Citrus Sinensis ID: 039737

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140----
Protein Sequence
MNNNNPPAPTPAPSKFNFSLWAKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEKVATVAENVSAEVAEILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKLVEPVVDKFVEEETK
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mnnnnppaptpapskfnfSLWAKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEKVATVAENVSAEVAeilpdhtkfkDAALFVERVAKETahdaqlteNFIHKVDEVKQDINDLEKLVEPVVDKFVEEETK
Flexible Loop (DISEMBL)
mnnnnppaptpapSKFNFSLWAKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEKVATVAENVSAEvaeilpdhtkFKDAALFVERVAKETahdaqltenfiHKVDEVKQDINdleklvepvvdkfveeetk
Low Complexity Region (SEG)
MnnnnppaptpapSKFNFSLWAKWILGSILSLLLPFWKQKWEKLKQIegeaemvieevekaaevvekvatvaenvSAEVAEILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKLVEPVVDKFVEEETK
Disordered region (IsUnstruct)
***************FNFSLWAKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEKVATVAENVSAEVAEILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKLVEPVVDK*******
Disordered Region (DISOPRED)
*****************FSLWAKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEKVATVAENVSAEVA***P**TKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKLVEP***********
Disordered Region (DISEMBL)
***********APSKFNFSLWAKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEKVATVAENVSAEVAEILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKLVEPVVDKFVEEETK
Disordered Region (DISPRO)
*****PPAPTPAPSKFNFSLWAKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEKVATVAENVSAEVAEILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKLVEPVVDKFVEE***
Transmembrane Helix (TMHMM)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNNNNPPAPTPAPSKFNFSLWAKWILGSILSLLLPFWKQKWEKxxxxxxxxxxxxxxxxxxxxxVEKVATVAENVSAEVAEILPDHTKFKDAALFVERVAKETAHDAQLxxxxxxxxxxxxxxxxxxxxxVEPVVDKFVEEETK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
255563194	221	conserved hypothetical protein [Ricinus	0.930	0.606	0.626	4e-42
224140761	157	predicted protein [Populus trichocarpa]	0.854	0.783	0.626	3e-37
224060433	196	predicted protein [Populus trichocarpa]	0.798	0.586	0.593	6e-36
357476253	212	hypothetical protein MTR_4g093820 [Medic	0.923	0.627	0.563	5e-35
225465762	210	PREDICTED: uncharacterized protein LOC10	0.888	0.609	0.565	2e-32
18397433	234	uncharacterized protein [Arabidopsis tha	0.965	0.594	0.471	4e-31
351723523	211	uncharacterized protein LOC100500336 [Gl	0.944	0.644	0.613	3e-30
297836042	232	hypothetical protein ARALYDRAFT_899622 [	0.951	0.590	0.482	4e-30
302142006	219	unnamed protein product [Vitis vinifera]	0.916	0.602	0.365	2e-15
351727054	180	uncharacterized protein LOC100305915 [Gl	0.659	0.527	0.547	1e-14

>gi|255563194|ref|XP_002522600.1| conserved hypothetical protein [Ricinus communis] gi|223538076|gb|EEF39687.1| conserved hypothetical protein [Ricinus communis]

 Score =  176 bits (445), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 84/134 (62%), Positives = 104/134 (77%)

Query: 11  PAPSKFNFSLWAKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEKVAT 70
           P P +FNF  WAKW+LGSILSL LPFWKQKWEKLK IEG+AE+V+EEVE  A VV K A 
Sbjct: 86  PDPPRFNFPTWAKWVLGSILSLFLPFWKQKWEKLKMIEGQAEIVLEEVETVAAVVGKAAM 145

Query: 71  VAENVSAEVAEILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKL 130
            AE  SAE AE LPD+ K K AAL VE ++K TAHDAQLT++FIHKVD +K D++DLE +
Sbjct: 146 AAEKFSAEEAEKLPDNGKLKKAALLVEGISKATAHDAQLTKDFIHKVDNLKHDLDDLETM 205

Query: 131 VEPVVDKFVEEETK 144
           VEP ++K +  +++
Sbjct: 206 VEPAIEKLIHHKSQ 219

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140761|ref|XP_002323747.1| predicted protein [Populus trichocarpa] gi|222866749|gb|EEF03880.1| predicted protein [Populus trichocarpa]

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 77/123 (62%), Positives = 104/123 (84%)

Query: 22  AKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEKVATVAENVSAEVAE 81
           AKWILGSILS+LLPFWKQK E+LK+IEGEA+++++EVE  AE +EKVATVAE VS EVAE
Sbjct: 33  AKWILGSILSILLPFWKQKREELKRIEGEADIIVDEVEHVAEEIEKVATVAEKVSEEVAE 92

Query: 82  ILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKLVEPVVDKFVEE 141
           +LP++ K K+ AL +E V K TAHDA+LT++FIHKVD VK DI+DL+ +V+PV++  V++
Sbjct: 93  VLPENGKLKETALLIEHVTKATAHDAKLTQDFIHKVDAVKHDIDDLKIMVDPVIETIVQQ 152

Query: 142 ETK 144
            ++
Sbjct: 153 NSR 155

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060433|ref|XP_002300197.1| predicted protein [Populus trichocarpa] gi|222847455|gb|EEE85002.1| predicted protein [Populus trichocarpa]

 Score =  155 bits (392), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 76/128 (59%), Positives = 100/128 (78%), Gaps = 13/128 (10%)

Query: 17  NFSLWAKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEKVATVAENVS 76
           NF  WAKWILG+ILS+LLPFW+Q+W+KL++IE             AEVVEKVATVAE VS
Sbjct: 80  NFPRWAKWILGTILSILLPFWQQEWKKLRRIE-------------AEVVEKVATVAEKVS 126

Query: 77  AEVAEILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKLVEPVVD 136
            EVAE+LP++ K K+ AL +E V+K TAHDA+LT++FIHKVD V+ DI+DLE +VEPV+D
Sbjct: 127 EEVAEVLPENGKLKETALLMEAVSKATAHDAKLTQDFIHKVDAVRHDIDDLETMVEPVID 186

Query: 137 KFVEEETK 144
           K V++ ++
Sbjct: 187 KLVQQNSQ 194

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357476253|ref|XP_003608412.1| hypothetical protein MTR_4g093820 [Medicago truncatula] gi|217075092|gb|ACJ85906.1| unknown [Medicago truncatula] gi|355509467|gb|AES90609.1| hypothetical protein MTR_4g093820 [Medicago truncatula] gi|388504568|gb|AFK40350.1| unknown [Medicago truncatula]

 Score =  152 bits (384), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/133 (56%), Positives = 98/133 (73%)

Query: 11  PAPSKFNFSLWAKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEKVAT 70
           PA   F FS W KWI+ S+LS +LP W Q W KL++IEGEAE+VIE VEK AEVVEKVAT
Sbjct: 80  PASKFFAFSSWVKWIVCSLLSFMLPLWSQSWGKLERIEGEAEIVIEGVEKVAEVVEKVAT 139

Query: 71  VAENVSAEVAEILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKL 130
           VAE VS ++AE LP+  K K  A+ VE  +K+  H AQ+TE FIHKV++V  D+ +LE  
Sbjct: 140 VAEKVSEDLAETLPEDAKLKKVAVVVESASKQAVHGAQITEEFIHKVEKVTNDMEELESF 199

Query: 131 VEPVVDKFVEEET 143
           VEP++DK V++++
Sbjct: 200 VEPLIDKIVKKQS 212

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465762|ref|XP_002266756.1| PREDICTED: uncharacterized protein LOC100265791 [Vitis vinifera] gi|296087443|emb|CBI34032.3| unnamed protein product [Vitis vinifera]

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/138 (56%), Positives = 100/138 (72%), Gaps = 10/138 (7%)

Query: 7   PAPTPAPSKFN-FSLWAKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVV 65
           PA  PA S ++ F  WAK + GSILSLLLPF K  W+KL ++EGEAE+V+ EVEK     
Sbjct: 79  PATVPAASAWSIFPSWAKVLAGSILSLLLPFLK--WDKLMRLEGEAEIVVAEVEK----- 131

Query: 66  EKVATVAENVSAEVAEILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQDIN 125
             VATV E VS +VA ILPD +K KDAAL VE ++K TA DA+LTE+FI KVD +KQD+ 
Sbjct: 132 --VATVTEKVSGDVANILPDKSKLKDAALLVEHISKVTAEDAELTEHFIQKVDVLKQDVQ 189

Query: 126 DLEKLVEPVVDKFVEEET 143
           DLE++VEP++    E+E+
Sbjct: 190 DLERMVEPIIHNISEKES 207

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18397433|ref|NP_565361.1| uncharacterized protein [Arabidopsis thaliana] gi|20198188|gb|AAM15449.1| Expressed protein [Arabidopsis thaliana] gi|330251185|gb|AEC06279.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 66/140 (47%), Positives = 104/140 (74%), Gaps = 1/140 (0%)

Query: 1   MNNNNPPAPTPAPSKFNFSLWAKWILGSILSLLLPFWK-QKWEKLKQIEGEAEMVIEEVE 59
           ++N++   P+P    FNF  W +W++GS +SL+L FW  ++ +KLK+IEGEAE+V+E VE
Sbjct: 73  VSNDSKMQPSPPNQWFNFPSWGRWVIGSAISLVLSFWNNERLQKLKRIEGEAELVVEGVE 132

Query: 60  KAAEVVEKVATVAENVSAEVAEILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDE 119
             AE+VEKVAT  + ++ E+AE LP+  K K  AL +E +++  AH+A LT++F+HKV++
Sbjct: 133 AVAEMVEKVATATDEMAEEMAEKLPEKNKLKQVALVLEHISEVAAHEAHLTQDFLHKVEK 192

Query: 120 VKQDINDLEKLVEPVVDKFV 139
           V QDI+DLE +++P++DK V
Sbjct: 193 VTQDIDDLEAMIKPLIDKKV 212

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723523|ref|NP_001236514.1| uncharacterized protein LOC100500336 [Glycine max] gi|255630071|gb|ACU15389.1| unknown [Glycine max]

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/137 (61%), Positives = 103/137 (75%), Gaps = 1/137 (0%)

Query: 5   NPPAPTPAPSKFNF-SLWAKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAE 63
            P AP PA   F F   W +W+LG +LSLLLPFWK  W KL+ I+ EAE V+EE E  A+
Sbjct: 74  QPEAPAPASKIFTFFPHWLRWVLGMVLSLLLPFWKSYWRKLQIIQAEAEFVVEEAEAVAK 133

Query: 64  VVEKVATVAENVSAEVAEILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQD 123
           VVEKVATVAE VS +VAE+LP++ K + AAL VER +KE AHDAQLTE FIHKV+E+K D
Sbjct: 134 VVEKVATVAEKVSEDVAEMLPENGKLRKAALVVERASKEAAHDAQLTEEFIHKVEELKND 193

Query: 124 INDLEKLVEPVVDKFVE 140
           ++DLE  VEPV+DK V+
Sbjct: 194 LDDLEAFVEPVIDKIVK 210

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836042|ref|XP_002885903.1| hypothetical protein ARALYDRAFT_899622 [Arabidopsis lyrata subsp. lyrata] gi|297331743|gb|EFH62162.1| hypothetical protein ARALYDRAFT_899622 [Arabidopsis lyrata subsp. lyrata]

 Score =  136 bits (342), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 67/139 (48%), Positives = 103/139 (74%), Gaps = 2/139 (1%)

Query: 2   NNNNPPAPTPAPSKFNFSLWAKWILGSILSLLLPFWK-QKWEKLKQIEGEAEMVIEEVEK 60
           +NN+   P+P    FNFS W +W++GS +SL+L FW  ++ +KLK+IEGEAE+V+E VE 
Sbjct: 73  SNNSNMQPSPPNQWFNFS-WGRWVIGSAISLVLSFWNNERIQKLKRIEGEAELVVEGVEA 131

Query: 61  AAEVVEKVATVAENVSAEVAEILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDEV 120
            AE+VEKVAT  + ++ E+AE LP+  K K  A  +E +++  AH+A LT++F+HKV++V
Sbjct: 132 VAEMVEKVATATDEMAEEMAEKLPEKNKLKQVASVLEHISEVAAHEAHLTQDFLHKVEKV 191

Query: 121 KQDINDLEKLVEPVVDKFV 139
            QDI+DLE +++P++DK V
Sbjct: 192 TQDIDDLEAMIKPLIDKKV 210

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142006|emb|CBI19209.3| unnamed protein product [Vitis vinifera]

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 2/134 (1%)

Query: 3   NNNPPAPTPAPSKFNFSLWAKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAA 62
           +  P A  P+    N   W  WI+G +LS+++P WK K   L Q++ E E  +   E+ A
Sbjct: 74  STQPGASLPSGPPTNS--WKNWIIGMLLSMVVPLWKYKLGPLLQLKNEVETAMNTTEQIA 131

Query: 63  EVVEKVATVAENVSAEVAEILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQ 122
           E +E VA   E V+ ++   LP+  K +  A FVE VAKETA  A L +  I KV+++++
Sbjct: 132 ETIESVAEKVEQVADDIGNHLPEGGKLRQVADFVENVAKETAKGAHLVDAAIEKVEDIEK 191

Query: 123 DINDLEKLVEPVVD 136
            ++ L + VE V D
Sbjct: 192 KVDSLVEEVEQVAD 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727054|ref|NP_001238683.1| uncharacterized protein LOC100305915 [Glycine max] gi|255626967|gb|ACU13828.1| unknown [Glycine max]

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/95 (54%), Positives = 66/95 (69%)

Query: 8   APTPAPSKFNFSLWAKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEK 67
           A  PA     FS W +W+LG +LSLLLPFWK  W+KL+ +E EAE V+EE E  A++VEK
Sbjct: 80  ALAPASKILTFSHWLRWVLGMVLSLLLPFWKPYWKKLQIVEVEAEFVVEEAETVAKMVEK 139

Query: 68  VATVAENVSAEVAEILPDHTKFKDAALFVERVAKE 102
           VA V E VS +VAE+LP+  K + AAL VER +K 
Sbjct: 140 VAMVTEKVSEDVAEMLPEDGKLRKAALVVERASKR 174

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
TAIR|locus:505006244	234	AT2G14095 "AT2G14095" [Arabido	0.895	0.551	0.374	1.5e-21

TAIR|locus:505006244 AT2G14095 "AT2G14095" [Arabidopsis thaliana (taxid:3702)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 49/131 (37%), Positives = 77/131 (58%)

Query:    16 FNFSLWAKWILGSILSLLLPFWK-QKWEKLKQIXXXXXXXXXXXXXXXXXXXXXXXXXXX 74
             FNF  W +W++GS +SL+L FW  ++ +KLK+I                           
Sbjct:    88 FNFPSWGRWVIGSAISLVLSFWNNERLQKLKRIEGEAELVVEGVEAVAEMVEKVATATDE 147

Query:    75 XSAEVAEILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKLVEPV 134
              + E+AE LP+  K K  AL +E +++  AH+A LT++F+HKV++V QDI+DLE +++P+
Sbjct:   148 MAEEMAEKLPEKNKLKQVALVLEHISEVAAHEAHLTQDFLHKVEKVTQDIDDLEAMIKPL 207

Query:   135 VDKFVEE-ETK 144
             +DK V   ETK
Sbjct:   208 IDKKVANAETK 218


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.133   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      144       104   0.00091  102 3  11 22  0.43    30
                                                     29  0.50    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  568 (60 KB)
  Total size of DFA:  130 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.33u 0.09s 12.42t   Elapsed:  00:00:00
  Total cpu time:  12.33u 0.10s 12.43t   Elapsed:  00:00:00
  Start:  Sat May 11 14:20:12 2013   End:  Sat May 11 14:20:12 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	144
KOG2629	300	consensus Peroxisomal membrane anchor protein (per	92.73
COG1392	217	Phosphate transport regulator (distant homolog of	92.6
PF12325	120	TMF_TATA_bd: TATA element modulatory factor 1 TATA	91.33
PRK15048	553	methyl-accepting chemotaxis protein II; Provisiona	89.41
PF09682	108	Holin_LLH: Phage holin protein (Holin_LLH); InterP	87.57
PF06103	90	DUF948: Bacterial protein of unknown function (DUF	86.82
PF05529	192	Bap31: B-cell receptor-associated protein 31-like	85.37
PF06103	90	DUF948: Bacterial protein of unknown function (DUF	84.27
PF11044	49	TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 tran	82.61
PF10046	99	BLOC1_2: Biogenesis of lysosome-related organelles	81.38
PRK15041	554	methyl-accepting chemotaxis protein I; Provisional	80.9
COG4768	139	Uncharacterized protein containing a divergent ver	80.41

>KOG2629 consensus Peroxisomal membrane anchor protein (peroxin) [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=92.73  E-value=6.4  Score=34.79  Aligned_cols=30  Identities=20%  Similarity=0.149  Sum_probs=22.7

Q ss_pred             CChhHHHHH-----HHHHHHHHHhhhhHHHHHHHH
Q 039737           16 FNFSLWAKW-----ILGSILSLLLPFWKQKWEKLK   45 (144)
Q Consensus        16 ~~~p~W~~w-----vlG~il~~~vPf~~~kw~~l~   45 (144)
                      +....|.-|     +++||.|.+.+|||+|-.|..
T Consensus        78 ~~~~rwrdy~vmAvi~aGi~y~~y~~~K~YV~P~~  112 (300)
T KOG2629|consen   78 NVLRRWRDYFVMAVILAGIAYAAYRFVKSYVLPRF  112 (300)
T ss_pred             cchhhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence            345789877     678888999999998765543

>COG1392 Phosphate transport regulator (distant homolog of PhoU) [Inorganic ion transport and metabolism]

Probab=92.60  E-value=1.7  Score=35.95  Aligned_cols=23  Identities=13%  Similarity=0.442  Sum_probs=18.7

Q ss_pred             HHHHHHHHHhHHHHHHhHHHHHH
Q 039737          107 AQLTENFIHKVDEVKQDINDLEK  129 (144)
Q Consensus       107 A~~ae~~I~KVeei~~~id~~e~  129 (144)
                      ++++..++++|+.++++.|++..
T Consensus       146 ~~~~~~i~~eI~~~E~e~D~i~~  168 (217)
T COG1392         146 ADRLLEIIKEIEALEHECDDIQR  168 (217)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHH
Confidence            66778899999999999996554

>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []

Probab=91.33  E-value=5.1  Score=30.60  Aligned_cols=90  Identities=19%  Similarity=0.434  Sum_probs=71.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchHHHHHHHHHHHHHHHhhHHHHHHHH-------
Q 039737           42 EKLKQIEGEAEMVIEEVEKAAEVVEKVATVAENVSAEVAEILPDHTKFKDAALFVERVAKETAHDAQLTENFI-------  114 (144)
Q Consensus        42 ~~l~~ie~evE~vie~vE~vaEvVE~VAe~tEKvAeevA~~lPengkLk~aA~~VE~vae~v~~dA~~ae~~I-------  114 (144)
                      ..++++++++-..-+.       +..+..-=+.+++++.....+|..++.....+..+-.++.+==++-+.++       
T Consensus        23 s~lr~~E~E~~~l~~e-------l~~l~~~r~~l~~Eiv~l~~~~e~~~~~~~~~~~L~~el~~l~~ry~t~LellGEK~   95 (120)
T PF12325_consen   23 SQLRRLEGELASLQEE-------LARLEAERDELREEIVKLMEENEELRALKKEVEELEQELEELQQRYQTLLELLGEKS   95 (120)
T ss_pred             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence            4788888888665333       56666777888889999999999999888888888888877666666665       


Q ss_pred             HhHHHHHHhHHHHHHhhhhHHHHH
Q 039737          115 HKVDEVKQDINDLEKLVEPVVDKF  138 (144)
Q Consensus       115 ~KVeei~~~id~~e~~Vepvid~~  138 (144)
                      +.|++++.||.||+.|..--|+.+
T Consensus        96 E~veEL~~Dv~DlK~myr~Qi~~l  119 (120)
T PF12325_consen   96 EEVEELRADVQDLKEMYREQIDQL  119 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh
Confidence            578889999999999998888765

The proteins bind to the TATA element of some RNA polymerase II promoters and repress their activity. by competing with the binding of TATA binding protein. TMF1_TATA_bd is the most conserved part of the TMFs []. TMFs are evolutionarily conserved golgins that bind Rab6, a ubiquitous ras-like GTP-binding Golgi protein, and contribute to Golgi organisation in animal [] and plant cells. The Rab6-binding domain appears to be the same region as this C-terminal family [].

>PRK15048 methyl-accepting chemotaxis protein II; Provisional

Probab=89.41  E-value=12  Score=33.19  Aligned_cols=21  Identities=5%  Similarity=0.404  Sum_probs=9.2

Q ss_pred             HHHHHhHHHHHHhHHHHHHhh
Q 039737          111 ENFIHKVDEVKQDINDLEKLV  131 (144)
Q Consensus       111 e~~I~KVeei~~~id~~e~~V  131 (144)
                      +.+.+.++++.+..++...++
T Consensus       343 ~~~~~~~~~l~~~~~~I~~i~  363 (553)
T PRK15048        343 DGVVKTMHEIADSSKKIADII  363 (553)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            334444444444444444444

>PF09682 Holin_LLH: Phage holin protein (Holin_LLH); InterPro: IPR010026 This entry represents the Bacteriophage LL-H, Orf107, holin protein

Probab=87.57  E-value=9.2  Score=28.01  Aligned_cols=72  Identities=21%  Similarity=0.176  Sum_probs=41.8

Q ss_pred             HHHHHHHHH----HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-CcchHHHHHHH
Q 039737           22 AKWILGSIL----SLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEKVATVAENVSAEVAEILPD-HTKFKDAALFV   96 (144)
Q Consensus        22 ~~wvlG~il----~~~vPf~~~kw~~l~~ie~evE~vie~vE~vaEvVE~VAe~tEKvAeevA~~lPe-ngkLk~aA~~V   96 (144)
                      ..+++++++    ++++.+|.++.-++++-.-       ..|+...+.+-+|..+-..++.++..-.. ..|+.+|..+|
T Consensus         5 ~~~ii~~~~~i~l~ii~~~~~~~~~~~l~~k~-------~~e~~~~~~~~vak~Av~aveq~~~~~~~G~~K~~~A~~~v   77 (108)
T PF09682_consen    5 TNIIITVALSIVLAIIAGIIVKYVIKYLKKKA-------GGEKLVKILEIVAKIAVNAVEQVAKEGGKGEEKKAEAVQYV   77 (108)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence            344555444    4455666665555544332       34455666677777777777887777643 25666666555


Q ss_pred             HHHH
Q 039737           97 ERVA  100 (144)
Q Consensus        97 E~va  100 (144)
                      ...-
T Consensus        78 ~~~L   81 (108)
T PF09682_consen   78 KERL   81 (108)
T ss_pred             HHHH
Confidence            4443

The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].

>PF06103 DUF948: Bacterial protein of unknown function (DUF948); InterPro: IPR009293 This family consists of bacterial sequences several of which are thought to be general stress proteins

Probab=86.82  E-value=5.8  Score=27.57  Aligned_cols=35  Identities=3%  Similarity=0.152  Sum_probs=21.0

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHhHHH
Q 039737           92 AALFVERVAKETAHDAQLTENFIHKVDEVKQDIND  126 (144)
Q Consensus        92 aA~~VE~vae~v~~dA~~ae~~I~KVeei~~~id~  126 (144)
                      .......+.++|.+..+.++.+.+.|.++.+-+.+
T Consensus        52 ll~~~n~l~~dv~~k~~~v~~~~~~v~~~g~~v~~   86 (90)
T PF06103_consen   52 LLHNTNELLEDVNEKLEKVDPVFEAVADLGESVSE   86 (90)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            34445556666666666666666666666654443

>PF05529 Bap31: B-cell receptor-associated protein 31-like ; InterPro: IPR008417 Bap31 is a polytopic integral protein of the endoplasmic reticulum membrane and a substrate of caspase-8

Probab=85.37  E-value=16  Score=28.63  Aligned_cols=36  Identities=25%  Similarity=0.310  Sum_probs=22.1

Q ss_pred             HHHHHHHHHHhhhhH--HHHHHHHHHHHHHHHHHHHHH
Q 039737           24 WILGSILSLLLPFWK--QKWEKLKQIEGEAEMVIEEVE   59 (144)
Q Consensus        24 wvlG~il~~~vPf~~--~kw~~l~~ie~evE~vie~vE   59 (144)
                      |+-|+++++.+=.+|  +.-..+.+++++.+.....++
T Consensus       105 YIsGf~LfL~l~I~r~~~li~~l~~~~~~~~~~~kq~~  142 (192)
T PF05529_consen  105 YISGFALFLSLVIRRVHSLIKELIKLEEKLEALKKQAE  142 (192)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            788999887666655  223456666666655444433

Bap31 is cleaved within its cytosolic domain, generating pro-apoptotic p20 Bap31 [].; GO: 0006886 intracellular protein transport, 0005783 endoplasmic reticulum, 0016021 integral to membrane

>PF06103 DUF948: Bacterial protein of unknown function (DUF948); InterPro: IPR009293 This family consists of bacterial sequences several of which are thought to be general stress proteins

Probab=84.27  E-value=11  Score=26.06  Aligned_cols=48  Identities=13%  Similarity=0.256  Sum_probs=23.0

Q ss_pred             HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039737           33 LLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEKVATVAENVSAEVA   80 (144)
Q Consensus        33 ~vPf~~~kw~~l~~ie~evE~vie~vE~vaEvVE~VAe~tEKvAeevA   80 (144)
                      +++++++-...+..+...++.+-+.++....-+.+.-.-+..+.++|-
T Consensus        17 l~~~l~~l~~~l~~~~~ti~~l~~~~~~i~~e~~~ll~~~n~l~~dv~   64 (90)
T PF06103_consen   17 LIKVLKKLKKTLDEVNKTIDTLQEQVDPITKEINDLLHNTNELLEDVN   64 (90)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            455555444445555555544444444444444444444444444444

>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses

Probab=82.61  E-value=3  Score=27.94  Aligned_cols=34  Identities=26%  Similarity=0.536  Sum_probs=21.6

Q ss_pred             hhHHHHHHHHHHHHHHhhhhHH--HHHHHHHHHHHH
Q 039737           18 FSLWAKWILGSILSLLLPFWKQ--KWEKLKQIEGEA   51 (144)
Q Consensus        18 ~p~W~~wvlG~il~~~vPf~~~--kw~~l~~ie~ev   51 (144)
                      +|+|..|+++.++.+.+=.|-+  ...+.++|+++-
T Consensus         1 mp~wlt~iFsvvIil~If~~iGl~IyQkikqIrgKk   36 (49)
T PF11044_consen    1 MPTWLTTIFSVVIILGIFAWIGLSIYQKIKQIRGKK   36 (49)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            6899999998877654432322  133567777653

The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.

>PF10046 BLOC1_2: Biogenesis of lysosome-related organelles complex-1 subunit 2 ; InterPro: IPR019269 This entry represents a family of proteins that play a role in cellular proliferation, as well as in the biogenesis of specialised organelles of the endosomal-lysosomal system []

Probab=81.38  E-value=8.9  Score=27.72  Aligned_cols=47  Identities=19%  Similarity=0.386  Sum_probs=37.7

Q ss_pred             cchHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHhHHHHHHhhhh
Q 039737           87 TKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKLVEP  133 (144)
Q Consensus        87 gkLk~aA~~VE~vae~v~~dA~~ae~~I~KVeei~~~id~~e~~Vep  133 (144)
                      .++++.+.-+..-++....--...+..+++++.|++++..||..|.-
T Consensus        38 ~~~~~~~~~l~~~~~~l~~k~~~l~~~l~~Id~Ie~~V~~LE~~v~~   84 (99)
T PF10046_consen   38 KKMKDIAAGLEKNLEDLNQKYEELQPYLQQIDQIEEQVTELEQTVYE   84 (99)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35666677777777777777788889999999999999999888763

>PRK15041 methyl-accepting chemotaxis protein I; Provisional

Probab=80.90  E-value=43  Score=30.27  Aligned_cols=25  Identities=4%  Similarity=0.412  Sum_probs=12.3

Q ss_pred             HHHHHHHHhHHHHHHhHHHHHHhhh
Q 039737          108 QLTENFIHKVDEVKQDINDLEKLVE  132 (144)
Q Consensus       108 ~~ae~~I~KVeei~~~id~~e~~Ve  132 (144)
                      +.++.+.+.++++.+..++...+++
T Consensus       342 ~~~~~~~~~~~~l~~~~~~I~~i~~  366 (554)
T PRK15041        342 KVVDNVVQTMRDISTSSQKIADIIS  366 (554)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3334455555555555554444444

>COG4768 Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain [General function prediction only]

Probab=80.41  E-value=9  Score=30.58  Aligned_cols=48  Identities=19%  Similarity=0.347  Sum_probs=29.3

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHhHHHHHHhhhhHHHHH
Q 039737           91 DAALFVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKLVEPVVDKF  138 (144)
Q Consensus        91 ~aA~~VE~vae~v~~dA~~ae~~I~KVeei~~~id~~e~~Vepvid~~  138 (144)
                      +++..++.+...++--.|.++.++||.-.+-+|+..=.+-++|+.+.+
T Consensus        35 evakt~~~l~~qv~gi~~eT~~Ll~K~N~L~eDvq~Kv~tld~vf~aV   82 (139)
T COG4768          35 EVAKTLKGLTSQVDGITHETEELLHKTNTLAEDVQGKVATLDPVFDAV   82 (139)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHhHHHHHH
Confidence            334444555555555666677777777777666665555666766654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	144
3zx6_A	341	HAMP, methyl-accepting chemotaxis protein I; signa	82.94

>3zx6_A HAMP, methyl-accepting chemotaxis protein I; signaling, HAMP domain, TSR receptor, fusion; 2.65A {Archaeoglobus fulgidus}

Probab=82.94  E-value=18  Score=29.50  Aligned_cols=31  Identities=3%  Similarity=0.349  Sum_probs=15.2

Q ss_pred             HHHhhHHHHHHHHHhHHHHHHhHHHHHHhhh
Q 039737          102 ETAHDAQLTENFIHKVDEVKQDINDLEKLVE  132 (144)
Q Consensus       102 ~v~~dA~~ae~~I~KVeei~~~id~~e~~Ve  132 (144)
                      .+.+-.+..+.+.+.+..+.+..+++..+++
T Consensus       123 ~~~~~~~~~~~~~~~~~~l~~~~~~I~~i~~  153 (341)
T 3zx6_A          123 TAQRGGKVVDNVVQTMRDISTSSQKIADIIS  153 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3333334444555555555555555555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00