Citrus Sinensis ID: 041340


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230------
MVVAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVIWLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKEGNTIHYLLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVTHYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLPQTKAAEKSK
cccccccccccccHHHHHHHHcHHHHHHHHHcccccccccccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHEEEEEEEEccccccccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccccccEEHHHHHHcccccccccccccc
cccEcccEEccccccHHHHcccHHHHHHHHccccccccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccEcccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccccccccccc
mvvaqeftvdlnkplvfqvGHLGEAYQEwvhqpivskegprffesDFWEFLTLTVWWAIPVIWLPVVCWCISmsirmgqtlPHVALMVLFGIFVWTLLEYTLHRFLFHIKtkegntihyllhgchhkhpmdglrlvfppaaTAVLLLPFWKVLslvstptttpalfgggllGYVMYDVTHyylhhgqpssevpknlkkyhLNHHfriqnkgfgitsslwdrvfgtlpqtkaaeksk
mvvaqeftvdlnkplVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVIWLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKEGNTIHYLLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVTHYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGtlpqtkaaeksk
MVVAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVIWLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKEGNTIHYLLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVTHYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLPQTKAAEKSK
****QEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVIWLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKEGNTIHYLLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVTHYYLHHGQ****VPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTL**********
****QEFTVDLNKPLVFQVGHLGEAYQEWVHQPIV**EGPRFFESDFWEFLTLTVWWAIPVIWLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKEGNTIHYLLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVTHYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFG************
MVVAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVIWLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKEGNTIHYLLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVTHYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLP*********
*VVAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVIWLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKEGNTIHYLLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVTHYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLP*********
ooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MVVAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVIWLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKEGNTIHYLLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVTHYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLPQTKAAEKSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query236 2.2.26 [Sep-21-2011]
O48916237 Fatty acid 2-hydroxylase yes no 0.995 0.991 0.755 1e-106
Q9SUC5237 Fatty acid 2-hydroxylase no no 0.995 0.991 0.734 1e-102
Q2LAM0372 Fatty acid 2-hydroxylase yes no 0.957 0.607 0.422 2e-49
Q5MPP0372 Fatty acid 2-hydroxylase yes no 0.957 0.607 0.414 7e-49
Q4R4P4372 Fatty acid 2-hydroxylase N/A no 0.957 0.607 0.426 1e-48
Q7L5A8372 Fatty acid 2-hydroxylase yes no 0.957 0.607 0.418 2e-47
Q03529384 Ceramide very long chain yes no 0.898 0.552 0.425 7e-42
O13846347 Ceramide very long chain yes no 0.932 0.634 0.385 4e-37
>sp|O48916|FAH1_ARATH Fatty acid 2-hydroxylase 1 OS=Arabidopsis thaliana GN=FAH1 PE=1 SV=1 Back     alignment and function desciption
 Score =  382 bits (982), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 179/237 (75%), Positives = 200/237 (84%), Gaps = 2/237 (0%)

Query: 2   VVAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPV 61
           +VAQ FTVDL KPLVFQVGHLGE Y+EWVHQPI +KEGPRFF+SDFWEFLTLTVWWA+PV
Sbjct: 1   MVAQGFTVDLKKPLVFQVGHLGEDYEEWVHQPIATKEGPRFFQSDFWEFLTLTVWWAVPV 60

Query: 62  IWLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKE--GNTIHY 119
           IWLPVV WCIS S+ MG +LP +  +V+ GIF+WT  EY LHRF+FHIKTK   GNT HY
Sbjct: 61  IWLPVVVWCISRSVSMGCSLPEIVPIVVMGIFIWTFFEYVLHRFVFHIKTKSYWGNTAHY 120

Query: 120 LLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVT 179
           L+HGCHHKHPMD LRLVFPP ATA+L  PFW +   +STP+T PALFGGG+LGYVMYDVT
Sbjct: 121 LIHGCHHKHPMDHLRLVFPPTATAILCFPFWNIAKAISTPSTAPALFGGGMLGYVMYDVT 180

Query: 180 HYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLPQTKAAEKSK 236
           HYYLHH QP+  V KNLKKYHLNHHFRIQ+KGFGITSSLWD VFGTLP TKA  K +
Sbjct: 181 HYYLHHAQPTRPVTKNLKKYHLNHHFRIQDKGFGITSSLWDIVFGTLPTTKAPRKEQ 237




Fatty acid 2-hydroxylase involved in the alpha-hydroxylation of sphingolipid-associated very long-chain fatty acids (VLCFA). Probably involved in the resistance response to oxidative stress.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -
>sp|Q9SUC5|FAH2_ARATH Fatty acid 2-hydroxylase 2 OS=Arabidopsis thaliana GN=FAH2 PE=1 SV=1 Back     alignment and function description
>sp|Q2LAM0|FA2H_RAT Fatty acid 2-hydroxylase OS=Rattus norvegicus GN=Fa2h PE=1 SV=2 Back     alignment and function description
>sp|Q5MPP0|FA2H_MOUSE Fatty acid 2-hydroxylase OS=Mus musculus GN=Fa2h PE=1 SV=1 Back     alignment and function description
>sp|Q4R4P4|FA2H_MACFA Fatty acid 2-hydroxylase OS=Macaca fascicularis GN=FA2H PE=2 SV=1 Back     alignment and function description
>sp|Q7L5A8|FA2H_HUMAN Fatty acid 2-hydroxylase OS=Homo sapiens GN=FA2H PE=1 SV=1 Back     alignment and function description
>sp|Q03529|SCS7_YEAST Ceramide very long chain fatty acid hydroxylase SCS7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SCS7 PE=1 SV=1 Back     alignment and function description
>sp|O13846|SCS7_SCHPO Ceramide very long chain fatty acid hydroxylase-like protein C19G12.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC19G12.08 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query236
224122174236 predicted protein [Populus trichocarpa] 0.987 0.987 0.8 1e-109
224061599236 predicted protein [Populus trichocarpa] 0.987 0.987 0.795 1e-109
255564345237 sphingolipid fatty acid alpha hydroxylas 0.995 0.991 0.793 1e-109
297740876295 unnamed protein product [Vitis vinifera] 0.995 0.796 0.797 1e-109
225444129237 PREDICTED: fatty acid 2-hydroxylase-like 0.995 0.991 0.797 1e-108
357448649237 Fatty acid 2-hydroxylase [Medicago trunc 0.991 0.987 0.805 1e-108
356555924237 PREDICTED: fatty acid 2-hydroxylase-like 0.991 0.987 0.792 1e-107
356533123236 PREDICTED: fatty acid 2-hydroxylase-like 0.987 0.987 0.778 1e-105
147860330 468 hypothetical protein VITISV_033282 [Viti 0.995 0.502 0.738 1e-104
297823263237 hypothetical protein ARALYDRAFT_345212 [ 0.995 0.991 0.759 1e-104
>gi|224122174|ref|XP_002330558.1| predicted protein [Populus trichocarpa] gi|222872116|gb|EEF09247.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 188/235 (80%), Positives = 215/235 (91%), Gaps = 2/235 (0%)

Query: 2   VVAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPV 61
           +VAQEFTVDL+KPLVFQVGHLGEAY+EWVHQPIVS+EGPRFFESDF E LT TVWWAIP 
Sbjct: 1   MVAQEFTVDLDKPLVFQVGHLGEAYEEWVHQPIVSREGPRFFESDFMESLTRTVWWAIPS 60

Query: 62  IWLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKE--GNTIHY 119
           IWLPV+C+ +  S+RMG TL  VAL+V+ G+F+WTLLEYTLHRFLFHIKTK   GNT+HY
Sbjct: 61  IWLPVICYFVLKSVRMGHTLSEVALIVVGGVFIWTLLEYTLHRFLFHIKTKSYWGNTMHY 120

Query: 120 LLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVT 179
           LLHGCHHKHPMDGLRLVFPPAATA+LL+PFW ++ L STP+TTPALFGGGLLGYV+YD T
Sbjct: 121 LLHGCHHKHPMDGLRLVFPPAATAILLVPFWNMVKLFSTPSTTPALFGGGLLGYVIYDCT 180

Query: 180 HYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLPQTKAAEK 234
           HYYLHHGQP+++VPKNLKKYH+NHHFR+Q+KGFGITSSLWDRVFGTLP +K A+K
Sbjct: 181 HYYLHHGQPANDVPKNLKKYHMNHHFRVQDKGFGITSSLWDRVFGTLPPSKVAKK 235




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061599|ref|XP_002300560.1| predicted protein [Populus trichocarpa] gi|118482950|gb|ABK93387.1| unknown [Populus trichocarpa] gi|222847818|gb|EEE85365.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255564345|ref|XP_002523169.1| sphingolipid fatty acid alpha hydroxylase [Ricinus communis] gi|223537576|gb|EEF39200.1| sphingolipid fatty acid alpha hydroxylase [Ricinus communis] Back     alignment and taxonomy information
>gi|297740876|emb|CBI31058.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225444129|ref|XP_002268031.1| PREDICTED: fatty acid 2-hydroxylase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|357448649|ref|XP_003594600.1| Fatty acid 2-hydroxylase [Medicago truncatula] gi|355483648|gb|AES64851.1| Fatty acid 2-hydroxylase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356555924|ref|XP_003546279.1| PREDICTED: fatty acid 2-hydroxylase-like [Glycine max] Back     alignment and taxonomy information
>gi|356533123|ref|XP_003535117.1| PREDICTED: fatty acid 2-hydroxylase-like [Glycine max] Back     alignment and taxonomy information
>gi|147860330|emb|CAN81862.1| hypothetical protein VITISV_033282 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297823263|ref|XP_002879514.1| hypothetical protein ARALYDRAFT_345212 [Arabidopsis lyrata subsp. lyrata] gi|297325353|gb|EFH55773.1| hypothetical protein ARALYDRAFT_345212 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query236
TAIR|locus:2061564237 FAH1 "AT2G34770" [Arabidopsis 0.995 0.991 0.755 4.1e-104
TAIR|locus:2133054237 FAH2 "AT4G20870" [Arabidopsis 0.987 0.983 0.740 2.1e-100
UNIPROTKB|G4NH69384 MGG_03920 "Inositolphosphorylc 0.894 0.549 0.459 8.8e-47
ASPGD|ASPL0000058435369 AN0918 [Emericella nidulans (t 0.923 0.590 0.443 2.3e-46
FB|FBgn0050502355 fa2h "fatty acid 2-hydroylase" 0.915 0.608 0.412 3.4e-45
SGD|S000004885384 SCS7 "Sphingolipid alpha-hydro 0.906 0.557 0.429 1.2e-44
WB|WBGene00007707316 C25A1.5 [Caenorhabditis elegan 0.911 0.680 0.406 1e-43
UNIPROTKB|Q9XVS0316 C25A1.5 "Protein C25A1.5" [Cae 0.911 0.680 0.406 1e-43
CGD|CAL0001985378 SCS7 [Candida albicans (taxid: 0.940 0.587 0.405 9.3e-43
UNIPROTKB|Q5A668378 SCS7 "Likely fatty acid hydrox 0.940 0.587 0.405 9.3e-43
TAIR|locus:2061564 FAH1 "AT2G34770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1031 (368.0 bits), Expect = 4.1e-104, P = 4.1e-104
 Identities = 179/237 (75%), Positives = 200/237 (84%)

Query:     2 VVAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPV 61
             +VAQ FTVDL KPLVFQVGHLGE Y+EWVHQPI +KEGPRFF+SDFWEFLTLTVWWA+PV
Sbjct:     1 MVAQGFTVDLKKPLVFQVGHLGEDYEEWVHQPIATKEGPRFFQSDFWEFLTLTVWWAVPV 60

Query:    62 IWLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKE--GNTIHY 119
             IWLPVV WCIS S+ MG +LP +  +V+ GIF+WT  EY LHRF+FHIKTK   GNT HY
Sbjct:    61 IWLPVVVWCISRSVSMGCSLPEIVPIVVMGIFIWTFFEYVLHRFVFHIKTKSYWGNTAHY 120

Query:   120 LLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVT 179
             L+HGCHHKHPMD LRLVFPP ATA+L  PFW +   +STP+T PALFGGG+LGYVMYDVT
Sbjct:   121 LIHGCHHKHPMDHLRLVFPPTATAILCFPFWNIAKAISTPSTAPALFGGGMLGYVMYDVT 180

Query:   180 HYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLPQTKAAEKSK 236
             HYYLHH QP+  V KNLKKYHLNHHFRIQ+KGFGITSSLWD VFGTLP TKA  K +
Sbjct:   181 HYYLHHAQPTRPVTKNLKKYHLNHHFRIQDKGFGITSSLWDIVFGTLPTTKAPRKEQ 237




GO:0003824 "catalytic activity" evidence=ISS
GO:0005506 "iron ion binding" evidence=IEA
GO:0006633 "fatty acid biosynthetic process" evidence=IEA
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0043069 "negative regulation of programmed cell death" evidence=IGI
GO:0080132 "fatty acid alpha-hydroxylase activity" evidence=IGI
GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA
GO:0006944 "cellular membrane fusion" evidence=RCA
GO:0000038 "very long-chain fatty acid metabolic process" evidence=IGI;IDA
TAIR|locus:2133054 FAH2 "AT4G20870" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G4NH69 MGG_03920 "Inositolphosphorylceramide-B C-26 hydroxylase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ASPGD|ASPL0000058435 AN0918 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
FB|FBgn0050502 fa2h "fatty acid 2-hydroylase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
SGD|S000004885 SCS7 "Sphingolipid alpha-hydroxylase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
WB|WBGene00007707 C25A1.5 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q9XVS0 C25A1.5 "Protein C25A1.5" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
CGD|CAL0001985 SCS7 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5A668 SCS7 "Likely fatty acid hydroxylase Scs7p" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O48916FAH1_ARATH1, ., -, ., -, ., -0.75520.99570.9915yesno
Q9SUC5FAH2_ARATH1, ., -, ., -, ., -0.73410.99570.9915nono

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_fgenesh4_pg.C_1400080
fatty acid hydroxylase (236 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query236
PLN02434237 PLN02434, PLN02434, fatty acid hydroxylase 1e-159
COG3000271 COG3000, ERG3, Sterol desaturase [Lipid metabolism 2e-13
pfam04116114 pfam04116, FA_hydroxylase, Fatty acid hydroxylase 1e-04
>gnl|CDD|178053 PLN02434, PLN02434, fatty acid hydroxylase Back     alignment and domain information
 Score =  440 bits (1134), Expect = e-159
 Identities = 187/235 (79%), Positives = 208/235 (88%), Gaps = 2/235 (0%)

Query: 3   VAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVI 62
           VAQ+FTVDLNKPLVFQVGHLGE Y+EWVHQPIVSKEGPRFFESD  EFLT TVWWA+P+I
Sbjct: 2   VAQKFTVDLNKPLVFQVGHLGEDYEEWVHQPIVSKEGPRFFESDVLEFLTRTVWWAVPLI 61

Query: 63  WLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKE--GNTIHYL 120
           WLPVVCWC+  S+RMG  L  V LMV FG+F+WTLLEY LHRFLFHIKTK   GNT HYL
Sbjct: 62  WLPVVCWCLVKSVRMGLPLSAVVLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYL 121

Query: 121 LHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVTH 180
           LHGCHHKHPMDGLRLVFPPAATA+L +PFW +++L +TP T PALFGGGLLGYVMYD TH
Sbjct: 122 LHGCHHKHPMDGLRLVFPPAATAILCVPFWNLIALFATPATAPALFGGGLLGYVMYDCTH 181

Query: 181 YYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLPQTKAAEKS 235
           Y+LHHGQPS++V +NLKKYHLNHHFR Q+KGFGITSSLWDRVFGTLP +KAA+K 
Sbjct: 182 YFLHHGQPSTDVLRNLKKYHLNHHFRDQDKGFGITSSLWDRVFGTLPPSKAAKKK 236


Length = 237

>gnl|CDD|225546 COG3000, ERG3, Sterol desaturase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|217907 pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 236
PLN02434237 fatty acid hydroxylase 100.0
KOG0539240 consensus Sphingolipid fatty acid hydroxylase [Lip 100.0
COG3000271 ERG3 Sterol desaturase [Lipid metabolism] 99.86
PF04116114 FA_hydroxylase: Fatty acid hydroxylase superfamily 99.52
PLN02869 620 fatty aldehyde decarbonylase 99.42
KOG0872312 consensus Sterol C5 desaturase [Lipid transport an 98.97
PLN02601303 beta-carotene hydroxylase 98.9
KOG0873283 consensus C-4 sterol methyl oxidase [Lipid transpo 98.67
KOG0874287 consensus Sphingolipid hydroxylase [Lipid transpor 98.3
PF10520178 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme 97.43
KOG3011293 consensus Ubiquitin-conjugating enzyme [Posttransl 96.31
PRK07424 406 bifunctional sterol desaturase/short chain dehydro 95.45
COG5274164 CYB5 Cytochrome b involved in lipid metabolism [En 92.58
cd03512314 Alkane-hydroxylase Alkane hydroxylase is a bacteri 89.63
PLN02601303 beta-carotene hydroxylase 86.17
PLN02220299 delta-9 acyl-lipid desaturase 83.17
>PLN02434 fatty acid hydroxylase Back     alignment and domain information
Probab=100.00  E-value=3e-82  Score=554.29  Aligned_cols=235  Identities=80%  Similarity=1.445  Sum_probs=224.9

Q ss_pred             cccccccccCCChhHHhhhhcchhHHhHhhcCCCCCCCCCCCCcchhhhhcCCccchhhHhHHHHHHHHHHHHhhcCCch
Q 041340            2 VVAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVIWLPVVCWCISMSIRMGQTL   81 (236)
Q Consensus         2 ~~~~~~~~d~~kpl~~qv~~~~~~y~~~v~~p~~~~~~~rlF~~~~lE~~t~t~~~~~p~~w~p~~~~~~~~~~~~~~~~   81 (236)
                      |+++|++||+||||++|||++||+|+||||||+++++++|||+||++|.||||+||++|++|+|+++++++.|++.+.+.
T Consensus         1 ~~~~~~~~d~~kpl~~Qv~~~~~~Y~~~vh~p~~~~~~~rlF~~~~lE~lsrt~w~vvp~iw~pvv~~~~~~~~~~~~~~   80 (237)
T PLN02434          1 MVAQKFTVDLNKPLVFQVGHLGEDYEEWVHQPIVSKEGPRFFESDVLEFLTRTVWWAVPLIWLPVVCWCLVKSVRMGLPL   80 (237)
T ss_pred             CcchhhcccccchhHHHHHHHhHHHHHHhcCCccCCCCCCCCCcHHHHHhcCCchhhhHHHHHHHHHHHHHHHHhcCCcH
Confidence            56889999999999999999999999999999999999999999999999999999999999999999999999877777


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCc--chhhhhhcccCCCCCCCCCCccccchHHHHHHHHHHHHHHHHhhcc
Q 041340           82 PHVALMVLFGIFVWTLLEYTLHRFLFHIKTKE--GNTIHYLLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTP  159 (236)
Q Consensus        82 ~~~~~~~~~g~l~w~~~EY~~HR~lfH~~~~~--~~~~h~~~Hg~HH~~P~D~~rlvfpP~~~~~i~~~~~~l~~~l~~~  159 (236)
                      ...++.+++|+++|+|+||++|||+||.+++.  ++++||++||+||++|+|..|++|||..++++++++|.++.+++++
T Consensus        81 ~~~~~~~~~G~~~wtl~EY~lHRflfH~~p~~~~~~~~hfllHg~HH~~P~D~~rLv~PP~~~~~l~~~~~~l~~~~~~~  160 (237)
T PLN02434         81 SAVVLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYLLHGCHHKHPMDGLRLVFPPAATAILCVPFWNLIALFATP  160 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHhhcCCCCCCCeecCcHHHHHHHHHHHHHHHHHcch
Confidence            77888899999999999999999999999876  7899999999999999999999999999888999999999989888


Q ss_pred             chhhHHHHHHHHHHHHHHHhhhHhhcCCCCCChhhhhhHHHhcccCCCCCCCcccchhhhhhhcCCCCCCccccccC
Q 041340          160 TTTPALFGGGLLGYVMYDVTHYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLPQTKAAEKSK  236 (236)
Q Consensus       160 ~~a~~~~~g~l~gyl~Yd~~Hy~~H~~~~~~~~~~~l~~~H~~HH~~~~~~nfGvt~~lWD~lFGT~~~~~~~~~~~  236 (236)
                      +.+.++++|+++||++||++||++|+.+|++++.|++|++|+.||++|+++||||||++||++|||++++++.++|.
T Consensus       161 ~~a~~~~~G~l~gYl~Yd~~Hy~lH~~~p~~~~~r~lkr~H~~HHfk~~~~~fGVTs~~wD~vFGT~~~~~~~~~s~  237 (237)
T PLN02434        161 ATAPALFGGGLLGYVMYDCTHYFLHHGQPSTDVLRNLKKYHLNHHFRDQDKGFGITSSLWDRVFGTLPPSKAAKKKR  237 (237)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHcCCCCCCCCCcCchHHHHhcCCCCCcchhhccC
Confidence            88999999999999999999999999998889999999999999999999999999999999999999999999884



>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism] Back     alignment and domain information
>COG3000 ERG3 Sterol desaturase [Lipid metabolism] Back     alignment and domain information
>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases Back     alignment and domain information
>PLN02869 fatty aldehyde decarbonylase Back     alignment and domain information
>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02601 beta-carotene hydroxylase Back     alignment and domain information
>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism] Back     alignment and domain information
>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism] Back     alignment and domain information
>PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1 Back     alignment and domain information
>KOG3011 consensus Ubiquitin-conjugating enzyme [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated Back     alignment and domain information
>COG5274 CYB5 Cytochrome b involved in lipid metabolism [Energy production and conversion / Lipid metabolism] Back     alignment and domain information
>cd03512 Alkane-hydroxylase Alkane hydroxylase is a bacterial, integral-membrane di-iron enzyme that shares a requirement for iron and oxygen for activity similar to that of the non-heme integral-membrane acyl coenzyme A (CoA) desaturases and acyl lipid desaturases Back     alignment and domain information
>PLN02601 beta-carotene hydroxylase Back     alignment and domain information
>PLN02220 delta-9 acyl-lipid desaturase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00