Citrus Sinensis ID: 040802

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
Protein Sequence
MGKCGSHMMRRRMIMVTVHMMIVVMMIKNYAYADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTKNAKLAIFRPKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQQGTLENLYWKSLGCDSCSGETSVCINNTVCAVPNLKCRNHGGPIDCNIGIQLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAVPGHPQ
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEcccccEEEcccccccccccccccccccEEEEEEEEccEEEEEEEccccccccccccEEEEEEEcccccccccEEEEcccEEEEEEEEEEEEEccEEEEEEEcccccccccccccEEEcccEEEEcccccccccccEEccccEEEEEEEEccccccccHHHHHHcccccHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEccccEEEEEEEEccccHccccccccccccHHcccccccEEEEEEccccEEEEEEEccccccccccccEEEEEEcccEccccccEEEEccccEEEEEEEEEEEccccEEEEEEEcccccccccccEEEEccccccccccHcccccccccccEEEEEEEcccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MGKCGSHMMRRRMIMVTVHMMIVVMMIKNYayadtniifnpcddskvkrwdgftfglafstkeaffldqiqlspcdsrlalptknaklaifrpkvdeislltiddtnfnpilsggYVVAFAGrkyaarsaptlvadsthTVTNLTLVLEFQQGTLENLYwkslgcdscsgetsvcinntvcavpnlkcrnhggpidcnigiqltfsgtdEKRQVLNSWYEVENLRKLSLYDLYsnvaeavpghpq
Flexible Loop (DISEMBL)
mgkcgshmmrRRMIMVTVHMMIVVMMIKNYAYADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPtknaklaifrpkVDEISLLTiddtnfnpiLSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQQGTLENLYWKSLGCDSCSGETSVCINNTVCAVPNLKCRNHGGPIDCNIGIQLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAVPGHPQ
Low Complexity Region (SEG)
MGKCGSHmmrrrmimvtvhmmivvmmiKNYAYADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTKNAKLAIFRPKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQQGTLENLYWKSLGCDSCSGETSVCINNTVCAVPNLKCRNHGGPIDCNIGIQLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAVPGHPQ
Disordered region (IsUnstruct)
************MIMVTVHMMIVVMMIKNYAYADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTKNAKLAIFRPKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQQGTLENLYWKSLGCDSCSGETSVCINNTVCAVPNLKCRNHGGPIDCNIGIQLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNVA********
Disordered Region (DISOPRED)
*********R**MIMVTVHMMIVVMMIKNYAYADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTKNAKLAIFRPKVDEISLLTIDDT*FNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQQGTLENLYWKSLGCDSCSGETSVCINNTVCAVPNLKCRNHGGPIDCNIGIQLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNVA********
Disordered Region (DISEMBL)
********MRRRMIMVTVHMMIVVMMIKNYAYADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTKNAKLAIFRPKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQQGTLENLYWKSLGCDSCSGETSVCINNTVCAVPNLKCRNHGGPIDCNIGIQLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAVPGHPQ
Disordered Region (DISPRO)
*GKCGSHMMRRRMIMVTVHMMIVVMMIKNYAYADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTKNAKLAIFRPKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQQGTLENLYWKSLGCDSCSGETSVCINNTVCAVPNLKCRNHGGPIDCNIGIQLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAV*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKCGSHMMRRRMIMVTVHMMIVVMMIKNYAYADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTKNAKLAIFRPKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQQGTLENLYWKSLGCDSCSGETSVCINNTVCAVPNLKCRNHGGPIDCNIGIQLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAVPGHPQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
255556223	237	conserved hypothetical protein [Ricinus	0.873	0.902	0.655	2e-79
225428651	240	PREDICTED: uncharacterized protein LOC10	0.844	0.862	0.653	2e-79
449455218	235	PREDICTED: uncharacterized protein LOC10	0.844	0.880	0.618	3e-78
147855062	249	hypothetical protein VITISV_027624 [Viti	0.844	0.831	0.621	6e-77
297836216	358	hypothetical protein ARALYDRAFT_319534 [	0.857	0.586	0.598	7e-74
449444821	262	PREDICTED: uncharacterized protein LOC10	0.906	0.847	0.563	7e-72
374256101	248	putative expp1 protein [Elaeis guineensi	0.861	0.850	0.590	2e-70
388516865	254	unknown [Lotus japonicus]	0.946	0.913	0.563	2e-70
15226643	367	CSL zinc finger domain-containing protei	0.857	0.572	0.572	3e-70
88683134	243	expp1 protein precursor [Solanum tuberos	0.934	0.942	0.545	5e-69

>gi|255556223|ref|XP_002519146.1| conserved hypothetical protein [Ricinus communis] gi|223541809|gb|EEF43357.1| conserved hypothetical protein [Ricinus communis]

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 141/215 (65%), Positives = 174/215 (80%), Gaps = 1/215 (0%)

Query: 26  MIKNYAYADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTKN 85
           MI     AD+N +F+PC D+K+++ DGFTFGLAFS+KE+FF D +QLSPCDSRLAL +K 
Sbjct: 17  MIMAANAADSNDVFSPCSDAKIEKSDGFTFGLAFSSKESFFFDHVQLSPCDSRLALFSKM 76

Query: 86  AKLAIFRPKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLT 145
           A+LA+FRPKVDEISLLTI+ + FNP +SGGY+VAFAGRKYAARS P +VAD+   VT+ T
Sbjct: 77  AQLAVFRPKVDEISLLTINSSTFNPGMSGGYMVAFAGRKYAARSFPVMVADNGIIVTSFT 136

Query: 146 LVLEFQQGTLENLYWKSLGCDSCSGETSVCINNTVCAVPNLKCRNHGGPIDCNIGIQLTF 205
           LVLEFQQG L+NLYWKS GCD CS +  VC+N   CAV N KCR++GG IDCN+G+QLTF
Sbjct: 137 LVLEFQQGILQNLYWKSFGCDKCSKDF-VCLNGKDCAVHNSKCRSNGGHIDCNLGVQLTF 195

Query: 206 SGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAV 240
           SGTD+  + LNSWYEV NLR+ SLY LYSN+  ++
Sbjct: 196 SGTDKNLETLNSWYEVSNLRQYSLYGLYSNLRHSI 230

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428651|ref|XP_002281560.1| PREDICTED: uncharacterized protein LOC100243476 [Vitis vinifera] gi|297741368|emb|CBI32499.3| unnamed protein product [Vitis vinifera]

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 136/208 (65%), Positives = 170/208 (81%), Gaps = 1/208 (0%)

Query: 34  DTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTKNAKLAIFRP 93
           DTN +F+PC D+KVKR+DGFTFGLAFSTK++FF +Q QLSPCD RL+L + N++LA+FRP
Sbjct: 25  DTNDVFDPCSDAKVKRFDGFTFGLAFSTKDSFFFNQTQLSPCDRRLSLSSTNSQLAVFRP 84

Query: 94  KVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQQG 153
           KVDEISLLT++ TNFNPI +GGY+VAFAGRKYAARS P LVAD  HT+T+ TLVLEF++G
Sbjct: 85  KVDEISLLTVNSTNFNPISNGGYMVAFAGRKYAARSTPVLVADGQHTITSFTLVLEFKKG 144

Query: 154 TLENLYWKSLGCDSCSGETS-VCINNTVCAVPNLKCRNHGGPIDCNIGIQLTFSGTDEKR 212
           TL++ YWK  GC  CS  ++ VC+N   CAV +  C+N GG IDCNI IQL FSGTD+K 
Sbjct: 145 TLQSFYWKKFGCSKCSKSSAFVCLNEQDCAVKSSHCKNQGGSIDCNISIQLIFSGTDKKL 204

Query: 213 QVLNSWYEVENLRKLSLYDLYSNVAEAV 240
             LNSWYE++NLR+ SLY LYSN+ +A+
Sbjct: 205 VALNSWYELKNLRQYSLYGLYSNIRDAI 232

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455218|ref|XP_004145350.1| PREDICTED: uncharacterized protein LOC101213680 [Cucumis sativus] gi|449471268|ref|XP_004153260.1| PREDICTED: uncharacterized protein LOC101222204 [Cucumis sativus] gi|449502395|ref|XP_004161628.1| PREDICTED: uncharacterized LOC101222204 [Cucumis sativus]

 Score =  297 bits (760), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 128/207 (61%), Positives = 174/207 (84%)

Query: 34  DTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTKNAKLAIFRP 93
           DTN +++PC DSK++R DGFTFG+AFS+KE+FF DQIQ SPCD+RL+L +K A+L +FRP
Sbjct: 24  DTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPCDTRLSLASKMAQLVVFRP 83

Query: 94  KVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQQG 153
           KVD++S LTI+ + FNP L+GGY+VAFAG+KYAARS P ++ D+++T+T+ TLVLEFQ+G
Sbjct: 84  KVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSLPVMITDNSNTITSFTLVLEFQRG 143

Query: 154 TLENLYWKSLGCDSCSGETSVCINNTVCAVPNLKCRNHGGPIDCNIGIQLTFSGTDEKRQ 213
            L+NL+WK  GCD CSG+ S+C++N  CA+PN KC+ +GG +DCN+GIQL FSGTD+  +
Sbjct: 144 ILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKYNGGSVDCNLGIQLAFSGTDKNLE 203

Query: 214 VLNSWYEVENLRKLSLYDLYSNVAEAV 240
           VLNSWYEV+NLR+ SLY L+S+V + V
Sbjct: 204 VLNSWYEVDNLRRFSLYQLFSDVRDTV 230

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147855062|emb|CAN82373.1| hypothetical protein VITISV_027624 [Vitis vinifera]

 Score =  293 bits (749), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 136/219 (62%), Positives = 170/219 (77%), Gaps = 12/219 (5%)

Query: 34  DTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTKNAKLAIFRP 93
           DTN +F+PC D+KVKR+DGFTFGLAFSTK++FF +Q QLSPCD RL+L + N++LA+FRP
Sbjct: 23  DTNXVFDPCSDAKVKRFDGFTFGLAFSTKDSFFFNQTQLSPCDRRLSLSSTNSQLAVFRP 82

Query: 94  KVDEISLLTIDDTNFNP-----------ILSGGYVVAFAGRKYAARSAPTLVADSTHTVT 142
           KVDEISLLT++ TNFNP           I +GGY+VAFAGRKYAARS P LVAD  HT+T
Sbjct: 83  KVDEISLLTVNSTNFNPVWFNDFLVFSQISNGGYMVAFAGRKYAARSTPVLVADGQHTIT 142

Query: 143 NLTLVLEFQQGTLENLYWKSLGCDSCSGETS-VCINNTVCAVPNLKCRNHGGPIDCNIGI 201
           + TLVLEF++GTL++ YWK  GC  CS  ++ VC+N   CAV +  C+N GG IDCNI I
Sbjct: 143 SFTLVLEFKKGTLQSFYWKKFGCSKCSKSSAFVCLNEQDCAVKSSHCKNQGGSIDCNISI 202

Query: 202 QLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAV 240
           QL FSGTD+K   LNSWYE++NLR+ SLY LYSN+ +A+
Sbjct: 203 QLIFSGTDKKLVALNSWYELKNLRQYSLYGLYSNIRDAI 241

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836216|ref|XP_002885990.1| hypothetical protein ARALYDRAFT_319534 [Arabidopsis lyrata subsp. lyrata] gi|297331830|gb|EFH62249.1| hypothetical protein ARALYDRAFT_319534 [Arabidopsis lyrata subsp. lyrata]

 Score =  282 bits (722), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 128/214 (59%), Positives = 167/214 (78%), Gaps = 4/214 (1%)

Query: 33  ADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTKNAKLAIFR 92
           +D N +++PC D+++ + DGFT G+A S+KEAFFLDQ+QLSPCDSRL L  K A+LA+FR
Sbjct: 142 SDNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQVQLSPCDSRLGLAAKMAQLALFR 201

Query: 93  PKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQQ 152
           PKVDEISLL+ID + FNP  +GG++V FAG KYAARS+P  VAD ++T+T  TLVLEFQ+
Sbjct: 202 PKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARSSPVKVADGSNTITAFTLVLEFQK 261

Query: 153 GTLENLYWKSLGCDSCSG----ETSVCINNTVCAVPNLKCRNHGGPIDCNIGIQLTFSGT 208
           G L+NL+WKS GCDSC G     +SVC+N T CAVP  KC+ +GG  +CNIGIQ+ FSGT
Sbjct: 262 GVLQNLFWKSFGCDSCKGIGSSSSSVCLNGTDCAVPTSKCKANGGEANCNIGIQVAFSGT 321

Query: 209 DEKRQVLNSWYEVENLRKLSLYDLYSNVAEAVPG 242
           D+  + LN+WYEV NLR+ SL DLY+N  +++ G
Sbjct: 322 DKNLESLNTWYEVNNLRQYSLTDLYANAVDSLSG 355

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444821|ref|XP_004140172.1| PREDICTED: uncharacterized protein LOC101221211 [Cucumis sativus] gi|449523305|ref|XP_004168664.1| PREDICTED: uncharacterized LOC101221211 [Cucumis sativus]

 Score =  276 bits (705), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 128/227 (56%), Positives = 178/227 (78%), Gaps = 5/227 (2%)

Query: 21  MIVVMMIKNYAYADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQI-QLSPCDSRL 79
           M +++++ + A A+TN ++ PC D+K++R DGFTFG+AFS++++FF +Q  QLSPCD RL
Sbjct: 32  MALIVVVHSEA-ANTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFANQSHQLSPCDRRL 90

Query: 80  ALPTKNAKLAIFRPKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTH 139
           +L + N++LA+FRP+VD+ISLL+I+ ++F P   GGY+VAFAGRKYAARS P  VA+ST 
Sbjct: 91  SLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAGRKYAARSQPAFVANSTF 150

Query: 140 TVTNLTLVLEFQQGTLENLYWKSLGCDSCSGETS---VCINNTVCAVPNLKCRNHGGPID 196
            VT+ TLVLEFQ+G L+NLYWK  GC SCSG++    VC+NN  CA+    CRN GG +D
Sbjct: 151 IVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCAIRTSSCRNRGGNVD 210

Query: 197 CNIGIQLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAVPGH 243
           C++GIQLTFSGTD+    LNSWYEV+NLR+ SLY++YSN+ +++ G 
Sbjct: 211 CSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRDSLTGQ 257

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|374256101|gb|AEZ00912.1| putative expp1 protein [Elaeis guineensis]

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 127/215 (59%), Positives = 166/215 (77%), Gaps = 4/215 (1%)

Query: 33  ADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTK-NAKLAIF 91
            D N +F PC D+K++R DGFTFG+AFST+++FF +Q QLSPCDSRLAL +  NA+LA+F
Sbjct: 29  GDNNRVFQPCADTKIQRGDGFTFGIAFSTRDSFFFNQTQLSPCDSRLALASNANAQLALF 88

Query: 92  RPKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQ 151
           RPKVDEISLLT++ T +  + +GG++VAFAGRKYAARS P  V +S++ VT+ TLVLEFQ
Sbjct: 89  RPKVDEISLLTVNTTVYPAVTNGGFMVAFAGRKYAARSLPAFVGNSSYIVTSFTLVLEFQ 148

Query: 152 QGTLENLYWKSLGCDSCSGETS-VCINNTVCAVPNLKCR--NHGGPIDCNIGIQLTFSGT 208
           +G L+NLYWK  GC SCSG+++ VC+N   CA+    C+  N GG +DC+IGIQL FSGT
Sbjct: 149 KGRLQNLYWKRDGCASCSGKSNFVCLNKLECAIKTSSCKNANQGGSVDCSIGIQLAFSGT 208

Query: 209 DEKRQVLNSWYEVENLRKLSLYDLYSNVAEAVPGH 243
           DE   VLNSWYEV NL++ SLY LYSN+ +++   
Sbjct: 209 DEHDAVLNSWYEVSNLQQYSLYGLYSNLKDSLTSQ 243

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516865|gb|AFK46494.1| unknown [Lotus japonicus]

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 133/236 (56%), Positives = 177/236 (75%), Gaps = 4/236 (1%)

Query: 9   MRRRMIMVTVHMMIVVMMIKNYAYADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLD 68
           MRR   M  V ++ V++M+     ADTN +++PC D+KV+R DGFTFG+A + K+ FF D
Sbjct: 20  MRRTTFMKQVLVIGVMVMLFVADAADTNDVYSPCLDAKVQRGDGFTFGIALADKQIFFQD 79

Query: 69  Q--IQLSPCDSRLALPTKNAKLAIFRPKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYA 126
               QLSPCDSRL L +K A+ A+FRPKVDEISLLTI+ +  +   +GGY+VAFAG+KYA
Sbjct: 80  GNGPQLSPCDSRLGLSSKEAQAAMFRPKVDEISLLTINRSALDSGKTGGYMVAFAGQKYA 139

Query: 127 ARSAPTLVADSTHTVTNLTLVLEFQQGTLENLYWKSLGCDSCSGETSVCINNTVCAVPNL 186
           ARS P + AD++HT+T+ TLVLEF++GTL+NL+WK  GC +CS + SVC+NN  CAVPN 
Sbjct: 140 ARSLPIMFADNSHTITSFTLVLEFKEGTLQNLFWKRFGCGACS-KGSVCLNNQDCAVPNT 198

Query: 187 KCRNHGGPIDCNIGIQLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAVPG 242
            C+ +GG   CNIGIQLTFSGTD+    LNSWYEV+NLR+ SLY L+S+  +++ G
Sbjct: 199 DCQKNGGTT-CNIGIQLTFSGTDKNLDALNSWYEVKNLRQYSLYGLFSDHRQSIIG 253

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226643|ref|NP_179191.1| CSL zinc finger domain-containing protein [Arabidopsis thaliana] gi|5306242|gb|AAD41975.1| unknown protein [Arabidopsis thaliana] gi|330251353|gb|AEC06447.1| CSL zinc finger domain-containing protein [Arabidopsis thaliana]

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 127/222 (57%), Positives = 164/222 (73%), Gaps = 12/222 (5%)

Query: 33  ADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTKNAKLAIFR 92
           AD N +++PC D+++ + DGFT G+A S+KEAFFLDQ+QLSPCD+RL L  K A+LA+FR
Sbjct: 143 ADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQVQLSPCDTRLGLAAKMAQLALFR 202

Query: 93  PKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLT------- 145
           PKVDEISLL+ID + FNP  +GG++V FAG KYAARS P  VAD ++T+T  T       
Sbjct: 203 PKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARSYPVKVADGSNTITAFTLVMKLTL 262

Query: 146 --LVLEFQQGTLENLYWKSLGCDSCSG---ETSVCINNTVCAVPNLKCRNHGGPIDCNIG 200
             LVLEFQ+G L+NL+WKS GCD C G    +SVC+N T CAVP  KC+ +GG  +CNIG
Sbjct: 263 SPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTDCAVPTSKCKANGGQANCNIG 322

Query: 201 IQLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAVPG 242
           IQ+ FSGTD   + LN+WYEV NLR+ SL DLY+N  +++ G
Sbjct: 323 IQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDSLSG 364

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|88683134|emb|CAJ77501.1| expp1 protein precursor [Solanum tuberosum]

 Score =  266 bits (681), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 126/231 (54%), Positives = 177/231 (76%), Gaps = 2/231 (0%)

Query: 8   MMRRRMIMVTVHMMIVVMMIKNYAYADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFL 67
           M  +R+ ++ V ++I  + +   + +DTN +++PC D+KV+R DGF+FG+AF+++ +FF+
Sbjct: 1   MAIQRLPLLLVFLLISSLTLLAQSRSDTNHVYSPCADAKVQRSDGFSFGIAFASRTSFFV 60

Query: 68  DQ-IQLSPCDSRLALPTKNAKLAIFRPKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYA 126
           +  +QLSPCD RL+L + N+++A+FRPKVDEISLLTI+ ++F P   GGY+VAFAGRKYA
Sbjct: 61  NSSVQLSPCDKRLSLSSANSQIAVFRPKVDEISLLTINTSSFFPDSYGGYMVAFAGRKYA 120

Query: 127 ARSAPTLVADSTHTVTNLTLVLEFQQGTLENLYWKSLGCDSCSGETS-VCINNTVCAVPN 185
           ARS P  VA+ T TVT+ TLV EF++G LENLYWK  GC SCSG ++ VC+N   CA+  
Sbjct: 121 ARSLPAFVANGTFTVTSFTLVHEFKKGRLENLYWKRDGCSSCSGNSNFVCLNGQDCAIRT 180

Query: 186 LKCRNHGGPIDCNIGIQLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNV 236
             C+N GG +DC++GIQLTFSGTD+   V NSW+EV+NLR+ SLY LYSN+
Sbjct: 181 NNCKNRGGNVDCSLGIQLTFSGTDKHASVFNSWFEVKNLRQYSLYGLYSNL 231

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
TAIR|locus:2044606	367	AT2G15910 "AT2G15910" [Arabido	0.857	0.572	0.572	2.8e-66
TAIR|locus:2081413	246	AT3G44150 "AT3G44150" [Arabido	0.844	0.841	0.559	4.2e-63
TAIR|locus:2081571	246	AT3G11800 "AT3G11800" [Arabido	0.844	0.841	0.539	1.3e-59
TAIR|locus:2114500	128	AT3G48630 "AT3G48630" [Arabido	0.224	0.429	0.428	3.7e-06

TAIR|locus:2044606 AT2G15910 "AT2G15910" [Arabidopsis thaliana (taxid:3702)]

 Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
 Identities = 127/222 (57%), Positives = 164/222 (73%)

Query:    33 ADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTKNAKLAIFR 92
             AD N +++PC D+++ + DGFT G+A S+KEAFFLDQ+QLSPCD+RL L  K A+LA+FR
Sbjct:   143 ADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQVQLSPCDTRLGLAAKMAQLALFR 202

Query:    93 PKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLV----- 147
             PKVDEISLL+ID + FNP  +GG++V FAG KYAARS P  VAD ++T+T  TLV     
Sbjct:   203 PKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARSYPVKVADGSNTITAFTLVMKLTL 262

Query:   148 ----LEFQQGTLENLYWKSLGCDSCSG---ETSVCINNTVCAVPNLKCRNHGGPIDCNIG 200
                 LEFQ+G L+NL+WKS GCD C G    +SVC+N T CAVP  KC+ +GG  +CNIG
Sbjct:   263 SPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTDCAVPTSKCKANGGQANCNIG 322

Query:   201 IQLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAVPG 242
             IQ+ FSGTD   + LN+WYEV NLR+ SL DLY+N  +++ G
Sbjct:   323 IQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDSLSG 364

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2081413 AT3G44150 "AT3G44150" [Arabidopsis thaliana (taxid:3702)]

 Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
 Identities = 117/209 (55%), Positives = 160/209 (76%)

Query:    34 DTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQ-IQLSPCDSRLALPTKNAKLAIFR 92
             +TN I++PC D++++R DGFTFG+AFS++ +FF++Q + LSPCD RL+L   N++ ++FR
Sbjct:    30 NTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQTVLLSPCDRRLSLAAMNSQFSVFR 89

Query:    93 PKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQQ 152
             PK+DEISLL+I+ + F P   GGY+VAFAGRKYAARS P  +A+ST  VT+ TLV+EFQ+
Sbjct:    90 PKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAARSIPAFIANSTFIVTSFTLVMEFQK 149

Query:   153 GTLENLYWKSLGCDSCSGETS-VCINNTVCAVPNLKCRNHGGPIDCNIGIQLTFSGTDEK 211
             G L+NLYWK  GC SC G  + VC+N   CA+    C+  GG +DC++GIQL FSGTD+ 
Sbjct:   150 GRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPSCKGRGGAVDCSLGIQLAFSGTDKH 209

Query:   212 RQVLNSWYEVENLRKLSLYDLYSNVAEAV 240
               VLNSWYEVENL++ SLY LYSN+  ++
Sbjct:   210 LAVLNSWYEVENLKQYSLYGLYSNLKSSL 238

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2081571 AT3G11800 "AT3G11800" [Arabidopsis thaliana (taxid:3702)]

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 116/215 (53%), Positives = 153/215 (71%)

Query:    34 DTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQ----IQLSPCDSRLALPTKNAKLA 89
             D N +++PC DS V   DGFTFG+AF+ K++FF       +Q SPCD R      N+++A
Sbjct:    24 DNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHRHLSLNGNSEVA 83

Query:    90 IFRPKVDEISLLTID---DTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTL 146
             +FRPKVDEI+LLTI+    ++F P  S GY+VAFAG KYAARS P +VADS H VT+ TL
Sbjct:    84 VFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMVADSNHIVTSFTL 143

Query:   147 VLEFQQGTLENLYWKSLGCDSCSGETS-VCINNTVCAVPNLKCRNHGGPIDCNIGIQLTF 205
             VLEFQ+G LEN++WK  GC  CSG++  VC+N   CA+    C+N GG +DC++GIQL F
Sbjct:   144 VLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQVDCSLGIQLAF 203

Query:   206 SGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAV 240
             SGTD+    LNSWYEV NL++ SLY LYSN+ +++
Sbjct:   204 SGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSL 238

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2114500 AT3G48630 "AT3G48630" [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 3.7e-06, P = 3.7e-06
 Identities = 24/56 (42%), Positives = 33/56 (58%)

Query:   116 YVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQQGTLENLYWKSLGCDSCSGE 171
             Y V   G +  +   P  +A+ST  VT+ T V+EFQ+G L+NLYWK   C   +GE
Sbjct:     2 YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCAK-AGE 56


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      245       225   0.00077  113 3  11 22  0.39    33
                                                     32  0.41    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  197 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.23u 0.12s 18.35t   Elapsed:  00:00:01
  Total cpu time:  18.23u 0.12s 18.35t   Elapsed:  00:00:01
  Start:  Sat May 11 12:38:02 2013   End:  Sat May 11 12:38:03 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00036493001 SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (225 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	245
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 3e-05
 Identities = 37/267 (13%), Positives = 63/267 (23%), Gaps = 87/267 (32%)

Query: 11  RRMIMVTVHMM------IVVMMIKNYAYADTNIIFNPCDDSKVKR-------WDGFTFGL 57
           R    V +  +       V          D       C   KV+        W       
Sbjct: 148 RPAKNVLIDGVLGSGKTWVA--------LDV------CLSYKVQCKMDFKIFW--LNLKN 191

Query: 58  AFSTKE--------AFFLDQIQLSPCDSRLALP-----TKNAKLAIFRPKVDEISLLTID 104
             S +          + +D    S  D    +       +     + + K  E  LL + 
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL 251

Query: 105 DTNFNPILSGGYVVAFAGRKYAARSAPTL-------VADSTHTVTNLTLVLEFQQGTLEN 157
           +       +     AF            L       V D     T   + L+    TL  
Sbjct: 252 NVQNAKAWN-----AFNLS------CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTP 300

Query: 158 LYWKSLGCDSCSGETSVCINNTVCAVPNLKCRNHGGPIDCN-IGIQLTFSGTDEKRQVLN 216
              KSL            ++     +P      +  P   + I   +        R  L 
Sbjct: 301 DEVKSL--------LLKYLDCRPQDLPREVLTTN--PRRLSIIAESI--------RDGLA 342

Query: 217 SW--------YEVENLRKLSLYDLYSN 235
           +W         ++  + + SL  L   
Sbjct: 343 TWDNWKHVNCDKLTTIIESSLNVLEPA 369

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00