Citrus Sinensis ID: 040837


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270------
MLVQCCTSLNSCALSSQRAFLSHNHNLDRFRNHPSRRTCKFTCLLHVGFEDIAQVVHNKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALERGFSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALNRHLAKAQVNSTVSKDRDNLIDGQEGAPSTSNMECLGSLLANETKSYASNSTNASPLLLRSSKKTRQTEEMVLPFGLADDVQEGSEKKVDNSIMFKESIGHTEVEVVAGALLGFLVSLAVSAIM
cccccccccccccccccccEEcccccccccccccccccccHHHcccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHccccccHHcccccccccccccccccccccccccccccccccHHHHcHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHc
ccEEEccccccccccccccccccccccccccccccccccHHHHHHcccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccHEEEccHHHHHHHHcccccccccccccccccccccccccccccHcccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHc
MLVQCctslnscalssqraflshnhnldrfrnhpsrrtckftcllhvgfeDIAQVVHNKVLIAAGVSAaigqlskpvtgsllygkdfdlkaafqaggfpsthsSCVVAAATGLalergfsdsfFGLTVVYAGLVMYDAQGVRREVGVHAKALNRHLAKAQvnstvskdrdnlidgqegapstsnmeCLGSLLANetksyasnstnasplllrsskktrqteemvlpfgladdvqegsekkvdnsimfkesightEVEVVAGALLGFLVSLAVSAIM
MLVQCCTSLNSCALSSQRAFLSHNHNldrfrnhpsrRTCKFTCLLHVGFEDIAQVVHNKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALERGFSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALNRhlakaqvnstvskdrdnlidgqegapstsnMECLGSLLANETKSyasnstnasplllrsskktrqTEEMVLpfgladdvqegsEKKVDNSIMFKESIGHTEVEVVAGALLGFLVSLAVSAIM
MLVQCCTSLNSCALSSQRAFLSHNHNLDRFRNHPSRRTCKFTCLLHVGFEDIAQVVHNKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALERGFSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALNRHLAKAQVNSTVSKDRDNLIDGQEGAPSTSNMECLGSLLANETKSYASNSTNASPLLLRSSKKTRQTEEMVLPFGLADDVQEGSEKKVDNSIMFKESIGHTEVEVVAGALLGFLVSLAVSAIM
**VQCCTSLNSCALSSQRAFLSHNHNLDRFRNHPSRRTCKFTCLLHVGFEDIAQVVHNKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALERGFSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALNRHLA**************************************************************************************SIMFKESIGHTEVEVVAGALLGFLVSLAVS***
*********NS**LSSQRAFL*******************FTCLLHVGFEDIAQVVHNKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALERGFSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALNRHLAKAQ*************************ECLGSLLANETKS***********************************QEGSEKKVDNSIMFKESIGHTEVEVVAGALLGFLVSLAVSAIM
MLVQCCTSLNSCALSSQRAFLSHNHNLDRFRNHPSRRTCKFTCLLHVGFEDIAQVVHNKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALERGFSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALNRHLAKAQVNSTVSKDRDNLIDGQEGAPSTSNMECLGSLLANETKSYASNSTNASPLLLRSSKKTRQTEEMVLPFGLADDVQEGSEKKVDNSIMFKESIGHTEVEVVAGALLGFLVSLAVSAIM
*LV*CCTSLNSCALSSQRAFLSHNHNLDRFRNHPSRRTCKFTCLLHVGFEDIAQVVHNKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALERGFSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALNRHLAKAQVNSTVSKDRDNLIDGQEGAPSTSNMECLGSLLANE********************************GLADDVQEGSEKKVDNSIMFKESIGHTEVEVVAGALLGFLVSLAVSAIM
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHi
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MLVQCCTSLNSCALSSQRAFLSHNHNLDRFRNHPSRRTCKFTCLLHVGFEDIAQVVHNKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALERGFSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALNRHLAKAQVNSTVSKDRDNLIDGQEGAPSTSNMECLGSLLANETKSYASNSTNASPLLLRSSKKTRQTEEMVLPFGLADDVQEGSEKKVDNSIMFKESIGHTEVEVVAGALLGFLVSLAVSAIM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query276 2.2.26 [Sep-21-2011]
O32107158 Uncharacterized membrane yes no 0.268 0.468 0.378 2e-09
>sp|O32107|YUID_BACSU Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1 Back     alignment and function desciption
 Score = 63.5 bits (153), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 42/74 (56%)

Query: 81  LLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALERGFSDSFFGLTVVYAGLVMYDAQG 140
            +  +  D       GG PS+HS+ V A +TG+ALE G   S F ++ ++A + M+DA G
Sbjct: 28  FIVSRKLDWSLVTSTGGMPSSHSAAVTALSTGVALEHGLDSSLFAVSAIFAVITMFDATG 87

Query: 141 VRREVGVHAKALNR 154
           VRR  G  A  +N+
Sbjct: 88  VRRHAGEQATVINK 101





Bacillus subtilis (strain 168) (taxid: 224308)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query276
118486162268 unknown [Populus trichocarpa] 0.963 0.992 0.600 4e-73
356528613267 PREDICTED: uncharacterized protein LOC10 0.855 0.883 0.556 3e-64
297736085253 unnamed protein product [Vitis vinifera] 0.786 0.857 0.574 1e-61
359494600264 PREDICTED: uncharacterized protein LOC10 0.786 0.821 0.574 3e-61
357451199279 Membrane protein, putative [Medicago tru 0.880 0.870 0.504 1e-56
297834074213 hypothetical protein ARALYDRAFT_478628 [ 0.771 1.0 0.460 4e-54
147857568349 hypothetical protein VITISV_001327 [Viti 0.695 0.550 0.585 9e-53
18399713213 Acid phosphatase/vanadium-dependent halo 0.731 0.948 0.458 1e-52
449444314271 PREDICTED: uncharacterized protein LOC10 0.927 0.944 0.453 2e-50
224109130214 predicted protein [Populus trichocarpa] 0.634 0.817 0.644 3e-50
>gi|118486162|gb|ABK94924.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 167/278 (60%), Positives = 194/278 (69%), Gaps = 12/278 (4%)

Query: 1   MLVQCCTSLNSCALSSQRAFLSHN--HNLDRFRNHPSRRTCKFTCLLHVGFEDIAQVVHN 58
           M +QC +S ++    +     S +  +N  RFR H  R+  K TC L +G EDIA++ HN
Sbjct: 1   MALQCWSSASNLTYPNLSTLFSDSKPYNFPRFRKH--RKPAKLTCFLKLGVEDIAEIAHN 58

Query: 59  KVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALERG 118
           KV+IAA VSAAIGQLSKP T  LLYGKDFD K  FQAGGFPSTHSS VVAAAT LALERG
Sbjct: 59  KVVIAAVVSAAIGQLSKPYTCVLLYGKDFDFKTTFQAGGFPSTHSSSVVAAATCLALERG 118

Query: 119 FSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALNRHLAKAQVNSTVSKDRDNLIDGQEG 178
           FSDS FGL VVYA LVMYDAQGVRREVG HAKALN+ L K +VNS V   RD+LID QE 
Sbjct: 119 FSDSIFGLAVVYAFLVMYDAQGVRREVGNHAKALNKMLPKTEVNSKVC-SRDDLIDSQE- 176

Query: 179 APSTSNMECLGSLLANETKSYASNSTNASPLLLRSSKKTRQTEEMVLPFGLADDVQEGSE 238
           AP     E LG+LL+ E + +  NSTN SPLLL +  KTRQT +  L F      +E +E
Sbjct: 177 APE----ENLGALLSKEERPFLPNSTN-SPLLLETENKTRQTSQR-LAFSSLTAAEEATE 230

Query: 239 KKVDNSIMFKESIGHTEVEVVAGALLGFLVSLAVSAIM 276
           K   +S   KESIGHTEVEV+AGALLGF VS+AV  I+
Sbjct: 231 KIPCSSAPLKESIGHTEVEVIAGALLGFFVSVAVYTIL 268




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528613|ref|XP_003532894.1| PREDICTED: uncharacterized protein LOC100784835 [Glycine max] Back     alignment and taxonomy information
>gi|297736085|emb|CBI24123.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359494600|ref|XP_002265839.2| PREDICTED: uncharacterized protein LOC100263890 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357451199|ref|XP_003595876.1| Membrane protein, putative [Medicago truncatula] gi|355484924|gb|AES66127.1| Membrane protein, putative [Medicago truncatula] Back     alignment and taxonomy information
>gi|297834074|ref|XP_002884919.1| hypothetical protein ARALYDRAFT_478628 [Arabidopsis lyrata subsp. lyrata] gi|297330759|gb|EFH61178.1| hypothetical protein ARALYDRAFT_478628 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|147857568|emb|CAN83080.1| hypothetical protein VITISV_001327 [Vitis vinifera] Back     alignment and taxonomy information
>gi|18399713|ref|NP_566432.1| Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana] gi|15810239|gb|AAL07237.1| unknown protein [Arabidopsis thaliana] gi|20465355|gb|AAM20081.1| unknown protein [Arabidopsis thaliana] gi|332641711|gb|AEE75232.1| Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449444314|ref|XP_004139920.1| PREDICTED: uncharacterized protein LOC101219161 [Cucumis sativus] gi|449475834|ref|XP_004154565.1| PREDICTED: uncharacterized protein LOC101226416 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224109130|ref|XP_002315094.1| predicted protein [Populus trichocarpa] gi|222864134|gb|EEF01265.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query276
TAIR|locus:505006336213 AT3G12685 "AT3G12685" [Arabido 0.543 0.704 0.607 8.8e-55
UNIPROTKB|Q81YD7141 BAS3352 "Uncharacterized prote 0.355 0.695 0.404 5.8e-20
TIGR_CMR|BA_3613141 BA_3613 "conserved hypothetica 0.355 0.695 0.404 5.8e-20
UNIPROTKB|Q71X40157 LMOf2365_2359 "Putative unchar 0.347 0.611 0.412 2.7e-18
TAIR|locus:2008575163 AT1G67600 "AT1G67600" [Arabido 0.347 0.588 0.402 6.1e-16
TAIR|locus:2089950174 AT3G21610 "AT3G21610" [Arabido 0.351 0.557 0.377 1.6e-15
TAIR|locus:2076790284 AT3G61770 "AT3G61770" [Arabido 0.365 0.355 0.362 2.8e-13
TAIR|locus:505006336 AT3G12685 "AT3G12685" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 466 (169.1 bits), Expect = 8.8e-55, Sum P(2) = 8.8e-55
 Identities = 96/158 (60%), Positives = 118/158 (74%)

Query:    17 QRAFLSHNHN--LDRFRNHP-SRRTC-----KFTCLLHVGFEDIAQVVHNKVLIAAGVSA 68
             +  F+SHN N     F N   +  +C     + TC+++VGF+DIA+V+HNKVLIAAG SA
Sbjct:     4 KHCFVSHNANDLCFSFSNSKFNLASCPKKPPRLTCVVNVGFQDIAEVIHNKVLIAAGTSA 63

Query:    69 AIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALERGFSDSFFGLTV 128
              IGQLSKP T  +LYGK+ D ++ FQAGGFPSTHSS VVAAAT +A ERGF+DS FGLTV
Sbjct:    64 VIGQLSKPFTSVVLYGKNLDFRSVFQAGGFPSTHSSSVVAAATAIAFERGFADSIFGLTV 123

Query:   129 VYAGLVMYDAQGVRREVGVHAKALNRHLAKAQVNSTVS 166
             VYAGL+MYDAQGVRREVG HAK LN+  A A+ +  +S
Sbjct:   124 VYAGLIMYDAQGVRREVGKHAKVLNKLTANARRSEVMS 161


GO:0003674 "molecular_function" evidence=ND
GO:0005886 "plasma membrane" evidence=ISM
GO:0008150 "biological_process" evidence=ND
UNIPROTKB|Q81YD7 BAS3352 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)] Back     alignment and assigned GO terms
TIGR_CMR|BA_3613 BA_3613 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|Q71X40 LMOf2365_2359 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)] Back     alignment and assigned GO terms
TAIR|locus:2008575 AT1G67600 "AT1G67600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089950 AT3G21610 "AT3G21610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076790 AT3G61770 "AT3G61770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query276
pfam02681141 pfam02681, DUF212, Divergent PAP2 family 6e-29
COG1963153 COG1963, COG1963, Uncharacterized protein conserve 4e-23
pfam02681141 pfam02681, DUF212, Divergent PAP2 family 0.001
>gnl|CDD|145700 pfam02681, DUF212, Divergent PAP2 family Back     alignment and domain information
 Score =  106 bits (268), Expect = 6e-29
 Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 1/100 (1%)

Query: 55  VVHNKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLA 114
           ++ NKVL+AA ++  + Q  K +       + +D +  F+ GG PS+HS+ V A ATG+ 
Sbjct: 1   LLSNKVLLAALLAWFLAQFIKVIIELFKERR-WDFRVLFETGGMPSSHSALVTALATGVG 59

Query: 115 LERGFSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALNR 154
           L+ GF  S F +  V+A +VMYDA GVRR  G  A+ LN+
Sbjct: 60  LQEGFDSSLFAIAAVFALIVMYDAAGVRRAAGKQAEVLNQ 99


This family is related to the pfam01569 family (personal obs: C Yeats). Length = 141

>gnl|CDD|224874 COG1963, COG1963, Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>gnl|CDD|145700 pfam02681, DUF212, Divergent PAP2 family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 276
PF02681141 DUF212: Divergent PAP2 family; InterPro: IPR003832 100.0
COG1963153 Uncharacterized protein conserved in bacteria [Fun 100.0
cd03383109 PAP2_diacylglycerolkinase PAP2_like proteins, diac 98.45
cd03394106 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super- 98.2
cd03388151 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-pho 97.71
PRK09597190 lipid A 1-phosphatase; Reviewed 97.66
cd03392182 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super- 97.62
cd03382159 PAP2_dolichyldiphosphatase PAP2_like proteins, dol 97.59
cd03391159 PAP2_containing_2_like PAP2, subfamily similar to 97.5
cd03393125 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super- 97.4
KOG3146228 consensus Dolichyl pyrophosphate phosphatase and r 97.37
cd01610122 PAP2_like PAP2_like proteins, a super-family of hi 97.36
cd03389186 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lip 97.33
cd03395177 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super- 97.04
cd03390193 PAP2_containing_1_like PAP2, subfamily similar to 97.03
PF01569129 PAP2: PAP2 superfamily This family includes the fo 96.99
cd03385144 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfa 96.97
PLN02525352 phosphatidic acid phosphatase family protein 96.91
cd03381235 PAP2_glucose_6_phosphatase PAP2_like proteins, glu 96.68
cd03384150 PAP2_wunen PAP2, wunen subfamily. Most likely a fa 96.5
COG0671232 PgpB Membrane-associated phospholipid phosphatase 96.46
smart00014116 acidPPc Acid phosphatase homologues. 96.45
PRK10699244 phosphatidylglycerophosphatase B; Provisional 96.3
PLN02731333 Putative lipid phosphate phosphatase 95.88
cd03396197 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super- 95.63
PLN02250314 lipid phosphate phosphatase 95.16
PLN02715327 lipid phosphate phosphatase 93.5
cd03380209 PAP2_like_1 PAP2_like_1 proteins, a sub-family of 92.11
PRK11837202 undecaprenyl pyrophosphate phosphatase; Provisiona 91.88
cd03397232 PAP2_acid_phosphatase PAP2, bacterial acid phospha 88.15
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised Back     alignment and domain information
Probab=100.00  E-value=5.1e-62  Score=412.61  Aligned_cols=141  Identities=41%  Similarity=0.627  Sum_probs=127.8

Q ss_pred             HhcCHHHHHHHHHHHHHHHHHHHHHhhhhcCccchhhhhccCCCCchhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHh
Q 040837           55 VVHNKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALERGFSDSFFGLTVVYAGLV  134 (276)
Q Consensus        55 l~~N~~L~~Al~a~~iAQ~iK~~i~~~~~~r~~d~~~l~~sGGMPSSHSA~V~aLataIGl~~G~~S~~FAiA~vfA~IV  134 (276)
                      |++|++|++|++||++||++|++++ ++++|+|||+++|+||||||||||+|+||||+||+++||+||+||+|++||+||
T Consensus         1 l~~N~~l~~a~~a~~~AQ~iK~~~~-~~~~r~~d~~~~~~sGGMPSSHSA~V~aLat~ig~~~G~~S~~FAia~v~a~IV   79 (141)
T PF02681_consen    1 LLSNKVLIAALIAWFIAQFIKVFIN-YLKERKWDWRRFFSSGGMPSSHSATVSALATAIGLQEGFDSPLFAIAAVFALIV   79 (141)
T ss_pred             CcCChHHHHHHHHHHHHHHHHHHHH-HHHhCcccHHHHhhcCCCCchHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHhh
Confidence            5799999999999999999999997 678899999999999999999999999999999999999999999999999999


Q ss_pred             hccccchhhhhhhhHHHHHHHHHhhhhccccccCCCccccCCCCCCCCCchhhhccccccccccccCCCCCCCchhhhcc
Q 040837          135 MYDAQGVRREVGVHAKALNRHLAKAQVNSTVSKDRDNLIDGQEGAPSTSNMECLGSLLANETKSYASNSTNASPLLLRSS  214 (276)
Q Consensus       135 MYDA~GVRr~aG~qA~vLN~Li~~~~~~~~~~~~~~~l~~s~~~~~~~~~~e~~~~~~~~e~~~~~~~~~~~~~~~~~s~  214 (276)
                      ||||+||||++|+||++||+|+++++..+.                                                  
T Consensus        80 myDA~GVRr~aG~qA~~lN~l~~~~~~~~~--------------------------------------------------  109 (141)
T PF02681_consen   80 MYDAMGVRRAAGKQAKVLNQLIEELEEEHQ--------------------------------------------------  109 (141)
T ss_pred             eeehHHHHHHHHHHHHHHHHHHHHHHhhhc--------------------------------------------------
Confidence            999999999999999999999999864310                                                  


Q ss_pred             ccccccccccccCCCcchhhccccccccccccccccCCCChhHHHHHHHHHHHHH
Q 040837          215 KKTRQTEEMVLPFGLADDVQEGSEKKVDNSIMFKESIGHTEVEVVAGALLGFLVS  269 (276)
Q Consensus       215 ~~~r~~~~~~~~~g~~~~~~e~~e~~~~~~~~LKE~lGHTpvEVlaGalLGiiVa  269 (276)
                                       .  +    ..+..+||||.+||||+||++|++||++||
T Consensus       110 -----------------~--~----~~~~~~~LKE~lGHtp~EV~~G~llGi~vA  141 (141)
T PF02681_consen  110 -----------------S--E----PPIQEKKLKELLGHTPLEVFAGALLGIVVA  141 (141)
T ss_pred             -----------------c--c----cchhhhcccccCCCCHHHHHHHHHHHHhhC
Confidence                             0  0    001237899999999999999999999985



>COG1963 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family Back     alignment and domain information
>cd03394 PAP2_like_5 PAP2_like_5 proteins Back     alignment and domain information
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily Back     alignment and domain information
>PRK09597 lipid A 1-phosphatase; Reviewed Back     alignment and domain information
>cd03392 PAP2_like_2 PAP2_like_2 proteins Back     alignment and domain information
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily Back     alignment and domain information
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2 Back     alignment and domain information
>cd03393 PAP2_like_3 PAP2_like_3 proteins Back     alignment and domain information
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism] Back     alignment and domain information
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies Back     alignment and domain information
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily Back     alignment and domain information
>cd03395 PAP2_like_4 PAP2_like_4 proteins Back     alignment and domain information
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1 Back     alignment and domain information
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3 Back     alignment and domain information
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily Back     alignment and domain information
>PLN02525 phosphatidic acid phosphatase family protein Back     alignment and domain information
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily Back     alignment and domain information
>cd03384 PAP2_wunen PAP2, wunen subfamily Back     alignment and domain information
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism] Back     alignment and domain information
>smart00014 acidPPc Acid phosphatase homologues Back     alignment and domain information
>PRK10699 phosphatidylglycerophosphatase B; Provisional Back     alignment and domain information
>PLN02731 Putative lipid phosphate phosphatase Back     alignment and domain information
>cd03396 PAP2_like_6 PAP2_like_6 proteins Back     alignment and domain information
>PLN02250 lipid phosphate phosphatase Back     alignment and domain information
>PLN02715 lipid phosphate phosphatase Back     alignment and domain information
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases Back     alignment and domain information
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional Back     alignment and domain information
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query276
2ipb_A230 PHON protein, class A nonspecific acid phosphatase 96.22
1d2t_A231 Acid phosphatase; all alpha, hydrolase; 1.90A {Esc 94.94
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A Back     alignment and structure
Probab=96.22  E-value=0.027  Score=48.83  Aligned_cols=22  Identities=23%  Similarity=0.285  Sum_probs=19.5

Q ss_pred             CCChhHHHHHHHHHHHHHHHHH
Q 040837          252 GHTEVEVVAGALLGFLVSLAVS  273 (276)
Q Consensus       252 GHTpvEVlaGalLGiiVal~~~  273 (276)
                      -|.|..|++|.++|++++..++
T Consensus       176 ~H~~sDVlaG~~lG~~~~~~~~  197 (230)
T 2ipb_A          176 AHWQSDVDAGRYVGAVEFARLQ  197 (230)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHT
T ss_pred             cccHHHHHHHHHHHHHHHHHHH
Confidence            5999999999999999987764



>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query276
d1d2ta_224 Bacterial acid phosphatase {Escherichia blattae [T 90.98
>d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia blattae [TaxId: 563]} Back     information, alignment and structure
class: All alpha proteins
fold: Acid phosphatase/Vanadium-dependent haloperoxidase
superfamily: Acid phosphatase/Vanadium-dependent haloperoxidase
family: Type 2 phosphatidic acid phosphatase, PAP2
domain: Bacterial acid phosphatase
species: Escherichia blattae [TaxId: 563]
Probab=90.98  E-value=0.3  Score=40.90  Aligned_cols=20  Identities=25%  Similarity=0.310  Sum_probs=16.8

Q ss_pred             CChhHHHHHHHHHHHHHHHH
Q 040837          253 HTEVEVVAGALLGFLVSLAV  272 (276)
Q Consensus       253 HTpvEVlaGalLGiiVal~~  272 (276)
                      |-|..|++|.++|..|...+
T Consensus       183 H~~sDv~aG~~lG~ai~a~l  202 (224)
T d1d2ta_         183 HWQSDVDAARVVGSAVVATL  202 (224)
T ss_dssp             SCHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHH
Confidence            99999999999998775443