Citrus Sinensis ID: 041794
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 790 | ||||||
| 255571986 | 817 | conserved hypothetical protein [Ricinus | 0.993 | 0.960 | 0.832 | 0.0 | |
| 225452214 | 817 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.959 | 0.822 | 0.0 | |
| 224055663 | 797 | predicted protein [Populus trichocarpa] | 0.981 | 0.972 | 0.818 | 0.0 | |
| 449455902 | 800 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.978 | 0.769 | 0.0 | |
| 356513831 | 821 | PREDICTED: uncharacterized protein LOC10 | 0.983 | 0.946 | 0.760 | 0.0 | |
| 377652303 | 898 | peptidyl serine alpha-galactosyltransfer | 0.916 | 0.806 | 0.780 | 0.0 | |
| 356560530 | 1226 | PREDICTED: uncharacterized protein LOC10 | 0.879 | 0.566 | 0.800 | 0.0 | |
| 297828572 | 799 | hypothetical protein ARALYDRAFT_477342 [ | 0.973 | 0.962 | 0.729 | 0.0 | |
| 22330795 | 802 | uncharacterized protein [Arabidopsis tha | 0.977 | 0.962 | 0.730 | 0.0 | |
| 6016729 | 814 | unknown protein [Arabidopsis thaliana] g | 0.977 | 0.948 | 0.718 | 0.0 |
| >gi|255571986|ref|XP_002526934.1| conserved hypothetical protein [Ricinus communis] gi|223533686|gb|EEF35421.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1394 bits (3609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/786 (83%), Positives = 715/786 (90%), Gaps = 1/786 (0%)
Query: 6 QEAPYRIHTLFSVECRNYFDWQTVGLMRSFKKAGQPGPVTRLLSCTDEDMKKYKGMHLAP 65
Q++PYRIHTLFSVEC+NYFDWQTVGLM SFKKA QPGP+TRLLSCTDE+ K YKGMHLAP
Sbjct: 20 QDSPYRIHTLFSVECQNYFDWQTVGLMHSFKKAKQPGPITRLLSCTDEEKKNYKGMHLAP 79
Query: 66 TMEVPSMSRHPKTGDWYPAINKPAGIVHWLKHSKDAENVDWVVILDADMIIRGPIIPWEL 125
TMEVPSMSRHPKTGDWYPAINKPAGIVHWLKHSKDAENVDWVVILDADMIIRGPIIPWEL
Sbjct: 80 TMEVPSMSRHPKTGDWYPAINKPAGIVHWLKHSKDAENVDWVVILDADMIIRGPIIPWEL 139
Query: 126 GAEKGRPVAALYGYLIGCNNILAKLHTKHPELCDKVGGLLAMHIDDLRALAPLWLSKTEE 185
GAEKGRPVAA YGYL+GC+NILA+LHTKHPELCDKVGGLLAMH+DDLRALAP+WLSKTEE
Sbjct: 140 GAEKGRPVAAYYGYLVGCDNILAQLHTKHPELCDKVGGLLAMHMDDLRALAPMWLSKTEE 199
Query: 186 VREDRAHWATNITGDIYASGWISEMYGYSFGAAEVGLRHKINDDLMIYPGYIPREGVEPI 245
VREDRAHWATNITGDIY GWISEMYGYSFGAAEVGL+HKINDDLMIYPGY PR GV+PI
Sbjct: 200 VREDRAHWATNITGDIYGQGWISEMYGYSFGAAEVGLQHKINDDLMIYPGYTPRPGVQPI 259
Query: 246 LLHYGLPFRVGNWSFSKLEHHEDNIVYDCGRLFPEPPYPREVKEMEPDPNQRRALFLNIE 305
LLHYGLPF VGNWSF+KL HHED+IVYDC RLFPEPPYPREVK ME DPN+RR LFL+IE
Sbjct: 260 LLHYGLPFSVGNWSFTKLNHHEDDIVYDCDRLFPEPPYPREVKLMESDPNKRRGLFLSIE 319
Query: 306 CINTINEGLLLQHTANGCPKPKWSRYLSFLKSKSFAELTRPKLLNHLNILAKAAGQQQAI 365
CINT+NEGLLLQH ANGC KPKWS+YLSFLKSK+FAELTRPKLL +I +A +QQ I
Sbjct: 320 CINTLNEGLLLQHAANGCAKPKWSKYLSFLKSKTFAELTRPKLLTSESIKTEAENEQQVI 379
Query: 366 GEPRRPYPKIHTIFSTECTPYFDWQTVGLVHSFHLSGQPGNITRLLSCTDEDLKKYEGHD 425
+P +P+PKIHTIFSTECTPYFDWQTVGLVHSFHLSGQPGNITRLLSCT+EDLK Y GHD
Sbjct: 380 DDPEKPHPKIHTIFSTECTPYFDWQTVGLVHSFHLSGQPGNITRLLSCTEEDLKHYAGHD 439
Query: 426 LAPTHYVPSMSQHPLTGDWYPAINKPAAVLHWLNHADTDAEFIVILDADMIMRGPITPWE 485
LAPTHYVPSMS+HPLTGDWYPAINKPAAVLHWLNHAD DAEFIVILDADMI+RGPITPWE
Sbjct: 440 LAPTHYVPSMSRHPLTGDWYPAINKPAAVLHWLNHADIDAEFIVILDADMILRGPITPWE 499
Query: 486 YKAERGRPVSTPYDYLIGCNNELAKLHTRHPDACDKVGGVIIMHIDDLRKFAMLWLHKTE 545
YKA RGRPVSTPYDYLIGC+NELAKLHTR+PDACDKVGG+IIMHI+DLRKFAMLWLHKTE
Sbjct: 500 YKAARGRPVSTPYDYLIGCDNELAKLHTRYPDACDKVGGIIIMHIEDLRKFAMLWLHKTE 559
Query: 546 EVRADKAHYSRNITGDVYESGWISEMYGYSFGAAELKLRHIINRKILIYPGYIPEPGVKY 605
EVRADKAHY+ N TGD+Y SGWISEMYGYSFGAAEL+L+HII+R ILIYPGYIPEPGVKY
Sbjct: 560 EVRADKAHYATNFTGDIYNSGWISEMYGYSFGAAELQLQHIISRDILIYPGYIPEPGVKY 619
Query: 606 RVFHYGLEFSVGNWSFDKANWRDADMVNKCWAQFPEPPDPSTLDRSDKNILQRDLLSIEC 665
RVFHYGLEF VGNWSFDKANWRD DMVNKCWA+FP+PPDPSTLDR+D +ILQRD LSIEC
Sbjct: 620 RVFHYGLEFKVGNWSFDKANWRDTDMVNKCWAKFPDPPDPSTLDRTDNDILQRDRLSIEC 679
Query: 666 AKKLNEALRLHHKRRNCPDPSSLSKSISDMTEEVVNHRKFGIVNQIHHAVS-MPRNHSME 724
A+KLNEAL LHHK+R CPD SSLS S SD +E ++ RKFG +++ + A S +P HS E
Sbjct: 680 ARKLNEALFLHHKKRKCPDASSLSNSNSDTAKEAISSRKFGKIDEGNVARSNIPIRHSQE 739
Query: 725 SSVPAEKDGLFSSLRFWVIAIWAFCGLGFLLVMFVLFSGCKGKGPRSKSYRSKRRSSYSG 784
+S+PA KDGLF SLR WVI +WA G+GF+ VM ++F G + KG + K YR+KRRSSYSG
Sbjct: 740 TSLPAMKDGLFGSLRIWVIVLWAVSGVGFIAVMLMVFLGHRSKGAKGKGYRNKRRSSYSG 799
Query: 785 FLDMNG 790
FLD NG
Sbjct: 800 FLDTNG 805
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225452214|ref|XP_002271170.1| PREDICTED: uncharacterized protein LOC100242361 [Vitis vinifera] gi|296081317|emb|CBI17699.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224055663|ref|XP_002298591.1| predicted protein [Populus trichocarpa] gi|222845849|gb|EEE83396.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449455902|ref|XP_004145689.1| PREDICTED: uncharacterized protein LOC101221472 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356513831|ref|XP_003525612.1| PREDICTED: uncharacterized protein LOC100776740 [Glycine max] | Back alignment and taxonomy information |
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| >gi|377652303|dbj|BAL63045.1| peptidyl serine alpha-galactosyltransferase [Nicotiana tabacum] | Back alignment and taxonomy information |
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| >gi|356560530|ref|XP_003548544.1| PREDICTED: uncharacterized protein LOC100783769 [Glycine max] | Back alignment and taxonomy information |
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| >gi|297828572|ref|XP_002882168.1| hypothetical protein ARALYDRAFT_477342 [Arabidopsis lyrata subsp. lyrata] gi|297328008|gb|EFH58427.1| hypothetical protein ARALYDRAFT_477342 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|22330795|ref|NP_566148.2| uncharacterized protein [Arabidopsis thaliana] gi|18175797|gb|AAL59929.1| unknown protein [Arabidopsis thaliana] gi|20465701|gb|AAM20319.1| unknown protein [Arabidopsis thaliana] gi|332640186|gb|AEE73707.1| uncharacterized protein [Arabidopsis thaliana] gi|377652301|dbj|BAL63044.1| peptidyl serine alpha-galactosyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|6016729|gb|AAF01555.1|AC009325_25 unknown protein [Arabidopsis thaliana] gi|6091716|gb|AAF03428.1|AC010797_4 unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 790 | ||||||
| TAIR|locus:2082314 | 802 | AT3G01720 "AT3G01720" [Arabido | 0.953 | 0.938 | 0.726 | 0.0 | |
| TAIR|locus:2185046 | 358 | AT5G13500 "AT5G13500" [Arabido | 0.297 | 0.656 | 0.237 | 8.8e-09 | |
| TAIR|locus:504955105 | 366 | AT5G25265 "AT5G25265" [Arabido | 0.318 | 0.688 | 0.254 | 1.5e-08 | |
| TAIR|locus:2059573 | 358 | AT2G25260 "AT2G25260" [Arabido | 0.297 | 0.656 | 0.236 | 6.7e-06 |
| TAIR|locus:2082314 AT3G01720 "AT3G01720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 3146 (1112.5 bits), Expect = 0., P = 0.
Identities = 556/765 (72%), Positives = 649/765 (84%)
Query: 6 QEAPYRIHTLFSVECRNYFDWQTVGLMRSFKKAGQPGPVTRLLSCTDEDMKKYKGMHLAP 65
Q APYRIHTLFSVEC+NYFDWQTVGLM SF K+GQPGP+TRLLSCTD+ K Y+GM+LAP
Sbjct: 24 QMAPYRIHTLFSVECQNYFDWQTVGLMHSFLKSGQPGPITRLLSCTDDQKKTYRGMNLAP 83
Query: 66 TMEVPSMSRHPKTGDWYPAINKPAGIVHWLKHSKDAENVDWVVILDADMIIRGPIIPWEL 125
T EVPS SRHPKTGDWYPAINKP G+++WL+HS++A++VDWVVILDADMIIRGPIIPWEL
Sbjct: 84 TFEVPSWSRHPKTGDWYPAINKPVGVLYWLQHSEEAKHVDWVVILDADMIIRGPIIPWEL 143
Query: 126 GAEKGRPVAALYGYLIGCNNILAKLHTKHPELCDKVGGLLAMHIDDLRALAPLWLSKTEE 185
GAE+GRP AA YGYL+GC+N+L +LHTKHPELCDKVGGLLAMHIDDLR LAPLWLSKTE+
Sbjct: 144 GAERGRPFAAHYGYLVGCDNLLVRLHTKHPELCDKVGGLLAMHIDDLRVLAPLWLSKTED 203
Query: 186 VREDRAHWATNITGDIYASGWISEMYGYSFGAAEVGLRHKINDDLMIYPGYIPREGVEPI 245
VR+D AHW TN+TGDIY GWISEMYGYSFGAAE GL+HKINDDLMIYPGY+PREGVEP+
Sbjct: 204 VRQDTAHWTTNLTGDIYGKGWISEMYGYSFGAAEAGLKHKINDDLMIYPGYVPREGVEPV 263
Query: 246 LLHYGLPFRVGNWSFSKLEHHEDNIVYDCGRLFPEPPYPREVKEMEPDPNQRRALFLNIE 305
L+HYGLPF +GNWSF+KL+HHEDNIVYDC RLFPEPPYPREVK MEPDP++RR L L++E
Sbjct: 264 LMHYGLPFSIGNWSFTKLDHHEDNIVYDCNRLFPEPPYPREVKIMEPDPSKRRGLILSLE 323
Query: 306 CINTINEGLLLQHTANGCPKPKWSRYLSFLKSKSFAELTRPKLL--NHLNILAKAAGQQQ 363
C+NT+NEGL+L+H NGCPKPKW++YLSFLKSK+F ELTRPKLL ++IL +
Sbjct: 324 CMNTLNEGLILRHAENGCPKPKWTKYLSFLKSKTFMELTRPKLLAPGSVHILPDQH-EPP 382
Query: 364 AIGEPRRPYPKIHTIFSTECTPYFDWQTVGLVHSFHLSGQPGNITRLLSCTDEDLKKYEG 423
I E + YPKIHT+FSTECT YFDWQTVG +HSF SGQPGNITRLLSCTDE LK Y+G
Sbjct: 383 PIDEFKGTYPKIHTLFSTECTTYFDWQTVGFMHSFRQSGQPGNITRLLSCTDEALKNYKG 442
Query: 424 HDLAPTHYVPSMSQHPLTGDWYPAINKPAAVLHWLNHADTDAEFIVILDADMIMRGPITP 483
HDLAPTHYVPSMS+HPLTGDWYPAINKPAAV+HWL+H + DAE++VILDADMI+RGPITP
Sbjct: 443 HDLAPTHYVPSMSRHPLTGDWYPAINKPAAVVHWLHHTNIDAEYVVILDADMILRGPITP 502
Query: 484 WEYKAERGRPVSTPYDYLIGCNNELAKLHTRHPDACDKVGGVIIMHIDDLRKFAMLWLHK 543
WE+KA RGRPVSTPYDYLIGC+N+LA+LHTR+P+ACDKVGGVIIMHI+DLRKFAM WL K
Sbjct: 503 WEFKAARGRPVSTPYDYLIGCDNDLARLHTRNPEACDKVGGVIIMHIEDLRKFAMYWLLK 562
Query: 544 TEEVRADKAHYSRNITGDVYESGWISEMYGYSFGAAELKLRHIINRKILIYPGYIPEPGV 603
T+EVRADK HY + +TGD+YESGWISEMYGYSFGAAEL LRH IN++I+IYPGY+PEPG
Sbjct: 563 TQEVRADKEHYGKELTGDIYESGWISEMYGYSFGAAELNLRHSINKEIMIYPGYVPEPGA 622
Query: 604 KYRVFHYGLEFSVGNWSFDKANWRDADMVNKCWAQFPEPPDPSTLDRSDKNILQRDLLSI 663
YRVFHYGLEF VGNWSFDKANWR+ D++NKCWA+FP+PP PS + ++D ++ QRDLLSI
Sbjct: 623 DYRVFHYGLEFKVGNWSFDKANWRNTDLINKCWAKFPDPPSPSAVHQTDNDLRQRDLLSI 682
Query: 664 ECAKKLNEALRLHHKRRNCPDPSSLSKSISDMTEEVVNHRKFGIVNQIHHAVSMPRNHSM 723
EC +KLNEAL LHHKRRNCP+P S S TE++ RK G I + + +
Sbjct: 683 ECGQKLNEALFLHHKRRNCPEPGSES------TEKISVSRKVG---NIETKQTQGSDETK 733
Query: 724 ESSVPAEKDGLFSSLRFWVIAIWAXXXXXXXXXXXXXXSGCKGKG 768
ESS +E +G FS+L+ WVIA+W S +G+G
Sbjct: 734 ESSGSSESEGRFSTLKLWVIALWLISGVGFLVVMLLVFSTRRGRG 778
|
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| TAIR|locus:2185046 AT5G13500 "AT5G13500" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:504955105 AT5G25265 "AT5G25265" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2059573 AT2G25260 "AT2G25260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 790 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 1e-07
Identities = 79/565 (13%), Positives = 139/565 (24%), Gaps = 193/565 (34%)
Query: 3 PHKQEAPYRIHTLF-------------SVECRNYFDWQTVGLMRSFKKAG-QPGPVTRL- 47
R+ V NY + LM K QP +TR+
Sbjct: 58 KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINY-KF----LMSPIKTEQRQPSMMTRMY 112
Query: 48 LSCTDEDMKKYKGMHLAPTMEVP-------------SMSRHP-----------KTGDW-- 81
+ D + Y + V + KT W
Sbjct: 113 IEQRD---RLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKT--WVA 167
Query: 82 ------YPAINKPAGIVHWLKHSKDAENVDWVVIL-------DADMIIRGPI---IPWEL 125
Y K + WL + +L D + R I +
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227
Query: 126 GAEKGRP----VAALY--GYLI---------------GCN-----------NILAKLHTK 153
+ + + Y L+ C + L+ T
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTT 287
Query: 154 HPELCDKVGGL------------LAMHIDDLRALA----PLWLSK-TEEVREDRAHWAT- 195
H L L L DL P LS E +R+ A W
Sbjct: 288 HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW 347
Query: 196 -NITGDIYASGWISEMYGYSFGAAEVGLRHKINDDLMIYPG--YIPREGVEPILLHYGLP 252
++ D + I E S E K+ D L ++P +IP + ++
Sbjct: 348 KHVNCDKLTT--IIES---SLNVLEPAEYRKMFDRLSVFPPSAHIP-TILLSLI------ 395
Query: 253 FRVGNWSFSKLEHHEDNIVYDCGR--LFPEPPYPREVK------EMEPDPNQRRALFLNI 304
W +V + L + P + E++ AL +
Sbjct: 396 -----WFDVIKSDVMV-VVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL--HR 447
Query: 305 ECINTINEGLLLQHTANGCPKPKWSRYLSFLKSKSFAELTRPKLLNHLNILAKAAGQQQA 364
++ N + ++ P +Y ++ + HL K +
Sbjct: 448 SIVDHYN--IPKTFDSDDLIPPYLDQYF-------YSHIGH-----HL----KNIEHPER 489
Query: 365 IGEPRRPYPKIHTIFSTECTPYFDWQTVGLVHSFHLSGQPGNITRLLSCTDEDLKKYEGH 424
+ R + F + + H G+I L LK Y+ +
Sbjct: 490 MTLFRMVF------LD------FRFLEQKIRHDSTAWNASGSILNTLQ----QLKFYKPY 533
Query: 425 --DLAPT---------HYVPSMSQH 438
D P ++P + ++
Sbjct: 534 ICDNDPKYERLVNAILDFLPKIEEN 558
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00