Citrus Sinensis ID: 041340
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 236 | ||||||
| 224122174 | 236 | predicted protein [Populus trichocarpa] | 0.987 | 0.987 | 0.8 | 1e-109 | |
| 224061599 | 236 | predicted protein [Populus trichocarpa] | 0.987 | 0.987 | 0.795 | 1e-109 | |
| 255564345 | 237 | sphingolipid fatty acid alpha hydroxylas | 0.995 | 0.991 | 0.793 | 1e-109 | |
| 297740876 | 295 | unnamed protein product [Vitis vinifera] | 0.995 | 0.796 | 0.797 | 1e-109 | |
| 225444129 | 237 | PREDICTED: fatty acid 2-hydroxylase-like | 0.995 | 0.991 | 0.797 | 1e-108 | |
| 357448649 | 237 | Fatty acid 2-hydroxylase [Medicago trunc | 0.991 | 0.987 | 0.805 | 1e-108 | |
| 356555924 | 237 | PREDICTED: fatty acid 2-hydroxylase-like | 0.991 | 0.987 | 0.792 | 1e-107 | |
| 356533123 | 236 | PREDICTED: fatty acid 2-hydroxylase-like | 0.987 | 0.987 | 0.778 | 1e-105 | |
| 147860330 | 468 | hypothetical protein VITISV_033282 [Viti | 0.995 | 0.502 | 0.738 | 1e-104 | |
| 297823263 | 237 | hypothetical protein ARALYDRAFT_345212 [ | 0.995 | 0.991 | 0.759 | 1e-104 |
| >gi|224122174|ref|XP_002330558.1| predicted protein [Populus trichocarpa] gi|222872116|gb|EEF09247.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/235 (80%), Positives = 215/235 (91%), Gaps = 2/235 (0%)
Query: 2 VVAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPV 61
+VAQEFTVDL+KPLVFQVGHLGEAY+EWVHQPIVS+EGPRFFESDF E LT TVWWAIP
Sbjct: 1 MVAQEFTVDLDKPLVFQVGHLGEAYEEWVHQPIVSREGPRFFESDFMESLTRTVWWAIPS 60
Query: 62 IWLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKE--GNTIHY 119
IWLPV+C+ + S+RMG TL VAL+V+ G+F+WTLLEYTLHRFLFHIKTK GNT+HY
Sbjct: 61 IWLPVICYFVLKSVRMGHTLSEVALIVVGGVFIWTLLEYTLHRFLFHIKTKSYWGNTMHY 120
Query: 120 LLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVT 179
LLHGCHHKHPMDGLRLVFPPAATA+LL+PFW ++ L STP+TTPALFGGGLLGYV+YD T
Sbjct: 121 LLHGCHHKHPMDGLRLVFPPAATAILLVPFWNMVKLFSTPSTTPALFGGGLLGYVIYDCT 180
Query: 180 HYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLPQTKAAEK 234
HYYLHHGQP+++VPKNLKKYH+NHHFR+Q+KGFGITSSLWDRVFGTLP +K A+K
Sbjct: 181 HYYLHHGQPANDVPKNLKKYHMNHHFRVQDKGFGITSSLWDRVFGTLPPSKVAKK 235
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224061599|ref|XP_002300560.1| predicted protein [Populus trichocarpa] gi|118482950|gb|ABK93387.1| unknown [Populus trichocarpa] gi|222847818|gb|EEE85365.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255564345|ref|XP_002523169.1| sphingolipid fatty acid alpha hydroxylase [Ricinus communis] gi|223537576|gb|EEF39200.1| sphingolipid fatty acid alpha hydroxylase [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|297740876|emb|CBI31058.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225444129|ref|XP_002268031.1| PREDICTED: fatty acid 2-hydroxylase-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357448649|ref|XP_003594600.1| Fatty acid 2-hydroxylase [Medicago truncatula] gi|355483648|gb|AES64851.1| Fatty acid 2-hydroxylase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356555924|ref|XP_003546279.1| PREDICTED: fatty acid 2-hydroxylase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356533123|ref|XP_003535117.1| PREDICTED: fatty acid 2-hydroxylase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|147860330|emb|CAN81862.1| hypothetical protein VITISV_033282 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297823263|ref|XP_002879514.1| hypothetical protein ARALYDRAFT_345212 [Arabidopsis lyrata subsp. lyrata] gi|297325353|gb|EFH55773.1| hypothetical protein ARALYDRAFT_345212 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 236 | ||||||
| TAIR|locus:2061564 | 237 | FAH1 "AT2G34770" [Arabidopsis | 0.995 | 0.991 | 0.755 | 4.1e-104 | |
| TAIR|locus:2133054 | 237 | FAH2 "AT4G20870" [Arabidopsis | 0.987 | 0.983 | 0.740 | 2.1e-100 | |
| UNIPROTKB|G4NH69 | 384 | MGG_03920 "Inositolphosphorylc | 0.894 | 0.549 | 0.459 | 8.8e-47 | |
| ASPGD|ASPL0000058435 | 369 | AN0918 [Emericella nidulans (t | 0.923 | 0.590 | 0.443 | 2.3e-46 | |
| FB|FBgn0050502 | 355 | fa2h "fatty acid 2-hydroylase" | 0.915 | 0.608 | 0.412 | 3.4e-45 | |
| SGD|S000004885 | 384 | SCS7 "Sphingolipid alpha-hydro | 0.906 | 0.557 | 0.429 | 1.2e-44 | |
| WB|WBGene00007707 | 316 | C25A1.5 [Caenorhabditis elegan | 0.911 | 0.680 | 0.406 | 1e-43 | |
| UNIPROTKB|Q9XVS0 | 316 | C25A1.5 "Protein C25A1.5" [Cae | 0.911 | 0.680 | 0.406 | 1e-43 | |
| CGD|CAL0001985 | 378 | SCS7 [Candida albicans (taxid: | 0.940 | 0.587 | 0.405 | 9.3e-43 | |
| UNIPROTKB|Q5A668 | 378 | SCS7 "Likely fatty acid hydrox | 0.940 | 0.587 | 0.405 | 9.3e-43 |
| TAIR|locus:2061564 FAH1 "AT2G34770" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1031 (368.0 bits), Expect = 4.1e-104, P = 4.1e-104
Identities = 179/237 (75%), Positives = 200/237 (84%)
Query: 2 VVAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPV 61
+VAQ FTVDL KPLVFQVGHLGE Y+EWVHQPI +KEGPRFF+SDFWEFLTLTVWWA+PV
Sbjct: 1 MVAQGFTVDLKKPLVFQVGHLGEDYEEWVHQPIATKEGPRFFQSDFWEFLTLTVWWAVPV 60
Query: 62 IWLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKE--GNTIHY 119
IWLPVV WCIS S+ MG +LP + +V+ GIF+WT EY LHRF+FHIKTK GNT HY
Sbjct: 61 IWLPVVVWCISRSVSMGCSLPEIVPIVVMGIFIWTFFEYVLHRFVFHIKTKSYWGNTAHY 120
Query: 120 LLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVT 179
L+HGCHHKHPMD LRLVFPP ATA+L PFW + +STP+T PALFGGG+LGYVMYDVT
Sbjct: 121 LIHGCHHKHPMDHLRLVFPPTATAILCFPFWNIAKAISTPSTAPALFGGGMLGYVMYDVT 180
Query: 180 HYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLPQTKAAEKSK 236
HYYLHH QP+ V KNLKKYHLNHHFRIQ+KGFGITSSLWD VFGTLP TKA K +
Sbjct: 181 HYYLHHAQPTRPVTKNLKKYHLNHHFRIQDKGFGITSSLWDIVFGTLPTTKAPRKEQ 237
|
|
| TAIR|locus:2133054 FAH2 "AT4G20870" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G4NH69 MGG_03920 "Inositolphosphorylceramide-B C-26 hydroxylase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000058435 AN0918 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| FB|FBgn0050502 fa2h "fatty acid 2-hydroylase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| SGD|S000004885 SCS7 "Sphingolipid alpha-hydroxylase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
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| WB|WBGene00007707 C25A1.5 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9XVS0 C25A1.5 "Protein C25A1.5" [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| CGD|CAL0001985 SCS7 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5A668 SCS7 "Likely fatty acid hydroxylase Scs7p" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_fgenesh4_pg.C_1400080 | fatty acid hydroxylase (236 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 236 | |||
| PLN02434 | 237 | PLN02434, PLN02434, fatty acid hydroxylase | 1e-159 | |
| COG3000 | 271 | COG3000, ERG3, Sterol desaturase [Lipid metabolism | 2e-13 | |
| pfam04116 | 114 | pfam04116, FA_hydroxylase, Fatty acid hydroxylase | 1e-04 |
| >gnl|CDD|178053 PLN02434, PLN02434, fatty acid hydroxylase | Back alignment and domain information |
|---|
Score = 440 bits (1134), Expect = e-159
Identities = 187/235 (79%), Positives = 208/235 (88%), Gaps = 2/235 (0%)
Query: 3 VAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVI 62
VAQ+FTVDLNKPLVFQVGHLGE Y+EWVHQPIVSKEGPRFFESD EFLT TVWWA+P+I
Sbjct: 2 VAQKFTVDLNKPLVFQVGHLGEDYEEWVHQPIVSKEGPRFFESDVLEFLTRTVWWAVPLI 61
Query: 63 WLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKE--GNTIHYL 120
WLPVVCWC+ S+RMG L V LMV FG+F+WTLLEY LHRFLFHIKTK GNT HYL
Sbjct: 62 WLPVVCWCLVKSVRMGLPLSAVVLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYL 121
Query: 121 LHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVTH 180
LHGCHHKHPMDGLRLVFPPAATA+L +PFW +++L +TP T PALFGGGLLGYVMYD TH
Sbjct: 122 LHGCHHKHPMDGLRLVFPPAATAILCVPFWNLIALFATPATAPALFGGGLLGYVMYDCTH 181
Query: 181 YYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLPQTKAAEKS 235
Y+LHHGQPS++V +NLKKYHLNHHFR Q+KGFGITSSLWDRVFGTLP +KAA+K
Sbjct: 182 YFLHHGQPSTDVLRNLKKYHLNHHFRDQDKGFGITSSLWDRVFGTLPPSKAAKKK 236
|
Length = 237 |
| >gnl|CDD|225546 COG3000, ERG3, Sterol desaturase [Lipid metabolism] | Back alignment and domain information |
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| >gnl|CDD|217907 pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 236 | |||
| PLN02434 | 237 | fatty acid hydroxylase | 100.0 | |
| KOG0539 | 240 | consensus Sphingolipid fatty acid hydroxylase [Lip | 100.0 | |
| COG3000 | 271 | ERG3 Sterol desaturase [Lipid metabolism] | 99.86 | |
| PF04116 | 114 | FA_hydroxylase: Fatty acid hydroxylase superfamily | 99.52 | |
| PLN02869 | 620 | fatty aldehyde decarbonylase | 99.42 | |
| KOG0872 | 312 | consensus Sterol C5 desaturase [Lipid transport an | 98.97 | |
| PLN02601 | 303 | beta-carotene hydroxylase | 98.9 | |
| KOG0873 | 283 | consensus C-4 sterol methyl oxidase [Lipid transpo | 98.67 | |
| KOG0874 | 287 | consensus Sphingolipid hydroxylase [Lipid transpor | 98.3 | |
| PF10520 | 178 | Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme | 97.43 | |
| KOG3011 | 293 | consensus Ubiquitin-conjugating enzyme [Posttransl | 96.31 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 95.45 | |
| COG5274 | 164 | CYB5 Cytochrome b involved in lipid metabolism [En | 92.58 | |
| cd03512 | 314 | Alkane-hydroxylase Alkane hydroxylase is a bacteri | 89.63 | |
| PLN02601 | 303 | beta-carotene hydroxylase | 86.17 | |
| PLN02220 | 299 | delta-9 acyl-lipid desaturase | 83.17 |
| >PLN02434 fatty acid hydroxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-82 Score=554.29 Aligned_cols=235 Identities=80% Similarity=1.445 Sum_probs=224.9
Q ss_pred cccccccccCCChhHHhhhhcchhHHhHhhcCCCCCCCCCCCCcchhhhhcCCccchhhHhHHHHHHHHHHHHhhcCCch
Q 041340 2 VVAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVIWLPVVCWCISMSIRMGQTL 81 (236)
Q Consensus 2 ~~~~~~~~d~~kpl~~qv~~~~~~y~~~v~~p~~~~~~~rlF~~~~lE~~t~t~~~~~p~~w~p~~~~~~~~~~~~~~~~ 81 (236)
|+++|++||+||||++|||++||+|+||||||+++++++|||+||++|.||||+||++|++|+|+++++++.|++.+.+.
T Consensus 1 ~~~~~~~~d~~kpl~~Qv~~~~~~Y~~~vh~p~~~~~~~rlF~~~~lE~lsrt~w~vvp~iw~pvv~~~~~~~~~~~~~~ 80 (237)
T PLN02434 1 MVAQKFTVDLNKPLVFQVGHLGEDYEEWVHQPIVSKEGPRFFESDVLEFLTRTVWWAVPLIWLPVVCWCLVKSVRMGLPL 80 (237)
T ss_pred CcchhhcccccchhHHHHHHHhHHHHHHhcCCccCCCCCCCCCcHHHHHhcCCchhhhHHHHHHHHHHHHHHHHhcCCcH
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999877777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCc--chhhhhhcccCCCCCCCCCCccccchHHHHHHHHHHHHHHHHhhcc
Q 041340 82 PHVALMVLFGIFVWTLLEYTLHRFLFHIKTKE--GNTIHYLLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTP 159 (236)
Q Consensus 82 ~~~~~~~~~g~l~w~~~EY~~HR~lfH~~~~~--~~~~h~~~Hg~HH~~P~D~~rlvfpP~~~~~i~~~~~~l~~~l~~~ 159 (236)
...++.+++|+++|+|+||++|||+||.+++. ++++||++||+||++|+|..|++|||..++++++++|.++.+++++
T Consensus 81 ~~~~~~~~~G~~~wtl~EY~lHRflfH~~p~~~~~~~~hfllHg~HH~~P~D~~rLv~PP~~~~~l~~~~~~l~~~~~~~ 160 (237)
T PLN02434 81 SAVVLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYLLHGCHHKHPMDGLRLVFPPAATAILCVPFWNLIALFATP 160 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHhhcCCCCCCCeecCcHHHHHHHHHHHHHHHHHcch
Confidence 77888899999999999999999999999876 7899999999999999999999999999888999999999989888
Q ss_pred chhhHHHHHHHHHHHHHHHhhhHhhcCCCCCChhhhhhHHHhcccCCCCCCCcccchhhhhhhcCCCCCCccccccC
Q 041340 160 TTTPALFGGGLLGYVMYDVTHYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLPQTKAAEKSK 236 (236)
Q Consensus 160 ~~a~~~~~g~l~gyl~Yd~~Hy~~H~~~~~~~~~~~l~~~H~~HH~~~~~~nfGvt~~lWD~lFGT~~~~~~~~~~~ 236 (236)
+.+.++++|+++||++||++||++|+.+|++++.|++|++|+.||++|+++||||||++||++|||++++++.++|.
T Consensus 161 ~~a~~~~~G~l~gYl~Yd~~Hy~lH~~~p~~~~~r~lkr~H~~HHfk~~~~~fGVTs~~wD~vFGT~~~~~~~~~s~ 237 (237)
T PLN02434 161 ATAPALFGGGLLGYVMYDCTHYFLHHGQPSTDVLRNLKKYHLNHHFRDQDKGFGITSSLWDRVFGTLPPSKAAKKKR 237 (237)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHcCCCCCCCCCcCchHHHHhcCCCCCcchhhccC
Confidence 88999999999999999999999999998889999999999999999999999999999999999999999999884
|
|
| >KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >COG3000 ERG3 Sterol desaturase [Lipid metabolism] | Back alignment and domain information |
|---|
| >PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases | Back alignment and domain information |
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| >PLN02869 fatty aldehyde decarbonylase | Back alignment and domain information |
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| >KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02601 beta-carotene hydroxylase | Back alignment and domain information |
|---|
| >KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1 | Back alignment and domain information |
|---|
| >KOG3011 consensus Ubiquitin-conjugating enzyme [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
| >COG5274 CYB5 Cytochrome b involved in lipid metabolism [Energy production and conversion / Lipid metabolism] | Back alignment and domain information |
|---|
| >cd03512 Alkane-hydroxylase Alkane hydroxylase is a bacterial, integral-membrane di-iron enzyme that shares a requirement for iron and oxygen for activity similar to that of the non-heme integral-membrane acyl coenzyme A (CoA) desaturases and acyl lipid desaturases | Back alignment and domain information |
|---|
| >PLN02601 beta-carotene hydroxylase | Back alignment and domain information |
|---|
| >PLN02220 delta-9 acyl-lipid desaturase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00