Citrus Sinensis ID: 043067

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120--
Protein Sequence
MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQHETPARATKL
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEcccccccccccccc
Coil and Loop (DISEMBL)
mmgeelsglsvkDLQNLENQLEMSlrgvrmkkDQILMDEIQELSRKGNLIHQENVELYKKVNLIRQENMELYTKVygtrdlngsnrnplhtnnigigedshipvrlqlsqpqhetparatkl
Flexible Loop (DISEMBL)
mmgeelsglsvkdlQNLENQLEmslrgvrmkkDQILMDEIQElsrkgnlihqenVELYKKVNLIRQENMELYTKVYgtrdlngsnrnPLHTNNIGIGEDSHIPVRLqlsqpqhetparatkl
Low Complexity Region (SEG)
MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQHETPARATKL
Disordered region (IsUnstruct)
**********************************ILMDEIQELSRKGNLIHQENVELYKKVNLIRQENMELYTKVYGTRDLN****************************************
Disordered Region (DISOPRED)
MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVE************************************************RLQL**************
Disordered Region (DISEMBL)
********LSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLS*************
Disordered Region (DISPRO)
*****LSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIRQENMELYTKVYGTR************NNIGIGEDSHIPVRLQLS*************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQHETPARATKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	122	2.2.26 [Sep-21-2011]
A2RVQ5	240	Agamous-like MADS-box pro	yes	no	1.0	0.508	0.612	5e-34
Q6EP49	240	MADS-box transcription fa	no	no	0.983	0.5	0.570	5e-32
Q38840	227	Agamous-like MADS-box pro	no	no	0.885	0.475	0.580	6e-29
Q9SZJ6	228	Agamous-like MADS-box pro	no	no	0.926	0.495	0.544	9e-29
Q6Z6W2	241	MADS-box transcription fa	no	no	0.901	0.456	0.483	1e-22
Q9SI38	234	MADS-box transcription fa	no	no	0.959	0.5	0.443	4e-19
Q84NC5	227	MADS-box transcription fa	no	no	0.909	0.488	0.403	1e-16
Q6VAM4	159	MADS-box transcription fa	no	no	0.377	0.289	0.630	3e-11
Q9XJ66	228	MADS-box transcription fa	no	no	0.524	0.280	0.468	1e-07
D7KQR8	256	Transcription factor CAUL	N/A	no	0.491	0.234	0.45	2e-07

>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana GN=AGL16 PE=1 SV=1

 Score =  142 bits (358), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 76/124 (61%), Positives = 100/124 (80%), Gaps = 2/124 (1%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           MMGEELSGLSV+ LQNLENQLE+SLRGVRMKKDQ+L++EIQ L+R+GNL+HQEN++L+KK
Sbjct: 110 MMGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKK 169

Query: 61  VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQ--HETPAR 118
           VNL+ Q+NMEL+ KV     +  +N+N L TN + + + S+  V LQLSQPQ  HET ++
Sbjct: 170 VNLMHQQNMELHEKVSEVEGVKIANKNSLLTNGLDMRDTSNEHVHLQLSQPQHDHETHSK 229

Query: 119 ATKL 122
           A +L
Sbjct: 230 AIQL 233

Probable transcription factor.
Arabidopsis thaliana (taxid: 3702)

>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2

 Score =  136 bits (342), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 93/121 (76%), Gaps = 1/121 (0%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           +MGE+LSGL+VK+LQ+LENQLE+SLR VR KKD +L+DEI EL+RKG+L+HQEN+ELYKK
Sbjct: 110 LMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKK 169

Query: 61  VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQ-PQHETPARA 119
           ++LIRQEN ELY K+Y T   +  NR+     N  + E +++PV+L LS  PQH    ++
Sbjct: 170 ISLIRQENAELYKKIYETEGPSEVNRDSPTPYNFAVIEKTNVPVQLGLSTLPQHSDAEQS 229

Query: 120 T 120
           T
Sbjct: 230 T 230

Probable transcription factor.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q38840|AGL17_ARATH Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2

 Score =  125 bits (315), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 85/112 (75%), Gaps = 4/112 (3%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           + G EL+GLSVK+LQN+E+QLEMSLRG+RMK++QIL +EI+EL+RK NL+H EN+EL +K
Sbjct: 110 LTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRK 169

Query: 61  VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQ 112
           V  I QEN+ELY K YGT + NG   + L    +    +SH  VRLQLSQP+
Sbjct: 170 VQRIHQENVELYKKAYGTSNTNGLGHHEL----VDAVYESHAQVRLQLSQPE 217

Probable transcription factor.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1

 Score =  125 bits (313), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 67/123 (54%), Positives = 89/123 (72%), Gaps = 10/123 (8%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           MMGE+L+GLSV +L +LENQ+E+SLRG+RM+K+Q+L  EIQELS+K NLIHQEN++L +K
Sbjct: 110 MMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRK 169

Query: 61  VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGED-SHIPVRLQLSQPQH---ETP 116
           V  I QEN+ELY K Y       +N N      + + +D SH  +RLQLSQP+H   +TP
Sbjct: 170 VQRIHQENVELYKKAY------MANTNGFTHREVAVADDESHTQIRLQLSQPEHSDYDTP 223

Query: 117 ARA 119
            RA
Sbjct: 224 PRA 226

Probable transcription factor.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/118 (48%), Positives = 82/118 (69%), Gaps = 8/118 (6%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           +MGEELSGL V+DLQ LEN+LE+SLR +RM+KD +L  EI+EL  KG+LIHQEN+EL + 
Sbjct: 109 LMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRS 168

Query: 61  VNLIRQENMELYTKV-----YGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQH 113
           +N++ Q+ +ELY K+      G  D N S+  P    +  I +++++P  L+LSQ Q 
Sbjct: 169 LNVMSQQKLELYNKLQACEQRGATDANESSSTPY---SFRIIQNANMPPSLELSQSQQ 223

Probable transcription factor.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SI38|ANR1_ARATH MADS-box transcription factor ANR1 OS=Arabidopsis thaliana GN=ANR1 PE=1 SV=1

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/124 (44%), Positives = 86/124 (69%), Gaps = 7/124 (5%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           ++GEELSG++  DLQNLE+QL  SL+GVR+KKDQ++ +EI+EL+RKG +I +EN EL   
Sbjct: 111 LVGEELSGMNANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNI 170

Query: 61  VNLIRQENMELYTKVYG-TRDLNG-SNRNPLHTNNIGIGEDSHIPVRLQLSQPQHETPAR 118
           V+++R+EN++L  KV+G T  + G S+ +P+       G  ++ P +LQL Q Q     +
Sbjct: 171 VDIMRKENIKLQKKVHGRTNAIEGNSSVDPISN-----GTTTYAPPQLQLIQLQPAPREK 225

Query: 119 ATKL 122
           + +L
Sbjct: 226 SIRL 229

Probable transcription factor. Required for root plasticity in response to nitrate, NO(3)(-). Promotes lateral root growth in a NRT1.1-dependent manner.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84NC5|MAD25_ORYSJ MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 78/119 (65%), Gaps = 8/119 (6%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           ++GEE+S  +V+DLQ L+NQ+EMSL  +R KKDQ+L +EI +L+ KG+L+ +EN EL KK
Sbjct: 110 LLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKK 169

Query: 61  VNLIRQENMELYTKV-----YGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQHE 114
            N+  Q N+EL+ K+       +  +  S+++P  ++      DS + + L+LSQ + E
Sbjct: 170 FNIAHQRNIELHKKLNSGESTSSEQVTRSSKDPGESST---PRDSRVCIDLELSQKEVE 225

Probable transcription factor.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 43/46 (93%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRK 46
           ++G++LSGL V+DLQNLE++LEMSL+ +R++KD ++MD+IQELSRK
Sbjct: 110 LLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155

Probable transcription factor.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 42/64 (65%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           M GEEL GLS+ +LQ LE  LE  L  V + KDQ  M++I EL RK + + +EN++L  +
Sbjct: 110 MRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQ 169

Query: 61  VNLI 64
           V+ I
Sbjct: 170 VSQI 173

Probable transcription factor. May be required for spikelet (rice flower) development.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|D7KQR8|CAL_ARALL Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp. lyrata GN=CAL PE=3 SV=1

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 43/60 (71%)

Query: 2   MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
           +GE+L  +S+KDLQNLE QLE +L+ +R +K+Q++ + +  L RK N I +EN  L K++
Sbjct: 115 LGEDLEPMSLKDLQNLEQQLETALKHIRSRKNQLMYESLNHLQRKENEIQEENSMLTKQI 174

Probable transcription factor that promotes early floral meristem identity in synergy with APETALA1, FRUITFULL and LEAFY. Is required subsequently for the transition of an inflorescence meristem into a floral meristem. Seems to be partially redundant to the function of APETALA1.

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	122
359492513	320	PREDICTED: MADS-box transcription factor	0.991	0.378	0.793	1e-49
302142098	240	unnamed protein product [Vitis vinifera]	0.991	0.504	0.793	2e-49
224084526	244	predicted protein [Populus trichocarpa]	1.0	0.5	0.792	2e-48
255572836	262	mads box protein, putative [Ricinus comm	1.0	0.465	0.752	1e-45
356552982	239	PREDICTED: MADS-box transcription factor	1.0	0.510	0.744	2e-44
449437272	234	PREDICTED: MADS-box transcription factor	0.991	0.517	0.728	3e-43
449515720	263	PREDICTED: agamous-like MADS-box protein	0.991	0.460	0.728	7e-43
147769456	123	hypothetical protein VITISV_002570 [Viti	0.877	0.869	0.706	2e-39
224067112	228	predicted protein [Populus trichocarpa]	0.868	0.464	0.696	3e-38
356498871	243	PREDICTED: MADS-box transcription factor	0.852	0.427	0.778	5e-38

>gi|359492513|ref|XP_002283694.2| PREDICTED: MADS-box transcription factor 27 [Vitis vinifera]

 Score =  199 bits (507), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 100/126 (79%), Positives = 111/126 (88%), Gaps = 5/126 (3%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQIL+DEIQEL++KGNL+H ENVELYKK
Sbjct: 110 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILIDEIQELNQKGNLLHNENVELYKK 169

Query: 61  VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQHE----TP 116
           VNLIRQENMELY KVYGTR++NG+NRN   TN + IGED H+P+ LQL QPQ +    TP
Sbjct: 170 VNLIRQENMELYKKVYGTREVNGTNRNAF-TNGLSIGEDLHVPIHLQLCQPQQQNYETTP 228

Query: 117 ARATKL 122
           ARATKL
Sbjct: 229 ARATKL 234

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142098|emb|CBI19301.3| unnamed protein product [Vitis vinifera]

 Score =  199 bits (506), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 100/126 (79%), Positives = 111/126 (88%), Gaps = 5/126 (3%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQIL+DEIQEL++KGNL+H ENVELYKK
Sbjct: 110 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILIDEIQELNQKGNLLHNENVELYKK 169

Query: 61  VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQHE----TP 116
           VNLIRQENMELY KVYGTR++NG+NRN   TN + IGED H+P+ LQL QPQ +    TP
Sbjct: 170 VNLIRQENMELYKKVYGTREVNGTNRNAF-TNGLSIGEDLHVPIHLQLCQPQQQNYETTP 228

Query: 117 ARATKL 122
           ARATKL
Sbjct: 229 ARATKL 234

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084526|ref|XP_002307325.1| predicted protein [Populus trichocarpa] gi|222856774|gb|EEE94321.1| predicted protein [Populus trichocarpa]

 Score =  196 bits (497), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 99/125 (79%), Positives = 110/125 (88%), Gaps = 3/125 (2%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQ LMDEI EL+RKGNLIHQEN+ELYKK
Sbjct: 110 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQNLMDEILELNRKGNLIHQENMELYKK 169

Query: 61  VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQ---HETPA 117
            NLI  EN ELY KVYGTR++NG+NRN L TN +G+GE+SH+PV LQLSQPQ   ++TPA
Sbjct: 170 ANLICHENQELYKKVYGTREVNGANRNSLLTNGLGMGEESHVPVHLQLSQPQQQNYDTPA 229

Query: 118 RATKL 122
            ATKL
Sbjct: 230 SATKL 234

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572836|ref|XP_002527350.1| mads box protein, putative [Ricinus communis] gi|223533269|gb|EEF35022.1| mads box protein, putative [Ricinus communis]

 Score =  187 bits (474), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 94/125 (75%), Positives = 109/125 (87%), Gaps = 3/125 (2%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           MMGEELSGLS+K+LQNLE +LEMSLRGVRMKKDQ+LMDEI+EL+RKGNLIHQENVELYKK
Sbjct: 110 MMGEELSGLSIKELQNLEGRLEMSLRGVRMKKDQLLMDEIEELNRKGNLIHQENVELYKK 169

Query: 61  VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQ---HETPA 117
           VNLIRQEN ELY KVYGT + N +NR+ L TN +GIGE+ ++PV LQLSQPQ   ++ PA
Sbjct: 170 VNLIRQENTELYKKVYGTGNTNAANRDYLSTNGLGIGEEPNVPVHLQLSQPQQQNYDPPA 229

Query: 118 RATKL 122
           R TKL
Sbjct: 230 RTTKL 234

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552982|ref|XP_003544838.1| PREDICTED: MADS-box transcription factor 27-like [Glycine max]

 Score =  182 bits (462), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 93/125 (74%), Positives = 108/125 (86%), Gaps = 3/125 (2%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           MMGEELSGL+VK+LQNLENQLE+SLRGVRMKKDQ+LMDEIQEL+RKGNLIHQENVELY+K
Sbjct: 110 MMGEELSGLTVKELQNLENQLEISLRGVRMKKDQLLMDEIQELNRKGNLIHQENVELYQK 169

Query: 61  VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQ---HETPA 117
           VNLI QENMEL  KVYGT+D N +NR+ + TN +GIGED  +PV LQLSQPQ   ++ P+
Sbjct: 170 VNLICQENMELKKKVYGTKDDNKTNRDSVLTNGLGIGEDLQVPVNLQLSQPQQQHYKEPS 229

Query: 118 RATKL 122
             TKL
Sbjct: 230 GTTKL 234

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437272|ref|XP_004136416.1| PREDICTED: MADS-box transcription factor 27-like [Cucumis sativus]

 Score =  178 bits (452), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 108/125 (86%), Gaps = 4/125 (3%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           MMGEEL+GLSVKDLQNLENQLE+SLRGVRMKKDQILM+EIQEL+RKGNLIH +N+ELYKK
Sbjct: 110 MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMEEIQELNRKGNLIHHDNMELYKK 169

Query: 61  VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQ---HETPA 117
           VNLI QEN EL+ KVYGT+D NG++ + + TN + +GED+ IP+ LQLSQPQ   +E P 
Sbjct: 170 VNLIHQENQELHKKVYGTKDANGAHISSI-TNGLSVGEDAGIPINLQLSQPQQQDNEAPE 228

Query: 118 RATKL 122
           RATKL
Sbjct: 229 RATKL 233

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515720|ref|XP_004164896.1| PREDICTED: agamous-like MADS-box protein AGL16-like [Cucumis sativus]

 Score =  177 bits (449), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 107/125 (85%), Gaps = 4/125 (3%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           MMGEEL+GLSVKDLQNLENQLE+SLRGVRMKKDQILM+EIQEL+RKGNLIH +N+ELYKK
Sbjct: 49  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMEEIQELNRKGNLIHHDNMELYKK 108

Query: 61  VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQH---ETPA 117
           VNLI QEN EL+ KVYGT+D NG++ + + TN + +GED+ IP+ LQLSQPQ    E P 
Sbjct: 109 VNLIHQENQELHKKVYGTKDANGAHISSI-TNGLSVGEDAGIPINLQLSQPQQQDNEAPE 167

Query: 118 RATKL 122
           RATKL
Sbjct: 168 RATKL 172

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147769456|emb|CAN68105.1| hypothetical protein VITISV_002570 [Vitis vinifera]

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 89/126 (70%), Positives = 97/126 (76%), Gaps = 19/126 (15%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           MMGEELSGLSVKDLQNLENQLEMSLRGVRMK              KGNL+H ENVELYKK
Sbjct: 12  MMGEELSGLSVKDLQNLENQLEMSLRGVRMK--------------KGNLLHNENVELYKK 57

Query: 61  VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQHE----TP 116
           VNLIRQENMELY KVYGTR++NG+NRN   TN + IGED H+P+ LQL QPQ +    TP
Sbjct: 58  VNLIRQENMELYKKVYGTREVNGTNRNAF-TNGLSIGEDLHVPIHLQLCQPQQQNYETTP 116

Query: 117 ARATKL 122
           ARATKL
Sbjct: 117 ARATKL 122

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067112|ref|XP_002302361.1| predicted protein [Populus trichocarpa] gi|222844087|gb|EEE81634.1| predicted protein [Populus trichocarpa]

 Score =  162 bits (409), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 99/125 (79%), Gaps = 19/125 (15%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           MMGE+LSGLSV DLQNLE+QLEMSL+GVRMKKDQILMD+IQEL+RKGNLIHQENVELY+ 
Sbjct: 110 MMGEQLSGLSVTDLQNLESQLEMSLQGVRMKKDQILMDQIQELNRKGNLIHQENVELYQ- 168

Query: 61  VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQ---HETPA 117
                        KVYGTRD+N +NRN L TN + IGE+SH+PV LQLSQPQ   H+TP 
Sbjct: 169 -------------KVYGTRDVNRANRNSLLTNGLAIGEESHVPVHLQLSQPQQQNHDTP- 214

Query: 118 RATKL 122
            ATKL
Sbjct: 215 -ATKL 218

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498871|ref|XP_003518271.1| PREDICTED: MADS-box transcription factor 27-like [Glycine max]

 Score =  161 bits (407), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 81/104 (77%), Positives = 92/104 (88%)

Query: 1   MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
           MMGEELSGL+VK+LQNLENQLE+SL GVRMKKDQ+LM EIQEL+RKGNLIHQENVELYKK
Sbjct: 110 MMGEELSGLTVKELQNLENQLEISLHGVRMKKDQLLMGEIQELNRKGNLIHQENVELYKK 169

Query: 61  VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPV 104
           VNLI QENMEL  KVYGT+D N +NR+ + TN +GIGED  +PV
Sbjct: 170 VNLICQENMELKKKVYGTQDDNETNRDSVLTNGLGIGEDLQVPV 213

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	122
TAIR|locus:2082618	240	AGL16 "AGAMOUS-like 16" [Arabi	1.0	0.508	0.612	5.8e-34
TAIR|locus:2121070	228	AGL21 "AT4G37940" [Arabidopsis	0.942	0.504	0.536	1.2e-28
TAIR|locus:2066050	227	AGL17 "AGAMOUS-like 17" [Arabi	0.885	0.475	0.580	1.5e-28
TAIR|locus:2042182	234	AGL44 "AGAMOUS-like 44" [Arabi	0.967	0.504	0.439	6.3e-21
TAIR|locus:2028830	255	CAL "CAULIFLOWER" [Arabidopsis	0.655	0.313	0.421	1.9e-10
UNIPROTKB|Q9XJ66	228	MADS22 "MADS-box transcription	0.909	0.486	0.350	2e-10
UNIPROTKB|Q0DEB8	225	MADS5 "MADS-box transcription	0.565	0.306	0.420	2.5e-10
UNIPROTKB|Q10CQ1	246	MADS14 "MADS-box transcription	0.557	0.276	0.4	8.1e-10
UNIPROTKB|D2T2F8	249	grcd4 "GRCD4 protein" [Gerbera	0.549	0.269	0.417	1.9e-09
UNIPROTKB|Q0D4T4	249	MADS18 "MADS-box transcription	0.557	0.273	0.397	2.5e-09

TAIR|locus:2082618 AGL16 "AGAMOUS-like 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 76/124 (61%), Positives = 100/124 (80%)

Query:     1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
             MMGEELSGLSV+ LQNLENQLE+SLRGVRMKKDQ+L++EIQ L+R+GNL+HQEN++L+KK
Sbjct:   110 MMGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKK 169

Query:    61 VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQH--ETPAR 118
             VNL+ Q+NMEL+ KV     +  +N+N L TN + + + S+  V LQLSQPQH  ET ++
Sbjct:   170 VNLMHQQNMELHEKVSEVEGVKIANKNSLLTNGLDMRDTSNEHVHLQLSQPQHDHETHSK 229

Query:   119 ATKL 122
             A +L
Sbjct:   230 AIQL 233

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0008134 "transcription factor binding" evidence=IPI

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0010440 "stomatal lineage progression" evidence=IMP

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2121070 AGL21 "AT4G37940" [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 67/125 (53%), Positives = 90/125 (72%)

Query:     1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
             MMGE+L+GLSV +L +LENQ+E+SLRG+RM+K+Q+L  EIQELS+K NLIHQEN++L +K
Sbjct:   110 MMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRK 169

Query:    61 VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGED-SHIPVRLQLSQPQH---ETP 116
             V  I QEN+ELY K Y       +N N      + + +D SH  +RLQLSQP+H   +TP
Sbjct:   170 VQRIHQENVELYKKAYM------ANTNGFTHREVAVADDESHTQIRLQLSQPEHSDYDTP 223

Query:   117 ARATK 121
              RA +
Sbjct:   224 PRANE 228

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IEA;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0008134 "transcription factor binding" evidence=IPI

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0009691 "cytokinin biosynthetic process" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2066050 AGL17 "AGAMOUS-like 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 65/112 (58%), Positives = 85/112 (75%)

Query:     1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
             + G EL+GLSVK+LQN+E+QLEMSLRG+RMK++QIL +EI+EL+RK NL+H EN+EL +K
Sbjct:   110 LTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRK 169

Query:    61 VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQ 112
             V  I QEN+ELY K YGT + NG   + L    +    +SH  VRLQLSQP+
Sbjct:   170 VQRIHQENVELYKKAYGTSNTNGLGHHEL----VDAVYESHAQVRLQLSQPE 217

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0048578 "positive regulation of long-day photoperiodism, flowering" evidence=IMP

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2042182 AGL44 "AGAMOUS-like 44" [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 54/123 (43%), Positives = 85/123 (69%)

Query:     1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
             ++GEELSG++  DLQNLE+QL  SL+GVR+KKDQ++ +EI+EL+RKG +I +EN EL   
Sbjct:   111 LVGEELSGMNANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNI 170

Query:    61 VNLIRQENMELYTKVYG-TRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQHETPARA 119
             V+++R+EN++L  KV+G T  + G++      + I  G  ++ P +LQL Q Q     ++
Sbjct:   171 VDIMRKENIKLQKKVHGRTNAIEGNSS----VDPISNGTTTYAPPQLQLIQLQPAPREKS 226

Query:   120 TKL 122
              +L
Sbjct:   227 IRL 229

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0007584 "response to nutrient" evidence=IMP

GO:0048527 "lateral root development" evidence=RCA;IMP

GO:0008134 "transcription factor binding" evidence=IPI

GO:0071249 "cellular response to nitrate" evidence=IEP

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0007155 "cell adhesion" evidence=RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0009887 "organ morphogenesis" evidence=RCA

GO:0009888 "tissue development" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0010638 "positive regulation of organelle organization" evidence=RCA

GO:0033044 "regulation of chromosome organization" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

GO:0048589 "developmental growth" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0010167 "response to nitrate" evidence=IMP

TAIR|locus:2028830 CAL "CAULIFLOWER" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 35/83 (42%), Positives = 52/83 (62%)

Query:     2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
             +GEEL  +S+KDLQNLE QLE +L+ +R +K+Q++ + +  L RK   I +EN  L K++
Sbjct:   115 LGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQI 174

Query:    62 NLIRQENMELYTKVYGTRDLNGS 84
                 +EN+ L TK      LN S
Sbjct:   175 K--ERENI-LRTKQTQCEQLNRS 194

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009911 "positive regulation of flower development" evidence=TAS

GO:0010582 "floral meristem determinacy" evidence=IEP

GO:0010048 "vernalization response" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048440 "carpel development" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

UNIPROTKB|Q9XJ66 MADS22 "MADS-box transcription factor 22" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 40/114 (35%), Positives = 61/114 (53%)

Query:     1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
             M GEEL GLS+ +LQ LE  LE  L  V + KDQ  M++I EL RK + + +EN++L  +
Sbjct:   110 MRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQ 169

Query:    61 VNLIRQ-ENMELYTKVYGTRDLNGSN-RNPLHTNNIGIGE-DSHIPVRLQLSQP 111
             V+ I   E   + T+ + T   +  +    LH+ +    + D    V L+L  P
Sbjct:   170 VSQISPAEKQVVDTENFVTEGQSSESVMTALHSGSSQSQDNDDGSDVSLKLGLP 223

GO:0007275 "multicellular organismal development" evidence=IMP

GO:0009908 "flower development" evidence=IMP

GO:0030154 "cell differentiation" evidence=IMP

UNIPROTKB|Q0DEB8 MADS5 "MADS-box transcription factor 5" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 29/69 (42%), Positives = 46/69 (66%)

Query:     1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
             ++GE+L  LS+K+L+ LENQ+E+SL  +R  K+Q L+D++ EL RK   +   N +L +K
Sbjct:   113 LLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRK 172

Query:    61 VNLIRQENM 69
             +     ENM
Sbjct:   173 IQETSGENM 181

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q10CQ1 MADS14 "MADS-box transcription factor 14" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 143 (55.4 bits), Expect = 8.1e-10, P = 8.1e-10
 Identities = 28/70 (40%), Positives = 48/70 (68%)

Query:     1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
             +MGE+L  L++K+LQ LE QLE SL+ +R +K Q++++ I EL RK   + +EN  L K+
Sbjct:   112 LMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKE 171

Query:    61 VNLIRQENME 70
               L+ ++ ++
Sbjct:   172 --LVEKQKVQ 179

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|D2T2F8 grcd4 "GRCD4 protein" [Gerbera hybrid cultivar (taxid:18101)]

 Score = 140 (54.3 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 28/67 (41%), Positives = 46/67 (68%)

Query:     1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
             ++GE+L+ L+ K+L+ LE+QLEMSLR +R  K Q ++D++ +L RK  ++ + N  L KK
Sbjct:   111 LLGEDLAPLNTKELEQLEHQLEMSLRKIRSTKTQSMLDQLADLQRKEQVLAETNKALRKK 170

Query:    61 VNLIRQE 67
             +    QE
Sbjct:   171 LEESAQE 177

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q0D4T4 MADS18 "MADS-box transcription factor 18" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 139 (54.0 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 27/68 (39%), Positives = 46/68 (67%)

Query:     1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
             ++GE+L  L++K+LQ LE+QLE SL+ +R KK+Q+L + I EL +K   +  +N  L K 
Sbjct:   112 LLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKL 171

Query:    61 VNLIRQEN 68
             +   +++N
Sbjct:   172 METEKEKN 179

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	122
pfam01486	100	pfam01486, K-box, K-box region	4e-15

>gnl|CDD|216525 pfam01486, K-box, K-box region

 Score = 65.2 bits (160), Expect = 4e-15
 Identities = 25/61 (40%), Positives = 45/61 (73%)

Query: 1  MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
          ++GE+L  LS+K+LQ LE QLE  L+ +R +K+++L+++I+EL +K   + +EN  L +K
Sbjct: 38 LLGEDLGSLSLKELQQLEQQLENGLKHIRSRKNELLLNQIEELQKKERELQEENRNLRQK 97

Query: 61 V 61
          +
Sbjct: 98 L 98

The K-box region is commonly found associated with SRF-type transcription factors see pfam00319. The K-box is a possible coiled-coil structure. Possible role in multimer formation. Length = 100

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	122
PF01486	100	K-box: K-box region; InterPro: IPR002487 MADS gene	99.73
PF06005	72	DUF904: Protein of unknown function (DUF904); Inte	95.61
COG3074	79	Uncharacterized protein conserved in bacteria [Fun	93.19
smart00338	65	BRLZ basic region leucin zipper.	89.85
PRK15422	79	septal ring assembly protein ZapB; Provisional	89.4
PRK13169	110	DNA replication intiation control protein YabA; Re	89.08
cd07429	108	Cby_like Chibby, a nuclear inhibitor of Wnt/beta-c	88.92
PF06156	107	DUF972: Protein of unknown function (DUF972); Inte	88.27
PF07716	54	bZIP_2: Basic region leucine zipper; InterPro: IPR	85.79
PF01166	59	TSC22: TSC-22/dip/bun family; InterPro: IPR000580	85.5
PF00170	64	bZIP_1: bZIP transcription factor cAMP response el	84.8
KOG0014	195	consensus MADS box transcription factor [Transcrip	84.61
PF06698	59	DUF1192: Protein of unknown function (DUF1192); In	84.48
KOG4797	123	consensus Transcriptional regulator [Transcription	81.42

>PF01486 K-box: K-box region; InterPro: IPR002487 MADS genes in plants encode key developmental regulators of vegetative and reproductive development

Probab=99.73  E-value=1.4e-17  Score=113.03  Aligned_cols=62  Identities=48%  Similarity=0.775  Sum_probs=60.1

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067            1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVN   62 (122)
Q Consensus         1 ~~GedL~~Ls~~eL~~LE~~Le~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~~~   62 (122)
                      ++|+||++||++||..||++|+.||.+||+||+++|.++|+.+++|++.+.++|..|+.+++
T Consensus        38 ~~GedL~~Ls~~eL~~LE~~Le~aL~~VR~rK~~~l~~~i~~l~~ke~~l~~en~~L~~~~~   99 (100)
T PF01486_consen   38 LMGEDLESLSLKELQQLEQQLESALKRVRSRKDQLLMEQIEELKKKERELEEENNQLRQKIE   99 (100)
T ss_pred             cccccccccchHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            58999999999999999999999999999999999999999999999999999999998874

The majority of the plant MADS proteins share a stereotypical MIKC structure. It comprises (from N- to C-terminal) an N-terminal domain, which is, however, present only in a minority of proteins; a MADS domain (see PDOC00302 from PROSITEDOC, IPR002100 from INTERPRO), which is the major determinant of DNA-binding but which also performs dimerisation and accessory factor binding functions; a weakly conserved intervening (I) domain, which constitutes a key molecular determinant for the selective formation of DNA-binding dimers; a keratin-like (K-box) domain, which promotes protein dimerisation; and a C-terminal (C) domain, which is involved in transcriptional activation or in the formation of ternary or quaternary protein complexes. The 80-amino acid K-box domain was originally identified as a region with low but significant similarity to a region of keratin, which is part of the coiled-coil sequence constituting the central rod-shaped domain of keratin [, , ]. The K-box protein-protein interaction domain which mediates heterodimerization of MIKC-type MADS proteins contains several heptad repeats in which the first and the fourth positions are occupied by hydrophobic amino acids suggesting that the K-box domain forms three amphipathic alpha-helices referred to as K1, K2, and K3 [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF06005 DUF904: Protein of unknown function (DUF904); InterPro: IPR009252 Cell division protein ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation

Probab=95.61  E-value=0.24  Score=31.73  Aligned_cols=52  Identities=27%  Similarity=0.435  Sum_probs=39.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067            9 LSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIR   65 (122)
Q Consensus         9 Ls~~eL~~LE~~Le~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~~~~~~   65 (122)
                      ++++-|..||..+..|+..|..     +..+++.++.+...+.++|..|..+.....
T Consensus         1 M~~E~l~~LE~ki~~aveti~~-----Lq~e~eeLke~n~~L~~e~~~L~~en~~L~   52 (72)
T PF06005_consen    1 MSLELLEQLEEKIQQAVETIAL-----LQMENEELKEKNNELKEENEELKEENEQLK   52 (72)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            5789999999999999999975     555667888887777777777776655543

It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.; GO: 0000917 barrier septum formation, 0043093 cytokinesis by binary fission, 0005737 cytoplasm; PDB: 2JEE_A.

>COG3074 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.19  E-value=1.5  Score=28.27  Aligned_cols=52  Identities=23%  Similarity=0.374  Sum_probs=41.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067            9 LSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIR   65 (122)
Q Consensus         9 Ls~~eL~~LE~~Le~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~~~~~~   65 (122)
                      ||++=|..||..+..|+.-|     .++.-+|+++|.|-..|..+-..+....++..
T Consensus         1 MSlEv~ekLE~KiqqAvdTI-----~LLQmEieELKEknn~l~~e~q~~q~~reaL~   52 (79)
T COG3074           1 MSLEVFEKLEAKVQQAIDTI-----TLLQMEIEELKEKNNSLSQEVQNAQHQREALE   52 (79)
T ss_pred             CchHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHH
Confidence            57888999999999999987     46777888999888877777766665555544

>smart00338 BRLZ basic region leucin zipper

Probab=89.85  E-value=3.1  Score=25.42  Aligned_cols=40  Identities=30%  Similarity=0.410  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043067           23 MSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIRQ   66 (122)
Q Consensus        23 ~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~~~~~~~   66 (122)
                      .|..+-|.||...+    ..|..++..|..+|..|..++.....
T Consensus        15 ~aA~~~R~rKk~~~----~~Le~~~~~L~~en~~L~~~~~~l~~   54 (65)
T smart00338       15 EAARRSRERKKAEI----EELERKVEQLEAENERLKKEIERLRR   54 (65)
T ss_pred             HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56778889987766    89999999999999999999877654

>PRK15422 septal ring assembly protein ZapB; Provisional

Probab=89.40  E-value=4.4  Score=26.51  Aligned_cols=43  Identities=28%  Similarity=0.450  Sum_probs=34.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067            9 LSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVE   56 (122)
Q Consensus         9 Ls~~eL~~LE~~Le~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~   56 (122)
                      ||++=|.+||..+..|+.-|-     ++.-+|+.+|.|-..+.+++..
T Consensus         1 MS~EvleqLE~KIqqAvdtI~-----LLqmEieELKekn~~L~~e~~~   43 (79)
T PRK15422          1 MSLEVFEKLEAKVQQAIDTIT-----LLQMEIEELKEKNNSLSQEVQN   43 (79)
T ss_pred             CcHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
Confidence            578889999999999999884     5666778888887777766555

>PRK13169 DNA replication intiation control protein YabA; Reviewed

Probab=89.08  E-value=4.3  Score=28.05  Aligned_cols=48  Identities=25%  Similarity=0.358  Sum_probs=31.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067           11 VKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNL   63 (122)
Q Consensus        11 ~~eL~~LE~~Le~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~~~~   63 (122)
                      |+.|.+||+++..-+..|..-|..+.     .+-..-..|.-||..|+..+..
T Consensus         7 fd~l~~le~~l~~l~~el~~LK~~~~-----el~EEN~~L~iEN~~Lr~~l~~   54 (110)
T PRK13169          7 FDALDDLEQNLGVLLKELGALKKQLA-----ELLEENTALRLENDKLRERLEE   54 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
Confidence            56788999999887777766554433     3444455566666666666654

>cd07429 Cby_like Chibby, a nuclear inhibitor of Wnt/beta-catenin mediated transcription, and similar proteins

Probab=88.92  E-value=0.92  Score=31.36  Aligned_cols=26  Identities=27%  Similarity=0.436  Sum_probs=22.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067           39 EIQELSRKGNLIHQENVELYKKVNLI   64 (122)
Q Consensus        39 ~i~~lkkk~~~l~een~~L~~~~~~~   64 (122)
                      ++..+|||.+.|+|||+.|+-|++..
T Consensus        73 e~~rlkkk~~~LeEENNlLklKievL   98 (108)
T cd07429          73 EVLRLKKKNQQLEEENNLLKLKIEVL   98 (108)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44678899999999999999998765

Chibby(Cby) is a well-conserved nuclear protein that functions as part of the Wnt/beta-catenin signaling pathway. Specifically, Cby binds directly to beta-catenin by interacting with its central region, which harbors armadillo repeats. Cby-beta-catenin interactions may also involve 14-3-3 proteins. By competing with other binding partners of beta-catenin, the Tcf/Lef transcription factors, Cby inhibits transcriptional activation. Cby has been shown to play a role in adipocyte differentiation. The C-terminal region of Cby appears to contain an alpha-helical coiled-coil motif.

>PF06156 DUF972: Protein of unknown function (DUF972); InterPro: IPR010377 FUNCTION: Involved in initiation control of chromosome replication

Probab=88.27  E-value=5.9  Score=27.17  Aligned_cols=47  Identities=28%  Similarity=0.338  Sum_probs=24.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067           11 VKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVN   62 (122)
Q Consensus        11 ~~eL~~LE~~Le~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~~~   62 (122)
                      ++.|..||++|..-+..|..-|.++.     .+-..-..|.-||..|+..+.
T Consensus         7 ~~~l~~le~~l~~l~~~~~~LK~~~~-----~l~EEN~~L~~EN~~Lr~~l~   53 (107)
T PF06156_consen    7 FDRLDQLEQQLGQLLEELEELKKQLQ-----ELLEENARLRIENEHLRERLE   53 (107)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence            46677888888766655555443322     233333334444444444443

SUBUNIT: Interacts with both DnaA and DnaN, acting as a bridge between these two proteins. SIMILARITY: Belongs to the YabA family.

>PF07716 bZIP_2: Basic region leucine zipper; InterPro: IPR011700 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotes are proteins that contain a basic region mediating sequence-specific DNA-binding, followed by a leucine zipper region (see IPR002158 from INTERPRO), which is required for dimerization

Probab=85.79  E-value=5.4  Score=23.58  Aligned_cols=40  Identities=23%  Similarity=0.308  Sum_probs=31.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067           22 EMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIR   65 (122)
Q Consensus        22 e~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~~~~~~   65 (122)
                      -.|..+-|.||-..+    ..+..++..|..+|..|..++..+.
T Consensus        13 r~AA~r~R~rkk~~~----~~le~~~~~L~~en~~L~~~i~~L~   52 (54)
T PF07716_consen   13 REAARRSRQRKKQRE----EELEQEVQELEEENEQLRQEIAQLE   52 (54)
T ss_dssp             HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            356777788885555    7888999999999999988886653

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1NWQ_A 1H89_B 1H88_A 1GTW_B 2E43_A 1IO4_A 1GU4_B 2E42_A 1H8A_B 1GU5_B ....

>PF01166 TSC22: TSC-22/dip/bun family; InterPro: IPR000580 Several eukaryotic proteins are evolutionary related and are thought to be involved in transcriptional regulation

Probab=85.50  E-value=2.5  Score=26.15  Aligned_cols=26  Identities=27%  Similarity=0.474  Sum_probs=16.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067           34 QILMDEIQELSRKGNLIHQENVELYK   59 (122)
Q Consensus        34 ~ll~~~i~~lkkk~~~l~een~~L~~   59 (122)
                      +++.++|..|..+...|+.||..|+.
T Consensus        17 evLK~~I~eL~~~n~~Le~EN~~Lk~   42 (59)
T PF01166_consen   17 EVLKEQIAELEERNSQLEEENNLLKQ   42 (59)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            45566666666666666666666643

These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Proteins containing this signature include: Vertebrate protein TSC-22 [], a transcriptional regulator which seems to act on C-type natriuretic peptide (CNP) promoter. Mammalian protein DIP (DSIP-immunoreactive peptide) [], a protein whose function is not yet known. Drosophila protein bunched [] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis. Caenorhabditis elegans hypothetical protein T18D3.7. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1DIP_B.

>PF00170 bZIP_1: bZIP transcription factor cAMP response element binding (CREB) protein signature fos transforming protein signature jun transcription factor signature; InterPro: IPR011616 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotic are proteins that contain a basic region mediating sequence-specific DNA-binding followed by a leucine zipper region (see IPR002158 from INTERPRO) required for dimerization

Probab=84.80  E-value=6.7  Score=23.84  Aligned_cols=40  Identities=30%  Similarity=0.420  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043067           23 MSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIRQ   66 (122)
Q Consensus        23 ~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~~~~~~~   66 (122)
                      .|-.+.|.||...+    +.|..++..|..+|..|...+.....
T Consensus        15 ~AAr~~R~RKk~~~----~~Le~~~~~L~~en~~L~~~~~~L~~   54 (64)
T PF00170_consen   15 EAARRSRQRKKQYI----EELEEKVEELESENEELKKELEQLKK   54 (64)
T ss_dssp             HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46778899997766    89999999999999999888876653

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2H7H_B 2OQQ_B 1S9K_E 1JNM_A 1JUN_A 1FOS_H 1A02_J 1T2K_C 1CI6_A 1DH3_C ....

>KOG0014 consensus MADS box transcription factor [Transcription]

Probab=84.61  E-value=0.094  Score=38.43  Aligned_cols=40  Identities=43%  Similarity=0.525  Sum_probs=36.9

Q ss_pred             CCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067            2 MGEELSGLSV-KDLQNLENQLEMSLRGVRMKKDQILMDEIQ   41 (122)
Q Consensus         2 ~GedL~~Ls~-~eL~~LE~~Le~~l~~IR~rK~~ll~~~i~   41 (122)
                      +|++|.++++ .+|..+|.+++.++..+|..+...+..++.
T Consensus       137 ~~~~l~~l~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~  177 (195)
T KOG0014|consen  137 TGEDLQSLSSLNELNSLESQLESSLHNSRSSKSKPLSDSNF  177 (195)
T ss_pred             hccccccCCHHHHhcchhhHHHHhhcCCCCCCCcCCcchhh
Confidence            5889999999 999999999999999999999998877775

>PF06698 DUF1192: Protein of unknown function (DUF1192); InterPro: IPR009579 This family consists of several short, hypothetical, bacterial proteins of around 60 residues in length

Probab=84.48  E-value=3.4  Score=25.56  Aligned_cols=29  Identities=34%  Similarity=0.464  Sum_probs=20.6

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 043067            2 MGEELSGLSVKDLQNLENQLEMSLRGVRM   30 (122)
Q Consensus         2 ~GedL~~Ls~~eL~~LE~~Le~~l~~IR~   30 (122)
                      +|+||+.||+.||..==..|+.=+.++|.
T Consensus        14 ig~dLs~lSv~EL~~RIa~L~aEI~R~~~   42 (59)
T PF06698_consen   14 IGEDLSLLSVEELEERIALLEAEIARLEA   42 (59)
T ss_pred             cCCCchhcCHHHHHHHHHHHHHHHHHHHH
Confidence            69999999999987655555554444443

The function of this family is unknown.

>KOG4797 consensus Transcriptional regulator [Transcription]

Probab=81.42  E-value=9.4  Score=26.58  Aligned_cols=44  Identities=16%  Similarity=0.264  Sum_probs=27.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067           17 LENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK   60 (122)
Q Consensus        17 LE~~Le~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~   60 (122)
                      +...+|-|+.-|..-=+--..++++.+|.+++.|.+.|..|..+
T Consensus        46 IDNKIeQAMDLVKtHLmfAVREEVe~Lk~qI~eL~er~~~Le~E   89 (123)
T KOG4797|consen   46 IDNKIEQAMDLVKTHLMFAVREEVEVLKEQIRELEERNSALERE   89 (123)
T ss_pred             echHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44566666666655444444566777777777777666666544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	122
2jee_A	81	YIIU; FTSZ, septum, coiled-coil, cell division, ce	92.09
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	91.75
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	90.58
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	90.49
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	89.52
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	88.95
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	85.91
1dip_A	78	Delta-sleep-inducing peptide immunoreactive peptid	84.02
3nmd_A	72	CGMP dependent protein kinase; leucine zipper, coi	81.02

>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}

Probab=92.09  E-value=1.5  Score=27.93  Aligned_cols=46  Identities=26%  Similarity=0.405  Sum_probs=36.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067            9 LSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYK   59 (122)
Q Consensus         9 Ls~~eL~~LE~~Le~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~   59 (122)
                      +|++=|.+||..+..|+..|     .++..+|+.+|.|-..|.+++..++.
T Consensus         3 MS~ElleqLE~KIq~avdtI-----~lLqmEieELKekN~~L~~e~~e~~~   48 (81)
T 2jee_A            3 MSLEVFEKLEAKVQQAIDTI-----TLLQMEIEELKEKNNSLSQEVQNAQH   48 (81)
T ss_dssp             CCHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            78899999999999999987     45666777888887777666666433

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D

Probab=91.75  E-value=0.92  Score=27.31  Aligned_cols=39  Identities=23%  Similarity=0.256  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067           23 MSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIR   65 (122)
Q Consensus        23 ~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~~~~~~   65 (122)
                      .|..+.|.||...+    ..|..++..|..+|..|..++....
T Consensus        19 eAArrsR~RK~~~~----~~Le~~v~~L~~eN~~L~~ev~~Lr   57 (63)
T 2dgc_A           19 EAARRSRARKLQRM----KQLEDKVEELLSKNYHLENEVARLK   57 (63)
T ss_dssp             HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46788899997666    8999999999999999999887654

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1

Probab=90.58  E-value=1.4  Score=25.72  Aligned_cols=38  Identities=18%  Similarity=0.377  Sum_probs=30.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067           24 SLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIR   65 (122)
Q Consensus        24 ~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~~~~~~   65 (122)
                      |..+-|.||-..+    +.|..++..|..+|..|..++....
T Consensus        12 sA~rSR~RKk~~~----~~LE~~v~~L~~eN~~L~~~~~~L~   49 (55)
T 1dh3_A           12 AARESRRKKKEYV----KSLENRVAVLENQNKTLIEELKALK   49 (55)
T ss_dssp             HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4556688886655    8899999999999999999886654

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1

Probab=90.49  E-value=1.7  Score=25.65  Aligned_cols=41  Identities=27%  Similarity=0.339  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043067           23 MSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIRQE   67 (122)
Q Consensus        23 ~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~~~~~~~~   67 (122)
                      .|..+-|.||...+    +.+..++..+..+|..|..++.....+
T Consensus        11 ~AA~k~R~rKk~~~----~~Le~~~~~L~~~n~~L~~~i~~L~~e   51 (61)
T 1t2k_D           11 AAASRSRQKRKVWV----QSLEKKAEDLSSLNGQLQSEVTLLRNE   51 (61)
T ss_dssp             HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45667788886665    889999999999999999999877643

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A

Probab=89.52  E-value=2.1  Score=25.33  Aligned_cols=40  Identities=23%  Similarity=0.341  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043067           23 MSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIRQ   66 (122)
Q Consensus        23 ~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~~~~~~~   66 (122)
                      .|..+-|.||...+    ..|..++..|..+|..|..++.....
T Consensus        11 ~AA~k~R~rKk~~~----~~Le~~v~~L~~~n~~L~~~v~~L~~   50 (62)
T 1jnm_A           11 IAASKSRKRKLERI----ARLEEKVKTLKAQNSELASTANMLRE   50 (62)
T ss_dssp             HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46778889997666    89999999999999999999977654

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D

Probab=88.95  E-value=2.4  Score=25.22  Aligned_cols=40  Identities=13%  Similarity=0.263  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043067           23 MSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIRQ   66 (122)
Q Consensus        23 ~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~~~~~~~   66 (122)
                      .|..+-|.||...+    ..|..++..|..+|..|..++.....
T Consensus        12 ~AA~rcR~rKk~~~----~~Le~~v~~L~~~n~~L~~ei~~L~~   51 (63)
T 2wt7_A           12 MAAAKCRNRRRELT----DTLQAETDQLEDEKSALQTEIANLLK   51 (63)
T ss_dssp             HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35667788887666    89999999999999999999877653

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1

Probab=85.91  E-value=3.9  Score=24.36  Aligned_cols=41  Identities=17%  Similarity=0.220  Sum_probs=32.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043067           23 MSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNLIRQE   67 (122)
Q Consensus        23 ~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~~~~~~~~   67 (122)
                      .|..+-|.||-.-+    +.+..+...|..+|..|..++...+.+
T Consensus        12 ~AA~R~R~KKk~~~----~~le~~~~~L~~~N~~L~~~i~~L~~E   52 (63)
T 1ci6_A           12 TAATRYRQKKRAEQ----EALTGECKELEKKNEALKERADSLAKE   52 (63)
T ss_dssp             HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46677888885544    889999999999999999998776543

>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1

Probab=84.02  E-value=1.8  Score=27.09  Aligned_cols=26  Identities=35%  Similarity=0.506  Sum_probs=20.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067           34 QILMDEIQELSRKGNLIHQENVELYK   59 (122)
Q Consensus        34 ~ll~~~i~~lkkk~~~l~een~~L~~   59 (122)
                      +++.++|.+|..|...|+.||..|+.
T Consensus        18 evLKe~I~EL~e~~~qLE~EN~~Lk~   43 (78)
T 1dip_A           18 EILKEQIRELVEKNSQLERENTLLKT   43 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46777888888888888888887754

>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}

Probab=81.02  E-value=7.7  Score=24.03  Aligned_cols=45  Identities=18%  Similarity=0.223  Sum_probs=35.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043067           14 LQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVNL   63 (122)
Q Consensus        14 L~~LE~~Le~~l~~IR~rK~~ll~~~i~~lkkk~~~l~een~~L~~~~~~   63 (122)
                      +..|+..|......||.|...     |+.+.+.......+...|+.+++.
T Consensus        21 i~eLq~~L~~K~eELr~kd~~-----I~eLEk~L~ekd~eI~~LqseLDK   65 (72)
T 3nmd_A           21 LRDLQYALQEKIEELRQRDAL-----IDELELELDQKDELIQMLQNELDK   65 (72)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            788899999999999886533     578888888888888888877754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00