIQDRR****************************************DGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFRTLP***********
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MSEEAIAKSCPFCCRNCNCNACLHNSEIVKVTRDLGAPAKTVENIGHFKYLLRLLYPFLRKFHHDQVKEKKIEAKIKGLELSEIEVPQVVLRSNERLFCNNFDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPSGKKSGIRFSSKKRMRKISQWKARENGDIPCPVNKLGGCGHEYLELKCIFANGWLSELKVKAKKLVKVHNLVDRPHHSGQSCSCFKLNGQIDCCSKSLRKAASREGVSDNYLYCPSATDVQHESLEHFKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVKINTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLSLNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFRTLPRNHRAKKDKLQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query654 2.2.26 [Sep-21-2011]
Q7LBC61761 Lysine-specific demethyla yes no 0.496 0.184 0.349 4e-52
Q6ZPY71562 Lysine-specific demethyla no no 0.496 0.208 0.351 4e-52
Q5ZIX81325 Lysine-specific demethyla no no 0.524 0.258 0.352 7e-50
Q9Y4C11321 Lysine-specific demethyla no no 0.5 0.247 0.341 1e-48
Q6IRB81331 Lysine-specific demethyla N/A no 0.498 0.244 0.331 3e-48
Q636791214 Lysine-specific demethyla no no 0.487 0.262 0.332 7e-48
Q6PCM11323 Lysine-specific demethyla no no 0.487 0.241 0.332 7e-48
Q5HZN11334 Lysine-specific demethyla N/A no 0.493 0.242 0.334 1e-47
Q156522540 Probable JmjC domain-cont no no 0.5 0.128 0.301 1e-35
Q69ZK62350 Probable JmjC domain-cont no no 0.5 0.139 0.301 1e-34
>sp|Q7LBC6|KDM3B_HUMAN Lysine-specific demethylase 3B OS=Homo sapiens GN=KDM3B PE=1 SV=2 Back     alignment and function desciption
 Score =  206 bits (525), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/378 (34%), Positives = 192/378 (50%), Gaps = 53/378 (14%)

Query: 283  FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
            F+  W +G+PV+++ V        W+P   S+   D          +V   +C  + +VK
Sbjct: 1405 FRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGDQDVD------LVNCRNCAIISDVK 1458

Query: 343  INTY-QFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPY 401
            +  +   F+   +     +  P++LKLKDWPP   F + +P    + M  LP  +YT   
Sbjct: 1459 VRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-R 1517

Query: 402  SGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVD 461
             G LN+A++LP  F++PDLGPK Y AYG+     R    T LH D+SDAVNV++      
Sbjct: 1518 DGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMV------ 1571

Query: 462  YSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLSL- 520
            Y    + E                               +  EE L+ I    ++ ++  
Sbjct: 1572 YVGIPIGE------------------------------GAHDEEVLKTIDEGDADEVTKQ 1601

Query: 521  ---NGKDG-GALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMY 576
               +GK+  GALW I+  +D  K+ E LR   +E      +P +    PIHDQ++YL+  
Sbjct: 1602 RIHDGKEKPGALWHIYAAKDAEKIRELLRKVGEE--QGQENPPDH--DPIHDQSWYLDQT 1657

Query: 577  HKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLT 636
             +K+L EE+GV+ W+ VQ LG+AV IPAG PHQV NL SC K+A DFVSPE++  C RLT
Sbjct: 1658 LRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLT 1717

Query: 637  DEFRTLPRNHRAKKDKLQ 654
             EFR L   H   +DKLQ
Sbjct: 1718 QEFRHLSNTHTNHEDKLQ 1735
Histone demethylase that specifically demethylates 'Lys-9' of histone H3, thereby playing a central role in histone code. Demethylation of Lys residue generates formaldehyde and succinate. May have tumor suppressor activity.
Homo sapiens (taxid: 9606)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q6ZPY7|KDM3B_MOUSE Lysine-specific demethylase 3B OS=Mus musculus GN=Kdm3b PE=1 SV=2 Back     alignment and function description
>sp|Q5ZIX8|KDM3A_CHICK Lysine-specific demethylase 3A OS=Gallus gallus GN=KDM3A PE=2 SV=1 Back     alignment and function description
>sp|Q9Y4C1|KDM3A_HUMAN Lysine-specific demethylase 3A OS=Homo sapiens GN=KDM3A PE=1 SV=4 Back     alignment and function description
>sp|Q6IRB8|KD3AA_XENLA Lysine-specific demethylase 3A-A OS=Xenopus laevis GN=kdm3a-a PE=2 SV=1 Back     alignment and function description
>sp|Q63679|KDM3A_RAT Lysine-specific demethylase 3A OS=Rattus norvegicus GN=Kdm3a PE=2 SV=1 Back     alignment and function description
>sp|Q6PCM1|KDM3A_MOUSE Lysine-specific demethylase 3A OS=Mus musculus GN=Kdm3a PE=1 SV=1 Back     alignment and function description
>sp|Q5HZN1|KD3AB_XENLA Lysine-specific demethylase 3A-B OS=Xenopus laevis GN=kdm3a-b PE=2 SV=1 Back     alignment and function description
>sp|Q15652|JHD2C_HUMAN Probable JmjC domain-containing histone demethylation protein 2C OS=Homo sapiens GN=JMJD1C PE=1 SV=2 Back     alignment and function description
>sp|Q69ZK6|JHD2C_MOUSE Probable JmjC domain-containing histone demethylation protein 2C OS=Mus musculus GN=Jmjd1c PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query654
359476467 896 PREDICTED: uncharacterized protein LOC10 0.966 0.705 0.618 0.0
296083808 862 unnamed protein product [Vitis vinifera] 0.925 0.701 0.591 0.0
359484070 1199 PREDICTED: uncharacterized protein LOC10 0.984 0.537 0.547 0.0
296085310 1019 unnamed protein product [Vitis vinifera] 0.931 0.597 0.536 0.0
356573855 840 PREDICTED: lysine-specific demethylase 3 0.977 0.760 0.518 0.0
356573831 947 PREDICTED: uncharacterized protein LOC10 0.967 0.668 0.510 0.0
449464820 955 PREDICTED: uncharacterized protein LOC10 0.975 0.668 0.505 0.0
449522618 930 PREDICTED: LOW QUALITY PROTEIN: uncharac 0.975 0.686 0.503 0.0
356564476 843 PREDICTED: uncharacterized protein LOC10 0.960 0.744 0.499 0.0
356534442 1222 PREDICTED: uncharacterized protein LOC10 0.992 0.531 0.480 0.0
>gi|359476467|ref|XP_002264447.2| PREDICTED: uncharacterized protein LOC100244450 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  824 bits (2129), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/664 (61%), Positives = 500/664 (75%), Gaps = 32/664 (4%)

Query: 1   MSEEAIAKSCPFCCRNCNCNACLHNSEIVKVTRDLGAPAKTVENIGHFKYLLRLLYPFLR 60
           +S+EAIA++CPFC  NCNC ACL        T+ L       + I H KYL+++L PFL 
Sbjct: 210 VSKEAIAEACPFCSGNCNCKACLDRD-----TKTLEPEMSKDDKIKHSKYLVKVLLPFLE 264

Query: 61  KFHHDQVKEKKIEAKIKGLELSEIEVPQVVLRSNERLFCNN-----FDYYRSCPRCSYDL 115
           +F H+Q  E++IEAKI+GL   EI+V Q VLR +ER++CNN      D++R+CP CSYDL
Sbjct: 265 QFDHEQEMEREIEAKIQGLSPPEIQVQQAVLREDERVYCNNCRTSIVDFHRNCPNCSYDL 324

Query: 116 CLTCCREIRDGCLQGGVN-MYTSHFDRGKAYLHGGESLPLPSGKKSGIRF----SSKKRM 170
           CLTCCREIR+G LQGG++ +   +FDRGKAYLHGG+   +PS +K    F    SSK   
Sbjct: 325 CLTCCREIRNGSLQGGIDEIVMQYFDRGKAYLHGGKPH-MPSVQKGESNFCVSSSSKDPG 383

Query: 171 RKISQWKARENGDIPCPVNKLGGCGHEYLELKCIFANGWLSELKVKAKKLVKVHNLVDRP 230
             I +WK +ENGDIPC   ++GGCGH  L+LKC+F+  W+SELK KA+ LVK H L D  
Sbjct: 384 STICEWKVKENGDIPCAPKEMGGCGHGRLDLKCMFSETWVSELKEKAEGLVKTHKLTDVL 443

Query: 231 HHSGQSCSCFKLNGQIDCCSKSLRKAASREGVSDNYLYCPSATDVQHESLEHFKSHWIKG 290
                SCSCFKLN +ID  +K LRKAA+RE   DNYLYCPS +D+    L HF+SHW+KG
Sbjct: 444 GIPACSCSCFKLNSEIDFDNKKLRKAAAREDSFDNYLYCPSESDILQGDLVHFQSHWMKG 503

Query: 291 EPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVKINTYQFFK 350
           EPVI+++VL+++SGLSWEPMVM RA R  SY+K SQ L  K +DCLD CEV+IN +QFFK
Sbjct: 504 EPVIVSDVLEFTSGLSWEPMVMWRAFRKVSYTKSSQ-LAEKAIDCLDWCEVEINIHQFFK 562

Query: 351 AYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATK 410
            Y EGR H N WP +LKLKDWPPS LF+ERLP HGAEF++ LPY +YTHP SG+LN+A K
Sbjct: 563 GYSEGRAHRNLWPEMLKLKDWPPSNLFQERLPRHGAEFISSLPYLEYTHPRSGLLNLAAK 622

Query: 411 LPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEI 470
           LP   LKPDLGPK YIAYGV EELGRGDSVTKLHCDMSDAVNVLMHTA+V  SS+Q+A I
Sbjct: 623 LPQKSLKPDLGPKTYIAYGVVEELGRGDSVTKLHCDMSDAVNVLMHTAEVTLSSQQLAVI 682

Query: 471 EKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLSLNGKDGGALWD 530
           EKLK+ HA QD++E    L+A+ E F  +H  S  KL          +  + + GGA+WD
Sbjct: 683 EKLKKCHAAQDQKE----LFAQGE-FSDDHMASGNKL----------VGFDKEGGGAVWD 727

Query: 531 IFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPW 590
           IFRR+DVPKL EYLR HH+EFRH +CSPVEQVVHPIHDQTFYL ++HK+KLKEEFGVEPW
Sbjct: 728 IFRRQDVPKLQEYLRKHHREFRHTHCSPVEQVVHPIHDQTFYLTLHHKRKLKEEFGVEPW 787

Query: 591 SFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFRTLPRNHRAKK 650
           +FVQ+LGEAV IPAGCPHQVRNL SC K+ALDFVSPENI+EC+RLT+EFR LP NHRAK+
Sbjct: 788 TFVQKLGEAVFIPAGCPHQVRNLKSCIKVALDFVSPENIHECVRLTEEFRALPHNHRAKE 847

Query: 651 DKLQ 654
           DKL+
Sbjct: 848 DKLE 851

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296083808|emb|CBI24025.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359484070|ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261347 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296085310|emb|CBI29042.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356573855|ref|XP_003555071.1| PREDICTED: lysine-specific demethylase 3B-like [Glycine max] Back     alignment and taxonomy information
>gi|356573831|ref|XP_003555059.1| PREDICTED: uncharacterized protein LOC100780803 [Glycine max] Back     alignment and taxonomy information
>gi|449464820|ref|XP_004150127.1| PREDICTED: uncharacterized protein LOC101221956 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449522618|ref|XP_004168323.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101221956 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356564476|ref|XP_003550480.1| PREDICTED: uncharacterized protein LOC100806419 [Glycine max] Back     alignment and taxonomy information
>gi|356534442|ref|XP_003535763.1| PREDICTED: uncharacterized protein LOC100805723 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query654
TAIR|locus:2008875875 AT1G11950 "AT1G11950" [Arabido 0.711 0.531 0.454 1.4e-163
TAIR|locus:2125221840 AT4G00990 "AT4G00990" [Arabido 0.781 0.608 0.399 2e-147
TAIR|locus:2027109883 AT1G62310 "AT1G62310" [Arabido 0.639 0.473 0.570 7.9e-133
TAIR|locus:2036014944 AT1G09060 "AT1G09060" [Arabido 0.709 0.491 0.349 5.4e-94
TAIR|locus:2141221927 B160 "AT4G21430" [Arabidopsis 0.438 0.309 0.343 8.1e-78
UNIPROTKB|Q9Y4C11321 KDM3A "Lysine-specific demethy 0.227 0.112 0.436 6.1e-49
UNIPROTKB|E1BFC21320 KDM3A "Uncharacterized protein 0.227 0.112 0.436 2e-48
UNIPROTKB|F1SVC81323 KDM3A "Uncharacterized protein 0.227 0.112 0.436 2e-48
UNIPROTKB|E2QWU91322 KDM3A "Uncharacterized protein 0.227 0.112 0.436 2.6e-48
RGD|7083511214 Kdm3a "lysine (K)-specific dem 0.227 0.122 0.443 7e-48
TAIR|locus:2008875 AT1G11950 "AT1G11950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1058 (377.5 bits), Expect = 1.4e-163, Sum P(2) = 1.4e-163
 Identities = 223/491 (45%), Positives = 292/491 (59%)

Query:     1 MSEEAIAKSCPFCCRNCNCNACLHNSEIVKVTRDLGAPAKTVENIGHFKYLLRLLYPFLR 60
             +S + I + CPFC   CNC  CLH+S +++ ++         E   H ++L+  + PFL+
Sbjct:   227 LSTDDILEKCPFCRGTCNCCTCLHSSGLIETSK---RKLDKYERFYHLRFLIVAMLPFLK 283

Query:    61 KFHHDQVKEKKIEAKIKGLELSEIEVPQVVLRSNERLFCNN-----FDYYRSCPRCSYDL 115
             K    Q +E + EAK++    S++++ + +  + ER+FCN+      D +RSCP+CSY+L
Sbjct:   284 KLCKAQDQEIETEAKVQDSMASQVDISESLCSNEERVFCNHCATSIVDLHRSCPKCSYEL 343

Query:   116 CLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPSGKKSGIRFSSKKRMRKISQ 175
             CL CC+EIR G L            RG  Y+HG  + P  S        S  +      +
Sbjct:   344 CLNCCQEIRGGWLSDRPECQLQFEYRGTRYIHGEAAEPSSSS------VSEDETKTPSIK 397

Query:   176 WKARENGDIPCPVNKLGGCGHEYLELKCIFANGWXXXXXXXXXXXXXXXXXXDRPHHSGQ 235
             W A ENG I C   +LGGCG   LELK I    W                   +P  S  
Sbjct:   398 WNADENGSIRCAPKELGGCGDSVLELKRILPVTWMSDLEQKAETFLASYSI--KPPMS-- 453

Query:   236 SCSCFKLNGQIDCCSKSLRKAASREGVSDNYLYCPSATDV-QHESLEHFKSHWIKGEPVI 294
              C C       D  S   RKAASR+G SDNYLY P + DV + E L HF+ HW KGEPVI
Sbjct:   454 YCRCSS-----DMSSMK-RKAASRDGSSDNYLYSPDSLDVLKQEELLHFQEHWSKGEPVI 507

Query:   295 ITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLV-VKTVDCLDLCEVKINTYQFFKAYM 353
             + N L+ ++GLSWEPMVM RA+ +   S  S  +  VK +DCL  CEVKINT  FF+ Y 
Sbjct:   508 VRNALNNTAGLSWEPMVMWRALCENVDSAISSNMSDVKAIDCLANCEVKINTLCFFEGYS 567

Query:   354 EGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPP 413
             +GRT+ N WP +LKLKDWPPS  FE  LP H  EF++ LP+++Y+ P SGILNIATKLP 
Sbjct:   568 KGRTYENFWPEMLKLKDWPPSDKFENLLPRHCDEFISALPFQEYSDPRSGILNIATKLPE 627

Query:   414 DFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEKL 473
               LKPDLGPK Y+AYG ++ELGRGDSVTKLHCDMSDAVN+LMHTA+V  S +Q + I  L
Sbjct:   628 GLLKPDLGPKTYVAYGTSDELGRGDSVTKLHCDMSDAVNILMHTAEVTLSEEQRSAIADL 687

Query:   474 KRKHAIQDRRE 484
             K+KH  Q+ +E
Sbjct:   688 KQKHKQQNEKE 698
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA
TAIR|locus:2125221 AT4G00990 "AT4G00990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027109 AT1G62310 "AT1G62310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2036014 AT1G09060 "AT1G09060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141221 B160 "AT4G21430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y4C1 KDM3A "Lysine-specific demethylase 3A" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BFC2 KDM3A "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SVC8 KDM3A "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2QWU9 KDM3A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|708351 Kdm3a "lysine (K)-specific demethylase 3A" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query654
pfam02373114 pfam02373, JmjC, JmjC domain, hydroxylase 8e-14
smart0055858 smart00558, JmjC, A domain family that is part of 4e-08
>gnl|CDD|202224 pfam02373, JmjC, JmjC domain, hydroxylase Back     alignment and domain information 
 Score = 67.7 bits (166), Expect = 8e-14
 Identities = 23/99 (23%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 525 GGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEE 584
               +  F    V  +       + E      S       P         +   K+L E 
Sbjct: 21  YSINYLHFGGPKVWYIIPS---EYAEKFEKVLSKHNGGEQPDL-LLHLNTIISPKQLLEN 76

Query: 585 FGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDF 623
            G+  + FVQ+ GE V    G  HQV NL      A++F
Sbjct: 77  -GIPVYRFVQKPGEFVFTFPGWYHQVFNLGFNIAEAVNF 114

The JmjC domain belongs to the Cupin superfamily. JmjC-domain proteins may be protein hydroxylases that catalyze a novel histone modification. This is confirmed to be a hydroxylase: the human JmjC protein named Tyw5p unexpectedly acts in the biosynthesis of a hypermodified nucleoside, hydroxy-wybutosine, in tRNA-Phe by catalyzing hydroxylation. Length = 114
>gnl|CDD|214721 smart00558, JmjC, A domain family that is part of the cupin metalloenzyme superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 654
KOG1356889 consensus Putative transcription factor 5qNCA, con 100.0
PF02373114 JmjC: JmjC domain, hydroxylase; InterPro: IPR01312 99.58
PF13621251 Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XU 99.16
smart0055857 JmjC A domain family that is part of the cupin met 97.03
KOG2131427 consensus Uncharacterized conserved protein, conta 96.43
PF10497105 zf-4CXXC_R1: Zinc-finger domain of monoamine-oxida 95.08
PF0788371 Cupin_2: Cupin domain; InterPro: IPR013096 This fa 93.41
COG1917131 Uncharacterized conserved protein, contains double 93.31
KOG2130407 consensus Phosphatidylserine-specific receptor Ptd 92.79
COG0662127 {ManC} Mannose-6-phosphate isomerase [Carbohydrate 90.35
TIGR03214260 ura-cupin putative allantoin catabolism protein. T 87.99
COG4101142 Predicted mannose-6-phosphate isomerase [Carbohydr 83.41
PRK09943185 DNA-binding transcriptional repressor PuuR; Provis 83.4
PRK13290125 ectC L-ectoine synthase; Reviewed 82.48
TIGR00218302 manA mannose-6-phosphate isomerase, class I. The n 81.37
>KOG1356 consensus Putative transcription factor 5qNCA, contains JmjC domain [Transcription] Back     alignment and domain information 
Probab=100.00  E-value=6.5e-172  Score=1428.68  Aligned_cols=587  Identities=39%  Similarity=0.660  Sum_probs=526.2

Q ss_pred             CCHHHHHhhCcCCCCCcccccccCCCcccccccccCCC----CchhhHHHHHH--HHHHHHhhhhhhhcHHHhhhHhhhh
Q 039227            1 MSEEAIAKSCPFCCRNCNCNACLHNSEIVKVTRDLGAP----AKTVENIGHFK--YLLRLLYPFLRKFHHDQVKEKKIEA   74 (654)
Q Consensus         1 ls~eeI~~~CP~CrgnCNCk~CLr~~~~ik~~k~~~~e----~s~~~ki~~~~--yLL~~LLP~Lkqi~~EQ~~E~EiEA   74 (654)
                      ++.+|+|++|+||+.+|||.+|++..+++.+.+   ..    .+..+++.++.  |+|..++|+|+.++.+|-.+.+.||
T Consensus       265 ~~~~e~a~k~~~~~~~C~~~q~h~~~~Lm~Tq~---i~~~al~~~~~~~h~~r~k~~I~~~cpcl~~~~~~~~~~~~~e~  341 (889)
T KOG1356|consen  265 LSKEEVAEKCEFSWLKCNKGQCHALSELMPTQI---IPGSALLDLSDRVHAVREKFGIKAHCPCLKKQNKQQPLDAETEA  341 (889)
T ss_pred             chHhHhhhhhhHHHHhcCCccccchhhcccccc---cchhhhhhHHHHHHHHHHHhhHHhhChhHHhhhhhccccHHHHH
Confidence            468999999999999999999999999988776   44    67889999999  9999999999999999999999999


Q ss_pred             hhcccCCCcccccccccCCCccccccc-----ccccccCCCCCcchhhhhhHHhhhcccCCCCccccccccCCcccccCC
Q 039227           75 KIKGLELSEIEVPQVVLRSNERLFCNN-----FDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGG  149 (654)
Q Consensus        75 ki~g~~~sei~i~~a~~~~dErvyCdn-----~D~HRsC~~CsydLCL~CC~ElR~g~~~g~~~~~~~~~~rg~~y~~g~  149 (654)
                      +|||..+++ +++.+...++||+|||+     .|+||+||+|||.+||.||.+||+|.+.-..+..+.|.+||.+|+||-
T Consensus       342 ~vq~~~~~~-~~~~~~~~~~e~~~~~~~~~si~~l~r~cP~~s~~~~l~~~~~i~~g~l~~~~e~~~~~~~r~~~~~~g~  420 (889)
T KOG1356|consen  342 SVQGTEPTS-KPPVTQANPEEPLYCDHCATSIGDLKRSCPDSSYAICLPWLADLRRGDLKEKEECELMLRSRGVKYEHGP  420 (889)
T ss_pred             HHhcCCCCC-CccccccCcCCCccccccccchhhccccCCCccccccchHHHHhhcCCcccchhHHHHHHHHHHHhhcCc
Confidence            999999998 77777778899999999     799999999999999999999999988876666999999999999998


Q ss_pred             CCCCCCCCCCCCCcccchhcccccCcccccCCCCccCCCCCCCCCCCccccccccCcCChHHHHHHHHHHHHhhcccCCC
Q 039227          150 ESLPLPSGKKSGIRFSSKKRMRKISQWKARENGDIPCPVNKLGGCGHEYLELKCIFANGWLSELKVKAKKLVKVHNLVDR  229 (654)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~W~a~~dGsI~Cpp~e~ggCg~~~L~L~~if~~~~i~~L~~~ae~~~~~~~~~~~  229 (654)
                      +.........+     ...+    +.  +|++|+|.|-|...+||+...|+|||++|..|.+.|+.+||.-+..+-+   
T Consensus       421 ~~~~~~~~s~~-----~~~~----~~--~~~ng~~r~l~~~~~g~~~~~l~lkr~lpn~~~s~i~~~vE~k~~~~~~---  486 (889)
T KOG1356|consen  421 DPIEPSLSSVS-----VDEP----SS--ANENGSLRDLLLSLAGCLDRGLKLKRILPNILDSIIASVVENKLTSKLS---  486 (889)
T ss_pred             cccccccCCCC-----CCCC----cc--cccccchhhcccccCccchhhhhhhhcCchHHHHHHHHHHHhhcccccC---
Confidence            65533111111     1111    11  8999999999999999999999999999999999999999999988543   


Q ss_pred             CCCCCCcccccCCCCCcccccccccccccccCCCCCeeecCCccccccccHHHHHHHhhcCCCEEEecccccCCCCCCCh
Q 039227          230 PHHSGQSCSCFKLNGQIDCCSKSLRKAASREGVSDNYLYCPSATDVQHESLEHFKSHWIKGEPVIITNVLDYSSGLSWEP  309 (654)
Q Consensus       230 ~~~~~~~c~C~~~~~~~~~~~~~~r~aa~re~s~dn~ly~P~~~d~~~~~~~~FQ~hW~~GePViV~~v~~~~~~lsW~P  309 (654)
                       ..+...|.|..      ...+.++++|.|+.+.|||||||.+.+++.+|+.|||+||++|||||||||++++++++|+|
T Consensus       487 -~~~l~~~~~~~------~~~~~~~s~~~~~~~cdn~Ll~l~~d~~~~~n~~~FQEhWkqGqPViVs~V~~~l~g~lW~P  559 (889)
T KOG1356|consen  487 -KPPLRLCRSSQ------DGSGLLLSAASHSWLCDNRLLSLKVDPLNQNNLKHFQEHWKQGQPVIVSGVHKKLNGLLWKP  559 (889)
T ss_pred             -CchhhcCcccc------ccccCccccCCCCcCCCCceecCccCccchhHHHHHHHHHhcCCcEEehHhhhhccccccch
Confidence             33344444433      24567899999999999999999998899999999999999999999999999999999999


Q ss_pred             hHhHHHhhhccccC-CCccceeEEeeCCCCceeecchhHHHhhhccCcCCCCCCceeeecCCCCCchhhHhhccchhhHH
Q 039227          310 MVMSRAVRDTSYSK-GSQKLVVKTVDCLDLCEVKINTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEF  388 (654)
Q Consensus       310 ~~~~r~~~e~~~~~-~~~~~~v~~idCl~~~ev~i~~~~Ff~Gf~~gR~~~~~~p~~LKLKDWPps~~F~e~lP~h~~ef  388 (654)
                      |+|||+|+++.+.- ...+.++.++||++      ++.+||.||++||++++|||+|||||||||+++|+++||+||+||
T Consensus       560 ~a~~~~~g~q~~~l~n~~~~~i~s~d~~~------~fwegFe~~~kr~~~~~g~p~vLKLKDWpp~~~Fkd~lP~r~eel  633 (889)
T KOG1356|consen  560 EALSRAFGDQVVDLSNCNNSQIISNDCVD------NFWEGFEGYSKRLKSENGWPEVLKLKDWPPGEDFKDMLPRRFEEL  633 (889)
T ss_pred             HHHHHHhccchhhhhcCCCCCccccchhh------hHHHhhcccccCcccccCCeeEEeecCCCchHhHhhhhhHHHHHH
Confidence            99999999865433 44455566777766      688999999999999999999999999999999999999999999


Q ss_pred             hhcCCCcCccCCCCCcccccccCCCCCCCCCCCcchhhhcccccccCCCCCcccccccccccceeeeecccccCChhHHH
Q 039227          389 MNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVA  468 (654)
Q Consensus       389 i~~LP~~eYt~pr~G~LNLAs~LP~~~~kPDLGPK~YiAYG~~~elG~gdSvTkLH~DmSDAVNiL~h~aev~~~~~~~~  468 (654)
                      |++|||||||+ ++|+||||++||.+|++||||||||||||+++++|||||||||||||||||||||||++++.   +..
T Consensus       634 l~sLPlpEYt~-r~G~LNlAs~LP~~fv~PDLGPk~y~AYG~~~e~gr~~gtTnLH~dvSDaVNILvyv~e~~~---~~~  709 (889)
T KOG1356|consen  634 LASLPLPEYTD-RDGKLNLASKLPEGFVRPDLGPKLYNAYGVSTELGRGDGTTNLHLDVSDAVNILVYVGEPPG---QIE  709 (889)
T ss_pred             HHcCCchhhhc-CCCccchHhhCcccccCCCCCchhhhhccccccccCCCCceeeceehhhhhhheeeeccCCc---hHH
Confidence            99999999999 89999999999999999999999999999999999999999999999999999999999886   556


Q ss_pred             HHHHHHHHhhhhhhhhhcCCccccccccccCCCCCccccccCCCCcccccccCCCCCcceeeeecCCChhHHHHHHHHHH
Q 039227          469 EIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLSLNGKDGGALWDIFRREDVPKLGEYLRNHH  548 (654)
Q Consensus       469 ~i~~l~~~~~~q~~~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GAlWdIFrrqD~~KLreyL~kh~  548 (654)
                      .|+++++++.+++..|+...                            ++....+.+||||||||||||+|||+||+||+
T Consensus       710 ~~~~~~k~~~~~~~de~~~~----------------------------~~~~~~e~~GALWhIF~~~Dv~KireyL~k~~  761 (889)
T KOG1356|consen  710 QIAKVLKKIQEGDLDEITRS----------------------------RISSVSETPGALWHIFRAQDVPKIREYLRKVC  761 (889)
T ss_pred             hHHHHHHhhhhcchhhhhhh----------------------------hccccccCCcchhhhhhhcchHHHHHHHHHhh
Confidence            67788888877765554221                            12234578999999999999999999999999


Q ss_pred             hhhcccccCCCCcccCCcccCcceeCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccchhhccccCccC
Q 039227          549 KEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPEN  628 (654)
Q Consensus       549 ~Ef~~~~~~~~~~v~dPIhdQ~~YL~~~hr~rLkeEyGVepwtf~Q~~GeAVFIPAGcPHQVrNL~SCIKVA~DFVSPEn  628 (654)
                      +||+|    ++.+++||||||+||||.+||+|||||||||||||+|++|||||||||||||||||+||||||+|||||||
T Consensus       762 ~E~~~----~~~~v~hPIhDQS~YLd~~lr~RLkeEyGVe~WtfvQ~LGdAVfIPAGaPHQVrNLkSCikVa~DFVSPE~  837 (889)
T KOG1356|consen  762 KEQGH----EVPKVHHPIHDQSWYLDRYLRRRLKEEYGVEPWTFVQFLGDAVFIPAGAPHQVRNLKSCIKVAEDFVSPEH  837 (889)
T ss_pred             HHhcC----CCCcccCCCcccceeccHHHHHHHHHHhCCCccchhhcccceEEecCCCcHHhhhhhhHHHHHHhhCChhh
Confidence            99998    68899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHccCCchhccccccCC
Q 039227          629 INECIRLTDEFRTLPRNHRAKKDKLQ  654 (654)
Q Consensus       629 V~ec~~Lt~EfR~Lp~~h~~keDkLe  654 (654)
                      |.||+|||+|||+||++|.|||||||
T Consensus       838 v~ec~rLT~EfR~Lp~~h~~~eDKLq  863 (889)
T KOG1356|consen  838 VSECFRLTQEFRQLPQNHKNHEDKLQ  863 (889)
T ss_pred             HHHHHHHHHHHhhCCCcccchHHHHH
Confidence            99999999999999999999999997

>PF02373 JmjC: JmjC domain, hydroxylase; InterPro: IPR013129 Jumonji protein is required for neural tube formation in mice [] Back     alignment and domain information
>PF13621 Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XUM_A 2Y0I_A 1MZE_A 3KCY_A 1MZF_A 1YCI_A 2ILM_A 1H2L_A Back     alignment and domain information
>smart00558 JmjC A domain family that is part of the cupin metalloenzyme superfamily Back     alignment and domain information
>KOG2131 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms] Back     alignment and domain information
>PF10497 zf-4CXXC_R1: Zinc-finger domain of monoamine-oxidase A repressor R1; InterPro: IPR018866 R1 is a transcription factor repressor that inhibits monoamine oxidase A gene expression Back     alignment and domain information
>PF07883 Cupin_2: Cupin domain; InterPro: IPR013096 This family represents the conserved barrel domain of the cupin superfamily [] (cupa is the Latin term for a small barrel) Back     alignment and domain information
>COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown] Back     alignment and domain information
>KOG2130 consensus Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms] Back     alignment and domain information
>COG0662 {ManC} Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03214 ura-cupin putative allantoin catabolism protein Back     alignment and domain information
>COG4101 Predicted mannose-6-phosphate isomerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional Back     alignment and domain information
>PRK13290 ectC L-ectoine synthase; Reviewed Back     alignment and domain information
>TIGR00218 manA mannose-6-phosphate isomerase, class I Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query654
2ypd_A392 Crystal Structure Of The Jumonji Domain Of Human Ju 2e-37
>pdb|2YPD|A Chain A, Crystal Structure Of The Jumonji Domain Of Human Jumonji Domain Containing 1c Protein Length = 392 Back     alignment and structure 
Iteration: 1

 Score =  153 bits (387), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 179/375 (47%), Gaps = 48/375 (12%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
           FK  W +G+P +++ V    +   W+   +S    D              ++C D     
Sbjct: 27  FKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDHQ---------ADLLNCKDSIISN 77
Query: 343 INTYQFFKAYME---GRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTH 399
            N  +F+  + E    + + +   V+LKLKDWP    F+  +P    + +  LP  +Y +
Sbjct: 78  ANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCN 137
Query: 400 PYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAK 459
           P  G  N+A+ LP  F++PDLGP+   AYGV          T LH ++SD VN+L++   
Sbjct: 138 P-EGKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVYVG- 195
Query: 460 VDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLS 519
                  +A+   +  K  I  + E                   EE L  I   +   L 
Sbjct: 196 -------IAKGNGILSKAGILKKFE-------------------EEDLDDILRKR---LK 226
Query: 520 LNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKK 579
            + +  GALW I+  +DV K+ E+L+   KE + +   P      PI DQ++Y+N   ++
Sbjct: 227 DSSEIPGALWHIYAGKDVDKIREFLQKISKE-QGLEVLPEHD---PIRDQSWYVNKKLRQ 282
Query: 580 KLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEF 639
           +L EE+GV   + +Q LG+A+++PAG  HQV+N  SC ++  DFVSPE++ E   LT E 
Sbjct: 283 RLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQEL 342
Query: 640 RTLPRNHRAKKDKLQ 654
           R L +      DKLQ
Sbjct: 343 RLL-KEEINYDDKLQ 356

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query654
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-10
2xxz_A332 Lysine-specific demethylase 6B; oxidoreductase, hi 1e-05
3k2o_A336 Bifunctional arginine demethylase and lysyl-hydro 5e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 64.1 bits (155), Expect = 1e-10
 Identities = 90/665 (13%), Positives = 189/665 (28%), Gaps = 189/665 (28%)

Query: 44  NIGHFKYLLR-LLYPFLRKFHHDQVKEKKIEAKIKGL----ELSEI-EVPQVVLRSNERL 97
             G  +Y  + +L  F   F  +    K ++   K +    E+  I      V  +  RL
Sbjct: 10  ETGEHQYQYKDILSVFEDAFVDN-FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGT-LRL 67

Query: 98  F---CNN-----FDYYRSCPRCSYDLCLTCCREIRDGCLQGGVN--MYTSHFDRGKAYLH 147
           F    +        +     R +Y   ++    I+    Q  +   MY    DR    L+
Sbjct: 68  FWTLLSKQEEMVQKFVEEVLRINYKFLMS---PIKTEQRQPSMMTRMYIEQRDR----LY 120

Query: 148 GGESLPLPSGKKSGIRFSSKKRMRKISQWKARENGDIPCPVNKLGGCGHEYL-------- 199
                     K +  R     ++R+    + R   ++   ++ + G G  ++        
Sbjct: 121 NDNQ-VFA--KYNVSRLQPYLKLRQALL-ELRPAKNVL--IDGVLGSGKTWVALDVCLSY 174

Query: 200 ELKCIFANG--WLSELKVKAKKLVKVHNLVDRPHHSGQSCSCFKLNGQIDCCSKSLRKAA 257
           +++C       WL+     + + V +  L              KL  QID    S     
Sbjct: 175 KVQCKMDFKIFWLNLKNCNSPETV-LEMLQ-------------KLLYQIDPNWTSR---- 216

Query: 258 SREGVSDNYLYCPSATDVQHESLEHFKSHWIKGEP-----VIITNVLDYSSGLSWEPMVM 312
                SD+     S   ++  S++      +K +P     +++ NV              
Sbjct: 217 -----SDH----SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV--------QNAKAW 259

Query: 313 SRAVRDTSYSKGSQKLVVKTVDC--LDLCEVKINTYQFFKAYMEGRTHSNSWPVILKLKD 370
           +      +++   + L+  T      D       T+     +    T      ++LK  D
Sbjct: 260 N------AFNLSCKILLT-TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312

Query: 371 WPPSCLFEERLPCH-------GAEFMN-ILPYKDYTHPYSGILNIATKLPPDFLKPDLGP 422
             P  L  E L  +            + +  + ++ H     L    +   + L+P    
Sbjct: 313 CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR 372

Query: 423 KAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKV-----DYSSKQVAE--IEKLKR 475
           K +    V                   + ++      +         K      + KL +
Sbjct: 373 KMFDRLSV----------------FPPSAHI---PTILLSLIWFDVIKSDVMVVVNKLHK 413

Query: 476 KHAI-QDRREFFNPLYA--------RDETFDMNHSKSEEKLRPISSMQSNTLSLNGKDGG 526
              + +  +E    + +         +  + + H    +      +  S+ L     D  
Sbjct: 414 YSLVEKQPKESTISIPSIYLELKVKLENEYAL-HRSIVDHYNIPKTFDSDDLIPPYLDQ- 471

Query: 527 ALWDIFRREDVPKLGEYLRNH---H----------KEFRHVY----------------CS 557
                           Y  +H   H            FR V+                 +
Sbjct: 472 ----------------YFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWN 515

Query: 558 PVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPW-SFVQQLGEAVLIPAGCPHQVRNLMSC 616
               +++ +    FY         K E  V     F+ ++ E ++      +   +L+  
Sbjct: 516 ASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLIC---SKY--TDLL-- 568

Query: 617 TKIAL 621
            +IAL
Sbjct: 569 -RIAL 572
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens} Length = 332 Back     alignment and structure
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A* Length = 336 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query654
2ypd_A392 Probable JMJC domain-containing histone demethyla 100.0
4gjz_A235 Lysine-specific demethylase 8; JMJC, beta barrel, 99.33
3k2o_A336 Bifunctional arginine demethylase and lysyl-hydro 99.27
3al5_A338 HTYW5, JMJC domain-containing protein C2ORF60; tRN 99.06
3k3o_A371 PHF8, PHD finger protein 8; histone demethylase, c 99.0
2yu1_A 451 JMJC domain-containing histone demethylation PROT; 98.98
3kv4_A447 PHD finger protein 8; epigenetics, histone CODE, c 98.94
3kv5_D488 JMJC domain-containing histone demethylation prote 98.94
3d8c_A349 Hypoxia-inducible factor 1 alpha inhibitor; FIH, H 98.94
3kv9_A397 JMJC domain-containing histone demethylation prote 98.91
3pua_A392 GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe 98.82
3pur_A528 Lysine-specific demethylase 7 homolog; oxidoreduct 98.24
2xxz_A332 Lysine-specific demethylase 6B; oxidoreductase, hi 97.58
4ask_A 510 Lysine-specific demethylase 6B; oxidoreductase, KD 97.49
3avr_A 531 Lysine-specific demethylase 6A; cupin superfamily, 97.4
3dxt_A354 JMJC domain-containing histone demethylation PROT; 96.34
3opt_A373 DNA damage-responsive transcriptional repressor R; 95.59
2ox0_A381 JMJC domain-containing histone demethylation PROT; 95.35
4diq_A 489 Lysine-specific demethylase NO66; structural genom 94.25
2opk_A112 Hypothetical protein; putative mannose-6-phosphate 92.22
3lag_A98 Uncharacterized protein RPA4178; functionally unkn 91.75
1yhf_A115 Hypothetical protein SPY1581; structural genomics, 91.41
2pfw_A116 Cupin 2, conserved barrel domain protein; cupin do 91.39
3ht1_A145 REMF protein; cupin fold, Zn-binding, antibiotic b 91.17
3fjs_A114 Uncharacterized protein with RMLC-like cupin fold; 91.07
2q30_A110 Uncharacterized protein; double-stranded beta-heli 90.85
1vrb_A342 Putative asparaginyl hydroxylase; 2636534, structu 90.75
3h8u_A125 Uncharacterized conserved protein with double-STR 90.37
1v70_A105 Probable antibiotics synthesis protein; structural 90.2
2b8m_A117 Hypothetical protein MJ0764; structural genomics, 90.19
2fqp_A97 Hypothetical protein BP2299; double-stranded beta- 90.05
4e2g_A126 Cupin 2 conserved barrel domain protein; MCSG, PSI 89.72
1juh_A350 Quercetin 2,3-dioxygenase; cupin, glycoprotein, be 89.53
2ozj_A114 Cupin 2, conserved barrel; cupin superfamily prote 89.52
2xdv_A 442 MYC-induced nuclear antigen; ribosome biogenesis, 89.24
1o5u_A101 Novel thermotoga maritima enzyme TM1112; cupin, st 89.06
2xlg_A239 SLL1785 protein, CUCA; metal binding protein, cupi 89.01
3d82_A102 Cupin 2, conserved barrel domain protein; structur 88.91
2gu9_A113 Tetracenomycin polyketide synthesis protein; X-RAY 88.48
3kgz_A156 Cupin 2 conserved barrel domain protein; metallopr 88.43
2ozi_A98 Hypothetical protein RPA4178; APC6210, putative pr 88.03
3ibm_A167 Cupin 2, conserved barrel domain protein; cupin 2 88.01
3h7j_A243 Bacilysin biosynthesis protein BACB; YWFC, bacilys 87.04
1y9q_A192 Transcriptional regulator, HTH_3 family; transcrip 86.24
2i45_A107 Hypothetical protein; neisseria meningitidis cupin 85.76
1lr5_A163 Auxin binding protein 1; beta jellyroll, double st 85.18
3cew_A125 Uncharacterized cupin protein; all beta-protein, j 84.59
3l2h_A162 Putative sugar phosphate isomerase; AFE_0303, stru 84.47
2oa2_A148 BH2720 protein; 10175341, structural genomics, joi 84.12
3jzv_A166 Uncharacterized protein RRU_A2000; structural geno 83.73
4axo_A151 EUTQ, ethanolamine utilization protein; structural 83.63
3lwc_A119 Uncharacterized protein; structural genomics, unkn 83.55
1vj2_A126 Novel manganese-containing cupin TM1459; structura 83.28
4i4a_A128 Similar to unknown protein; structural genomics, P 83.09
2o8q_A134 Hypothetical protein; cpuin-like fold, structural 82.64
1x82_A190 Glucose-6-phosphate isomerase; cupin superfamily, 81.67
3bcw_A123 Uncharacterized protein; structural genomics, join 81.51
3rns_A227 Cupin 2 conserved barrel domain protein; structura 81.46
4h7l_A157 Uncharacterized protein; structural genomics, PSI- 80.89
1qwr_A319 Mannose-6-phosphate isomerase; structural genomics 80.51
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=1.4e-128  Score=1024.34  Aligned_cols=333  Identities=32%  Similarity=0.565  Sum_probs=276.0

Q ss_pred             cccHHHHHHHhhcCCCEEEecccccCCCCCCChhHhHHHhhhccccCCCccceeEEeeCCCCceeecchhHHHhhhccCc
Q 039227          277 HESLEHFKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVKINTYQFFKAYMEGR  356 (654)
Q Consensus       277 ~~~~~~FQ~hW~~GePViV~~v~~~~~~lsW~P~~~~r~~~e~~~~~~~~~~~v~~idCl~~~ev~i~~~~Ff~Gf~~gR  356 (654)
                      .+|++|||+||++|||||||||++++++++|+|++||++|++.         .+++|||++|++++|++++||+||++++
T Consensus        21 ~~n~~~Fq~hW~~GePViVs~V~~~~~~~~W~Pe~~~~~~gd~---------~~~lidC~~~~~~~i~v~~Ff~Gf~~~~   91 (392)
T 2ypd_A           21 SSNWKLFKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDH---------QADLLNCKDSIISNANVKEFWDGFEEVS   91 (392)
T ss_dssp             TTHHHHHHHHHTTTCCEEECCHHHHSCGGGGSHHHHHHHHTTS---------CCCCEETTTCCBCSCCHHHHHHTSSBGG
T ss_pred             cccHHHHHHHHhCCCcEEEechhhhCcCCccCHHHHHHHhcCc---------eeeeeeCCCCccccCcHHHHhhhccccc
Confidence            4799999999999999999999999999999999999999751         3678999999999999999999999875


Q ss_pred             C---CCCCCceeeecCCCCCchhhHhhccchhhHHhhcCCCcCccCCCCCcccccccCCCCCCCCCCCcchhhhcccccc
Q 039227          357 T---HSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEE  433 (654)
Q Consensus       357 ~---~~~~~p~~LKLKDWPps~~F~e~lP~h~~efi~~LP~~eYt~pr~G~LNLAs~LP~~~~kPDLGPK~YiAYG~~~e  433 (654)
                      .   .+++||+|||||||||+++|+++||+||+|||++||||||||| +|+|||||+||+++++||||||||||||++++
T Consensus        92 ~r~~~~~g~p~~LKLKDWPp~~~F~e~lP~~~~df~~~LPlpEYt~p-~G~LNLAs~LP~~~~kPDLGPK~YiAYG~~~~  170 (392)
T 2ypd_A           92 KRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNP-EGKFNLASHLPGFFVRPDLGPRLCSAYGVVAA  170 (392)
T ss_dssp             GC------CCCCEEECSSSBTHHHHHHSHHHHHHHHHHCSSHHHHST-TCTTCCTTTSCGGGCC---CCEEEEECCSTTT
T ss_pred             cCCcCCCCCcceeeecCCCChHHHHHHhHHHHHHHHHcCCchHhhCC-CccchHHHhCCCCCCCCCCCcchhhhcCcchh
Confidence            3   4699999999999999999999999999999999999999998 59999999999999999999999999999999


Q ss_pred             cCCCCCcccccccccccceeeeecccccCChhHHHHHHHHHHHhhhhhhhhhcCCccccccccccCCCCCccccccCCCC
Q 039227          434 LGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSM  513 (654)
Q Consensus       434 lG~gdSvTkLH~DmSDAVNiL~h~aev~~~~~~~~~i~~l~~~~~~q~~~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  513 (654)
                      +|+|+|||||||||||||||||||++++. .+...+. ++.+++.+++.++.+.                          
T Consensus       171 ~~~~~gvT~LH~DmsDaVNiL~h~~~~~~-~~~~~~~-~~l~~~~~~~~d~~~~--------------------------  222 (392)
T 2ypd_A          171 KDHDIGTTNLHIEVSDVVNILVYVGIAKG-NGILSKA-GILKKFEEEDLDDILR--------------------------  222 (392)
T ss_dssp             TCTTCCSEEEEECSSEEEEEEEEEECCBC-TTCCCHH-HHHHHHHTSCCCHHHH--------------------------
T ss_pred             cccCCCcceeeeehhhhhhhhheecccCc-cccchhh-hhhhhhhhccccHHHh--------------------------
Confidence            99999999999999999999999987652 2222222 3334455544333321                          


Q ss_pred             cccccccCCCCCcceeeeecCCChhHHHHHHHHHHhhhcccccCCCCcccCCcccCcceeCHHHHHHHHHHhCccceEEE
Q 039227          514 QSNTLSLNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFV  593 (654)
Q Consensus       514 ~~~~~~~~~~~~GAlWdIFrrqD~~KLreyL~kh~~Ef~~~~~~~~~~v~dPIhdQ~~YL~~~hr~rLkeEyGVepwtf~  593 (654)
                        .++.+.++.+||+||||||||++|||+||++|++||.    .++.+++||||||+||||++||++|+|||||+||||+
T Consensus       223 --~r~~~~~~~~GAlW~Ifr~~D~~klr~~L~~~~~e~~----~~~~~~~dPihdq~~yL~~~~r~~L~ee~gv~~~~~~  296 (392)
T 2ypd_A          223 --KRLKDSSEIPGALWHIYAGKDVDKIREFLQKISKEQG----LEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLI  296 (392)
T ss_dssp             --HHHTCTTCCEEEEEEEECGGGHHHHHHHHHHHHHHHC----------CCHHHHTCCCCCHHHHHHHHHHHCCCCEEEE
T ss_pred             --hhccCCCCCCCceeeeeCHhhHHHHHHHHHHHHHhhC----CCccCCCCcCcCCCEEecHHHHHHHHHhcCCeeEEEE
Confidence              1122345789999999999999999999999999984    5577899999999999999999999999999999999


Q ss_pred             eecCceEEecCCCccccccccccchhhccccCccChHHHHHHHHHHccCCchhccccccCC
Q 039227          594 QQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFRTLPRNHRAKKDKLQ  654 (654)
Q Consensus       594 Q~~GeAVFIPAGcPHQVrNL~SCIKVA~DFVSPEnV~ec~~Lt~EfR~Lp~~h~~keDkLe  654 (654)
                      |++|||||||||||||||||+||||||+||||||||++|++||+|||+|| +|++||||||
T Consensus       297 Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~~~~c~~lt~E~R~l~-~~~~~edkLq  356 (392)
T 2ypd_A          297 QFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLLK-EEINYDDKLQ  356 (392)
T ss_dssp             EETTCEEEECTTCEEEEEESSEEEEEEEEECCGGGHHHHHHHHHHC---------------
T ss_pred             EcCCCEEEecCCCHHHHhcccchhhHhhhhcChhhHHHHHHHHHHHhhcc-hhhhhHHHHH
Confidence            99999999999999999999999999999999999999999999999997 5999999997
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A* Back     alignment and structure
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A* Back     alignment and structure
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A* Back     alignment and structure
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A* Back     alignment and structure
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A Back     alignment and structure
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens} Back     alignment and structure
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A* Back     alignment and structure
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ... Back     alignment and structure
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A* Back     alignment and structure
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A* Back     alignment and structure
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A* Back     alignment and structure
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens} Back     alignment and structure
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A* Back     alignment and structure
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A* Back     alignment and structure
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A* Back     alignment and structure
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A* Back     alignment and structure
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A* Back     alignment and structure
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens} Back     alignment and structure
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha} Back     alignment and structure
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris} Back     alignment and structure
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9 Back     alignment and structure
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina} Back     alignment and structure
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A Back     alignment and structure
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134} Back     alignment and structure
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11 Back     alignment and structure
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp} Back     alignment and structure
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A Back     alignment and structure
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18 Back     alignment and structure
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I} Back     alignment and structure
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus} Back     alignment and structure
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A* Back     alignment and structure
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense} Back     alignment and structure
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens} Back     alignment and structure
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A Back     alignment and structure
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A Back     alignment and structure
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400} Back     alignment and structure
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A Back     alignment and structure
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris} Back     alignment and structure
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1} Back     alignment and structure
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A* Back     alignment and structure
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15 Back     alignment and structure
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis} Back     alignment and structure
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A* Back     alignment and structure
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis} Back     alignment and structure
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans} Back     alignment and structure
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans} Back     alignment and structure
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile} Back     alignment and structure
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum} Back     alignment and structure
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10 Back     alignment and structure
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp} Back     alignment and structure
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans} Back     alignment and structure
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A* Back     alignment and structure
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50} Back     alignment and structure
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis} Back     alignment and structure
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus} Back     alignment and structure
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 654
d1vrba1319 b.82.2.11 (A:8-326) Putative asparaginyl hydroxyla 0.003
>d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC {Bacillus subtilis [TaxId: 1423]} Length = 319 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Asparaginyl hydroxylase-like
domain: Putative asparaginyl hydroxylase YxbC
species: Bacillus subtilis [TaxId: 1423]

 Score = 37.6 bits (86), Expect = 0.003
 Identities = 16/130 (12%), Positives = 40/130 (30%), Gaps = 24/130 (18%)

Query: 529 WDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVE 588
           W + + E+V    ++       +         +   P                 +E   +
Sbjct: 155 WKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPP-----------------KEDLPD 197

Query: 589 PWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENIN-------ECIRLTDEFRT 641
                   G  + +P G  H  ++  +   + + F  P  ++       + +   + FR 
Sbjct: 198 AEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFGQPAWLDLMLAALRKKLISDNRFRE 257

Query: 642 LPRNHRAKKD 651
           L  NH++  +
Sbjct: 258 LAVNHQSLHE 267

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query654
d1h2ka_335 Hypoxia-inducible factor HIF ihhibitor (FIH1) {Hum 99.14
d1vrba1319 Putative asparaginyl hydroxylase YxbC {Bacillus su 98.81
d1vj2a_114 Hypothetical protein TM1459 {Thermotoga maritima [ 94.09
d1v70a_105 Hypothetical protein TTHA0104 {Thermus thermophilu 93.86
d2b8ma1108 Hypothetical protein MJ0764 {Archaeon Methanococcu 93.24
d1yhfa1112 Hypothetical protein SPy1581 {Streptococcus pyogen 92.43
d1rc6a_253 Hypothetical protein YlbA {Escherichia coli [TaxId 91.47
d1lr5a_160 Auxin binding protein {Maize (Zea mays) [TaxId: 45 90.64
d1o4ta_115 Hypothetical protein TM1287 {Thermotoga maritima [ 90.63
d1sefa_250 Hypothetical protein EF2996 {Enterococcus faecalis 90.59
d2bnma2122 Hydroxypropylphosphonic acid epoxidase Fom4, C-ter 87.97
d1sfna_245 Hypothetical protein DR1152 {Deinococcus radiodura 84.6
d1sq4a_273 Glyoxylate-induced protein PA1140 {Pseudomonas aer 82.48
d1juha_348 Quercetin 2,3-dioxygenase {Aspergillus japonicus [ 81.67
d1x82a_190 Glucose-6-phosphate isomerase, GPI {Archaeon Pyroc 81.59
d1zx5a1299 Putative mannosephosphate isomerase AF0035 {Archae 81.25
d1qwra_315 Mannose-6-phosphate isomerase ManA {Bacillus subti 80.8
>d1h2ka_ b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibitor (FIH1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Hypoxia-inducible factor HIF ihhibitor (FIH1)
domain: Hypoxia-inducible factor HIF ihhibitor (FIH1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.8e-11  Score=124.92  Aligned_cols=39  Identities=23%  Similarity=0.368  Sum_probs=34.8

Q ss_pred             hCccceEEEeecCceEEecCCCccccccccc-cchhhccc
Q 039227          585 FGVEPWSFVQQLGEAVLIPAGCPHQVRNLMS-CTKIALDF  623 (654)
Q Consensus       585 yGVepwtf~Q~~GeAVFIPAGcPHQVrNL~S-CIKVA~DF  623 (654)
                      .++.+|.+++.+||++|||+|..|||+||.+ +|.|++.|
T Consensus       242 ~~~~~~~~~l~pGd~L~iP~~w~H~V~~~~~~~~sisvn~  281 (335)
T d1h2ka_         242 QNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNF  281 (335)
T ss_dssp             GGCCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEE
T ss_pred             hcCCceEEEECCCCEEeeCCCCeEEEEEcCCCCeEEEEEe
Confidence            3457999999999999999999999999965 88888876
>d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vj2a_ b.82.1.10 (A:) Hypothetical protein TM1459 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1v70a_ b.82.1.9 (A:) Hypothetical protein TTHA0104 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2b8ma1 b.82.1.18 (A:1-108) Hypothetical protein MJ0764 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1yhfa1 b.82.1.9 (A:1-112) Hypothetical protein SPy1581 {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1rc6a_ b.82.1.11 (A:) Hypothetical protein YlbA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lr5a_ b.82.1.2 (A:) Auxin binding protein {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1o4ta_ b.82.1.9 (A:) Hypothetical protein TM1287 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1sefa_ b.82.1.11 (A:) Hypothetical protein EF2996 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2bnma2 b.82.1.10 (A:77-198) Hydroxypropylphosphonic acid epoxidase Fom4, C-terminal domain {Streptomyces wedmorensis [TaxId: 43759]} Back     information, alignment and structure
>d1sfna_ b.82.1.11 (A:) Hypothetical protein DR1152 {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1sq4a_ b.82.1.11 (A:) Glyoxylate-induced protein PA1140 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1juha_ b.82.1.5 (A:) Quercetin 2,3-dioxygenase {Aspergillus japonicus [TaxId: 34381]} Back     information, alignment and structure
>d1x82a_ b.82.1.7 (A:) Glucose-6-phosphate isomerase, GPI {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1zx5a1 b.82.1.3 (A:1-299) Putative mannosephosphate isomerase AF0035 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1qwra_ b.82.1.3 (A:) Mannose-6-phosphate isomerase ManA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure