Citrus Sinensis ID: 039343

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------
Protein Sequence
MRQEVALQRTTSTCTSRSSKRITPSSNFNRSTSVSSSIPENEECSGKLLITRGSHSPVSVQRFNRVHSRFTSLVRSLLNIIAFPNIILPTCKWLSMPTQLSVTPSLGRKVTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGPVQTGKGRAGRLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDGRKVGASEGELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI
Secondary Structure (PSIPRED)
cccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEEEEEEccEEEEEEEcccccccEEEEEccccHHHHHHHHHcccEEEEEEEccccccccccccccccccccEEEEEEcccEEEEEEEcccccccHHHHHHccEEEEccccccccccccccccccccEEEEEEEEEEEEcccccccEEEEcccccccccEEEEEEEc
Secondary Structure Prediction (SSPRO)
cccEEEEEEcccccccccccccccccccccccccccccccccccccccEEccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEEEcccccEEEEEEEcccccccEEEEEcccHHHHHHHHHHcccEEEEEEEccccccccccccccccccccEEEEEEcccEEEEEEEccccHHHHHHHHHHccEEEcccEccccccccccccccccEEEEEEEEEEEEccccccEEEEEccccccccEEEEEEEEc
Coil and Loop (DISEMBL)
mrqevalqrttstctsrsskritpssnfnrstsvsssipeneecsgkllitrgshspvsvqrfNRVHSRFTSLVRSLLNiiafpniilptckwlsmptqlsvtpslgrkvtgtlfgnrrghvsfavqddprsepVLLLELAMSTATLVKEMASGLVRIALEcekagpvqtgkgragrlfhepmwtmycngrkcgyatsracggldwhVLTTVQSvsvgagvipvvedgrkvgasegELLYMRARFERvvgsrdseafymlnpdnnggpeLSIFLLRI
Flexible Loop (DISEMBL)
mrqevalqrttstctsrsskritpssnfnrstsvsssipeneECSGKLLITRGSHSPVSVQRFNRVHSRFTSLVRSLLNIIAFPNIILPTCKWLSMPTQLSVTPSLGRKVTGTLFGNRRGHVSfavqddprsEPVLLLELAMSTATLVKEMASGLVRIALECekagpvqtgkgragrlfHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVsvgagvipvvedgrkvgasegellyMRARFERVVGSRDSEAfymlnpdnnggpelsifllri
Low Complexity Region (SEG)
MRQEVALQrttstctsrssKRITPssnfnrstsvsssIPENEECSGKLLITRGSHSPVSVQRFNRVHSRFTSLVRSLLNIIAFPNIILPTCKWLSMPTQLSVTPSLGRKVTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGPVQTGKGRAGRLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDGRKVGASEGELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI
Disordered region (IsUnstruct)
************************************************LI*******VSVQRFNRVHSRFTSLVRSLLNIIAFPNIILPTCKWLSMPTQLSVTPSLGRKVTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGPVQTGKGRAGRLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDGRKVGASEGELLYMRARFERVVGSRDSEAFYMLN**********IF****
Disordered Region (DISOPRED)
************************************************************************LVRSLLNIIAFPNIILPTCKWL***************VTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALE********************PMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVV************LLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI
Disordered Region (DISEMBL)
******************************************ECSGKLLITRGSHSPVSVQRFNRVHSRFTSLVRSLLNIIAFPNIILPTCKWLSMPTQLSVTPSLGRKVTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGPVQTGKGRAGRLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDGRKVGASEGELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI
Disordered Region (DISPRO)
********RTT******************************EECSGKLLITRGSHSPVSVQRFNRVHSRFTSLVRSLLNIIAFPNIILPTCKWLSMPTQLSVTPSLGRKVTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAG********AGRLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDG*****SEGELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRQEVALQRTTSTCTSRSSKRITPSSNFNRSTSVSSSIPENEECSGKLLITRGSHSPVSVQRFNRVHSRFTSLVRSLLNIIAFPNIILPTCKWLSMPTQLSVTPSLGRKVTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGPVQTGKGRAGRLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDGRKVGASEGELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	277
255585494	276	conserved hypothetical protein [Ricinus	0.906	0.909	0.754	1e-107
224086970	215	predicted protein [Populus trichocarpa]	0.768	0.990	0.790	3e-93
297739638	279	unnamed protein product [Vitis vinifera]	0.927	0.921	0.655	5e-92
225441870	262	PREDICTED: uncharacterized protein LOC10	0.877	0.927	0.673	4e-90
224139882	237	predicted protein [Populus trichocarpa]	0.833	0.974	0.669	2e-88
356534657	296	PREDICTED: uncharacterized protein LOC10	0.974	0.912	0.597	4e-88
356498586	294	PREDICTED: uncharacterized protein LOC10	0.949	0.894	0.613	5e-88
18405770	297	uncharacterized protein [Arabidopsis tha	0.916	0.855	0.515	1e-65
21593037	297	unknown [Arabidopsis thaliana]	0.916	0.855	0.512	5e-65
297824127	254	predicted protein [Arabidopsis lyrata su	0.725	0.791	0.588	7e-65

>gi|255585494|ref|XP_002533439.1| conserved hypothetical protein [Ricinus communis] gi|223526713|gb|EEF28946.1| conserved hypothetical protein [Ricinus communis]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/253 (75%), Positives = 218/253 (86%), Gaps = 2/253 (0%)

Query: 26  SNFNRSTSVSS-SIPENEECSGKLLITRGSHSPVSVQRFNRVHSRFTSLVRSLLNIIAFP 84
           SN+ RSTS    ++PE E+ S KLL+ R S + VS+QR N++HSRF+SL+RS+  I+AFP
Sbjct: 25  SNYMRSTSTPHPTVPEREDISDKLLLRRDSPAAVSLQRLNKLHSRFSSLLRSIFKIVAFP 84

Query: 85  NIILPTCKWLSMPTQLSVTPSLGRKVTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMST 144
           NII+PTCKWLS+PT LS+  SLGRKVTGTLFG+RRGHVSFAVQDDPRSEPVLLLELAMST
Sbjct: 85  NIIIPTCKWLSIPTHLSIKSSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELAMST 144

Query: 145 ATLVKEMASGLVRIALECEKAGPVQTGKGRAGRLFHEPMWTMYCNGRKCGYATSRACGGL 204
           +TLVKEM+SGLVRIALEC+K   V T   R+G+LF+EP WTMYCNGRKCGYA SR C  L
Sbjct: 145 STLVKEMSSGLVRIALECDKVQ-VPTNGTRSGKLFNEPTWTMYCNGRKCGYAVSRTCTEL 203

Query: 205 DWHVLTTVQSVSVGAGVIPVVEDGRKVGASEGELLYMRARFERVVGSRDSEAFYMLNPDN 264
           DWHVL TVQSVSVGAGVIP+VEDGRK   SEGELLYMRA+FERVVGSRDSEAFYM+NP+ 
Sbjct: 204 DWHVLNTVQSVSVGAGVIPMVEDGRKNAGSEGELLYMRAKFERVVGSRDSEAFYMMNPEG 263

Query: 265 NGGPELSIFLLRI 277
           NGGPELSIFLLRI
Sbjct: 264 NGGPELSIFLLRI 276

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086970|ref|XP_002308021.1| predicted protein [Populus trichocarpa] gi|222853997|gb|EEE91544.1| predicted protein [Populus trichocarpa]

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 170/215 (79%), Positives = 186/215 (86%), Gaps = 2/215 (0%)

Query: 65  RVHSRFTSLVRSLLNIIAFPNIILP-TCKWLSMPTQ-LSVTPSLGRKVTGTLFGNRRGHV 122
           +++SRFT   RS+L II+FPNII+P TCKWLS PTQ LS+TPSLGRKVTGTLFGNR GHV
Sbjct: 1   KIYSRFTCFFRSILKIISFPNIIIPKTCKWLSTPTQYLSLTPSLGRKVTGTLFGNRHGHV 60

Query: 123 SFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGPVQTGKGRAGRLFHEP 182
           SFAVQDDP SEPVLLLEL++STA LVKEM+SGLVRIALECEK    Q   GR G+LF+EP
Sbjct: 61  SFAVQDDPGSEPVLLLELSISTAMLVKEMSSGLVRIALECEKVRAPQVQTGRPGKLFNEP 120

Query: 183 MWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDGRKVGASEGELLYMR 242
            WTMYCNGRKCGYA SR C   DW+VL TVQSVSVGAGVIPVVEDGRK G  EGELLYMR
Sbjct: 121 TWTMYCNGRKCGYAVSRRCTYSDWYVLGTVQSVSVGAGVIPVVEDGRKSGGGEGELLYMR 180

Query: 243 ARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI 277
           A+FERVVGSRDSEAFYM+NP+ NGGPELSIFLLRI
Sbjct: 181 AKFERVVGSRDSEAFYMMNPEGNGGPELSIFLLRI 215

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739638|emb|CBI29820.3| unnamed protein product [Vitis vinifera]

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 179/273 (65%), Positives = 210/273 (76%), Gaps = 16/273 (5%)

Query: 5   VALQRTTSTCTSRSSKRITPSSNFNRSTSVSSSIPENEECSGKLLITRGSHSPVSVQRFN 64
           V +    S+C  RS+++I PS+ + RS+S S  I      S KLL+ R S SP +  R  
Sbjct: 23  VEMSEDVSSC--RSTRKILPST-YTRSSSESGDI------SDKLLVPRDS-SP-AFPRLA 71

Query: 65  RVHSRFTSLVRSLLNIIAFPNIILPTCKWLSMPTQLSVTPSLGRKVTGTLFGNRRGHVSF 124
           R  +  ++L+RSLL +I+FP II PTC+WLS+P  LS+TPSLGRKVTGTLFG+RRGHVSF
Sbjct: 72  RTRNSISALLRSLLGVISFPTII-PTCRWLSIPNHLSITPSLGRKVTGTLFGHRRGHVSF 130

Query: 125 AVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGPVQTGKGRAGRLFHEPMW 184
           AVQDDPRSEPVLLLELA ST+TLVKEM+SGLVRIALECEK       +GR  +LF EPMW
Sbjct: 131 AVQDDPRSEPVLLLELATSTSTLVKEMSSGLVRIALECEKVA----ARGRPVKLFQEPMW 186

Query: 185 TMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDGRKVGASEGELLYMRAR 244
           TMYCNGRKCGYA SR CG  D HVL+TVQSVS GAGVIP  ++ + +   EGE+LYMRAR
Sbjct: 187 TMYCNGRKCGYAMSRECGEFDRHVLSTVQSVSAGAGVIPTDDNRKSIVGVEGEMLYMRAR 246

Query: 245 FERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI 277
           FERVVGSRDSEAFYM+NPD  GGPELSIFLLRI
Sbjct: 247 FERVVGSRDSEAFYMMNPDGTGGPELSIFLLRI 279

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441870|ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257201 [Vitis vinifera]

 Score =  337 bits (863), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 173/257 (67%), Positives = 202/257 (78%), Gaps = 14/257 (5%)

Query: 21  RITPSSNFNRSTSVSSSIPENEECSGKLLITRGSHSPVSVQRFNRVHSRFTSLVRSLLNI 80
           +I PS+ + RS+S      E+ + S KLL+ R S SP +  R  R  +  ++L+RSLL +
Sbjct: 20  KILPST-YTRSSS------ESGDISDKLLVPRDS-SP-AFPRLARTRNSISALLRSLLGV 70

Query: 81  IAFPNIILPTCKWLSMPTQLSVTPSLGRKVTGTLFGNRRGHVSFAVQDDPRSEPVLLLEL 140
           I+FP II PTC+WLS+P  LS+TPSLGRKVTGTLFG+RRGHVSFAVQDDPRSEPVLLLEL
Sbjct: 71  ISFPTII-PTCRWLSIPNHLSITPSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLEL 129

Query: 141 AMSTATLVKEMASGLVRIALECEKAGPVQTGKGRAGRLFHEPMWTMYCNGRKCGYATSRA 200
           A ST+TLVKEM+SGLVRIALECEK       +GR  +LF EPMWTMYCNGRKCGYA SR 
Sbjct: 130 ATSTSTLVKEMSSGLVRIALECEKVA----ARGRPVKLFQEPMWTMYCNGRKCGYAMSRE 185

Query: 201 CGGLDWHVLTTVQSVSVGAGVIPVVEDGRKVGASEGELLYMRARFERVVGSRDSEAFYML 260
           CG  D HVL+TVQSVS GAGVIP  ++ + +   EGE+LYMRARFERVVGSRDSEAFYM+
Sbjct: 186 CGEFDRHVLSTVQSVSAGAGVIPTDDNRKSIVGVEGEMLYMRARFERVVGSRDSEAFYMM 245

Query: 261 NPDNNGGPELSIFLLRI 277
           NPD  GGPELSIFLLRI
Sbjct: 246 NPDGTGGPELSIFLLRI 262

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139882|ref|XP_002323323.1| predicted protein [Populus trichocarpa] gi|222867953|gb|EEF05084.1| predicted protein [Populus trichocarpa]

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 164/245 (66%), Positives = 191/245 (77%), Gaps = 14/245 (5%)

Query: 37  SIPENEECSGKLLITRGSHSPVSVQRFN--RVHSRFTSLVRSLLNIIAFPNIILPT-CKW 93
           SIPE E+           HS +SV+R N  +++SRFT    S+  I++FPNI+ PT CKW
Sbjct: 3   SIPEQED----------HHSQISVRRLNNTKINSRFTCFFSSIFKILSFPNILFPTACKW 52

Query: 94  LSMPTQ-LSVTPSLGRKVTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMA 152
           LS+PTQ LS+TPSLGRKVTGT+FGNR GHV+FAVQDDP SEPVLLLEL MSTA LVKEM+
Sbjct: 53  LSIPTQNLSITPSLGRKVTGTIFGNRHGHVNFAVQDDPVSEPVLLLELPMSTAMLVKEMS 112

Query: 153 SGLVRIALECEKAGPVQTGKGRAGRLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTV 212
           SGLVRIALEC+K    Q   GR G+LF+EP WTMYCNGRKCGYA SR C   D +V  TV
Sbjct: 113 SGLVRIALECDKVRAPQVQTGRQGKLFNEPTWTMYCNGRKCGYAVSRRCTYSDQYVFETV 172

Query: 213 QSVSVGAGVIPVVEDGRKVGASEGELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSI 272
           +SVS GAGVIPV+EDG K    +GEL+YMRA+FERVVGSRDSEA+YM+NP+ NG PELSI
Sbjct: 173 KSVSAGAGVIPVIEDGHKSDGVDGELMYMRAKFERVVGSRDSEAYYMMNPEGNGVPELSI 232

Query: 273 FLLRI 277
           FLLRI
Sbjct: 233 FLLRI 237

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534657|ref|XP_003535869.1| PREDICTED: uncharacterized protein LOC100775417 [Glycine max]

 Score =  330 bits (846), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 178/298 (59%), Positives = 218/298 (73%), Gaps = 28/298 (9%)

Query: 2   RQEVALQRTTSTCT--SRSSKRITPSSNFNRSTSVSSSIPENEECSGKLLITRGSHSPVS 59
           +++   QR++S CT  +R+S+RI PS+  +   S      E+++ S  LL+ RGS   VS
Sbjct: 5   QKQKIFQRSSSACTVTTRNSRRILPSNLTHHFRSF-----ESDDVSDNLLVRRGSSPSVS 59

Query: 60  VQRFNRVHS-------RFTSLVRSLLNIIAFPNIILPTCKWLSMPTQLSVTPSLGRKVTG 112
                + H+       + +SL+RS LNI  FP +I PTCKWL++P+QLSVTPSLGRKVTG
Sbjct: 60  NLYQQQQHTPKLTQQNKISSLIRSFLNIFTFPTMI-PTCKWLTIPSQLSVTPSLGRKVTG 118

Query: 113 TLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGP----- 167
           TLFG+RRGH+SFAVQ  PR++PVLLLELAMST++LVKEM+SGLVRIALE +K        
Sbjct: 119 TLFGHRRGHISFAVQLHPRADPVLLLELAMSTSSLVKEMSSGLVRIALESQKLSASTITR 178

Query: 168 ---VQTGKGRAGRLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPV 224
                +G+ +  +LF EP WTMYCNGR CGYA SR CG LDWHVL+T+QSVSVGAGVIP+
Sbjct: 179 TMRSNSGRQQQCKLFQEPSWTMYCNGRNCGYAVSRTCGDLDWHVLSTIQSVSVGAGVIPL 238

Query: 225 VED-----GRKVGASEGELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI 277
           +ED         G SEGEL+YMRARFERVVGSRDSEAFYMLNPD NGGPELSIFLLRI
Sbjct: 239 LEDGKAASAAAGGGSEGELMYMRARFERVVGSRDSEAFYMLNPDGNGGPELSIFLLRI 296

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498586|ref|XP_003518131.1| PREDICTED: uncharacterized protein LOC100792802 [Glycine max]

 Score =  330 bits (845), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 186/303 (61%), Positives = 219/303 (72%), Gaps = 40/303 (13%)

Query: 2   RQEVALQRTTSTCTS--RSSKRITPSSNFNRSTSVSSSIPENEECSGKLLITRGS----- 54
           +++   QR+TS CT+  R+S+RI PS N     S      E+++ S KLL+ RGS     
Sbjct: 5   QKQQIFQRSTSACTATTRNSRRILPS-NLTHFRSF-----ESDDVSDKLLVRRGSSPSVS 58

Query: 55  ----------HSPVSVQRFNRVHSRFTSLVRSLLNIIAFPNIILPTCKWLSMPTQLSVTP 104
                     H+P   Q+     ++ +SL+RS LNI  FP +I PTCKWL++P+QLSVTP
Sbjct: 59  NLYQQQQQQHHAPKLTQQ-----NKISSLIRSFLNIFTFPTMI-PTCKWLTIPSQLSVTP 112

Query: 105 SLGRKVTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEK 164
           SLGRKVTGTLFG+RRGH+SFAVQ  PR+EPVLLLELAMST++LVKEM+S LVRIALEC+K
Sbjct: 113 SLGRKVTGTLFGHRRGHISFAVQLHPRAEPVLLLELAMSTSSLVKEMSSSLVRIALECQK 172

Query: 165 AGPV------QTGKGRAGRLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVG 218
                      +G GR  RLF EP WTMYCNGR CGYA SR CG LD HVL+TVQSVSVG
Sbjct: 173 VSVTAAVAHNNSGGGRR-RLFQEPAWTMYCNGRNCGYAVSRTCGDLDLHVLSTVQSVSVG 231

Query: 219 AGVIPVVED----GRKVGASEGELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFL 274
           AGVIP++ED    G   G SEGEL+YMRARFERVVGSRDSEAFYMLNPD NGGPELSIFL
Sbjct: 232 AGVIPLLEDGKGGGSGNGGSEGELMYMRARFERVVGSRDSEAFYMLNPDGNGGPELSIFL 291

Query: 275 LRI 277
           LRI
Sbjct: 292 LRI 294

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18405770|ref|NP_565953.1| uncharacterized protein [Arabidopsis thaliana] gi|13569548|gb|AAK31144.1|AF345340_1 unknown [Arabidopsis thaliana] gi|2618701|gb|AAB84348.1| expressed protein [Arabidopsis thaliana] gi|109946471|gb|ABG48414.1| At2g41660 [Arabidopsis thaliana] gi|110735918|dbj|BAE99934.1| hypothetical protein [Arabidopsis thaliana] gi|330254919|gb|AEC10013.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  255 bits (652), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 162/314 (51%), Positives = 204/314 (64%), Gaps = 60/314 (19%)

Query: 3   QEVALQRTTSTCTSRSSKRITPSSNFNRST--------SVSSSIPENEECSGKLLIT--- 51
           QE+ LQR+ S     +S++I P ++  RS+        ++  SIPE+E     L +    
Sbjct: 5   QELTLQRSFSY----NSRKINPVTSPARSSHVRSPSSSALIPSIPEHE-----LFLVPCR 55

Query: 52  RGSHSPVSV-----QRFNRVHSRFTSLVRSLLNIIAFPNIILPTCKWLSMPTQLSV---- 102
           R S+ P+S          + H +F+ L+RS +NII      +P CK LS+P+  S     
Sbjct: 56  RCSYVPLSSSSSASHNIGKFHLKFSLLLRSFINIIN-----IPACKMLSLPSPPSSSSSV 110

Query: 103 -----------TPSLGRKVTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEM 151
                      + SLGR+VTGTL+G++RGHV+F+VQ + RS+PVLLL+LAMSTATLVKEM
Sbjct: 111 SNQLISLVTGGSSSLGRRVTGTLYGHKRGHVTFSVQYNQRSDPVLLLDLAMSTATLVKEM 170

Query: 152 ASGLVRIALECEKAGPVQTGKGRAG-RLFHEPMWTMYCNGRKCGYATSR--ACGGLDWHV 208
           +SGLVRIALECEK       + R+G +LF EP WTMYCNGRKCGYA SR  AC   DW V
Sbjct: 171 SSGLVRIALECEK-------RHRSGTKLFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRV 223

Query: 209 LTTVQSVSVGAGVIP---VVEDGRKVGASE--GELLYMRARFERVVGSRDSEAFYMLNPD 263
           L TV  V+VGAGVIP    ++D   VG+    GELLYMR +FERVVGSRDSEAFYM+NPD
Sbjct: 224 LNTVSRVTVGAGVIPTPKTIDDVSGVGSGTELGELLYMRGKFERVVGSRDSEAFYMMNPD 283

Query: 264 NNGGPELSIFLLRI 277
            NGGPELSIFLLRI
Sbjct: 284 KNGGPELSIFLLRI 297

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593037|gb|AAM64986.1| unknown [Arabidopsis thaliana]

 Score =  253 bits (647), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 161/314 (51%), Positives = 203/314 (64%), Gaps = 60/314 (19%)

Query: 3   QEVALQRTTSTCTSRSSKRITPSSNFNRST--------SVSSSIPENEECSGKLLIT--- 51
           QE+ LQR+ S     +S++I P ++  RS+        ++  SIPE+E     L +    
Sbjct: 5   QELTLQRSFSY----NSRKINPVTSPARSSHVRSPSSSALIPSIPEHE-----LFLVPCR 55

Query: 52  RGSHSPVSV-----QRFNRVHSRFTSLVRSLLNIIAFPNIILPTCKWLSMPTQLSV---- 102
           R S+ P+S          + H +F+ L+RS +NII      +P CK LS+P+  S     
Sbjct: 56  RCSYVPLSSSSSASHNIGKFHLKFSLLLRSFINIIN-----IPACKMLSLPSPPSSSSSV 110

Query: 103 -----------TPSLGRKVTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEM 151
                      + SLGR+VTGTL+G++RGHV+F+VQ +  S+PVLLL+LAMSTATLVKEM
Sbjct: 111 SNQLISLVTGGSSSLGRRVTGTLYGHKRGHVTFSVQYNQSSDPVLLLDLAMSTATLVKEM 170

Query: 152 ASGLVRIALECEKAGPVQTGKGRAG-RLFHEPMWTMYCNGRKCGYATSR--ACGGLDWHV 208
           +SGLVRIALECEK       + R+G +LF EP WTMYCNGRKCGYA SR  AC   DW V
Sbjct: 171 SSGLVRIALECEK-------RHRSGTKLFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRV 223

Query: 209 LTTVQSVSVGAGVIP---VVEDGRKVGASE--GELLYMRARFERVVGSRDSEAFYMLNPD 263
           L TV  V+VGAGVIP    ++D   VG+    GELLYMR +FERVVGSRDSEAFYM+NPD
Sbjct: 224 LNTVSRVTVGAGVIPTPKTIDDVSGVGSGTELGELLYMRGKFERVVGSRDSEAFYMMNPD 283

Query: 264 NNGGPELSIFLLRI 277
            NGGPELSIFLLRI
Sbjct: 284 KNGGPELSIFLLRI 297

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824127|ref|XP_002879946.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297325785|gb|EFH56205.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  253 bits (646), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 139/236 (58%), Positives = 167/236 (70%), Gaps = 35/236 (14%)

Query: 65  RVHSRFTSLVRSLLNIIAFPNIILPTCK----------WLSMPTQL-----SVTPSLGRK 109
           ++H +F+ L+RS +NII      +P CK             +  QL       + SLGR+
Sbjct: 31  KLHLKFSLLLRSFINIIN-----IPACKILSLPSPPSSSSGVSNQLISLVTGGSSSLGRR 85

Query: 110 VTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGPVQ 169
           VTGTL+G++RGHV+F+VQ + RS+PVLLL+LAMSTATLVKEM+SGLVRIALECEK     
Sbjct: 86  VTGTLYGHKRGHVTFSVQYNQRSDPVLLLDLAMSTATLVKEMSSGLVRIALECEK----- 140

Query: 170 TGKGRAG-RLFHEPMWTMYCNGRKCGYATSR--ACGGLDWHVLTTVQSVSVGAGVIP--- 223
             + R+G +LF EP WTMYCNGRKCGYA SR  AC   DW VL TV  V+VGAGVIP   
Sbjct: 141 --RHRSGTKLFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRVLNTVSRVTVGAGVIPTPK 198

Query: 224 VVEDGRKVGASE--GELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI 277
            ++D   VG+    GELLYMR +FERVVGSRDSEAFYM+NPD NGGPELSIFLLRI
Sbjct: 199 TIDDVSGVGSGTELGELLYMRGKFERVVGSRDSEAFYMMNPDKNGGPELSIFLLRI 254

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	277
TAIR|locus:2062647	297	MIZ1 "AT2G41660" [Arabidopsis	0.819	0.764	0.573	4.2e-63
TAIR|locus:2178312	277	AT5G23100 "AT5G23100" [Arabido	0.364	0.364	0.613	1.8e-52
TAIR|locus:2102360	267	AT3G25640 "AT3G25640" [Arabido	0.602	0.625	0.569	1.2e-47
TAIR|locus:2169454	261	AT5G06990 "AT5G06990" [Arabido	0.736	0.781	0.461	4e-42
TAIR|locus:2052541	252	AT2G21990 "AT2G21990" [Arabido	0.747	0.821	0.447	4.2e-40
TAIR|locus:2122546	264	AT4G39610 "AT4G39610" [Arabido	0.768	0.806	0.414	1.4e-39
TAIR|locus:2199577	245	AT1G21050 "AT1G21050" [Arabido	0.563	0.636	0.520	8e-37
TAIR|locus:2011766	226	AT1G76610 "AT1G76610" [Arabido	0.592	0.725	0.486	1.9e-35
TAIR|locus:2065609	247	AT2G37880 "AT2G37880" [Arabido	0.574	0.643	0.494	1.9e-35
TAIR|locus:2165477	238	AT5G42680 "AT5G42680" [Arabido	0.638	0.743	0.444	7.4e-34

TAIR|locus:2062647 MIZ1 "AT2G41660" [Arabidopsis thaliana (taxid:3702)]

 Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
 Identities = 153/267 (57%), Positives = 181/267 (67%)

Query:    38 IPENE----ECSGKLLITRGSHSPVSVQRFNRVHSRFTSLVRSLLNIIAFPNIILPTCKW 93
             IPE+E     C     +   S S  S     + H +F+ L+RS +NII   NI  P CK 
Sbjct:    44 IPEHELFLVPCRRCSYVPLSSSSSAS-HNIGKFHLKFSLLLRSFINII---NI--PACKM 97

Query:    94 LSMPTQLS------------VT---PSLGRKVTGTLFGNRRGHVSFAVQDDPRSEPVLLL 138
             LS+P+  S            VT    SLGR+VTGTL+G++RGHV+F+VQ + RS+PVLLL
Sbjct:    98 LSLPSPPSSSSSVSNQLISLVTGGSSSLGRRVTGTLYGHKRGHVTFSVQYNQRSDPVLLL 157

Query:   139 ELAMSTATLVKEMASGLVRIALECEKAGPVQTGKGRAG-RLFHEPMWTMYCNGRKCGYAT 197
             +LAMSTATLVKEM+SGLVRIALECEK       + R+G +LF EP WTMYCNGRKCGYA 
Sbjct:   158 DLAMSTATLVKEMSSGLVRIALECEK-------RHRSGTKLFQEPKWTMYCNGRKCGYAV 210

Query:   198 SR--ACGGLDWHVLTTVQSVSVGAGVIPV---VEDGRKVGASE--GELLYMRARFERVVG 250
             SR  AC   DW VL TV  V+VGAGVIP    ++D   VG+    GELLYMR +FERVVG
Sbjct:   211 SRGGACTDTDWRVLNTVSRVTVGAGVIPTPKTIDDVSGVGSGTELGELLYMRGKFERVVG 270

Query:   251 SRDSEAFYMLNPDNNGGPELSIFLLRI 277
             SRDSEAFYM+NPD NGGPELSIFLLRI
Sbjct:   271 SRDSEAFYMMNPDKNGGPELSIFLLRI 297

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0032541 "cortical endoplasmic reticulum" evidence=IDA

GO:0009658 "chloroplast organization" evidence=IMP

TAIR|locus:2178312 AT5G23100 "AT5G23100" [Arabidopsis thaliana (taxid:3702)]

 Score = 341 (125.1 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
 Identities = 62/101 (61%), Positives = 78/101 (77%)

Query:   177 RLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDGRKVGASEG 236
             RL  EPMW  YCNG+KCG+AT R CG  +  VL  ++ VS+GAGV+P  E+    G   G
Sbjct:   177 RLVEEPMWRTYCNGKKCGFATRRECGEKEKKVLKALEMVSMGAGVLPETEEIGGGGGGGG 236

Query:   237 ELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI 277
             +++YMRA+FER+VGSRDSEAFYM+NPD+NG PELSI+LLRI
Sbjct:   237 DIMYMRAKFERIVGSRDSEAFYMMNPDSNGAPELSIYLLRI 277

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2102360 AT3G25640 "AT3G25640" [Arabidopsis thaliana (taxid:3702)]

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 102/179 (56%), Positives = 128/179 (71%)

Query:   106 LGRKVTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKA 165
             LG +V GTLFGNRRGHV FAVQDDP   P +L++L   T+ LV+EMASGLVRIALE    
Sbjct:    94 LGFRVVGTLFGNRRGHVYFAVQDDPTRLPAVLIQLPTPTSVLVREMASGLVRIALE---T 150

Query:   166 GPVQTGKGRAGRLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIP-- 223
                +T   +  +L  E  W  YCNG+KCGYA  + CG  +W VL  V  +++GAGV+P  
Sbjct:   151 AAYKTDSKK--KLLEESTWRTYCNGKKCGYAARKECGEAEWKVLKAVGPITMGAGVLPAT 208

Query:   224 ---VVEDGR-KVGASEGELLYMRARFERVVGSRDSEAFYMLNPD-NNGGPELSIFLLRI 277
                V E+G   VG+ +GEL+YMRARFERVVGSRDSEAFYM+NPD ++GGPELS++ LR+
Sbjct:   209 TTTVDEEGNGAVGSEKGELMYMRARFERVVGSRDSEAFYMMNPDVSSGGPELSVYFLRV 267

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2169454 AT5G06990 "AT5G06990" [Arabidopsis thaliana (taxid:3702)]

 Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
 Identities = 101/219 (46%), Positives = 137/219 (62%)

Query:    68 SRFTSLVRSLLNIIAFPNIILPTCKW-LSMPTQLSVTPSLG-RKVTGTLFGNRRGHVSFA 125
             S+ T L R + ++     I+ P CK+ +    +L      G  +VTGTLFG R+  V+ A
Sbjct:    49 SKSTKLFRRVRSVFRSLPIMSPMCKFPVGGGGRLHENHVHGGTRVTGTLFGYRKTRVNLA 108

Query:   126 VQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGPVQTGKGRAGRLFHEPMWT 185
             VQ++PRS P+LLLELA+ T  L++++  GLVRIALECEK    +T      ++  EP+W 
Sbjct:   109 VQENPRSLPILLLELAIPTGKLLQDLGVGLVRIALECEKKPSEKT------KIIDEPIWA 162

Query:   186 MYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPV-----VED--GRKVGASEGEL 238
             +YCNG+K GY   R     D  V+  + +VS+GAGV+PV      E   G   G  EG+L
Sbjct:   163 LYCNGKKSGYGVKRQPTEEDLVVMQMLHAVSMGAGVLPVSSGAITEQSGGGGGGQQEGDL 222

Query:   239 LYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI 277
              YMRA FERV+GSRDSE +YM+NPD N GPELSIF +R+
Sbjct:   223 TYMRAHFERVIGSRDSETYYMMNPDGNSGPELSIFFVRV 261

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2052541 AT2G21990 "AT2G21990" [Arabidopsis thaliana (taxid:3702)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 97/217 (44%), Positives = 133/217 (61%)

Query:    61 QRFNRVHSRFTSLVRSLLNIIAFPNIILPTCKWLSMPTQLSVTPSLGRKVTGTLFGNRRG 120
             ++  +V   F S+ RS   II      +P     S+P Q   + S G +VTGTLFG R+G
Sbjct:    46 KKSKKVFRVFRSVFRSF-PIITPAACKIPVLPGGSLPDQHR-SGSSGSRVTGTLFGYRKG 103

Query:   121 HVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGPVQTGKGRAGRLFH 180
              VS ++Q+ PR  P L++ELAM T  L KE++ G+VRIALE EK G  +  K     +  
Sbjct:   104 RVSLSIQESPRCLPSLVVELAMQTMVLQKELSGGMVRIALETEKRGDKEKIK-----IMD 158

Query:   181 EPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDGRKVGASEGELLY 240
             EP+WTM+ NG+K GY   R     D +V+  ++ VS+GAGV+P      +    + E+ Y
Sbjct:   159 EPLWTMFSNGKKTGYGVKRDATEEDLNVMELLRPVSMGAGVLP---GNTEFEGPDSEMAY 215

Query:   241 MRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI 277
             MRA FERVVGS+DSE FYML+P+ N GPELSIF +R+
Sbjct:   216 MRAYFERVVGSKDSETFYMLSPEGNNGPELSIFFVRV 252

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2122546 AT4G39610 "AT4G39610" [Arabidopsis thaliana (taxid:3702)]

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 95/229 (41%), Positives = 137/229 (59%)

Query:    57 PVSVQRFNRVHSRFTSLVRSLLNII-AFPNIILPT--CKWLSMPTQLSVT-PSLGR-KVT 111
             P S ++ NR     T++ R L  +  +FP    P+  CK   +   L +  P     ++T
Sbjct:    44 PSSKKKKNR-----TNVFRVLRTVFRSFPIFTTPSVACKIPVIHPGLGLPDPHHNTSRIT 98

Query:   112 GTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGPVQTG 171
             GTLFG R+G VS ++Q++P+  P L++ELAM T TL KE+++G+VRIALE EK       
Sbjct:    99 GTLFGYRKGRVSLSIQENPKCLPSLVVELAMQTTTLQKELSTGMVRIALETEKQPRADNN 158

Query:   172 KGRAGR---LFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDG 228
               +  +   +  EP+WTMYC G K GY   R     D +V+  ++ VS+GAGV+P   + 
Sbjct:   159 NSKTEKKTDILEEPLWTMYCKGEKTGYGVKREATEEDLNVMELLRPVSMGAGVLPGNSES 218

Query:   229 RKVGASEGELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI 277
                   +GE+ YMRA FERV+GS+DSE FYML+P+ N GPELS F +R+
Sbjct:   219 E---GPDGEMAYMRAYFERVIGSKDSETFYMLSPEGNNGPELSFFFVRV 264

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2199577 AT1G21050 "AT1G21050" [Arabidopsis thaliana (taxid:3702)]

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 88/169 (52%), Positives = 114/169 (67%)

Query:   110 VTGTLFGNRRGHVSFAVQDDP-RSEPVLLLELAMSTATLVKEM-ASGLVRIALECEKAGP 167
             V+GT FG+RRG VSF +QD    S P+LLLELA+ TA L KEM   G++RIALEC++   
Sbjct:    87 VSGTFFGHRRGRVSFCLQDAAVGSSPLLLLELAVPTAALAKEMDEEGVLRIALECDRR-- 144

Query:   168 VQTGKGRAGRLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVED 227
              ++   R+  +F  P+W+M+CNGRK G+A  R     D   L  +QSVSVGAGV+P  E 
Sbjct:   145 -RSSNSRSSSIFDVPVWSMFCNGRKMGFAVRRKVTENDAVFLRMMQSVSVGAGVVPSEE- 202

Query:   228 GRKVGASEGELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLR 276
                    E ++LY+RARFERV GS DSE+F+M+NP  + G ELSIFLLR
Sbjct:   203 -------EDQMLYLRARFERVTGSSDSESFHMMNPGGSYGQELSIFLLR 244

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2011766 AT1G76610 "AT1G76610" [Arabidopsis thaliana (taxid:3702)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 90/185 (48%), Positives = 113/185 (61%)

Query:    94 LSMPTQLSVTPSLGRKVTGTLFGNRRGHVSFAVQDD--PRSEPVLLLELAMSTATLVKEM 151
             +S+ +  S +   G  VTGT +G+RRGHVSF +QDD  P S P+LLLELA+ TA L +EM
Sbjct:    60 VSVSSSTSSSDQTGVVVTGTFYGHRRGHVSFCLQDDTRPSSPPLLLLELAVPTAALAREM 119

Query:   152 ASGLVRIALECEKAGPVQTGKGRAGRLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTT 211
               G +RIAL  +          R   +F+ P+W+MYCNGRK G+A  R     D   L  
Sbjct:   120 EEGFLRIALRSKS--------NRRSSIFNVPVWSMYCNGRKFGFAVRRETTENDVGFLRL 171

Query:   212 VQSVSVGAGVIPVVEDGRKVGASEGELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELS 271
             +QSVSVGAGVIP            GE LY+RA+FERV GS DSE+F+M+N     G ELS
Sbjct:   172 MQSVSVGAGVIP-----------NGETLYLRAKFERVTGSSDSESFHMVNQGGGYGQELS 220

Query:   272 IFLLR 276
             IFL R
Sbjct:   221 IFLSR 225

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2065609 AT2G37880 "AT2G37880" [Arabidopsis thaliana (taxid:3702)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 85/172 (49%), Positives = 117/172 (68%)

Query:   110 VTGTLFGNRRGHVSFAVQDDPRS-EPVLLLELAMSTATLVKEMASGLVRIALECEKAGPV 168
             V GT+FG R+GHV F VQ D  S +P+LLLEL+++T+ LV EM SGLVR+ALEC    P 
Sbjct:    81 VIGTIFGRRKGHVWFCVQHDRLSVKPILLLELSIATSQLVHEMGSGLVRVALEC----PT 136

Query:   169 QTGKGRAGRLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDG 228
             +  + ++  L   P+WTM+CNGRK G+A  R+       +L  ++S++VGAGV+P    G
Sbjct:   137 RP-ELKSCLLRSVPVWTMFCNGRKLGFAVRRSANEETRMMLKRLESMTVGAGVLP---SG 192

Query:   229 RKVGASE----GELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLR 276
               +G S+     E++YMRA +E VVGS DSE+F+++NPD N   ELSIFLLR
Sbjct:   193 SGLGGSDESDTDEVMYMRANYEHVVGSSDSESFHLINPDANSAQELSIFLLR 244

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2165477 AT5G42680 "AT5G42680" [Arabidopsis thaliana (taxid:3702)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 84/189 (44%), Positives = 119/189 (62%)

Query:    91 CKWLSMPTQLSVTPSL-GRKVTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVK 149
             CK +++ ++    P L     TGT+FG R+G V  A+Q+DP   P+ ++EL M T+ L K
Sbjct:    57 CKMVNLLSRGHRRPLLKDYATTGTIFGFRKGRVFLAIQEDPHCLPIFIIELPMLTSALQK 116

Query:   150 EMASGLVRIALECEKAGPVQTGKGRAGRLFHEPMWTMYCNGRKCGYATSRA-CGGLDWHV 208
             EMAS  VRIALE E      T   R  ++  E +W +YCNGRK GY+  R      + +V
Sbjct:   117 EMASETVRIALESE------TKTSRK-KVLEEYVWGIYCNGRKIGYSIRRKNMSEEEMYV 169

Query:   209 LTTVQSVSVGAGVIPVVEDGRKVGASEGELLYMRARFERVVGSRDSEAFYMLNPDNNG-G 267
             +  ++ VS+GAGV+P      +   +EGE+ YMRARF+RV+GS+DSEA YM+NP+ +G G
Sbjct:   170 IDALRGVSMGAGVLPCKNQYDQ--ETEGEMTYMRARFDRVIGSKDSEALYMINPEGSGQG 227

Query:   268 PELSIFLLR 276
              ELSI+ LR
Sbjct:   228 TELSIYFLR 236

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.VI.1279.1 hypothetical protein (215 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	277
pfam04759	166	pfam04759, DUF617, Protein of unknown function, DU	6e-95
TIGR01570	161	TIGR01570, A_thal_3588, uncharacterized plant-spec	3e-80

>gnl|CDD|218249 pfam04759, DUF617, Protein of unknown function, DUF617

 Score =  276 bits (708), Expect = 6e-95
 Identities = 108/168 (64%), Positives = 126/168 (75%), Gaps = 3/168 (1%)

Query: 110 VTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGPVQ 169
           VTGTLFG+RRG V+ A+Q+DPRS P LLLELA+ T+ LV+EMASGLVRIALECEK  P  
Sbjct: 2   VTGTLFGHRRGRVTLAIQEDPRSPPALLLELAVPTSALVREMASGLVRIALECEKR-PGS 60

Query: 170 TGKGRAGRLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDGR 229
            GK     L  EP+WTMYCNGRK GYA  R     D  VL  ++ VS+GAGV+P    G 
Sbjct: 61  GGKAAGASLLEEPVWTMYCNGRKVGYAVRREATEDDLRVLELLRPVSMGAGVLP--GAGG 118

Query: 230 KVGASEGELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI 277
             G  +GE++YMRARFERVVGSRDSE+FYM+NPD NGGPELSIF LR+
Sbjct: 119 GGGGGDGEVMYMRARFERVVGSRDSESFYMINPDGNGGPELSIFFLRV 166

This family represents a conserved region in a number of uncharacterized plant proteins. Length = 166

>gnl|CDD|233472 TIGR01570, A_thal_3588, uncharacterized plant-specific domain TIGR01570

 Score =  238 bits (610), Expect = 3e-80
 Identities = 100/169 (59%), Positives = 121/169 (71%), Gaps = 9/169 (5%)

Query: 110 VTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGPVQ 169
           VTGT+FG R+G V+F +Q+D RS P+LLLELAM T+ L KEM+SGLVRIALECE     +
Sbjct: 1   VTGTIFGYRKGRVNFCIQEDRRSLPILLLELAMPTSVLQKEMSSGLVRIALECETRKQDK 60

Query: 170 TGKGRAGRLFHEPMWTMYCNGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDGR 229
             K     L  EP+WTMYCNGRK GYA  R+    D  VLT +  VSVGAGV+P    G+
Sbjct: 61  DSK-----LLSEPVWTMYCNGRKVGYAVKRSASEEDMTVLTALSKVSVGAGVLPC---GK 112

Query: 230 KVG-ASEGELLYMRARFERVVGSRDSEAFYMLNPDNNGGPELSIFLLRI 277
           ++G   E EL+YMRA FERVVGS+DSE+FYM+NP+ N G ELSIF LR 
Sbjct: 113 ELGGFDEDELMYMRASFERVVGSKDSESFYMINPEGNIGQELSIFFLRS 161

This model represents a region of about 170 amino acids found at the C-terminus of a family of plant proteins. These proteins typically have additional highly divergent N-terminal regions rich in low complexity sequence. PSI-BLAST reveals no clear similarity to any characterized protein. At least 12 distinct members are found in Arabidopsis thaliana. Length = 161

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	277
PF04759	166	DUF617: Protein of unknown function, DUF617; Inter	100.0
TIGR01570	161	A_thal_3588 uncharacterized plant-specific domain	100.0

>PF04759 DUF617: Protein of unknown function, DUF617; InterPro: IPR006460 This family of hypothetical plant proteins are defined by a region of about 170 amino acids found at the C terminus

Probab=100.00  E-value=7.9e-96  Score=629.35  Aligned_cols=166  Identities=67%  Similarity=1.094  Sum_probs=153.2

Q ss_pred             eeEEEEeccCCCceeeeeecCCCCCCeeeeeeccchHHHHHHhhcCceeEEeeeccCCCCCCCCCCCCcccccceEEEEe
Q 039343          109 KVTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGPVQTGKGRAGRLFHEPMWTMYC  188 (277)
Q Consensus       109 ~vTGTlFG~RrGrV~faiQedp~~~P~lLLELa~pT~~L~rEM~sGlvRIALEcek~~~~~~~~~~~~~Ll~epvWtmyC  188 (277)
                      ||||||||||||||+||||+||++.|+||||||+||++|+|||++|+|||||||||++... +.....+||+||+|+|||
T Consensus         1 rvtGTlFG~RrGrV~~aiQ~d~~s~P~lllELa~pT~~L~~EM~~GlvRIaLEc~k~~~~~-~~~~~~~Ll~ep~W~myC   79 (166)
T PF04759_consen    1 RVTGTLFGHRRGRVSFAIQEDPRSPPILLLELAMPTSALVREMASGLVRIALECEKRKGKS-KGAASGSLLEEPVWTMYC   79 (166)
T ss_pred             CcEEEEEecccceEEEEEecCCCCCCeEEEEecCcHHHHHHHhhcCeEEEEEEecCCCCCC-CcccccccccceeEEEEE
Confidence            6999999999999999999999999999999999999999999999999999999986321 112245699999999999


Q ss_pred             cCceeeeeeeecCCcccHHHHHhhceeeeccccccCcCCCCCCCCCCCceeeeeeecceeeccCCcceeeeecCCCCCCC
Q 039343          189 NGRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDGRKVGASEGELLYMRARFERVVGSRDSEAFYMLNPDNNGGP  268 (277)
Q Consensus       189 NGRK~GYAvRRe~t~~D~~VL~~l~~VSmGAGVLP~~~~~~~~~~~dGElmYMRA~FERVVGSkDSEsfyMinPdg~~Gp  268 (277)
                      |||||||||||+|||+||+||++|++|||||||||+..  .+.++.|||||||||+|||||||+|||||||||||||+||
T Consensus        80 NGrK~GyAvRRe~t~~d~~vL~~l~~VS~GAGVlP~~~--~~~~~~~gel~YMRA~FERVVGS~DSEsfyminPdg~~Gp  157 (166)
T PF04759_consen   80 NGRKVGYAVRREPTDDDLHVLELLRSVSMGAGVLPGGG--GGSGGGDGELMYMRARFERVVGSRDSESFYMINPDGNGGP  157 (166)
T ss_pred             CCceeeeeEEcCCCHHHHHHHHhhheeeecceeccCcc--ccCCCCCceEeeeeeeeeeeeccCCcceeEEECCCCCCCc
Confidence            99999999999999999999999999999999999832  2345679999999999999999999999999999999999


Q ss_pred             ceEEEEEeC
Q 039343          269 ELSIFLLRI  277 (277)
Q Consensus       269 ELSIFflRi  277 (277)
                      ||||||+||
T Consensus       158 ELSIFf~Rv  166 (166)
T PF04759_consen  158 ELSIFFLRV  166 (166)
T ss_pred             eEEEEEEeC
Confidence            999999997

These proteins have highly divergent N-terminal regions rich in low complexity sequence. PSI-BLAST reveals no clear similarity to any characterised protein. At least 12 distinct members are found in Arabidopsis thaliana (Mouse-ear cress).

>TIGR01570 A_thal_3588 uncharacterized plant-specific domain TIGR01570

Probab=100.00  E-value=2.4e-94  Score=617.37  Aligned_cols=160  Identities=61%  Similarity=1.023  Sum_probs=150.1

Q ss_pred             eEEEEeccCCCceeeeeecCCCCCCeeeeeeccchHHHHHHhhcCceeEEeeeccCCCCCCCCCCCCcccccceEEEEec
Q 039343          110 VTGTLFGNRRGHVSFAVQDDPRSEPVLLLELAMSTATLVKEMASGLVRIALECEKAGPVQTGKGRAGRLFHEPMWTMYCN  189 (277)
Q Consensus       110 vTGTlFG~RrGrV~faiQedp~~~P~lLLELa~pT~~L~rEM~sGlvRIALEcek~~~~~~~~~~~~~Ll~epvWtmyCN  189 (277)
                      |||||||||||||+||||+||++.|+||||||+||++|+|||++|+|||||||||++     ..++.+|++||+|+||||
T Consensus         1 vtGTlfG~RrgrV~~~iQ~dp~~~P~lllELa~pt~~L~~Em~~G~vRIaLEc~k~~-----~~~~~~ll~ep~W~myCN   75 (161)
T TIGR01570         1 VTGTIFGYRKGRVNFCIQEDRRSLPILLLELAMPTSVLQKEMSSGLVRIALECETRK-----QDKDSKLLSEPVWTMYCN   75 (161)
T ss_pred             CeEEEecCCCCcceeeecCCCCCCCeeeeeecCcHHHHHHHhhcCceeEEeeeeccc-----cCCCccceeeeeEEEEEC
Confidence            799999999999999999999999999999999999999999999999999999985     235678999999999999


Q ss_pred             CceeeeeeeecCCcccHHHHHhhceeeeccccccCcCCCCCCCCCC-CceeeeeeecceeeccCCcceeeeecCCCCCCC
Q 039343          190 GRKCGYATSRACGGLDWHVLTTVQSVSVGAGVIPVVEDGRKVGASE-GELLYMRARFERVVGSRDSEAFYMLNPDNNGGP  268 (277)
Q Consensus       190 GRK~GYAvRRe~t~~D~~VL~~l~~VSmGAGVLP~~~~~~~~~~~d-GElmYMRA~FERVVGSkDSEsfyMinPdg~~Gp  268 (277)
                      ||||||||||+|||+||+||++|++|||||||||+..+   .++.| ||||||||+|||||||||||||||||||||+||
T Consensus        76 Grk~GyAvRR~~t~~d~~vL~~l~~VS~GAGVlP~~~~---~~~~~~gel~YMRA~FERVVGS~DSEsfyminPdg~~gp  152 (161)
T TIGR01570        76 GRKVGYAVKRSASEEDMTVLTALSKVSVGAGVLPCGKE---LGGFDEDELMYMRASFERVVGSKDSESFYMINPEGNIGQ  152 (161)
T ss_pred             CceeeEeEecCCCHHHHHHHHhhheeeecceeccCCCC---CCCCCCceEEEEeeeeeEeccccCceeEEeECCCCCCCc
Confidence            99999999999999999999999999999999996432   23334 999999999999999999999999999999999


Q ss_pred             ceEEEEEeC
Q 039343          269 ELSIFLLRI  277 (277)
Q Consensus       269 ELSIFflRi  277 (277)
                      ||||||+|+
T Consensus       153 ELSIF~lR~  161 (161)
T TIGR01570       153 ELSIFFLRS  161 (161)
T ss_pred             eEEEEEEeC
Confidence            999999996

This model represents a region of about 170 amino acids found at the C-terminus of a family of plant proteins. These proteins typically have additional highly divergent N-terminal regions rich in low complexity sequence. PSI-BLAST reveals no clear similarity to any characterized protein. At least 12 distinct members are found in Arabidopsis thaliana.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00