Citrus Sinensis ID: 039898

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320--
Protein Sequence
LEINERPLKRPLLDFEKLSISSSSGIEELKARKVFVQHVETATTSEANIDIVQSFVPNFTDVLKTKSEERRLAFKKDNRHDQNLSKARQQQEVLAKNARFEQIWRSRKGHKEELHHKELREMCHFYDVVRVDGEEKSNEVQRDMSLEDQRLLSSYLPMLREFLPGAAAEIESDMWAYLSKQDDYVYDYYAVNDDMNVDEDASSPFPLVQVDDEEFYDGPDESEYDSEDSNAEDNPRNEYPDEISDEQEEEEEEEEEEEVDEDGVESKATENSEDESERAGIASRDIDRFLEDEIYYDDFENDDHCFDNLDNEENDADGEDWR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccEEEEEccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccEEEEEccccccHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccEEEEEEEccccccccccccccccEEEccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHccccccccccccccccEEEEEEEEEcccHHHHHHHHHHHccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccccccccHHHHHHHHHHccEEEEccccccccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
leinerplkrplldfeklsissssgIEELKARKVFVQHVETATTSEANIDIVQSFVPNFTDVLKTKSEERRLAFkkdnrhdqnLSKARQQQEVLAKNARFEQIWRSRKGHKEELHHKELREMCHFYDVVrvdgeeksnevqrdmsleDQRLLSSYLPMLREFLPGAAAEIESDMWAYLSkqddyvydyyavnddmnvdedasspfplvqvddeefydgpdeseydsedsnaednprneypdeisdeqeeeeeeeeeeevdedgveskatensedeseragiasrdidrfledeiyyddfenddhcfdnldneendadgedwr
Flexible Loop (DISEMBL)
leinerplkrplldfeklsissssgieelKARKVFVQHVETattseanidivqsfVPNFTDVLKTKSEERRLafkkdnrhdqnlsKARQQQEVLAKNARFEQIWRSRKGHKEELHHKELREMCHFYDVVRVDGEEKsnevqrdmsleDQRLLSSYLPMLREFLPGAAAEIESDMWAYLSKQDDYVYDYYAVNDDMNVDEDASSPFPLVQVDDEEFYDGPDEseydsedsnaednprneyPDEISDEQeeeeeeeeeeevdedgveskatensedeseragiasrdidRFLEDEIYYDDFENDDHCFDNLDNeendadgedwr
Low Complexity Region (SEG)
LEINERPLKRPLLDFEklsissssgieelkARKVFVQHVETATTSEANIDIVQSFVPNFTDVLKTKSEERRLAFKKDNRHDQNLSKARQQQEVLAKNARFEQIWRSRKGhkeelhhkelREMCHFYDVVRVDGEEKSNEVQRDMSLEDQRLLSSYLPMLREFLPGAAAEIESDMWAYLSKQddyvydyyavnddmnvdEDASSPFPLVQVDDEEFYDGPDESEYDSEDSNAEDNPRNeypdeisdeqeeeeeeeeeeevdedgveSKATENSEDESERAGIASRDIDRFLEDEIYYDDFENDDHCFDNLDNEENDADGEDWR
Disordered region (IsUnstruct)
****************************LKARKVFVQHVETATTSEANIDIVQSFVPNFTDVL************************************FEQIW***********HKELREMCHFYDVVRV*******************LLSSYLPMLREFLPGAAAEIESDMWAYLSKQDDYVYDYYAVNDDM*****************************************************************************************DIDRFLEDEIYYDDFENDDHCFD***************
Disordered Region (DISOPRED)
*********RPLLD*******************VFVQHVETATTSEANIDIVQSFV****************************************************************EMCHFYDV********************QRLLSSYLPMLREFLPG*****************DYVYDYYAVNDDMNVDEDASSPFPLVQVDDEEFYDG************************************************************************EDEIYYDDFEND********************
Disordered Region (DISEMBL)
LEINERPLKRPLLDFEKLSISSSSGIEELKARKVFVQHVETATTSEANIDIVQSFVPNFTDVLKTKSEERRLAFKKDNRHDQNLSKARQQQEVLAKNARFEQIWRSRKGHKEELHHKELREMCHFYDVVRVDGEEKSNEVQRDMSLEDQRLLSSYLPMLREFLPGAAAEIESDMWAYLSKQDDYVYDYYAVNDDMNVDEDASSPFPLVQVDDEEFYDG**************************************************************IASRDIDRFLEDEIYYDDFENDDHCFDNLDNE**********
Disordered Region (DISPRO)
*********RP*****K**********ELKARKVFVQHVETATTSEANIDIVQSFVPNFT****TKSEERRLAFKKDNRHDQNLSKARQQQEVLAKNARFEQIWRSRKGHKEELHHKELREMCHFYDVVRVDGEEKSNEVQRDMSLEDQRLLSSYLPMLREFLPGAAAEIESDMWAYLSKQDDYVYDYYAVNDDMNVDEDASSPFPLVQVDDEEFYDGPDESEYDSEDSNAEDNPRNEYPDEI*************************************IASRDIDRFLEDEIYYDDFENDDHCFDN**************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
LEINERPLKRPLLDFEKLSISSSSGIEELKARKVFVQHVETATTSEANIDIVQSFVPNFTDVLKTKSEERRLAFKKDNRHDQNLSKARQQQEVLAKNARFEQIWRSRKGHKEELHHKELREMCHFYDVVRVDGEEKSNEVQRDMSLEDQRLLSSYLPMLREFLPGAAAEIESDMWAYLSKQDDYVYDYYAVNDDMNVDEDASSPFPLVQVDDEEFYDGPDESEYDSEDSNAEDNPxxxxxxxxxxxxxxxxxxxxxEEVDEDGVESKATENSEDESERAGIASRDIDRFLEDEIYYDDFENDDHCFDNLDNEENDADGEDWR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
297745798	355	unnamed protein product [Vitis vinifera]	0.962	0.873	0.604	5e-89
255558144	363	conserved hypothetical protein [Ricinus	0.742	0.658	0.631	1e-79
356572740	356	PREDICTED: uncharacterized protein LOC10	0.745	0.674	0.6	2e-74
449493008	365	PREDICTED: uncharacterized protein LOC10	0.965	0.852	0.540	3e-74
449444138	365	PREDICTED: uncharacterized protein LOC10	0.968	0.854	0.541	2e-73
30684530	346	RNA-directed DNA methylation 4 [Arabidop	0.723	0.673	0.568	9e-69
297826429	351	predicted protein [Arabidopsis lyrata su	0.723	0.663	0.56	2e-67
224145486	352	predicted protein [Populus trichocarpa]	0.763	0.698	0.540	3e-66
357516729	356	hypothetical protein MTR_8g063090 [Medic	0.751	0.679	0.564	2e-65
2347194	294	hypothetical protein [Arabidopsis thalia	0.624	0.683	0.481	5e-51

>gi|297745798|emb|CBI15854.3| unnamed protein product [Vitis vinifera]

 Score =  333 bits (855), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 200/331 (60%), Positives = 240/331 (72%), Gaps = 21/331 (6%)

Query: 1   LEINERPLKRPLLDFEKLSISSSSGIEELKARKVFVQHVETATTSEANIDIVQSFVPNFT 60
           LEINERPLKRPLLD EKLSIS SSG EE+K +KV VQH+ET +TSEA  +I+QSF PN  
Sbjct: 33  LEINERPLKRPLLDLEKLSISDSSGKEEVKTKKVLVQHLETVSTSEAAYNILQSFAPNSD 92

Query: 61  DVL--KTKSEERRLAFKKDNRHDQNLSKARQQQEVLAKNARFEQIWRSRKGHKEELHHKE 118
             L  KTKS+ERR  FKK+N  DQ L KARQ+QE+LAKNARFEQIWRSRKG  E    K 
Sbjct: 93  GALDSKTKSDERRHTFKKENIQDQLLVKARQEQEILAKNARFEQIWRSRKGKNEAAQDKA 152

Query: 119 LREMCHFYDVVRVDGEEKSNEVQRDMSLEDQRLLSSYLPMLREFLPGAAAEIESDMWAYL 178
           L EMCH YDVVRVD EE S++VQ DMSLEDQ +L +YLP++R+F+P AAAEIESD+ AY+
Sbjct: 153 LHEMCHLYDVVRVDVEETSSQVQEDMSLEDQMILCNYLPLIRDFIPSAAAEIESDIHAYM 212

Query: 179 SKQ---DDYVYDYYAVNDDMNV-DEDASSPFPLVQVD-DEEFYDGPDESEYDSEDSNAED 233
           SKQ   D+YVYD YAV DDMN+ DEDA +PFPLVQVD D+EFY GP ESE++S+DSNAED
Sbjct: 213 SKQASPDEYVYDLYAVKDDMNITDEDALNPFPLVQVDEDDEFYAGPPESEFESDDSNAED 272

Query: 234 NPRNEYPDEISDEQEEEEEEEEEEEVDEDGVESKATENSEDESERAGIASRDIDRF--LE 291
           NP N+YPDE + E EE+ +    +  DE G         E +S+ A   S D +    LE
Sbjct: 273 NPLNDYPDEETSEDEEDSDSRASD--DESG---------EPKSDSASDRSLDSENLVQLE 321

Query: 292 DEIYYDDFENDDHCFDNLDNEENDADGEDWR 322
           DEI  DD EN+  C  + D+ + D + EDWR
Sbjct: 322 DEI-NDDCENESDCDYDDDDGDVDDNTEDWR 351

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558144|ref|XP_002520100.1| conserved hypothetical protein [Ricinus communis] gi|223540728|gb|EEF42289.1| conserved hypothetical protein [Ricinus communis]

 Score =  303 bits (775), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 156/247 (63%), Positives = 192/247 (77%), Gaps = 8/247 (3%)

Query: 1   LEINERPLKRPLLDFEKLSISSSSG---IEELKARKVFVQHVETATTSEANIDIVQSFVP 57
           LEINERP KRPL DF+KLSIS  S    +EE K +KVFV H+ T ++S+   DI+QSFVP
Sbjct: 38  LEINERPSKRPLFDFQKLSISDDSAHKKVEESKTKKVFVHHITTVSSSDVITDILQSFVP 97

Query: 58  NFTDVLKTKSEERRLAFKKDNRHDQNLSKARQQQEVLAKNARFEQIWRSRKGHKEELHHK 117
           +  + +  KSEER+  FKKDN+ +Q LSKARQ QE+ A+NARFEQIWRSR+G+KE    +
Sbjct: 98  SSAEAIP-KSEERKQTFKKDNKQEQLLSKARQSQEISAQNARFEQIWRSRRGNKEASDDR 156

Query: 118 ELREMCHFYDVVRVDGEEKSNEVQRD--MSLEDQRLLSSYLPMLREFLPGAAAEIESDMW 175
            L +MCHFYDVVRVD   +S  +Q    MSLEDQ++LSSYLP+LREF+P AAA+IE D+ 
Sbjct: 157 ALHDMCHFYDVVRVDVGGRSTVMQEQEVMSLEDQKILSSYLPLLREFIPSAAADIECDIN 216

Query: 176 AYLSKQDDYVYDYYAVNDDMNV-DEDASSPFPLVQVDDEEFYDGP-DESEYDSEDSNAED 233
             +SK DDYVYDYY V DDM + DED+ SPFPLVQV+DE+FYDGP DESEY+SEDSNAE 
Sbjct: 217 NCMSKPDDYVYDYYTVRDDMGMGDEDSLSPFPLVQVEDEDFYDGPDDESEYESEDSNAEH 276

Query: 234 NPRNEYP 240
           +PRN+YP
Sbjct: 277 HPRNDYP 283

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572740|ref|XP_003554524.1| PREDICTED: uncharacterized protein LOC100797972 [Glycine max]

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 150/250 (60%), Positives = 196/250 (78%), Gaps = 10/250 (4%)

Query: 1   LEINERPLKRPLLDFEKLSISSSSGIE-ELKARKVFVQHVETATTSEANIDIVQSFV--- 56
           LEINERPLKRPLLDF  LSISS+S  + E   +KVFVQHVET ++SE   DIVQSFV   
Sbjct: 33  LEINERPLKRPLLDFGNLSISSNSAQKVEFYNKKVFVQHVETISSSEVTFDIVQSFVDLG 92

Query: 57  PNFTDVLKTKSEERRLAFKKDNRHDQNLSKARQQQEVLAKNARFEQIWRSRKGHKEELHH 116
            +     K+K +ER+  F +DN+ DQ LSKA+Q++E LAK+ARFEQIW++RKG+K   H 
Sbjct: 93  SSGASDSKSKIKERKKFFNRDNKQDQLLSKAKQEKESLAKDARFEQIWKNRKGNKGTAHD 152

Query: 117 KELREMCHFYDVVRVDGEEKSNEVQR-DMSLEDQRLLSSYLPMLREFLPGAAAEIESDMW 175
           K L+EMCH YD+VR+D EEK+ EVQ+ +MSLEDQRLLSSYLP+LREF+P AAAE+E+D+ 
Sbjct: 153 KALQEMCHLYDIVRIDNEEKNKEVQQEEMSLEDQRLLSSYLPLLREFIPNAAAEVETDLI 212

Query: 176 AYL---SKQDDYVYDYYAVNDDMNVD-EDASSPFPLVQVDDEE-FYDGPDESEYDSEDSN 230
           A L   SK+++YVYD Y V D+M+++ +D+S  +PLVQVD+EE +YDG   S+Y+S+DSN
Sbjct: 213 AQLVGHSKEENYVYDLYTVKDEMDINIDDSSCSYPLVQVDEEEDYYDGTQHSDYESDDSN 272

Query: 231 AEDNPRNEYP 240
           AE+NP N+YP
Sbjct: 273 AENNPLNDYP 282

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449493008|ref|XP_004159166.1| PREDICTED: uncharacterized protein LOC101229521 [Cucumis sativus]

 Score =  285 bits (728), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 181/335 (54%), Positives = 233/335 (69%), Gaps = 24/335 (7%)

Query: 1   LEINERPLKRPLLDFEKLSISSSSGIEELKARKVFVQHVETATTSEANIDIVQSFV-PNF 59
           LEINERPLKRPLLDFE LSIS +   EELK +K+FVQHVET  +S+A +DIVQSFV P+ 
Sbjct: 38  LEINERPLKRPLLDFENLSISETLHKEELKTKKIFVQHVETLRSSDATVDIVQSFVAPDA 97

Query: 60  TDVLKT--KSEERRLAFKKD-NRHDQNLSKARQQQEVLAKNARFEQIWRSRKGHKEELHH 116
              ++   K+EERR  FK++ +R DQ L KARQ+QE+ AKNARFEQIWRSRKG K+E   
Sbjct: 98  ASTIENNLKNEERRRNFKREISRQDQLLVKARQEQELAAKNARFEQIWRSRKGVKDE-KD 156

Query: 117 KELREMCHFYDVVRVDGEEKSNEV--QRDMSLEDQRLLSSYLPMLREFLPGAAAEIESDM 174
            +LR++ H YD+VR+D  E S+E   Q  MSLEDQ +LSSYLP+LREF+P AAAEIESD+
Sbjct: 157 DQLRDVYHIYDIVRLDTNEISSESPKQEQMSLEDQSMLSSYLPLLREFIPSAAAEIESDI 216

Query: 175 WAYLSKQ----DDYVYDYYAVNDDMNVDE-DASSPFPLVQVDDEEFYDGPDESEYDSEDS 229
            A + KQ    DDYVYDYY V +D+ + E DAS PFPL+QVDD + +DGP +S+Y+++DS
Sbjct: 217 DANMMKQNLPVDDYVYDYYTVKNDVEIAEDDASHPFPLIQVDDLD-HDGPSDSDYETDDS 275

Query: 230 NAEDNPRNEYPDEISDEQEEEEEEEEEEEVDEDGVESKATENSEDESERAGIASRDIDRF 289
           NAE+NP  +YPDE     EE E     +E+ ED  + K +  S D  E        ++ +
Sbjct: 276 NAENNPCFDYPDE-----EELESTSSNDEL-EDSDDEKQSSESNDVEEDELSEEEKVELY 329

Query: 290 LEDEIYYDDFENDDHCFDNLDNEENDA--DGEDWR 322
            EDEI YDDF+ +D   D+ D + N    +GEDWR
Sbjct: 330 -EDEI-YDDFDEEDGA-DSFDYDSNVGHDEGEDWR 361

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444138|ref|XP_004139832.1| PREDICTED: uncharacterized protein LOC101214310 [Cucumis sativus]

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 181/334 (54%), Positives = 231/334 (69%), Gaps = 22/334 (6%)

Query: 1   LEINERPLKRPLLDFEKLSISSSSGIEELKARKVFVQHVETATTSEANIDIVQSFV-PNF 59
           LEINERPLKRPLLDFE LSIS +   EELK +K+FVQHVET  +S+A +DIVQSFV P+ 
Sbjct: 38  LEINERPLKRPLLDFENLSISETLHKEELKTKKIFVQHVETLRSSDATVDIVQSFVAPDA 97

Query: 60  TDVLKT--KSEERRLAFKKD-NRHDQNLSKARQQQEVLAKNARFEQIWRSRKGHKEELHH 116
              ++   K+EERR  FK++ +R DQ L KARQ+QE+ AKNARFEQIWRSRKG K+E   
Sbjct: 98  ASTIENNLKNEERRRNFKREISRQDQLLVKARQEQELAAKNARFEQIWRSRKGVKDE-KD 156

Query: 117 KELREMCHFYDVVRVDGEEKSNEV--QRDMSLEDQRLLSSYLPMLREFLPGAAAEIESDM 174
            +LR++ H YD+VR+D  E S+E   Q  MSLEDQ +LSSYLP+LREF+P AAAEIESD+
Sbjct: 157 DQLRDVYHIYDIVRLDTNEISSESPKQEQMSLEDQSMLSSYLPLLREFIPSAAAEIESDI 216

Query: 175 WAYLSKQ----DDYVYDYYAVNDDMNVDE-DASSPFPLVQVDDEEFYDGPDESEYDSEDS 229
            A + KQ    DDYVYDYY V +D+ + E DAS PFPL+QVDD + +DGP +S+Y+++DS
Sbjct: 217 DANMMKQNLPVDDYVYDYYTVKNDVEIAEDDASHPFPLIQVDDLD-HDGPSDSDYETDDS 275

Query: 230 NAEDNPRNEYPDEISDEQEEEEEEEEEEEVDEDGVESKATENSEDESERAGIASRDIDRF 289
           NAE+NP  +YPDE     EE E     +E+ ED  + K +  S D  E        ++ +
Sbjct: 276 NAENNPCFDYPDE-----EELESTSSNDEL-EDSDDEKQSSESNDVEEDELSEEEKVELY 329

Query: 290 LEDEIYYD-DFENDDHCFDNLDNEENDADGEDWR 322
            EDEIY D D E+    FD   N  +D +GEDWR
Sbjct: 330 -EDEIYDDCDEEDGADSFDYDSNVGHD-EGEDWR 361

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30684530|ref|NP_180587.2| RNA-directed DNA methylation 4 [Arabidopsis thaliana] gi|26450032|dbj|BAC42136.1| unknown protein [Arabidopsis thaliana] gi|28973065|gb|AAO63857.1| unknown protein [Arabidopsis thaliana] gi|330253271|gb|AEC08365.1| RNA-directed DNA methylation 4 [Arabidopsis thaliana]

 Score =  266 bits (680), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 142/250 (56%), Positives = 186/250 (74%), Gaps = 17/250 (6%)

Query: 1   LEINERPLKRPLLDFEKLSISSS-----SGIEELKARKVFVQHVETATTSEANIDIVQSF 55
           LEINERPLKRP LDF KLSIS S     S  E++K +KV V+H+ET T SE   DI+ SF
Sbjct: 36  LEINERPLKRPTLDFSKLSISDSGERGPSVAEDVKPKKVLVRHLETVTDSETTADIIHSF 95

Query: 56  VP---NFTDVLKTKSEERRLAFKKDNRHDQNLSKARQQQEVLAKNARFEQIWRSRKGHKE 112
                N     K K EER++AFKKDNR +Q L+K+ Q+Q++ ++NARFEQIWRSRKG+KE
Sbjct: 96  FESDHNEKSCSKGKFEERKIAFKKDNRKEQRLTKSVQKQQIASENARFEQIWRSRKGNKE 155

Query: 113 ELHHKELREMCHFYDVVRVDGEEKSNEVQRDMSLEDQRLLSSYLPMLREFLPGAAAEIES 172
            +H K     CHF+DV+RVD EE+ +  Q   SLEDQ++L+S+LP+LRE +P AA EIE+
Sbjct: 156 GIHEK-----CHFFDVIRVDTEERRDNAQEFTSLEDQKMLASFLPLLRECIPTAAEEIEA 210

Query: 173 DMWAYLSKQDDYVYDYYAVNDDMNVDEDAS-SPFPLVQVDDEE-FYDGPDESEYDSEDSN 230
           D+ +  S  ++YVYDYYAVN++M++ ED+S + FPLV V+DEE F DG DES+YDSEDSN
Sbjct: 211 DIQS--SHTEEYVYDYYAVNEEMDISEDSSKNQFPLVIVEDEEEFCDGSDESDYDSEDSN 268

Query: 231 AEDNPRNEYP 240
           AED+P+ +YP
Sbjct: 269 AEDHPKTDYP 278

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826429|ref|XP_002881097.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297326936|gb|EFH57356.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 140/250 (56%), Positives = 186/250 (74%), Gaps = 17/250 (6%)

Query: 1   LEINERPLKRPLLDFEKLSISSS-----SGIEELKARKVFVQHVETATTSEANIDIVQS- 54
           LEINE+PLKRP L   KLSIS S     S  E++K +KV V+H+ET T SE   DI+ S 
Sbjct: 37  LEINEKPLKRPTLGLSKLSISDSGERGPSVAEDVKPKKVLVRHLETVTDSETTADIIHSL 96

Query: 55  FVPNFTD--VLKTKSEERRLAFKKDNRHDQNLSKARQQQEVLAKNARFEQIWRSRKGHKE 112
           F  + T+    K KSEER+ AFKKDNR +Q L+K+ QQQ++ AKNARFEQIWRSRKG+KE
Sbjct: 97  FESDLTEKSCSKGKSEERKFAFKKDNRKEQRLTKSVQQQQIAAKNARFEQIWRSRKGNKE 156

Query: 113 ELHHKELREMCHFYDVVRVDGEEKSNEVQRDMSLEDQRLLSSYLPMLREFLPGAAAEIES 172
            +H +     CHF+DV+RVD EE+ +  Q   SLEDQ++L+S+LP+LRE +P AA EIE+
Sbjct: 157 GIHDR-----CHFFDVIRVDAEERQDSEQEFTSLEDQKMLASFLPLLRECIPTAAEEIEA 211

Query: 173 DMWAYLSKQDDYVYDYYAVNDDMNVDEDAS-SPFPLVQV-DDEEFYDGPDESEYDSEDSN 230
           D+ +  S  ++YVYDYYAVN++M++ ED++ + FPLV V D+EEF DG DES++DSEDSN
Sbjct: 212 DIQS--SHNEEYVYDYYAVNEEMDISEDSTKNQFPLVIVEDEEEFCDGSDESDFDSEDSN 269

Query: 231 AEDNPRNEYP 240
           AED+P+ +YP
Sbjct: 270 AEDHPKTDYP 279

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224145486|ref|XP_002325660.1| predicted protein [Populus trichocarpa] gi|222862535|gb|EEF00042.1| predicted protein [Populus trichocarpa]

 Score =  258 bits (659), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 147/272 (54%), Positives = 192/272 (70%), Gaps = 26/272 (9%)

Query: 1   LEINERPLKRPLLDFEKLSISSSS---GIEELKARKVFVQHVETATTSEANIDIVQSFVP 57
           LEINE+P K+ +LD EKLSIS+++    +EELKA+KV V+HVET T+ +  ++IVQSF  
Sbjct: 35  LEINEKPTKKAMLDLEKLSISNNTVDVQVEELKAKKVLVKHVETVTSMDTTMEIVQSFAS 94

Query: 58  NFTDVLKTKSEERRLAFKKDNRHDQNLSKARQQQEVLAKNARFEQIWRSRKGHKEELHHK 117
           N   V+    EE++   KK ++ +Q LS++R+ QEVLA +ARFEQIWRSR+G K     K
Sbjct: 95  NSAHVV----EEQKRTIKKYSKQEQILSRSRRNQEVLASDARFEQIWRSRRGDKGASEDK 150

Query: 118 ELREMCHFYDVVRVDGEEKSNEVQ--RDMSLEDQRLLSSYLPMLREFLPGAAAEIESDMW 175
            L +MC FYDVVRV  EE  NEVQ     SLEDQ++LSSYLP+LREFLP A AE+ESD+ 
Sbjct: 151 ALHDMCSFYDVVRV--EESFNEVQELEVASLEDQKILSSYLPLLREFLPSAVAEVESDIH 208

Query: 176 AYLSKQDDYVYDYY------------AVNDDMNVDE-DASSPFPLVQVDDEEFYDGP-DE 221
           AYLS Q    +D               V DDM++D+ + +SPFPLV+V++E+FYDGP DE
Sbjct: 209 AYLSNQGS-AFDAIPLDVDDYVYDYYTVKDDMDIDDIETASPFPLVKVEEEDFYDGPDDE 267

Query: 222 SEYDSEDSNAEDNPRNEYPDEISDEQEEEEEE 253
           SEYD++DSNAED+PRN+YPDE S +  E E E
Sbjct: 268 SEYDTDDSNAEDHPRNDYPDEASLDDHESESE 299

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357516729|ref|XP_003628653.1| hypothetical protein MTR_8g063090 [Medicago truncatula] gi|355522675|gb|AET03129.1| hypothetical protein MTR_8g063090 [Medicago truncatula]

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/250 (56%), Positives = 185/250 (74%), Gaps = 8/250 (3%)

Query: 1   LEINERPLKRPLLDFEKLSISSSSGIE---ELKARKVFVQHVETATTSEANIDIVQSFV- 56
           LEINERP KRPLLDF  LSIS S       E+  +KV VQHVET ++S+  +DIVQSFV 
Sbjct: 34  LEINERPFKRPLLDFGNLSISQSQSSSQNVEIHNKKVLVQHVETISSSDVTLDIVQSFVE 93

Query: 57  PNFTDVLKTKSE--ERRLAFKKDNRHDQNLSKARQQQEVLAKNARFEQIWRSRKGHKEEL 114
           P      ++K    ER+  FKK  + DQ L KA+Q+++  AK+ARFEQIW+SRK +K   
Sbjct: 94  PGSRSASESKPNVVERKNFFKKVKKQDQLLVKAKQEKQFSAKDARFEQIWKSRKVNKATA 153

Query: 115 HHKELREMCHFYDVVRVDGEEKSNEVQR-DMSLEDQRLLSSYLPMLREFLPGAAAEIESD 173
               L+E+C FYD+VRVD EE   EVQ+ D+SLEDQRLLSS+LP+LRE +P AAAE+E+D
Sbjct: 154 DENVLQEICQFYDIVRVDSEENIKEVQQEDISLEDQRLLSSFLPLLREVIPNAAAEVEAD 213

Query: 174 MWAYLSKQDDYVYDYYAVNDDMNVDEDASSPFPLVQVDDEEFYDGPDESEYDSEDSNAED 233
           +  + SKQ+DYVYD Y V D+  V+E++S  +PLVQVD+E+++DGPD S+Y+++DSNAED
Sbjct: 214 ISDH-SKQEDYVYDLYTVTDETIVEENSSHSYPLVQVDEEDYFDGPDNSDYETDDSNAED 272

Query: 234 NPRNEYPDEI 243
           NP N+YPDEI
Sbjct: 273 NPMNDYPDEI 282

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2347194|gb|AAC16933.1| hypothetical protein [Arabidopsis thaliana]

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 114/237 (48%), Positives = 160/237 (67%), Gaps = 36/237 (15%)

Query: 6   RPLKRPLLDFEKLSISSSSGIEELKARKVFVQHVETATTSEANIDIVQSFVPNFTDVLKT 65
           R + + LLD    S++     E++K +KV V+H+ET T SE   DI+ SF          
Sbjct: 24  RKVGQSLLDAFCPSVA-----EDVKPKKVLVRHLETVTDSETTADIIHSFF--------- 69

Query: 66  KSEERRLAFKKDNRHDQNLSKARQQQEVLAKNARFEQIWRSRKGHKEELHHKELREMCHF 125
                        R +Q L+K+ Q+Q++ ++NARFEQIWRSRKG+KE +H K     CHF
Sbjct: 70  -------------RKEQRLTKSVQKQQIASENARFEQIWRSRKGNKEGIHEK-----CHF 111

Query: 126 YDVVRVDGEEKSNEVQRDMSLEDQRLLSSYLPMLREFLPGAAAEIESDMWAYLSKQDDYV 185
           +DV+RVD EE+ +  Q   SLEDQ++L+S+LP+LRE +P AA EIE+D+ +  S  ++YV
Sbjct: 112 FDVIRVDTEERRDNAQEFTSLEDQKMLASFLPLLRECIPTAAEEIEADIQS--SHTEEYV 169

Query: 186 YDYYAVNDDMNVDEDAS-SPFPLVQVDDEE-FYDGPDESEYDSEDSNAEDNPRNEYP 240
           YDYYAVN++M++ ED+S + FPLV V+DEE F DG DES+YDSEDSNAED+P+ +YP
Sbjct: 170 YDYYAVNEEMDISEDSSKNQFPLVIVEDEEEFCDGSDESDYDSEDSNAEDHPKTDYP 226

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
TAIR|locus:2065764	346	RDM4 "RNA-directed DNA methyla	0.925	0.861	0.409	3.1e-51

TAIR|locus:2065764 RDM4 "RNA-directed DNA methylation 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 132/322 (40%), Positives = 176/322 (54%)

Query:     1 LEINERPLKRPLLDFEXXXXXXXXXXXXXXA-----RKVFVQHVETATTSEANIDIVQSF 55
             LEINERPLKRP LDF               A     +KV V+H+ET T SE   DI+ SF
Sbjct:    36 LEINERPLKRPTLDFSKLSISDSGERGPSVAEDVKPKKVLVRHLETVTDSETTADIIHSF 95

Query:    56 VP---NFTDVLKTKSEERRLAFKKDNRHDQNLSKARQQQEVLAKNARFEQIWRSRKGXXX 112
                  N     K K EER++AFKKDNR +Q L+K+ Q+Q++ ++NARFEQIWRSRKG   
Sbjct:    96 FESDHNEKSCSKGKFEERKIAFKKDNRKEQRLTKSVQKQQIASENARFEQIWRSRKGNKE 155

Query:   113 XXXXXXXREMCHFYDVVRVDGEEKSNEVQRDMSLEDQRLLSSYLPMLREFLPGAAAEIES 172
                     E CHF+DV+RVD EE+ +  Q   SLEDQ++L+S+LP+LRE +P AA EIE+
Sbjct:   156 GI-----HEKCHFFDVIRVDTEERRDNAQEFTSLEDQKMLASFLPLLRECIPTAAEEIEA 210

Query:   173 DMWAYLSKQXXXXXXXXXXXXXXXXXEDAS-SPFPLVQVDDEE-FYDGPDESEYDSEDSN 230
             D+ +  S                   ED+S + FPLV V+DEE F DG DES+YDSEDSN
Sbjct:   211 DIQS--SHTEEYVYDYYAVNEEMDISEDSSKNQFPLVIVEDEEEFCDGSDESDYDSEDSN 268

Query:   231 AEDNPRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKATENSEDESERAGIASRDIDRFL 290
             AED+P+                             S+A++ S+DE      + R +   L
Sbjct:   269 AEDHPKTDYPEEEEEEEEEDDDDDDDDESEEEK--SEASDESDDEET----SKRHVRSVL 322

Query:   291 EDEIYYDDFENDDHCFDNLDNE 312
              D+  +DD+  D + +   D E
Sbjct:   323 GDD-EFDDYAEDVYGYSESDEE 343


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.130   0.370    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      322       253   0.00083  114 3  11 23  0.39    34
                                                     32  0.47    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  599 (64 KB)
  Total size of DFA:  196 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  22.99u 0.09s 23.08t   Elapsed:  00:00:21
  Total cpu time:  22.99u 0.09s 23.08t   Elapsed:  00:00:22
  Start:  Thu May  9 17:01:21 2013   End:  Thu May  9 17:01:43 2013

GO:0005634 "nucleus" evidence=ISM

GO:0006306 "DNA methylation" evidence=IGI;IMP

GO:0006342 "chromatin silencing" evidence=IGI;IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IGI

GO:0032502 "developmental process" evidence=IGI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IMP

GO:0009791 "post-embryonic development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00023978001 SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (355 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	322
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	2e-04
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	9e-04
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	9e-04
COG5406	1001	COG5406, COG5406, Nucleosome binding factor SPN, S	0.004

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 42.7 bits (100), Expect = 2e-04
 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 211 DDEEFYDGPDESEYDSEDSNAEDNPRNEYPDEISDEQEEEEEEEEEEE 258
            DE+  DG   S  D  DS  E+    E  +E  +E+EEEEEEEE EE
Sbjct: 847 QDEKGVDGGGGS--DGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEE 892

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 40.7 bits (95), Expect = 9e-04
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 11/52 (21%)

Query: 210 VDDEEFYDGPDESEYDSEDSNAEDNPRNEYPDEISDEQEEEEEEEEEEEVDE 261
           VD     DG D  E + E+   E+           +E+EEEEEEEEEEE +E
Sbjct: 852 VDGGGGSDGGDSEEEEEEEEEEEE-----------EEEEEEEEEEEEEENEE 892

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 40.7 bits (95), Expect = 9e-04
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)

Query: 198 DEDASSPFPLVQVDDEEFYDGPDESEYDSEDS-NAEDNPRNEYPDEISDEQEEEEEEEEE 256
           ++D        Q DD E  D   E E ++E+   A+ + +       SD  + EEEEEEE
Sbjct: 811 EKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGDSEEEEEEE 870

Query: 257 EEVDEDGVESKATENSEDESE 277
           EE +E+  E +  E  E+E+E
Sbjct: 871 EEEEEEEEEEEEEEEEEEENE 891

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|227693 COG5406, COG5406, Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]

 Score = 38.5 bits (89), Expect = 0.004
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 5/85 (5%)

Query: 199  EDASSPFPLVQVDDEEFYDGPDESEY-----DSEDSNAEDNPRNEYPDEISDEQEEEEEE 253
            ED    F +V  DDE      + SEY     D  D   ED   +E  +++S+++ E +  
Sbjct: 916  EDGGWSFLMVGSDDESDESEEEVSEYEASSDDESDETDEDEESDESSEDLSEDESENDSS 975

Query: 254  EEEEEVDEDGVESKATENSEDESER 278
            +EE+  D D +ESKA  +S     R
Sbjct: 976  DEEDGEDWDELESKAAYDSRPGKRR 1000

Length = 1001

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	322
PF08574	77	DUF1762: Protein of unknown function (DUF1762); In	99.5
KOG4852	265	consensus Uncharacterized conserved protein [Funct	99.24

>PF08574 DUF1762: Protein of unknown function (DUF1762); InterPro: IPR013883 Iwr1 is involved in transcription from polymerase II promoters; it interacts with with most of the polymerase II subunits []

Probab=99.50  E-value=2.8e-14  Score=112.39  Aligned_cols=61  Identities=43%  Similarity=0.552  Sum_probs=37.7

Q ss_pred             CCCCceEEEEEeecCCC---C------CcccCCCCCCc------ccCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCC
Q 039898          180 KQDDYVYDYYAVNDDMN---V------DEDASSPFPLV------QVDDEEFYDGPDESEYDSEDSNAEDNPRNEYPDEI  243 (322)
Q Consensus       180 ~e~dYVYDiY~~~~~~~---~------di~sv~~~~~~------lv~ded~~~~~ee~~~DddDSNaE~nwrNDYPDEe  243 (322)
                      .+.+||||||++.....   +      +|+.|..+...      ++.+.+   ...+.+.|++|||||+|||||||+++
T Consensus         2 ~~~dYVYD~Y~~~~~~~~~~~~~~~~~~ig~l~~~~~~~~~~~~~~~~~~---~d~~~~~DdeDSNaE~~y~NDYPDeE   77 (77)
T PF08574_consen    2 SDDDYVYDVYYREDVPEDLETANVPPDDIGYLVIVEEDDDLWDDLYDDDD---DDEEWDDDDEDSNAENNYRNDYPDEE   77 (77)
T ss_pred             CCCCEEEEEEEEcCCCCccccccCCccccceEEeecccchhhhhccCCCc---ccccCCCCcCcccCCCCCCCCCCCCC
Confidence            35799999999754421   1      33333322211      112211   11134689999999999999999985

Deletion of this protein results in hypersensitivity to the K1 killer toxin []

>KOG4852 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.24  E-value=1e-12  Score=122.91  Aligned_cols=161  Identities=18%  Similarity=0.132  Sum_probs=89.8

Q ss_pred             ceeEEEeeeecCccchhhhhhccccchhhhhhhhHHHHhhhcccchhhhhhhHHHHHHHHHhhccceeeeccccCCcccc
Q 039898           34 VFVQHVETATTSEANIDIVQSFVPNFTDVLKTKSEERRLAFKKDNRHDQNLSKARQQQEVLAKNARFEQIWRSRKGHKEE  113 (322)
Q Consensus        34 ~VFklv~TV~sqe~~~d~vqs~v~~~i~~~k~K~~e~~~rpk~~sk~~ri~sklR~~~~~~r~e~RYriV~~~R~~~~~~  113 (322)
                      .||..|+||.++..   ++|++...-.   |.--+..-+.+.+..  .-++..++|..+..-++.|+++++         
T Consensus        43 ~v~~~va~v~d~~~---pvq~~~~eva---r~~De~nq~gfvk~~--alg~~~~~qEse~n~~~p~~~vsn---------  105 (265)
T KOG4852|consen   43 AVLPSVAYVFDIYH---PVQIHDDEVA---RYNDEKNQIGFVKII--ALGDLALDQESEPNEARPDDEVSN---------  105 (265)
T ss_pred             hhhhhhhhhhcccc---hhhhhhHHHH---hcccchhhhhhHHHH--HhhhhccccccccCcCCchhhhcc---------
Confidence            89999999999988   8998864311   000000001111111  223344555555555666666665         


Q ss_pred             chhhhhcccceEEEEEeecCcccchhhhccCcchhhHHHhhcchhhhcccCCcchhhhhhhhhhccCCCCceEEEEEeec
Q 039898          114 LHHKELREMCHFYDVVRVDGEEKSNEVQRDMSLEDQRLLSSYLPMLREFLPGAAAEIESDMWAYLSKQDDYVYDYYAVND  193 (322)
Q Consensus       114 ~~~~~~~~~fqlyDiV~~E~e~k~~~~~~~~s~dpe~ILCN~~pMLRE~L~~s~~~~~~di~~~~~~e~dYVYDiY~~~~  193 (322)
                              .++++..|+.+++....++..+ +.++.++.|| ..+|+|.=    .++...    ++.+.+-         
T Consensus       106 --------~~rllq~v~~ege~~~aSag~~-SSd~dIv~~~-~eai~e~e----~~p~v~----~n~eqd~---------  158 (265)
T KOG4852|consen  106 --------DERLLQNVYPEGEDDDASAGFG-SSDEDIVALG-EEAIIEVE----KSPFVS----WNDEQDQ---------  158 (265)
T ss_pred             --------cchhhcccCccCCCCchhhccC-CCCCchhhhh-HHHHHhhc----cCcccc----ccchhhh---------
Confidence                    5667777776665554443344 7899999999 66777611    111100    0101000         


Q ss_pred             CCCC-CcccCCCCCC--cccCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCCC
Q 039898          194 DMNV-DEDASSPFPL--VQVDDEEFYDGPDESEYDSEDSNAEDNPRNEYPDEIS  244 (322)
Q Consensus       194 ~~~~-di~sv~~~~~--~lv~ded~~~~~ee~~~DddDSNaE~nwrNDYPDEes  244 (322)
                         | .+....++.+  .++..++  + ..+.++|.+|||.|||||||||++|+
T Consensus       159 ---ie~~d~~~~~~~e~el~dldd--~-~~d~~DdedDsNsENnwrnDypeeEs  206 (265)
T KOG4852|consen  159 ---IEGSDDNGYHDVEEELGDLDD--R-LGDKSDDEDDSNSENNWRNDYPEEES  206 (265)
T ss_pred             ---hcccccccccccchhhccccc--c-cCCcccccccccccccccccCccccc
Confidence               2 2222233322  2444443  2 23345677799999999999999987

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00