Citrus Sinensis ID: 042048

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
Protein Sequence
MAEIATGMKTLMDFPHLGGGLIVSLEVGDWDGHQKRSLLIDHGLFEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRKLPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHccHHHHccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccHHccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccHHHHHHccHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MAEIATGMKtlmdfphlggglivslevgdwdghqkrsllIDHGlfevimlpfdrhlspqnvRKVVseadgyqphliapeqGYRRLIDSALNyfrgpaeasVDAVHFVLKELVRRSigetqelkrfptLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRKLPqdiervgnptapsaadryteghfrrigsNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDeidsvswtr
Flexible Loop (DISEMBL)
MAEIATGMKTLMDFPHLGGGLIVSLEVGDWDGHQKRSLLIDHGLFEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRrsigetqelkrfptlqSEIAAAANealerfrddskkttMRLVEMESSYLTVDFFRKLPQDiervgnptapsaadryteghfRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLElyksardeidsvswtr
Low Complexity Region (SEG)
MAEIATGMKTLMDFPHLGGGLIVSLEVGDWDGHQKRSLLIDHGLFEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRKLPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR
Disordered region (IsUnstruct)
*******MKTLMDFPHLGGGLIVSLEVGDWDGHQKRSLLIDHGLFEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRRSIGETQELKRF****************************LVEMESSYLTVDFFRKLPQDI**************YTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGK********************************************
Disordered Region (DISOPRED)
******G*KTLMDFPHLGGGLIVSLEVGDWDGHQKRSLLIDHGLFEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEA***********TMRLVEMESSYLTVDFFRKLPQDIER***************GHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLG**********LDEDPMLMERRQQCAKRLELYKSARDEIDSVSWT*
Disordered Region (DISEMBL)
MAEIATGMKTLMDFPHLGGGLIVSLEVGDWDGHQKRSLLIDHGLFEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRKLPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR
Disordered Region (DISPRO)
****ATGMKTLMDFPHLGGGLIVSLEVGDWDGHQKRSLLIDHGLFEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRKLPQDI***********ADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAEIATGMKTLMDFPHLGGGLIVSLEVGDWDGHQKRSLLIDHGLFEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRKLPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	286	2.2.26 [Sep-21-2011]
Q9FNX5	624	Dynamin-related protein 1	yes	no	0.828	0.379	0.725	1e-101
Q8LF21	614	Dynamin-related protein 1	no	no	0.860	0.400	0.7	9e-98
Q8S3C9	612	Dynamin-related protein 1	no	no	0.828	0.387	0.666	3e-95
Q39828	610	Dynamin-related protein 5	no	no	0.825	0.386	0.620	2e-86
Q84XF3	610	Dynamin-related protein 1	no	no	0.902	0.422	0.584	1e-85
P42697	610	Dynamin-related protein 1	no	no	0.825	0.386	0.616	2e-85
Q39821	610	Dynamin-related protein 1	no	no	0.825	0.386	0.603	1e-84
Q9LQ55	920	Dynamin-2B OS=Arabidopsis	no	no	0.423	0.131	0.429	1e-22
Q9SE83	914	Dynamin-2A OS=Arabidopsis	no	no	0.423	0.132	0.438	2e-22

>sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1

 Score =  369 bits (948), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 177/244 (72%), Positives = 215/244 (88%), Gaps = 7/244 (2%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           LPFDRHLS Q+V+K+VSEADGYQPHLIAPEQGYRRLI+ AL YFRGPAEASVDAVH+VLK
Sbjct: 381 LPFDRHLSLQSVKKIVSEADGYQPHLIAPEQGYRRLIEGALGYFRGPAEASVDAVHYVLK 440

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           ELVR+SI ET+ELKRFP+LQ E+AAAAN +LE+FR++SKK+ +RLV+MES+YLT +FFRK
Sbjct: 441 ELVRKSISETEELKRFPSLQVELAAAANSSLEKFREESKKSVIRLVDMESAYLTAEFFRK 500

Query: 170 LPQDIER----VGNPTA-PSAA--DRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVH 222
           LPQ+IER      N TA PS+A  D+Y +GHFRRI SNVS+YV MVS+TL+NTIPKA V+
Sbjct: 501 LPQEIERPVTNSKNQTASPSSATLDQYGDGHFRRIASNVSAYVNMVSDTLRNTIPKACVY 560

Query: 223 CQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSV 282
           CQV++AK +LL++FY+Q+ K+EGKQL QLLDEDP LM+RR +CAKRLELYK ARDEID+V
Sbjct: 561 CQVRQAKLALLNYFYSQISKREGKQLGQLLDEDPALMDRRLECAKRLELYKKARDEIDAV 620

Query: 283 SWTR 286
           +W R
Sbjct: 621 AWVR 624

Microtubule-associated force-producing protein that is targeted to the tubulo-vesicular network of the forming cell plate during cytokinesis. Plays also a major role in plasma membrane maintenance and cell wall integrity with an implication in vesicular trafficking, polar cell expansion, and other aspects of plant growth and development.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2

 Score =  356 bits (914), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 175/250 (70%), Positives = 215/250 (86%), Gaps = 4/250 (1%)

Query: 39  LIDHGLFEVIM-LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPA 97
           + DH L   +  LPFDRHLS +NV+KVVSEADGYQPHLIAPEQGYRRLID +++YF+GPA
Sbjct: 364 VFDHQLPAALKKLPFDRHLSTKNVQKVVSEADGYQPHLIAPEQGYRRLIDGSISYFKGPA 423

Query: 98  EASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEM 157
           EA+VDAVHFVLKELVR+SI ET+ELKRFPTL S+IAAAANEALERFRD+S+KT +RLV+M
Sbjct: 424 EATVDAVHFVLKELVRKSISETEELKRFPTLASDIAAAANEALERFRDESRKTVLRLVDM 483

Query: 158 ESSYLTVDFFRKLPQDIERVG-NP-TAPSA-ADRYTEGHFRRIGSNVSSYVGMVSETLKN 214
           ESSYLTV+FFRKL  + E+   NP  AP+  AD Y++ HFR+IGSNVS+Y+ MV +TL+N
Sbjct: 484 ESSYLTVEFFRKLHLEPEKEKPNPRNAPAPNADPYSDNHFRKIGSNVSAYINMVCDTLRN 543

Query: 215 TIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKS 274
           ++PKAVV+CQV+EAKRSLL+ FYAQ+G+KE ++L  +LDEDP LMERR   AKRLELYK 
Sbjct: 544 SLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAMLDEDPQLMERRGTLAKRLELYKQ 603

Query: 275 ARDEIDSVSW 284
           ARD+ID+V+W
Sbjct: 604 ARDDIDAVAW 613

Microtubule-associated force-producing protein that is targeted to the growing edges of the cell plate during cytokinesis. Plays also a major role in plasma membrane maintenance during pollen maturation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8S3C9|DRP1D_ARATH Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2

 Score =  348 bits (892), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 158/237 (66%), Positives = 203/237 (85%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           LPFDRHLS Q+V+++VSE+DGYQPHLIAPE GYRRLI+ +LN+FRGPAEASV+A+H +LK
Sbjct: 376 LPFDRHLSLQSVKRIVSESDGYQPHLIAPELGYRRLIEGSLNHFRGPAEASVNAIHLILK 435

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           ELVR++I ET+ELKRFP+LQ E+ AAAN +L++FR++S K+ +RLV+MESSYLTVDFFRK
Sbjct: 436 ELVRKAIAETEELKRFPSLQIELVAAANSSLDKFREESMKSVLRLVDMESSYLTVDFFRK 495

Query: 170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
           L  + + +   +  SA D+Y +GHFR+I SNV++Y+ MV+ETL NTIPKAVVHCQV++AK
Sbjct: 496 LHVESQNMSLSSPTSAIDQYGDGHFRKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAK 555

Query: 230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
            SLL++FYAQ+ + +GK+L QLLDE+P LMERR QCAKRLELYK ARDEID+  W R
Sbjct: 556 LSLLNYFYAQISQSQGKRLGQLLDENPALMERRMQCAKRLELYKKARDEIDAAVWVR 612

Putative microtubule-associated force-producing protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A OS=Glycine max PE=2 SV=1

 Score =  318 bits (816), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 147/237 (62%), Positives = 197/237 (83%), Gaps = 1/237 (0%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           L FD+ LS +N+RK+++EADGYQPHLIAPEQGYRRLI+S+L   RGPAEA+VDAVH +LK
Sbjct: 375 LQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESSLITIRGPAEAAVDAVHSLLK 434

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           +LV ++I ET +LK++P L+ E+ AAA ++LER RD+SK+ T++LV+ME  YLTVDFFRK
Sbjct: 435 DLVHKAISETLDLKQYPGLRVEVGAAAVDSLERMRDESKRATLQLVDMECGYLTVDFFRK 494

Query: 170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
           LPQD+++ GNPT  S  DRY + + RRIG+ + SYV MV  TL+N+IPK++V+CQV+EAK
Sbjct: 495 LPQDVDKGGNPTH-SIFDRYNDSYLRRIGTTILSYVNMVCATLRNSIPKSIVYCQVREAK 553

Query: 230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
           RSLLDHF+ +LGK E K+L+ LL+EDP +MERR   AKRLELY+SA+ EID+V+W++
Sbjct: 554 RSLLDHFFTELGKMETKRLSSLLNEDPAIMERRSALAKRLELYRSAQAEIDAVAWSK 610

Microtubule-associated force-producing protein.

Glycine max (taxid: 3847)

>sp|Q84XF3|DRP1B_ARATH Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1

 Score =  316 bits (809), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 152/260 (58%), Positives = 205/260 (78%), Gaps = 2/260 (0%)

Query: 28  GDWDGHQKRSLLIDHGLFEVIM-LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLI 86
           G   G +K + + D+     I  L FD+HLS  NVRK+++EADGYQPHLIAPEQGYRRLI
Sbjct: 352 GTRSGGEKINSVFDNQFPAAIKRLQFDKHLSMDNVRKLITEADGYQPHLIAPEQGYRRLI 411

Query: 87  DSALNYFRGPAEASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDD 146
           +S L   RGPAEA+VDAVH +LK+L+ +S+GET ELK++PTL+ E++ AA ++L+R RD+
Sbjct: 412 ESCLVSIRGPAEAAVDAVHSILKDLIHKSMGETSELKQYPTLRVEVSGAAVDSLDRMRDE 471

Query: 147 SKKTTMRLVEMESSYLTVDFFRKLPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVG 206
           S+K T+ LV+MES YLTV+FFRKLPQD E+ GNPT  S  DRY + + RRIGSNV SYV 
Sbjct: 472 SRKATLLLVDMESGYLTVEFFRKLPQDSEKGGNPTH-SIFDRYNDAYLRRIGSNVLSYVN 530

Query: 207 MVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCA 266
           MV   L+N+IPK++V+CQV+EAKRSLLD F+ +LG+KE  +L++LLDEDP + +RR   A
Sbjct: 531 MVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLDEDPAVQQRRTSIA 590

Query: 267 KRLELYKSARDEIDSVSWTR 286
           KRLELY+SA+ +I++V+W++
Sbjct: 591 KRLELYRSAQTDIEAVAWSK 610

Putative microtubule-associated force-producing protein.

Arabidopsis thaliana (taxid: 3702)

>sp|P42697|DRP1A_ARATH Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3

 Score =  315 bits (808), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 146/237 (61%), Positives = 194/237 (81%), Gaps = 1/237 (0%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           L FD+ L+  N+RK+V+EADGYQPHLIAPEQGYRRLI+S++   RGPAEASVD VH +LK
Sbjct: 375 LQFDKQLAMDNIRKLVTEADGYQPHLIAPEQGYRRLIESSIVSIRGPAEASVDTVHAILK 434

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           +LV +S+ ET ELK++P L+ E+  AA E+L++ R+ SKK T++LV+ME SYLTVDFFRK
Sbjct: 435 DLVHKSVNETVELKQYPALRVEVTNAAIESLDKMREGSKKATLQLVDMECSYLTVDFFRK 494

Query: 170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
           LPQD+E+ GNPT  S  DRY + + RRIGSNV SYV MV   L+N+IPK++V+CQV+EAK
Sbjct: 495 LPQDVEKGGNPTH-SIFDRYNDSYLRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAK 553

Query: 230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
           RSLLDHF+A+LG  + K+L+ LL+EDP +MERR   +KRLELY++A+ EID+V+W++
Sbjct: 554 RSLLDHFFAELGTMDMKRLSSLLNEDPAIMERRSAISKRLELYRAAQSEIDAVAWSK 610

Microtubule-associated force-producing protein that is targeted to the forming cell plate during cytokinesis. Plays also a major role in plasma membrane maintenance and cell wall integrity with implications in vesicular trafficking, polar cell expansion, vascular formation, and other aspects of plant growth and development. Has a GTPase activity.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39821|SDLCA_SOYBN Dynamin-related protein 12A OS=Glycine max PE=1 SV=1

 Score =  313 bits (801), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 143/237 (60%), Positives = 197/237 (83%), Gaps = 1/237 (0%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           L FD+ LS +N+RK+++EADGYQPHLIAPEQGYRRLI+S+L   RGPAE++VDAVH +LK
Sbjct: 375 LQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESSLITIRGPAESAVDAVHSLLK 434

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           +LV +++ ET +LK++P L+ E+ AA+ ++LER RD+SK+ T++LV+ME  YLTVDFFRK
Sbjct: 435 DLVHKAMSETLDLKQYPGLRVEVGAASVDSLERMRDESKRATLQLVDMECGYLTVDFFRK 494

Query: 170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
           LPQD+++ GNPT  S  DRY + + RRIG+ + SYV MV  TL+++IPK++V+CQV+EAK
Sbjct: 495 LPQDVDKGGNPTH-SICDRYNDSYLRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAK 553

Query: 230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
           RSLLDHF+ +LGK E K+L+ LL+EDP +MERR   AKRLELY+SA+ EID+V+W++
Sbjct: 554 RSLLDHFFTELGKMEIKRLSSLLNEDPAIMERRSALAKRLELYRSAQAEIDAVAWSK 610

Microtubule-associated force-producing protein that is targeted to the forming cell plate during cytokinesis. May be involved in attaching Golgi-derived vesicles to microtubules which direct vesicles to the forming cell plate during cytokinesis. Possesses intrinsic GTPase activity in vitro.

Glycine max (taxid: 3847)

>sp|Q9LQ55|DRP2B_ARATH Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2

 Score =  107 bits (267), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 77/121 (63%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           LP DRH    NV+++V EADGYQP+LI+PE+G R LI + L   + PA   VD VH VL 
Sbjct: 378 LPLDRHFDLNNVKRIVLEADGYQPYLISPEKGLRSLIKTVLELAKDPARLCVDEVHRVLV 437

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           ++V  S   T  L R+P  + E+ A A+ AL+ F++++KK  + LV+ME +++    F +
Sbjct: 438 DIVSASANATPGLGRYPPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIR 497

Query: 170 L 170
           L
Sbjct: 498 L 498

Putative microtubule-associated force-producing protein, able to bind and hydrolyze GTP.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q9SE83|DRP2A_ARATH Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2

 Score =  106 bits (265), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/121 (43%), Positives = 76/121 (62%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           LP DRH    NV++VV EADGYQP+LI+PE+G R LI   L   + PA   VD VH VL 
Sbjct: 378 LPLDRHFDLNNVKRVVLEADGYQPYLISPEKGLRSLIKIVLELAKDPARLCVDEVHRVLV 437

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           ++V  S   T  L R+P  + E+ A A+ AL+ F++++KK  + LV+ME +++    F +
Sbjct: 438 DIVSASANATPGLGRYPPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIR 497

Query: 170 L 170
           L
Sbjct: 498 L 498

Microtubule-associated force-producing protein involved in clathrin-mediated vesicle trafficking from the trans-Golgi network to the central vacuole. Able to bind and hydrolyze GTP. Binds specifically to phosphatidylinositol 3-phosphate (PtdIns3P).

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
225427288	613	PREDICTED: dynamin-related protein 1E is	0.825	0.384	0.886	1e-121
359474578	596	PREDICTED: dynamin-related protein 1E is	0.825	0.395	0.886	1e-121
255575768	614	dynamin, putative [Ricinus communis] gi|	0.825	0.384	0.839	1e-116
224138016	619	predicted protein [Populus trichocarpa]	0.818	0.378	0.863	1e-116
225453246	619	PREDICTED: dynamin-related protein 1E is	0.828	0.382	0.829	1e-116
359489239	602	PREDICTED: dynamin-related protein 1E is	0.828	0.393	0.829	1e-116
359474576	607	PREDICTED: dynamin-related protein 1E [V	0.804	0.378	0.860	1e-116
147803428	631	hypothetical protein VITISV_030342 [Viti	0.828	0.375	0.825	1e-115
224067411	614	predicted protein [Populus trichocarpa]	0.825	0.384	0.835	1e-114
356520720	618	PREDICTED: dynamin-related protein 1E-li	0.828	0.383	0.811	1e-111

>gi|225427288|ref|XP_002281722.1| PREDICTED: dynamin-related protein 1E isoform 1 [Vitis vinifera] gi|297742146|emb|CBI33933.3| unnamed protein product [Vitis vinifera]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 210/237 (88%), Positives = 229/237 (96%), Gaps = 1/237 (0%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           LPFDRHLS QNVRKV+SEADGYQPHLIAPEQGYRRLIDS+LNYFRGPAEASVDAVHFVLK
Sbjct: 378 LPFDRHLSLQNVRKVISEADGYQPHLIAPEQGYRRLIDSSLNYFRGPAEASVDAVHFVLK 437

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           ELVRRSIGET+EL+RFPTLQ+E+AAA+NEALERFR++SKKTT+RLVEMESSYLTVDFFRK
Sbjct: 438 ELVRRSIGETKELRRFPTLQAELAAASNEALERFREESKKTTLRLVEMESSYLTVDFFRK 497

Query: 170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
           LPQ++E+ GNP+A SAADRY EGHFRRIGSNVS YV MVSETLKN+IPKAVVHCQV+EAK
Sbjct: 498 LPQEVEKGGNPSA-SAADRYGEGHFRRIGSNVSQYVAMVSETLKNSIPKAVVHCQVREAK 556

Query: 230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
           RSLLDHFY Q+GKKEGKQL+QLLDEDP LMERRQQCAKRLELYKSARDEIDSVSW+R
Sbjct: 557 RSLLDHFYTQVGKKEGKQLSQLLDEDPALMERRQQCAKRLELYKSARDEIDSVSWSR 613

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474578|ref|XP_002281736.2| PREDICTED: dynamin-related protein 1E isoform 2 [Vitis vinifera]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 210/237 (88%), Positives = 229/237 (96%), Gaps = 1/237 (0%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           LPFDRHLS QNVRKV+SEADGYQPHLIAPEQGYRRLIDS+LNYFRGPAEASVDAVHFVLK
Sbjct: 361 LPFDRHLSLQNVRKVISEADGYQPHLIAPEQGYRRLIDSSLNYFRGPAEASVDAVHFVLK 420

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           ELVRRSIGET+EL+RFPTLQ+E+AAA+NEALERFR++SKKTT+RLVEMESSYLTVDFFRK
Sbjct: 421 ELVRRSIGETKELRRFPTLQAELAAASNEALERFREESKKTTLRLVEMESSYLTVDFFRK 480

Query: 170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
           LPQ++E+ GNP+A SAADRY EGHFRRIGSNVS YV MVSETLKN+IPKAVVHCQV+EAK
Sbjct: 481 LPQEVEKGGNPSA-SAADRYGEGHFRRIGSNVSQYVAMVSETLKNSIPKAVVHCQVREAK 539

Query: 230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
           RSLLDHFY Q+GKKEGKQL+QLLDEDP LMERRQQCAKRLELYKSARDEIDSVSW+R
Sbjct: 540 RSLLDHFYTQVGKKEGKQLSQLLDEDPALMERRQQCAKRLELYKSARDEIDSVSWSR 596

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575768|ref|XP_002528783.1| dynamin, putative [Ricinus communis] gi|223531786|gb|EEF33605.1| dynamin, putative [Ricinus communis]

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/237 (83%), Positives = 223/237 (94%), Gaps = 1/237 (0%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           LPFDRHLSPQN+RKVVSEADGYQPHLIAPEQGYRRLID A++YF+ PAE SVDAVHF+LK
Sbjct: 379 LPFDRHLSPQNIRKVVSEADGYQPHLIAPEQGYRRLIDGAISYFKAPAENSVDAVHFILK 438

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           ELVRRS+GETQELKRFPTLQ+EIA AA++ALERFR+DS+KTT+RLV+MESSYLTVDFFRK
Sbjct: 439 ELVRRSVGETQELKRFPTLQAEIAIAASDALERFREDSRKTTLRLVDMESSYLTVDFFRK 498

Query: 170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
           +P ++E+VGNP A + ADRYTEGHFRRIGSNVSSYVGMVSE L+ +IPKAVVHCQV+EAK
Sbjct: 499 IPMEMEKVGNPIA-NNADRYTEGHFRRIGSNVSSYVGMVSEALRISIPKAVVHCQVREAK 557

Query: 230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
           RSLLDHFY Q+G+KE KQLAQLLDEDP LMERRQ+CAKRLELYKSARDEIDSVSW R
Sbjct: 558 RSLLDHFYTQIGRKEAKQLAQLLDEDPALMERRQECAKRLELYKSARDEIDSVSWAR 614

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138016|ref|XP_002326497.1| predicted protein [Populus trichocarpa] gi|222833819|gb|EEE72296.1| predicted protein [Populus trichocarpa]

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/235 (86%), Positives = 220/235 (93%), Gaps = 1/235 (0%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           LPFDRHLS QNVRKVVSEADGYQPHLIAPEQGYRRLID ALNYFRGPAEASVDAVHF+LK
Sbjct: 384 LPFDRHLSLQNVRKVVSEADGYQPHLIAPEQGYRRLIDGALNYFRGPAEASVDAVHFILK 443

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           E+VRRSIGETQELKRFPTLQ+EIA+AA +ALERFR+DSKKTT+RLVEMESSYLTVDFFRK
Sbjct: 444 EIVRRSIGETQELKRFPTLQAEIASAAYDALERFREDSKKTTLRLVEMESSYLTVDFFRK 503

Query: 170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
           LP + E+ G+PT  S  DRY EGHFRRIGSNVSSY GMVS+TL+N+IPKAVVHCQVKEAK
Sbjct: 504 LPLEAEKGGDPTV-SNVDRYAEGHFRRIGSNVSSYAGMVSQTLRNSIPKAVVHCQVKEAK 562

Query: 230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSW 284
           RSLLDHFY Q+GKKEGKQLA LLDEDP LMERRQ+CA+RLELYK+ARDEIDSVSW
Sbjct: 563 RSLLDHFYTQVGKKEGKQLAALLDEDPALMERRQKCARRLELYKNARDEIDSVSW 617

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453246|ref|XP_002265511.1| PREDICTED: dynamin-related protein 1E isoform 1 [Vitis vinifera] gi|297734680|emb|CBI16731.3| unnamed protein product [Vitis vinifera]

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 200/241 (82%), Positives = 222/241 (92%), Gaps = 4/241 (1%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           LPFDRHLS QNVRK+VSEADGYQPHLIAPEQGYRRLI+ +LNYFRGPAEASVDAVHFVLK
Sbjct: 379 LPFDRHLSLQNVRKIVSEADGYQPHLIAPEQGYRRLIEGSLNYFRGPAEASVDAVHFVLK 438

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           ELVR+SIGETQELKRFPTLQ+EI+AA  E+LERFRDDSKKT +RLVEME+SYLTV+FFRK
Sbjct: 439 ELVRKSIGETQELKRFPTLQAEISAATGESLERFRDDSKKTVIRLVEMEASYLTVEFFRK 498

Query: 170 LPQDIERVGNPT----APSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQV 225
           LPQ++E+VGNP     A S  DRYTEGHFRRI SNVSSYV MVS+TL+NTIPKAVVHCQV
Sbjct: 499 LPQEVEKVGNPAGGNPAASTVDRYTEGHFRRIASNVSSYVNMVSDTLRNTIPKAVVHCQV 558

Query: 226 KEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWT 285
           +EAK+SLL+ FY Q+GKKEGKQL+Q+LDEDP LMERRQQCAKRLELYK+ARDEIDSVSW 
Sbjct: 559 REAKQSLLNLFYTQIGKKEGKQLSQMLDEDPALMERRQQCAKRLELYKAARDEIDSVSWV 618

Query: 286 R 286
           R
Sbjct: 619 R 619

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489239|ref|XP_002265553.2| PREDICTED: dynamin-related protein 1E isoform 2 [Vitis vinifera]

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 200/241 (82%), Positives = 222/241 (92%), Gaps = 4/241 (1%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           LPFDRHLS QNVRK+VSEADGYQPHLIAPEQGYRRLI+ +LNYFRGPAEASVDAVHFVLK
Sbjct: 362 LPFDRHLSLQNVRKIVSEADGYQPHLIAPEQGYRRLIEGSLNYFRGPAEASVDAVHFVLK 421

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           ELVR+SIGETQELKRFPTLQ+EI+AA  E+LERFRDDSKKT +RLVEME+SYLTV+FFRK
Sbjct: 422 ELVRKSIGETQELKRFPTLQAEISAATGESLERFRDDSKKTVIRLVEMEASYLTVEFFRK 481

Query: 170 LPQDIERVGNPT----APSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQV 225
           LPQ++E+VGNP     A S  DRYTEGHFRRI SNVSSYV MVS+TL+NTIPKAVVHCQV
Sbjct: 482 LPQEVEKVGNPAGGNPAASTVDRYTEGHFRRIASNVSSYVNMVSDTLRNTIPKAVVHCQV 541

Query: 226 KEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWT 285
           +EAK+SLL+ FY Q+GKKEGKQL+Q+LDEDP LMERRQQCAKRLELYK+ARDEIDSVSW 
Sbjct: 542 REAKQSLLNLFYTQIGKKEGKQLSQMLDEDPALMERRQQCAKRLELYKAARDEIDSVSWV 601

Query: 286 R 286
           R
Sbjct: 602 R 602

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474576|ref|XP_003631492.1| PREDICTED: dynamin-related protein 1E [Vitis vinifera]

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/237 (86%), Positives = 223/237 (94%), Gaps = 7/237 (2%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           LPFDRHLS QNVRKV+SEADGYQPHLIAPEQGYRRLIDS+LNYFRGPAEASVDA      
Sbjct: 378 LPFDRHLSLQNVRKVISEADGYQPHLIAPEQGYRRLIDSSLNYFRGPAEASVDA------ 431

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           ELVRRSIGET+EL+RFPTLQ+E+AAA+NEALERFR++SKKTT+RLVEMESSYLTVDFFRK
Sbjct: 432 ELVRRSIGETKELRRFPTLQAELAAASNEALERFREESKKTTLRLVEMESSYLTVDFFRK 491

Query: 170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
           LPQ++E+ GNP+A SAADRY EGHFRRIGSNVS YV MVSETLKN+IPKAVVHCQV+EAK
Sbjct: 492 LPQEVEKGGNPSA-SAADRYGEGHFRRIGSNVSQYVAMVSETLKNSIPKAVVHCQVREAK 550

Query: 230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
           RSLLDHFY Q+GKKEGKQL+QLLDEDP LMERRQQCAKRLELYKSARDEIDSVSW+R
Sbjct: 551 RSLLDHFYTQVGKKEGKQLSQLLDEDPALMERRQQCAKRLELYKSARDEIDSVSWSR 607

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147803428|emb|CAN71045.1| hypothetical protein VITISV_030342 [Vitis vinifera]

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 199/241 (82%), Positives = 221/241 (91%), Gaps = 4/241 (1%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           LPFDRHLS QNVRK+VSEADGYQPHLIAPEQGYRRLI+ +LNYFRGPAEASVDAVHFVLK
Sbjct: 391 LPFDRHLSLQNVRKIVSEADGYQPHLIAPEQGYRRLIEGSLNYFRGPAEASVDAVHFVLK 450

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           ELVR+SIGETQELKRFPTLQ+EI+AA  E+LERFRDDSKKT +RLVEME+SYLTV+FFRK
Sbjct: 451 ELVRKSIGETQELKRFPTLQAEISAATGESLERFRDDSKKTVIRLVEMEASYLTVEFFRK 510

Query: 170 LPQDIERVGNPT----APSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQV 225
           LPQ++E+VGNP     A S  DRYTEGHFRRI SNVSSYV MVS+TL+NTIPKAVVHCQV
Sbjct: 511 LPQEVEKVGNPAGGNPAASTVDRYTEGHFRRIASNVSSYVNMVSDTLRNTIPKAVVHCQV 570

Query: 226 KEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWT 285
           +EAK+SLL+ FY Q+GKKEGKQL+Q+LDEDP LMERRQQC KRLELYK+ARDEIDSVSW 
Sbjct: 571 REAKQSLLNLFYTQIGKKEGKQLSQMLDEDPALMERRQQCXKRLELYKAARDEIDSVSWV 630

Query: 286 R 286
           R
Sbjct: 631 R 631

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067411|ref|XP_002302482.1| predicted protein [Populus trichocarpa] gi|222844208|gb|EEE81755.1| predicted protein [Populus trichocarpa]

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 198/237 (83%), Positives = 221/237 (93%), Gaps = 1/237 (0%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           LPFDRHLS QNV++VVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK
Sbjct: 379 LPFDRHLSLQNVKRVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 438

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           ELVR+SI ETQEL+RFP+LQ+E+A AAN+ALERFR+ SKKT +RLV+MESSYLTVDFFR+
Sbjct: 439 ELVRKSIAETQELRRFPSLQAELAGAANQALERFREGSKKTAIRLVDMESSYLTVDFFRR 498

Query: 170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
           LPQ+++  GNP A S  DRYTE HFRRIGSNVSSYVGMVSETLK++IPKAVVHCQV+EAK
Sbjct: 499 LPQEVDNGGNP-ASSTVDRYTEMHFRRIGSNVSSYVGMVSETLKSSIPKAVVHCQVREAK 557

Query: 230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
            SLL+HFY Q+GKKEGKQL+QLLDEDP LMERRQQCAKRLELYK+ARDE+DSVSW R
Sbjct: 558 HSLLNHFYTQIGKKEGKQLSQLLDEDPALMERRQQCAKRLELYKAARDEVDSVSWAR 614

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520720|ref|XP_003529008.1| PREDICTED: dynamin-related protein 1E-like isoform 1 [Glycine max]

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 194/239 (81%), Positives = 219/239 (91%), Gaps = 2/239 (0%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           LPFDRHLS QNVRKVVSEADGYQPHLIAPEQGYRRLI+ AL YFRGPAEASVDAVHFVLK
Sbjct: 380 LPFDRHLSLQNVRKVVSEADGYQPHLIAPEQGYRRLIEGALGYFRGPAEASVDAVHFVLK 439

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
           ELVR+SI ETQEL+RFPTLQ+EIAA  NEALERFR++SKKT +RLV+ME+SYLTV+FFRK
Sbjct: 440 ELVRKSIAETQELRRFPTLQAEIAAGTNEALERFREESKKTVIRLVDMEASYLTVEFFRK 499

Query: 170 LPQDIERVGNP-TAPSA-ADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKE 227
           LPQ++E+ GNP   P+   DRY EGH+RRIGSNVSSY+GMVS+TL+NTIPKAVV+CQV+E
Sbjct: 500 LPQEMEKAGNPANQPTPNVDRYGEGHYRRIGSNVSSYIGMVSDTLRNTIPKAVVYCQVRE 559

Query: 228 AKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
           AK SLL+HFY Q+GKKE KQL+QLLDE+P LMERRQQCAKRLELYK+ARDEIDSVSW R
Sbjct: 560 AKLSLLNHFYTQIGKKEAKQLSQLLDENPALMERRQQCAKRLELYKAARDEIDSVSWAR 618

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
TAIR|locus:2101482	624	DL1E "DYNAMIN-like 1E" [Arabid	0.828	0.379	0.725	1.3e-91
TAIR|locus:2006777	614	DL1C "DYNAMIN-like 1C" [Arabid	0.860	0.400	0.7	2.8e-89
TAIR|locus:2042371	612	DL1D "DYNAMIN-like 1D" [Arabid	0.867	0.405	0.646	1.4e-85
TAIR|locus:2076780	610	DL1B "DYNAMIN-like 1B" [Arabid	0.902	0.422	0.584	3.8e-78
TAIR|locus:2165805	610	DL1 "dynamin-like protein" [Ar	0.825	0.386	0.616	3.4e-77
UNIPROTKB|Q39821	610	Q39821 "Dynamin-related protei	0.825	0.386	0.603	7.1e-77
TAIR|locus:2012763	914	ADL6 "dynamin-like protein 6"	0.430	0.134	0.439	3e-31
TAIR|locus:2202847	920	DL3 "dynamin-like 3" [Arabidop	0.430	0.133	0.430	6.3e-31
UNIPROTKB|G4N7U4	802	MGG_06361 "Dynamin-A" [Magnapo	0.356	0.127	0.295	2.3e-10
DICTYBASE|DDB_G0277849	853	dymA "dynamin like protein" [D	0.272	0.091	0.275	1.2e-09

TAIR|locus:2101482 DL1E "DYNAMIN-like 1E" [Arabidopsis thaliana (taxid:3702)]

 Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
 Identities = 177/244 (72%), Positives = 215/244 (88%)

Query:    50 LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
             LPFDRHLS Q+V+K+VSEADGYQPHLIAPEQGYRRLI+ AL YFRGPAEASVDAVH+VLK
Sbjct:   381 LPFDRHLSLQSVKKIVSEADGYQPHLIAPEQGYRRLIEGALGYFRGPAEASVDAVHYVLK 440

Query:   110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
             ELVR+SI ET+ELKRFP+LQ E+AAAAN +LE+FR++SKK+ +RLV+MES+YLT +FFRK
Sbjct:   441 ELVRKSISETEELKRFPSLQVELAAAANSSLEKFREESKKSVIRLVDMESAYLTAEFFRK 500

Query:   170 LPQDIERV----GNPTA-PSAA--DRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVH 222
             LPQ+IER      N TA PS+A  D+Y +GHFRRI SNVS+YV MVS+TL+NTIPKA V+
Sbjct:   501 LPQEIERPVTNSKNQTASPSSATLDQYGDGHFRRIASNVSAYVNMVSDTLRNTIPKACVY 560

Query:   223 CQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSV 282
             CQV++AK +LL++FY+Q+ K+EGKQL QLLDEDP LM+RR +CAKRLELYK ARDEID+V
Sbjct:   561 CQVRQAKLALLNYFYSQISKREGKQLGQLLDEDPALMDRRLECAKRLELYKKARDEIDAV 620

Query:   283 SWTR 286
             +W R
Sbjct:   621 AWVR 624

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0016192 "vesicle-mediated transport" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

TAIR|locus:2006777 DL1C "DYNAMIN-like 1C" [Arabidopsis thaliana (taxid:3702)]

 Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
 Identities = 175/250 (70%), Positives = 215/250 (86%)

Query:    39 LIDHGLFEVIM-LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPA 97
             + DH L   +  LPFDRHLS +NV+KVVSEADGYQPHLIAPEQGYRRLID +++YF+GPA
Sbjct:   364 VFDHQLPAALKKLPFDRHLSTKNVQKVVSEADGYQPHLIAPEQGYRRLIDGSISYFKGPA 423

Query:    98 EASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEM 157
             EA+VDAVHFVLKELVR+SI ET+ELKRFPTL S+IAAAANEALERFRD+S+KT +RLV+M
Sbjct:   424 EATVDAVHFVLKELVRKSISETEELKRFPTLASDIAAAANEALERFRDESRKTVLRLVDM 483

Query:   158 ESSYLTVDFFRKLPQDIERVG-NP-TAPSA-ADRYTEGHFRRIGSNVSSYVGMVSETLKN 214
             ESSYLTV+FFRKL  + E+   NP  AP+  AD Y++ HFR+IGSNVS+Y+ MV +TL+N
Sbjct:   484 ESSYLTVEFFRKLHLEPEKEKPNPRNAPAPNADPYSDNHFRKIGSNVSAYINMVCDTLRN 543

Query:   215 TIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKS 274
             ++PKAVV+CQV+EAKRSLL+ FYAQ+G+KE ++L  +LDEDP LMERR   AKRLELYK 
Sbjct:   544 SLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAMLDEDPQLMERRGTLAKRLELYKQ 603

Query:   275 ARDEIDSVSW 284
             ARD+ID+V+W
Sbjct:   604 ARDDIDAVAW 613

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0009504 "cell plate" evidence=IDA

GO:0010152 "pollen maturation" evidence=IMP

GO:0000266 "mitochondrial fission" evidence=IMP

GO:0007005 "mitochondrion organization" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005938 "cell cortex" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0042732 "D-xylose metabolic process" evidence=RCA

TAIR|locus:2042371 DL1D "DYNAMIN-like 1D" [Arabidopsis thaliana (taxid:3702)]

 Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
 Identities = 161/249 (64%), Positives = 208/249 (83%)

Query:    39 LIDHGLFEVIM-LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPA 97
             + D+ L   I  LPFDRHLS Q+V+++VSE+DGYQPHLIAPE GYRRLI+ +LN+FRGPA
Sbjct:   364 IFDYNLPTAIKKLPFDRHLSLQSVKRIVSESDGYQPHLIAPELGYRRLIEGSLNHFRGPA 423

Query:    98 EASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEM 157
             EASV+A+H +LKELVR++I ET+ELKRFP+LQ E+ AAAN +L++FR++S K+ +RLV+M
Sbjct:   424 EASVNAIHLILKELVRKAIAETEELKRFPSLQIELVAAANSSLDKFREESMKSVLRLVDM 483

Query:   158 ESSYLTVDFFRKLPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIP 217
             ESSYLTVDFFRKL  + + +   +  SA D+Y +GHFR+I SNV++Y+ MV+ETL NTIP
Sbjct:   484 ESSYLTVDFFRKLHVESQNMSLSSPTSAIDQYGDGHFRKIASNVAAYIKMVAETLVNTIP 543

Query:   218 KAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARD 277
             KAVVHCQV++AK SLL++FYAQ+ + +GK+L QLLDE+P LMERR QCAKRLELYK ARD
Sbjct:   544 KAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQLLDENPALMERRMQCAKRLELYKKARD 603

Query:   278 EIDSVSWTR 286
             EID+  W R
Sbjct:   604 EIDAAVWVR 612

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

TAIR|locus:2076780 DL1B "DYNAMIN-like 1B" [Arabidopsis thaliana (taxid:3702)]

 Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
 Identities = 152/260 (58%), Positives = 205/260 (78%)

Query:    28 GDWDGHQKRSLLIDHGLFEVIM-LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLI 86
             G   G +K + + D+     I  L FD+HLS  NVRK+++EADGYQPHLIAPEQGYRRLI
Sbjct:   352 GTRSGGEKINSVFDNQFPAAIKRLQFDKHLSMDNVRKLITEADGYQPHLIAPEQGYRRLI 411

Query:    87 DSALNYFRGPAEASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDD 146
             +S L   RGPAEA+VDAVH +LK+L+ +S+GET ELK++PTL+ E++ AA ++L+R RD+
Sbjct:   412 ESCLVSIRGPAEAAVDAVHSILKDLIHKSMGETSELKQYPTLRVEVSGAAVDSLDRMRDE 471

Query:   147 SKKTTMRLVEMESSYLTVDFFRKLPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVG 206
             S+K T+ LV+MES YLTV+FFRKLPQD E+ GNPT  S  DRY + + RRIGSNV SYV 
Sbjct:   472 SRKATLLLVDMESGYLTVEFFRKLPQDSEKGGNPTH-SIFDRYNDAYLRRIGSNVLSYVN 530

Query:   207 MVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCA 266
             MV   L+N+IPK++V+CQV+EAKRSLLD F+ +LG+KE  +L++LLDEDP + +RR   A
Sbjct:   531 MVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLDEDPAVQQRRTSIA 590

Query:   267 KRLELYKSARDEIDSVSWTR 286
             KRLELY+SA+ +I++V+W++
Sbjct:   591 KRLELYRSAQTDIEAVAWSK 610

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

TAIR|locus:2165805 DL1 "dynamin-like protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
 Identities = 146/237 (61%), Positives = 194/237 (81%)

Query:    50 LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
             L FD+ L+  N+RK+V+EADGYQPHLIAPEQGYRRLI+S++   RGPAEASVD VH +LK
Sbjct:   375 LQFDKQLAMDNIRKLVTEADGYQPHLIAPEQGYRRLIESSIVSIRGPAEASVDTVHAILK 434

Query:   110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
             +LV +S+ ET ELK++P L+ E+  AA E+L++ R+ SKK T++LV+ME SYLTVDFFRK
Sbjct:   435 DLVHKSVNETVELKQYPALRVEVTNAAIESLDKMREGSKKATLQLVDMECSYLTVDFFRK 494

Query:   170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
             LPQD+E+ GNPT  S  DRY + + RRIGSNV SYV MV   L+N+IPK++V+CQV+EAK
Sbjct:   495 LPQDVEKGGNPTH-SIFDRYNDSYLRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAK 553

Query:   230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
             RSLLDHF+A+LG  + K+L+ LL+EDP +MERR   +KRLELY++A+ EID+V+W++
Sbjct:   554 RSLLDHFFAELGTMDMKRLSSLLNEDPAIMERRSAISKRLELYRAAQSEIDAVAWSK 610

GO:0003924 "GTPase activity" evidence=IEA;IDA

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0000911 "cytokinesis by cell plate formation" evidence=IGI

GO:0009504 "cell plate" evidence=IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=IGI

GO:0009920 "cell plate formation involved in plant-type cell wall biogenesis" evidence=IGI

GO:0010091 "trichome branching" evidence=IMP

GO:0005773 "vacuole" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005874 "microtubule" evidence=IDA

GO:0010051 "xylem and phloem pattern formation" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0043424 "protein histidine kinase binding" evidence=IPI

GO:0030276 "clathrin binding" evidence=IDA

GO:0072583 "clathrin-mediated endocytosis" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0032880 "regulation of protein localization" evidence=RCA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

UNIPROTKB|Q39821 Q39821 "Dynamin-related protein 12A" [Glycine max (taxid:3847)]

 Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
 Identities = 143/237 (60%), Positives = 197/237 (83%)

Query:    50 LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
             L FD+ LS +N+RK+++EADGYQPHLIAPEQGYRRLI+S+L   RGPAE++VDAVH +LK
Sbjct:   375 LQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESSLITIRGPAESAVDAVHSLLK 434

Query:   110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
             +LV +++ ET +LK++P L+ E+ AA+ ++LER RD+SK+ T++LV+ME  YLTVDFFRK
Sbjct:   435 DLVHKAMSETLDLKQYPGLRVEVGAASVDSLERMRDESKRATLQLVDMECGYLTVDFFRK 494

Query:   170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
             LPQD+++ GNPT  S  DRY + + RRIG+ + SYV MV  TL+++IPK++V+CQV+EAK
Sbjct:   495 LPQDVDKGGNPTH-SICDRYNDSYLRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAK 553

Query:   230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
             RSLLDHF+ +LGK E K+L+ LL+EDP +MERR   AKRLELY+SA+ EID+V+W++
Sbjct:   554 RSLLDHFFTELGKMEIKRLSSLLNEDPAIMERRSALAKRLELYRSAQAEIDAVAWSK 610

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2012763 ADL6 "dynamin-like protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
 Identities = 54/123 (43%), Positives = 77/123 (62%)

Query:    50 LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
             LP DRH    NV++VV EADGYQP+LI+PE+G R LI   L   + PA   VD VH VL 
Sbjct:   378 LPLDRHFDLNNVKRVVLEADGYQPYLISPEKGLRSLIKIVLELAKDPARLCVDEVHRVLV 437

Query:   110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
             ++V  S   T  L R+P  + E+ A A+ AL+ F++++KK  + LV+ME +++    F +
Sbjct:   438 DIVSASANATPGLGRYPPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIR 497

Query:   170 LPQ 172
             L Q
Sbjct:   498 LVQ 500

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006896 "Golgi to vacuole transport" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2202847 DL3 "dynamin-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 6.3e-31, Sum P(2) = 6.3e-31
 Identities = 53/123 (43%), Positives = 78/123 (63%)

Query:    50 LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
             LP DRH    NV+++V EADGYQP+LI+PE+G R LI + L   + PA   VD VH VL 
Sbjct:   378 LPLDRHFDLNNVKRIVLEADGYQPYLISPEKGLRSLIKTVLELAKDPARLCVDEVHRVLV 437

Query:   110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
             ++V  S   T  L R+P  + E+ A A+ AL+ F++++KK  + LV+ME +++    F +
Sbjct:   438 DIVSASANATPGLGRYPPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIR 497

Query:   170 LPQ 172
             L Q
Sbjct:   498 LVQ 500

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009504 "cell plate" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030276 "clathrin binding" evidence=IDA

GO:0045334 "clathrin-coated endocytic vesicle" evidence=IDA

GO:0072583 "clathrin-mediated endocytosis" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

UNIPROTKB|G4N7U4 MGG_06361 "Dynamin-A" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 122 (48.0 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
 Identities = 31/105 (29%), Positives = 55/105 (52%)

Query:   178 GNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFY 237
             G+   P+  DR        I + +SSY  +V E++ +T+PKA++H  V   K  + +   
Sbjct:   700 GHSGEPALTDREAM-ETELIRALISSYFNIVRESIADTVPKAIMHLLVNHCKDVVQNRLV 758

Query:   238 AQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSV 282
             ++L K+      +LL ED  +++ R++C K L+ Y+ A   I  V
Sbjct:   759 SELYKEA--LFEELLYEDDGVVKEREKCEKLLQTYREAAKIISEV 801

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0277849 dymA "dynamin like protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 119 (46.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
 Identities = 22/80 (27%), Positives = 47/80 (58%)

Query:   203 SYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERR 262
             SY  +V + +K+++PK+++H  V ++K  + +   A L K+E     +LL+E P +  +R
Sbjct:   771 SYFNIVKKNVKDSVPKSIMHFLVNQSKEHIQNELVAALYKEE--LFDELLEESPQISSKR 828

Query:   263 QQCAKRLELYKSARDEIDSV 282
             + C   +E+ + A + I+ +
Sbjct:   829 KSCKAMIEILRKANEIINEI 848

GO:0097204 "phagocytic cup base" evidence=IDA

GO:0045335 "phagocytic vesicle" evidence=IDA

GO:0005522 "profilin binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

GO:0042802 "identical protein binding" evidence=IDA

GO:0006184 "GTP catabolic process" evidence=IEA;IDA

GO:0005543 "phospholipid binding" evidence=IDA

GO:0005525 "GTP binding" evidence=IEA;IDA

GO:0003924 "GTPase activity" evidence=IEA;IDA

GO:0032195 "post-lysosomal vacuole" evidence=IDA

GO:0031288 "sorocarp morphogenesis" evidence=IMP

GO:0007163 "establishment or maintenance of cell polarity" evidence=IMP

GO:0007032 "endosome organization" evidence=IMP

GO:0007005 "mitochondrion organization" evidence=IMP

GO:0006997 "nucleus organization" evidence=IMP

GO:0006909 "phagocytosis" evidence=IMP

GO:0006907 "pinocytosis" evidence=IMP

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0000920 "cytokinetic cell separation" evidence=IMP

GO:0016787 "hydrolase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0048312 "intracellular distribution of mitochondria" evidence=IMP

GO:1900756 "protein processing in phagocytic vesicle" evidence=IMP

GO:0090383 "phagosome acidification" evidence=IMP

GO:0044656 "regulation of post-lysosomal vacuole size" evidence=IMP

GO:0044351 "macropinocytosis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FNX5	DRP1E_ARATH	No assigned EC number	0.7254	0.8286	0.3798	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	286
smart00302	92	smart00302, GED, Dynamin GTPase effector domain	1e-28
pfam02212	90	pfam02212, GED, Dynamin GTPase effector domain	2e-27
pfam01031	296	pfam01031, Dynamin_M, Dynamin central region	2e-23

>gnl|CDD|128597 smart00302, GED, Dynamin GTPase effector domain

 Score =  104 bits (262), Expect = 1e-28
 Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 2/94 (2%)

Query: 189 YTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQL 248
           Y +     I S V SY  +VS+TL + +PKA+++  V E+K SL +   A L K+E   L
Sbjct: 1   YEDSELEEIKSLVKSYFTIVSKTLADQVPKAIMYLLVNESKDSLQNELLALLYKEEL--L 58

Query: 249 AQLLDEDPMLMERRQQCAKRLELYKSARDEIDSV 282
            +LL+EDP +  +R++  KRLEL K AR  I +V
Sbjct: 59  DELLEEDPEIASKRKELKKRLELLKKARQIIAAV 92

Length = 92

>gnl|CDD|202159 pfam02212, GED, Dynamin GTPase effector domain

 Score =  101 bits (254), Expect = 2e-27
 Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 2/92 (2%)

Query: 191 EGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQ 250
           E     I   + SY  +V + + + IPKA+++  V E+K SL       L KKE   L +
Sbjct: 1   ELEVEEIRRLLKSYFNIVRKRIADQIPKAIMYFLVNESKESLQKELLQLLYKKE--DLDE 58

Query: 251 LLDEDPMLMERRQQCAKRLELYKSARDEIDSV 282
           LL EDP + ++R++  KRLE  K AR+ +  V
Sbjct: 59  LLKEDPEIAQKRKELKKRLERLKKAREILAEV 90

Length = 90

>gnl|CDD|216255 pfam01031, Dynamin_M, Dynamin central region

 Score = 96.8 bits (242), Expect = 2e-23
 Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 5/137 (3%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           +     LS + +R  +    G +  L  PE+ +  L+   +     PA   VD V+  L+
Sbjct: 162 IDPFEKLSDEEIRTAIRNYRGRRLPLFVPEKAFELLVKKQIKRLEEPALKCVDLVYEELR 221

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTV---DF 166
            +  +    ++EL RFP L+  I     + L    + ++K    L++ME +Y+     DF
Sbjct: 222 RIFLKIA--SKELSRFPNLKEAIKEVVEDILREQLEPTEKMVRDLIDMELAYINTNHPDF 279

Query: 167 FRKLPQDIERVGNPTAP 183
              L    ++       
Sbjct: 280 IGGLQAVKKKEEEEEKK 296

This region lies between the GTPase domain, see pfam00350, and the pleckstrin homology (PH) domain, see pfam00169. Length = 296

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	286
KOG0446	657	consensus Vacuolar sorting protein VPS1, dynamin,	100.0
PF01031	295	Dynamin_M: Dynamin central region; InterPro: IPR00	100.0
smart00302	92	GED Dynamin GTPase effector domain.	99.95
PF02212	92	GED: Dynamin GTPase effector domain; InterPro: IPR	99.91
COG0699	546	Predicted GTPases (dynamin-related) [General funct	97.77

>KOG0446 consensus Vacuolar sorting protein VPS1, dynamin, and related proteins [Intracellular trafficking, secretion, and vesicular transport; General function prediction only]

Probab=100.00  E-value=5.1e-46  Score=371.00  Aligned_cols=276  Identities=30%  Similarity=0.390  Sum_probs=239.6

Q ss_pred             HHHHHhhhhhhcCcccccccCccccchhHHHHhHHhhhhhh-ccCcCCCCCHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 042048            8 MKTLMDFPHLGGGLIVSLEVGDWDGHQKRSLLIDHGLFEVI-MLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLI   86 (286)
Q Consensus         8 ~~~l~~~~~~~~g~~~~~~~~el~gGaRI~~if~~~f~~~i-~~~~~~~l~~~dI~~~i~n~~G~~~plFvp~~aFe~Lv   86 (286)
                      ..|-.+|++.+.|..+...+.+++|||||+|+|++.|+..+ .+++.+.++..+|+++++|++|+++++|+|+.+||.+|
T Consensus       334 ~~~~~~~~~~v~g~~~~~~~~elsggari~~~F~~~f~~~i~~i~~~~~~~~~~i~~~i~~~~G~~~~lf~p~~afe~lv  413 (657)
T KOG0446|consen  334 REDPRGLRTGVIGKLDLVPTKALSGGARINYPFHGGFPGVIKKLPPDRKLLGQNIEKLVSEASGIRPSLFVPESSFESLV  413 (657)
T ss_pred             HHHHHHHHHhhcccccccchhcccchhhhhhhhhhccchhhhcCCcchhhhHHHHHHHHHhccCCCccccCChHHHHHHH
Confidence            45666788888888876557789999999999999999999 89888899999999999999999999999999999999


Q ss_pred             HHHHhhccccHHHHHHHHHHHHHHHHHHHhcccccCCCchhHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhhhhcCCH--
Q 042048           87 DSALNYFRGPAEASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTV--  164 (286)
Q Consensus        87 k~qI~~l~~Ps~~cv~~V~~~l~~iv~~~~~~~~~f~rFp~L~~~v~~~i~~~l~~~~~~a~~~i~~li~~E~~yint--  164 (286)
                      ++||+.+++||++||+.|++++.++++.+..+ .+|.|||.|+..+.+++.++++++.++++++|.++|+||.+|+||  
T Consensus       414 k~~i~~l~~p~l~~v~~v~~el~~~~~~~~~~-~~l~rfp~l~~~~~~~~~~~~~~~~~~t~~~v~~~i~~e~~yinT~h  492 (657)
T KOG0446|consen  414 KGQIQSLRDPSLKCVEEVHRELVRIVADSIRA-TELKRFPVLYSELVEIASSLIAEGLDETKKAVKNLIDLEQSYLNTDH  492 (657)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhh-HHHHHhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcC
Confidence            99999999999999999999999999999732 289999999999999999999999999999999999999999999  


Q ss_pred             -HhhccCchhh---hh--------------cCCCCCC-C----CC---------------------CCCChHHHHHHHHH
Q 042048          165 -DFFRKLPQDI---ER--------------VGNPTAP-S----AA---------------------DRYTEGHFRRIGSN  200 (286)
Q Consensus       165 -d~~~~~~~~~---~~--------------~~~~~~~-~----~~---------------------~~~~~~~~~~i~~~  200 (286)
                       ||++...+..   ..              .+...+. .    +.                     ......+.+.|+.+
T Consensus       493 ~df~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  572 (657)
T KOG0446|consen  493 PDFRSLTDSALSSVTSPSIAAMKLISAQLLKEELGECNSALKAIKNAVGSIRLDPSDIVLSRALVLKKRECKETEEISSC  572 (657)
T ss_pred             hhhhhhHHHHHHHhhcccccccccccccccccccccccchhhhhcchhhhhhhcccchhhhhhhhcchhhhHHHHHHHHH
Confidence             5665432111   11              0000000 0    00                     00011267899999


Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHhHhhhhCCChHHHHHHHHHHHHHHHHHHHHHHhh
Q 042048          201 VSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEID  280 (286)
Q Consensus       201 v~sYF~Iv~k~i~D~VPk~I~~~LV~~~~~~Lq~~L~~~L~~~~~~~~~~LL~Ed~~i~~kR~~l~~~l~~L~~A~~~L~  280 (286)
                      +.+||+||+++|+|+|||+|||+||+.++++||++|++.||.. .+.+++||+|+|.++.+|+.|++++++|++|++++.
T Consensus       573 ~~sY~~iv~~~i~d~vpk~i~~~lv~~~k~~l~~~l~~~L~~~-~~~~~~ll~E~~~i~~~R~~~~~~l~~L~~a~~ii~  651 (657)
T KOG0446|consen  573 PESYLNIVSDKLVDTVPKALNHELLNEFKDDLPNELDQRLYAG-DEQLESLLKEDPRIKRRRELQQKRLLALQKALSILA  651 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-hhHHHHHHccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999992 348999999999999999999999999999999999


Q ss_pred             hcccC
Q 042048          281 SVSWT  285 (286)
Q Consensus       281 ~i~~~  285 (286)
                      .+.|+
T Consensus       652 ~~~~~  656 (657)
T KOG0446|consen  652 TVAQA  656 (657)
T ss_pred             HHhcc
Confidence            99876

>PF01031 Dynamin_M: Dynamin central region; InterPro: IPR000375 Dynamin is a microtubule-associated force-producing protein of 100 Kd which is involved in the production of microtubule bundles

Probab=100.00  E-value=6.8e-33  Score=255.02  Aligned_cols=155  Identities=23%  Similarity=0.405  Sum_probs=130.8

Q ss_pred             hhhhhhcCccc-ccccCccccchhHHHHhHHhhhhhh-ccCcCCCCCHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 042048           13 DFPHLGGGLIV-SLEVGDWDGHQKRSLLIDHGLFEVI-MLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSAL   90 (286)
Q Consensus        13 ~~~~~~~g~~~-~~~~~el~gGaRI~~if~~~f~~~i-~~~~~~~l~~~dI~~~i~n~~G~~~plFvp~~aFe~Lvk~qI   90 (286)
                      .+..+++|... +..+.++.|||||+++|++.|...+ .+++.++++++||+++|+|++|+++|||+|+.||+.||++||
T Consensus       124 ~~~~~i~G~~~~~~~~~~l~~~ari~~~f~~~~~~~~~~~~~~~~~~~~eI~~~i~~~~G~elp~f~p~~afe~Li~~~i  203 (295)
T PF01031_consen  124 IFKDAIDGEYSDEFSTNELRGGARIRYIFNEWFDKFLEKIDPFEDLSDEEIRTAIRNSRGRELPGFVPESAFESLIRKQI  203 (295)
T ss_dssp             HHHHHHTT-------TTS--HHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHH--S-SSS-SCCHHHHHHHHHHHH
T ss_pred             HHHHHhcCCccccccccccchhhHHHHHHHhhhhhhhhhhccccchhHHHHHHHHHhhcccccccchhHHHHHHHHHHHH
Confidence            44556668876 4678889999999999999999999 887776899999999999999999999999999999999999


Q ss_pred             hhccccHHHHHHHHHHHHHHHHHHHhcccccCCCchhHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhhhhcCCH---Hhh
Q 042048           91 NYFRGPAEASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTV---DFF  167 (286)
Q Consensus        91 ~~l~~Ps~~cv~~V~~~l~~iv~~~~~~~~~f~rFp~L~~~v~~~i~~~l~~~~~~a~~~i~~li~~E~~yint---d~~  167 (286)
                      ++|++||++|++.|++++.+++..++  .++|.|||+|++++.+++.++++++.++|+++|+++|+||++||||   ||+
T Consensus       204 ~~l~~Pa~~cv~~V~~~l~~i~~~~~--~~~~~~fp~L~~~i~~~v~~~l~~~~~~a~~~i~~li~~E~~~i~T~~~~f~  281 (295)
T PF01031_consen  204 EKLEEPALQCVEEVHEELQRIVEQVL--EKEFERFPNLKEAIKEAVQQLLEECREPAKEMIENLIDMELSYINTQHPDFL  281 (295)
T ss_dssp             HTTHHHHHHHHHHHHHHHHHHHHHHH--CHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--TTSTT--
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHhhc--chhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHH
Confidence            99999999999999999999999998  6899999999999999999999999999999999999999999999   466


Q ss_pred             cc
Q 042048          168 RK  169 (286)
Q Consensus       168 ~~  169 (286)
                      +.
T Consensus       282 ~~  283 (295)
T PF01031_consen  282 GE  283 (295)
T ss_dssp             TT
T ss_pred             HH
Confidence            54

At the N terminus of dynamin is a GTPase domain (see IPR001401 from INTERPRO), and at the C terminus is a PH domain (see IPR001849 from INTERPRO). Between these two domains lies a central region of unknown function, which this entry represents.; GO: 0005525 GTP binding; PDB: 3ZVR_A 2AKA_B 2X2F_D 2X2E_D 3SNH_A 3ZYS_D 3ZYC_D 1JWY_B 1JX2_B 3SZR_A ....

>smart00302 GED Dynamin GTPase effector domain

Probab=99.95  E-value=1.6e-27  Score=182.86  Aligned_cols=90  Identities=42%  Similarity=0.592  Sum_probs=86.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHhHhhhhCCChHHHHHHHHHHHHHH
Q 042048          191 EGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLE  270 (286)
Q Consensus       191 ~~~~~~i~~~v~sYF~Iv~k~i~D~VPk~I~~~LV~~~~~~Lq~~L~~~L~~~~~~~~~~LL~Ed~~i~~kR~~l~~~l~  270 (286)
                      +.++++|+.++.|||+||+++++|+|||+||||||+.+++.||++|++.||+++  .+++||+|||+|++||+.|+++++
T Consensus         3 ~~~~~~i~~lv~sYf~iv~k~i~D~VPKaI~~~lv~~~~~~lq~~L~~~L~~~~--~~~~LL~E~~~i~~kR~~~~~~l~   80 (92)
T smart00302        3 DSELEEIKSLVKSYFTIVSKTLADQVPKAIMYLLVNESKDSLQNELLALLYKEE--LLDELLEEDPEIASKRKELKKRLE   80 (92)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCcc--cHHHHHcCCHHHHHHHHHHHHHHH
Confidence            347889999999999999999999999999999999999999999999999985  699999999999999999999999


Q ss_pred             HHHHHHHHhhhc
Q 042048          271 LYKSARDEIDSV  282 (286)
Q Consensus       271 ~L~~A~~~L~~i  282 (286)
                      +|++|+++|++|
T Consensus        81 ~L~~A~~~l~~v   92 (92)
T smart00302       81 LLKKARQIIAAV   92 (92)
T ss_pred             HHHHHHHHHhcC
Confidence            999999999875

>PF02212 GED: Dynamin GTPase effector domain; InterPro: IPR003130 Dynamin GTPase effector domain found in proteins related to dynamin

Probab=99.91  E-value=3.6e-24  Score=164.43  Aligned_cols=89  Identities=28%  Similarity=0.497  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHhHhhhhCCChHHHHHHHHHHHHHHH
Q 042048          192 GHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLEL  271 (286)
Q Consensus       192 ~~~~~i~~~v~sYF~Iv~k~i~D~VPk~I~~~LV~~~~~~Lq~~L~~~L~~~~~~~~~~LL~Ed~~i~~kR~~l~~~l~~  271 (286)
                      .++++|++++.|||+||++|++|+|||+|+|+||+++.+.|+.+|++.|+..+  .+++||+|||+|+++|+.|++++++
T Consensus         4 ~~~~~i~~~l~aY~~ia~kr~~D~Vpk~I~~~lv~~~~~~L~~~l~~~l~~~~--~~~~Ll~Ed~~i~~kR~~l~~~~~~   81 (92)
T PF02212_consen    4 REVEEIKALLRAYFEIARKRFIDSVPKAIMHFLVNKSKEQLQSELLNELYDEE--DLEELLQEDPEIAEKREELKKKLER   81 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCG--GCCCCT--GHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHhccchH--HHHHHHCCCHHHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999999999999999986  4999999999999999999999999


Q ss_pred             HHHHHHHhhhc
Q 042048          272 YKSARDEIDSV  282 (286)
Q Consensus       272 L~~A~~~L~~i  282 (286)
                      |++|+++|++|
T Consensus        82 L~~A~~~L~~~   92 (92)
T PF02212_consen   82 LKKAQQILSEV   92 (92)
T ss_dssp             HHHHHHHHHC-
T ss_pred             HHHHHHHHHcC
Confidence            99999999875

Dynamin is a GTP-hydrolysing protein that is an essential participant in clathrin-mediated endocytosis by cells. It self-assembles into 'collars' in vivo at the necks of invaginated coated pits; the self-assembly of dynamin being coordinated by the GTPase domain. Mutation studies indicate that dynamin functions as a molecular regulator of receptor-mediated endocytosis [].; GO: 0003924 GTPase activity, 0005525 GTP binding; PDB: 3ZYS_B 3SZR_A 3LJB_B 3T35_C 3T34_A 2X2F_D 2X2E_D 3SNH_A 3ZYC_D 3ZVR_A.

>COG0699 Predicted GTPases (dynamin-related) [General function prediction only]

Probab=97.77  E-value=0.0054  Score=60.41  Aligned_cols=237  Identities=15%  Similarity=0.170  Sum_probs=175.2

Q ss_pred             ccccchhHHHHhHHhhhhhh-ccCcCCCCCHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHH
Q 042048           29 DWDGHQKRSLLIDHGLFEVI-MLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFV  107 (286)
Q Consensus        29 el~gGaRI~~if~~~f~~~i-~~~~~~~l~~~dI~~~i~n~~G~~~plFvp~~aFe~Lvk~qI~~l~~Ps~~cv~~V~~~  107 (286)
                      ++.+|+|+...        . .+.....+.+..+.....++.|.++..|.+..++..+|..++..+..++.+|+..+...
T Consensus       235 ~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~  306 (546)
T COG0699         235 ELVRGARIRLN--------IILFSDLEEVSDSPVLLKELASKGERPSLLSGLTLLDTLVETPIGQFDTQINQLLRKLISE  306 (546)
T ss_pred             HHhccchhhhh--------hcccchHHHhhhhhhHHHHHcccCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            45666666655        2 22333367888899999999999999999999999999999999999998887766666


Q ss_pred             HHHHHHHHhcccccCCCchhHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhhhhcCCH---HhhccCc--hhhhhc-----
Q 042048          108 LKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTV---DFFRKLP--QDIERV-----  177 (286)
Q Consensus       108 l~~iv~~~~~~~~~f~rFp~L~~~v~~~i~~~l~~~~~~a~~~i~~li~~E~~yint---d~~~~~~--~~~~~~-----  177 (286)
                      +.++..... ......+||.+...+...+.++........+..+...++.+..|++|   ++.....  ....+.     
T Consensus       307 l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  385 (546)
T COG0699         307 LVRILLKEL-ESASSSPFPKLSEALEEVVNQLKNKVDSGLESGLLAIIDIEERYINTKHPLFLSLRQAAAILSKVLDNLE  385 (546)
T ss_pred             HHHHHHhhh-cccccccchhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHH
Confidence            666533332 24567999999999999999999999999999999999999999985   1211000  000000     


Q ss_pred             ------C--CCCCC----------------------------------C----CC-----------CCCC---hHHHHHH
Q 042048          178 ------G--NPTAP----------------------------------S----AA-----------DRYT---EGHFRRI  197 (286)
Q Consensus       178 ------~--~~~~~----------------------------------~----~~-----------~~~~---~~~~~~i  197 (286)
                            +  .+.+.                                  +    ..           ...+   ..+...+
T Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  465 (546)
T COG0699         386 ALLRSLDDSRLRELSDMGLNSLLSNNLEEHLLGSDFSLYKFLNEFLELKKLDALLATLGEALRRLTGLLPERKTLEKQLI  465 (546)
T ss_pred             HHHHhhccccccchhhcccchhHHHHHHHHhhcchhhHHHHHHHHhhhccchhhhccchHHHHHhhcccchhhhhhhHHH
Confidence                  0  00000                                  0    00           0001   1233567


Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHhHhhhhCCChHHHHHHHHHHHHHHHHHHHHH
Q 042048          198 GSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARD  277 (286)
Q Consensus       198 ~~~v~sYF~Iv~k~i~D~VPk~I~~~LV~~~~~~Lq~~L~~~L~~~~~~~~~~LL~Ed~~i~~kR~~l~~~l~~L~~A~~  277 (286)
                      ..++.+| .++...+.|.+++++++.+.+..+...+......++...  ..+.+..+.+.+.+.|..+......+.++..
T Consensus       466 ~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  542 (546)
T COG0699         466 KSLLESL-LILAQKIRDSVLKAIFELLKNKRKRLAQKQRLKRLYLEQ--LEDELLRTAEEILELRLLLEQFLEALKLAAR  542 (546)
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999 999999999999999999988777777777777777664  5788888999999999999999999888865

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	286
3t34_A	360	Arabidopsis Thaliana Dynamin-Related Protein 1a (At		3e-04

>pdb|3T34|A Chain A, Arabidopsis Thaliana Dynamin-Related Protein 1a (Atdrp1a) In Prefission State Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 245 GKQLAQLLDE--DPMLMERRQQCAKRLELYKSARDEIDSV 282
           GK +A   D   DP +MERR   +KRLELY++A+ EID+V
Sbjct: 321 GKPIAHGTDSRVDPAIMERRSAISKRLELYRAAQSEIDAV 360

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	286
3szr_A	608	Interferon-induced GTP-binding protein MX1; interf	3e-30
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	8e-25
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	3e-20
3ljb_A	271	Interferon-induced GTP-binding protein MX1; four-h	8e-09

>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B Length = 608

 Score =  118 bits (296), Expect = 3e-30
 Identities = 28/249 (11%), Positives = 71/249 (28%), Gaps = 23/249 (9%)

Query: 32  GHQKRSLLIDHGLFEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALN 91
             + R                   +  + ++K  ++A   +       + +  ++   + 
Sbjct: 379 FTRLRHEFHKWSTIIENNFQEGHKILSRKIQKFENQAAAAELPGFVNYRTFETIVKQQIK 438

Query: 92  YFRGPAEASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTT 151
               PA   +  V  +++          +  + F  L     +   +       + +K  
Sbjct: 439 ALEEPAVDMLHTVTDMVRLAFTDVS--IKNFEEFFNLHRTAKSKIEDIRAEQEREGEKLI 496

Query: 152 MRLVEMESSYLTVDFFRKLPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSET 211
               +ME                           +   T+     I  ++ +Y    S+ 
Sbjct: 497 RLHFQMEQIVYGAFQ-------------------SSSATDSSMEEIFQHLMAYHQEASKR 537

Query: 212 LKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLEL 271
           + + IP  +    ++   + L       L  K+    + LL E     ++R+   +RL  
Sbjct: 538 ISSHIPLIIQFFMLQTYGQQLQKAMLQLLQDKD--TYSWLLKERSDTSDKRKFLKERLAR 595

Query: 272 YKSARDEID 280
              AR  + 
Sbjct: 596 LTQARRRLA 604

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A Length = 772

 Score =  103 bits (256), Expect = 8e-25
 Identities = 23/116 (19%), Positives = 49/116 (42%), Gaps = 2/116 (1%)

Query: 168 RKLPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKE 227
           ++   + E  G+ +   + D   E     I + V SY+ +V++T+++ +PK ++H  +  
Sbjct: 653 KEKASETEENGSDSFMHSMDPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINN 712

Query: 228 AKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVS 283
            K  +     A L          L++E     +RR +  +     K A   I  ++
Sbjct: 713 TKEFIFSELLANLYSCG--DQNTLMEESAEQAQRRDEMLRMYHALKEALSIIGDIN 766

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A Length = 772

 Score = 89.5 bits (221), Expect = 3e-20
 Identities = 25/163 (15%), Positives = 61/163 (37%), Gaps = 5/163 (3%)

Query: 50  LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
           + FD     + +   +      +  L  P+  +   +   +   + P+   VD V   L 
Sbjct: 397 MEFDEKELRREISYAIKNIHDIRTGLFTPDLAFEATVKKQVQKLKEPSIKCVDMVVSELT 456

Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVD--FF 167
             +R+    +++L+++P L+ E+       +      +K+  M L+++E +Y+  +   F
Sbjct: 457 STIRKC---SEKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNHEDF 513

Query: 168 RKLPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSE 210
                  +R         +    E    R G    + +G++  
Sbjct: 514 IGFANAQQRSNQMNKKKTSGNQDEILVIRKGWLTINNIGIMKG 556

>3ljb_A Interferon-induced GTP-binding protein MX1; four-helix-bundle, antiviral protein; 2.40A {Homo sapiens} Length = 271

 Score = 54.2 bits (130), Expect = 8e-09
 Identities = 24/216 (11%), Positives = 64/216 (29%), Gaps = 14/216 (6%)

Query: 51  PFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKE 110
                +  + ++K  ++  G +       + +  ++   +     PA   +  V  +++ 
Sbjct: 58  QEGHKILSRKIQKFENQYRGRELPGFVNYRTFETIVKQQIKALEEPAVDMLHTVTDMVRL 117

Query: 111 LVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVD--FFR 168
                    +  + F  L     +   +       + +K      +ME      D  +  
Sbjct: 118 AFTDVS--IKNFEEFFNLHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQIVYCQDQVYRG 175

Query: 169 KLPQDIERVGNPTAPSAADRYTEGHFRR--------IGSNVSSYVGMVSETLKNTIPKAV 220
            L +  E+         +  +               I  ++ +Y    S+ + + IP  +
Sbjct: 176 ALQKVREKELEEEKKKKSWDFGAFQSSSATDSSMEEIFQHLMAYHQEASKRISSHIPLII 235

Query: 221 VHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDP 256
               ++   + L       L  K+    + LL E  
Sbjct: 236 QFFMLQTYGQQLQKAMLQLLQDKD--TYSWLLKERS 269

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	286
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	100.0
3ljb_A	271	Interferon-induced GTP-binding protein MX1; four-h	100.0
3szr_A	608	Interferon-induced GTP-binding protein MX1; interf	100.0

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A

Probab=100.00  E-value=6.7e-54  Score=433.71  Aligned_cols=272  Identities=17%  Similarity=0.307  Sum_probs=219.6

Q ss_pred             HHHHhhhhhhcCcccccccCccccchhHHHHhHHhhhhhh-ccCcCCCCCHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 042048            9 KTLMDFPHLGGGLIVSLEVGDWDGHQKRSLLIDHGLFEVI-MLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLID   87 (286)
Q Consensus         9 ~~l~~~~~~~~g~~~~~~~~el~gGaRI~~if~~~f~~~i-~~~~~~~l~~~dI~~~i~n~~G~~~plFvp~~aFe~Lvk   87 (286)
                      .|-.+|.+.++|...++++.+++|||||+++|++.|++.+ .+++++.++++||+++|+|++|+++++|+|+.+||.||+
T Consensus       355 ~f~~~~~~~i~G~~~~~~~~el~ggari~~if~~~f~~~~~~~~~~~~~~~~~I~~~i~n~~G~~~~lf~p~~~fe~LVk  434 (772)
T 3zvr_A          355 QFAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVKMEFDEKELRREISYAIKNIHDIRTGLFTPDLAFEATVK  434 (772)
T ss_dssp             HHHHHHHHHHTC---------CCHHHHHHHHHHTHHHHHHHTTSCCHHHHHHHHHHHHHHCC------CHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcccCCCCeeeehhHHHHhHHHHhcCCCchhhhHHHHHHHHHhCCCCCCCCCChHHHHHHHHH
Confidence            4555777788899988999999999999999999999999 999888999999999999999999999999999999999


Q ss_pred             HHHhhccccHHHHHHHHHHHHHHHHHHHhcccccCCCchhHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhhhhcCCH---
Q 042048           88 SALNYFRGPAEASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTV---  164 (286)
Q Consensus        88 ~qI~~l~~Ps~~cv~~V~~~l~~iv~~~~~~~~~f~rFp~L~~~v~~~i~~~l~~~~~~a~~~i~~li~~E~~yint---  164 (286)
                      +||++|++||++||+.|+++|.+++++|.   ++|.|||+|++++.+++.++|++++.+|+++|.++|+||.+||||   
T Consensus       435 ~QI~rl~ePsl~CVdlV~~eL~~iv~~~~---~~l~RfP~Lr~ei~~iv~~~Lre~~~~t~~~V~~LId~E~ayintnHp  511 (772)
T 3zvr_A          435 KQVQKLKEPSIKCVDMVVSELTSTIRKCS---EKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNHE  511 (772)
T ss_dssp             HHHHTTHHHHHHHHHHHHHHHHHHHHHHG---GGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCh
Confidence            99999999999999999999999999884   689999999999999999999999999999999999999999999   


Q ss_pred             HhhccCc------h---------h----h---------h----hcCCC---------------------------CC---
Q 042048          165 DFFRKLP------Q---------D----I---------E----RVGNP---------------------------TA---  182 (286)
Q Consensus       165 d~~~~~~------~---------~----~---------~----~~~~~---------------------------~~---  182 (286)
                      ||.+...      +         +    .         +    ++|..                           ..   
T Consensus       512 df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  591 (772)
T 3zvr_A          512 DFIGFANAQQRSNQMNKKKTSGNQDEILVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLK  591 (772)
T ss_dssp             TCCCC---------------------CCEEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTTCCCEEEEEECTTEE
T ss_pred             hhhchHHHHHHHHHHhhcccccCCccccceeeeeeeecccccccCCCccceeeccccccccccchhhhcccccccccccc
Confidence            4665321      0         0    0         0    00000                           00   


Q ss_pred             ---------------------CC-------------------------C-----CC----------C------------C
Q 042048          183 ---------------------PS-------------------------A-----AD----------R------------Y  189 (286)
Q Consensus       183 ---------------------~~-------------------------~-----~~----------~------------~  189 (286)
                                           ..                         +     ++          .            .
T Consensus       592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (772)
T 3zvr_A          592 LRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRAGVYPERVGDKEKASETEENGSDSFMHSM  671 (772)
T ss_dssp             EEEC-------CEEEEEEETTSSCSBTTBSEEEEEESSHHHHHHHHHHHHHTTCCBC-----------------------
T ss_pred             cchhhhccccccccccccCCccccccchhhhhhhhccccccchhhHHhhhhcccCCccccccccccccCCccccccccCC
Confidence                                 00                         0     00          0            0


Q ss_pred             Ch---HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHhHhhhhCCChHHHHHHHHHH
Q 042048          190 TE---GHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCA  266 (286)
Q Consensus       190 ~~---~~~~~i~~~v~sYF~Iv~k~i~D~VPk~I~~~LV~~~~~~Lq~~L~~~L~~~~~~~~~~LL~Ed~~i~~kR~~l~  266 (286)
                      .+   .+++.|+.+|+|||.||+|++.|.|||+|||+|||.+++.++.+|++.||..+  .++.||+|+|++++||++|.
T Consensus       672 ~~q~~~q~e~~~~l~~sy~~iv~k~~~d~~pk~im~~~vn~~k~~~~~el~~~ly~~~--~~~~lm~Es~~~~~~r~~~~  749 (772)
T 3zvr_A          672 DPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYSCG--DQNTLMEESAEQAQRRDEML  749 (772)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHTC--CTTTTTCCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--CHHHHHhcCHHHHHHHHHHH
Confidence            00   25789999999999999999999999999999999999999999999999996  69999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhcccC
Q 042048          267 KRLELYKSARDEIDSVSWT  285 (286)
Q Consensus       267 ~~l~~L~~A~~~L~~i~~~  285 (286)
                      +++++|++|..+|.+|.++
T Consensus       750 ~~~~~l~~a~~ii~~i~~~  768 (772)
T 3zvr_A          750 RMYHALKEALSIIGDINTT  768 (772)
T ss_dssp             HHHHHHHHHHHHHC-----
T ss_pred             HHHHHHHHHHHHHHhcccc
Confidence            9999999999999999864

>3ljb_A Interferon-induced GTP-binding protein MX1; four-helix-bundle, antiviral protein; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.1e-53  Score=381.93  Aligned_cols=251  Identities=13%  Similarity=0.139  Sum_probs=194.4

Q ss_pred             HHHHHHHHHhhhhhhcCcccccccCc---cccchhHHHHhHHhhhhhh-ccCcCC----CCCHHHHHHHHHhcCCCCCCC
Q 042048            4 IATGMKTLMDFPHLGGGLIVSLEVGD---WDGHQKRSLLIDHGLFEVI-MLPFDR----HLSPQNVRKVVSEADGYQPHL   75 (286)
Q Consensus         4 ~~~~~~~l~~~~~~~~g~~~~~~~~e---l~gGaRI~~if~~~f~~~i-~~~~~~----~l~~~dI~~~i~n~~G~~~pl   75 (286)
                      -++-|+||++.++.|++++.++..||   ..||+||++.+++.|.+|. .++...    ....++|.+++++|+|+++||
T Consensus         3 ~~e~~~FLidkI~~F~~di~~l~~Gee~~~~~~~rlf~~lr~eF~~w~~~l~~~~~~~~~~i~~ev~~~e~~~rGrELPg   82 (271)
T 3ljb_A            3 ENEKMFFLIDKVNAFNQDITALMQGEETVGEEDIRLFTRLRHEFHKWSTIIENNFQEGHKILSRKIQKFENQYRGRELPG   82 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCceecccCCcchHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHccCcccCC
Confidence            36789999999999999999999997   3455999999999999999 774321    233589999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcccccCCCchhHHHHHHHHHHHHHHHhHHhHHHHHHHHH
Q 042048           76 IAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLV  155 (286)
Q Consensus        76 Fvp~~aFe~Lvk~qI~~l~~Ps~~cv~~V~~~l~~iv~~~~~~~~~f~rFp~L~~~v~~~i~~~l~~~~~~a~~~i~~li  155 (286)
                      |+||.|||.||++||++|++||++|++.|++++.+++..++  .++|+|||+|++++.++|.+++.+|..+|++||+++|
T Consensus        83 Fv~y~aFE~lVk~qI~~LeePAl~cl~~V~e~l~~~~~~i~--~~~F~rFpnL~~~i~~~i~~i~~~~~~~Ae~~I~~~~  160 (271)
T 3ljb_A           83 FVNYRTFETIVKQQIKALEEPAVDMLHTVTDMVRLAFTDVS--IKNFEEFFNLHRTAKSKIEDIRAEQEREGEKLIRLHF  160 (271)
T ss_dssp             CTTHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH--HHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999888  6899999999999999999999999999999999999


Q ss_pred             HhhhhcCCHH-hhccCchhh-----hhc-CCCCCCCCC--CCCCh-HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 042048          156 EMESSYLTVD-FFRKLPQDI-----ERV-GNPTAPSAA--DRYTE-GHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQV  225 (286)
Q Consensus       156 ~~E~~yintd-~~~~~~~~~-----~~~-~~~~~~~~~--~~~~~-~~~~~i~~~v~sYF~Iv~k~i~D~VPk~I~~~LV  225 (286)
                      +||+.++++| .|.+..+..     +.. ..+..+.++  ...+. ..+.+|+.++.|||+||++|++|+|||+|+|+||
T Consensus       161 ~mE~~vytqD~~Y~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~~l~sYf~i~~~rl~d~IP~~I~~~ll  240 (271)
T 3ljb_A          161 QMEQIVYCQDQVYRGALQKVREKELEEEKKKKSWDFGAFQSSSATDSSMEEIFQHLMAYHQEASKRISSHIPLIIQFFML  240 (271)
T ss_dssp             HHHTSCC----------------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhcccccCCHHHHHHHHHHHHHHhcccccccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence            9999766656 444332111     110 000000011  12223 5688999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhchhhHhHhhhhCCChHH
Q 042048          226 KEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPML  258 (286)
Q Consensus       226 ~~~~~~Lq~~L~~~L~~~~~~~~~~LL~Ed~~i  258 (286)
                      +.++++||++|++.||..+  .+++||+|||++
T Consensus       241 ~~~~~~lQ~~ml~~l~~~~--~~~~LL~E~~d~  271 (271)
T 3ljb_A          241 QTYGQQLQKAMLQLLQDKD--TYSWLLKERSDT  271 (271)
T ss_dssp             HHHHHHHHHHHHHTTSCGG--GHHHHTCCC---
T ss_pred             HHHHHHHHHHHHHHHhchh--hHHHHhcCCCCC
Confidence            9999999999999999986  799999999985

>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B

Probab=100.00  E-value=1.6e-49  Score=396.29  Aligned_cols=254  Identities=14%  Similarity=0.150  Sum_probs=214.1

Q ss_pred             HHHHHHHhhhhhhcCcccccccCc-cccc--hhHHHHhHHhhhhhh-ccC----cCCCCCHHHHHHHHHhcCCCCCCCCC
Q 042048            6 TGMKTLMDFPHLGGGLIVSLEVGD-WDGH--QKRSLLIDHGLFEVI-MLP----FDRHLSPQNVRKVVSEADGYQPHLIA   77 (286)
Q Consensus         6 ~~~~~l~~~~~~~~g~~~~~~~~e-l~gG--aRI~~if~~~f~~~i-~~~----~~~~l~~~dI~~~i~n~~G~~~plFv   77 (286)
                      +-+.+|++.++.|.......-+|+ ..||  +|+++.+++.|.+|. .+.    ......++||+++++|++|+++|||+
T Consensus       345 ~~~~~l~~~~~~f~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~f~  424 (608)
T 3szr_A          345 EKMFFLIDKVNAFNQDITALMQGEETVGEEDIRLFTRLRHEFHKWSTIIENNFQEGHKILSRKIQKFENQAAAAELPGFV  424 (608)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSSCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCSSSCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCcCCCccccHHHHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHccCCCCCCCc
Confidence            334455555555544333333333 3333  677777777777777 542    22256789999999999999999999


Q ss_pred             CHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcccccCCCchhHHHHHHHHHHHHHHHhHHhHHHHHHHHHHh
Q 042048           78 PEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEM  157 (286)
Q Consensus        78 p~~aFe~Lvk~qI~~l~~Ps~~cv~~V~~~l~~iv~~~~~~~~~f~rFp~L~~~v~~~i~~~l~~~~~~a~~~i~~li~~  157 (286)
                      |+.|||.||++||++|++||++|++.|++++..++..++  .++|+|||+|++++.+++.++++++.++|+++|+++|+|
T Consensus       425 ~~~~fe~lvk~qi~~l~~Pa~~~v~~V~~~v~~~~~~~~--~~~f~rfp~L~~~~~~~i~~~~~~~~~~a~~~i~~li~m  502 (608)
T 3szr_A          425 NYRTFETIVKQQIKALEEPAVDMLHTVTDMVRLAFTDVS--IKNFEEFFNLHRTAKSKIEDIRAEQEREGEKLIRLHFQM  502 (608)
T ss_dssp             CTHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHH--HHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999887  689999999999999999999999999999999999999


Q ss_pred             hhhcCCHH-hhccCchhhhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 042048          158 ESSYLTVD-FFRKLPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHF  236 (286)
Q Consensus       158 E~~yintd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~sYF~Iv~k~i~D~VPk~I~~~LV~~~~~~Lq~~L  236 (286)
                      |+.|+++| +|..                    ....+.+|+.+|+|||+||+||++|+|||+||||||+.+++.||++|
T Consensus       503 E~~~~~~d~~~~~--------------------~~~~~~ei~~~l~sY~~iv~~~~~D~vP~~I~~~lv~~~~~~lq~~l  562 (608)
T 3szr_A          503 EQIVYGAFQSSSA--------------------TDSSMEEIFQHLMAYHQEASKRISSHIPLIIQFFMLQTYGQQLQKAM  562 (608)
T ss_dssp             HHHCCCC-----------------------------CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred             hhccccCCccccC--------------------CCccHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            99998876 4431                    01123469999999999999999999999999999999999999999


Q ss_pred             HHHHhchhhHhHhhhhCCChHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 042048          237 YAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVS  283 (286)
Q Consensus       237 ~~~L~~~~~~~~~~LL~Ed~~i~~kR~~l~~~l~~L~~A~~~L~~i~  283 (286)
                      ++.||+.+  .+++||+|||++++||+.|++++++|++|+++|.++.
T Consensus       563 ~~~l~~~~--~~~~ll~E~~~~~~~R~~l~~~~~~L~~A~~~l~~~~  607 (608)
T 3szr_A          563 LQLLQDKD--TYSWLLKERSDTSDKRKFLKERLARLTQARRRLAQFP  607 (608)
T ss_dssp             HTTTTCHH--HHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHhcch--hHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999875  6999999999999999999999999999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00