Citrus Sinensis ID: 043487

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
Protein Sequence
MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKDFKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEVDYRVYNS
Secondary Structure (PSIPRED)
cccccccccEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHcEEcccccccccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccHEEccccccccHHHHcHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHccEEEccccccccccEEEEEEEEcc
Coil and Loop (DISEMBL)
malkpldwycrpvangvwtKVVDNafgayipcatdsLVVSVSHLILMGLCFYRIWLIKKDFKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGIsaldldgqsglapfevdyrvyns
Flexible Loop (DISEMBL)
MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKDFKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQsglapfevdyrvyns
Low Complexity Region (SEG)
MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKDFKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEVDYRVYNS
Disordered region (IsUnstruct)
****PLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKDFKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEVDYRVY**
Disordered Region (DISOPRED)
*ALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKDFKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEVDYRVYNS
Disordered Region (DISEMBL)
MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKDFKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEVDYRVYNS
Disordered Region (DISPRO)
*ALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKDFKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEVDYRVYNS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKDFKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEVDYRVYNS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	119	2.2.26 [Sep-21-2011]
Q42093	1623	ABC transporter C family	yes	no	0.924	0.067	0.666	2e-36
Q9C8G9	1622	ABC transporter C family	no	no	0.924	0.067	0.639	5e-36
Q9C8H0	1495	ABC transporter C family	no	no	0.941	0.074	0.553	5e-36
Q9C8H1	1495	ABC transporter C family	no	no	0.941	0.074	0.482	7e-29

>sp|Q42093|AB2C_ARATH ABC transporter C family member 2 OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=2

 Score =  150 bits (380), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 74/111 (66%), Positives = 87/111 (78%), Gaps = 1/111 (0%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           M  + ++WYC+PV NGVWTK V NAFGAY PCATDS V+ +S L+L+ LC YRIWL  KD
Sbjct: 1   MGFEFIEWYCKPVPNGVWTKQVANAFGAYTPCATDSFVLGISQLVLLVLCLYRIWLALKD 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFE 111
            KV+RFCL+S+LYNY L  LAAY TA+PLF+LIMGIS LD DG  GL PFE
Sbjct: 61  HKVERFCLRSRLYNYFLALLAAYATAEPLFRLIMGISVLDFDG-PGLPPFE 110

Pump for glutathione S-conjugates. Mediates the transport of S-conjugates such as GSH, S-(2,4-dinitrophenyl)-glutathione (DNP-GS), GSSG, cyanidin 3-glucoside-GS (C3G-GS) and metolachlor-GS (MOC-GS), glucuronides such as 17-beta-estradiol 17-(beta-D-glucuronide) (E(2)17betaG), and of the chlorophyll catabolite such as B.napus nonfluorescent chlorophyll catabolite (Bn-NCC-1).
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 4EC: 4

>sp|Q9C8G9|AB1C_ARATH ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1

 Score =  149 bits (376), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 71/111 (63%), Positives = 87/111 (78%), Gaps = 1/111 (0%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           M  +PLDWYC+PV NGVWTK VD AFGAY PCA DS V+ +SHL+L+ LC YR+WLI KD
Sbjct: 1   MGFEPLDWYCKPVPNGVWTKTVDYAFGAYTPCAIDSFVLGISHLVLLILCLYRLWLITKD 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFE 111
            KV +FCL+SK ++Y L  LAAY TA+PLF+L+M IS LDLDG +G  P+E
Sbjct: 61  HKVDKFCLRSKWFSYFLALLAAYATAEPLFRLVMRISVLDLDG-AGFPPYE 110

Pump for glutathione S-conjugates. Mediates the transport of S-(2,4-dinitrophenyl)-glutathione (DNP-GS), GSSG, cyanidin 3-glucoside-GS (C3G-GS) and metolachlor-GS (MOC-GS).

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 4

EC: 4

>sp|Q9C8H0|AB12C_ARATH ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12 PE=2 SV=1

 Score =  149 bits (376), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 62/112 (55%), Positives = 81/112 (72%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           M  + L+WYC+PVA+G W K VD AFGAY PCA DSLV+ VSH +L+GLCFYRIW+I  +
Sbjct: 1   MGFEALNWYCKPVADGFWEKAVDGAFGAYTPCAIDSLVMLVSHFVLLGLCFYRIWIIFHN 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEV 112
            K Q + L+ K YN +LG LA YC  +P+ +L+MGIS  D+D ++   PFEV
Sbjct: 61  TKAQIYVLRKKYYNCVLGLLACYCVVEPVLRLVMGISLFDMDEETDFPPFEV 112

Pump for glutathione S-conjugates.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 4

EC: 4

>sp|Q9C8H1|AB11C_ARATH ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2

 Score =  125 bits (315), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 54/112 (48%), Positives = 75/112 (66%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           M  + L+WYC+P+A G W K  D AFGAY PCA DSLV+ VS+ +L+GLCFYRIW+   +
Sbjct: 1   MGFEALNWYCKPIAEGFWEKTPDGAFGAYTPCAIDSLVMIVSNSVLLGLCFYRIWITLYN 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEV 112
            K Q + L+   Y+ +L  LA  C  +P+ +L+MGIS  D+  ++ L PFEV
Sbjct: 61  AKAQIYVLRKMYYHCVLWILACCCVVEPVLRLVMGISLFDMGDETDLPPFEV 112

Pump for glutathione S-conjugates.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 4

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	119
225443996	1623	PREDICTED: ABC transporter C family memb	0.941	0.069	0.758	1e-49
359483925	1616	PREDICTED: ABC transporter C family memb	0.932	0.068	0.756	3e-49
356555514	1620	PREDICTED: ABC transporter C family memb	0.941	0.069	0.75	2e-48
147776277	355	hypothetical protein VITISV_018041 [Viti	0.932	0.312	0.765	1e-46
356549118	1620	PREDICTED: ABC transporter C family memb	0.941	0.069	0.723	1e-46
297740801	1500	unnamed protein product [Vitis vinifera]	0.941	0.074	0.705	3e-46
225443998	1624	PREDICTED: ABC transporter C family memb	0.941	0.068	0.696	4e-46
255571322	1626	mgatp-energized glutathione s-conjugate	0.941	0.068	0.687	2e-45
449434234	1631	PREDICTED: ABC transporter C family memb	0.941	0.068	0.705	3e-45
357447229	1712	ABC transporter C family member [Medicag	0.941	0.065	0.687	3e-45

>gi|225443996|ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2 isoform 1 [Vitis vinifera] gi|297740795|emb|CBI30977.3| unnamed protein product [Vitis vinifera]

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 85/112 (75%), Positives = 95/112 (84%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           MA  PL WYCRPV NGVW K+VDNAFG Y PCATD+LV+S+SH IL+ LCFYRIW IKKD
Sbjct: 1   MAFGPLVWYCRPVTNGVWAKLVDNAFGVYTPCATDTLVISISHFILLSLCFYRIWRIKKD 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEV 112
           FKVQRFCL+S  YNYML  LA YCTA+PLF+LIMGIS  +LDGQ+GLAPFEV
Sbjct: 61  FKVQRFCLRSNYYNYMLALLAGYCTAEPLFRLIMGISVFNLDGQAGLAPFEV 112

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483925|ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2 isoform 2 [Vitis vinifera]

 Score =  198 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 84/111 (75%), Positives = 94/111 (84%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           MA  PL WYCRPV NGVW K+VDNAFG Y PCATD+LV+S+SH IL+ LCFYRIW IKKD
Sbjct: 1   MAFGPLVWYCRPVTNGVWAKLVDNAFGVYTPCATDTLVISISHFILLSLCFYRIWRIKKD 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFE 111
           FKVQRFCL+S  YNYML  LA YCTA+PLF+LIMGIS  +LDGQ+GLAPFE
Sbjct: 61  FKVQRFCLRSNYYNYMLALLAGYCTAEPLFRLIMGISVFNLDGQAGLAPFE 111

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555514|ref|XP_003546076.1| PREDICTED: ABC transporter C family member 2-like [Glycine max]

 Score =  196 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 84/112 (75%), Positives = 99/112 (88%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           MA +PL+WYCRPVANGVWTK V+NAFGAY PCA DSLV+SVS+LIL+GLC YRIWLI KD
Sbjct: 1   MAFEPLNWYCRPVANGVWTKSVENAFGAYTPCAVDSLVISVSNLILLGLCIYRIWLIMKD 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEV 112
           F V+RFCL+S LYNY+LG LA YC A+PL++LIMGIS L+LDGQ+ LAPFE+
Sbjct: 61  FTVKRFCLRSNLYNYILGLLALYCVAEPLYRLIMGISVLNLDGQTQLAPFEI 112

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147776277|emb|CAN69720.1| hypothetical protein VITISV_018041 [Vitis vinifera]

 Score =  190 bits (482), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 85/111 (76%), Positives = 95/111 (85%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           MA  PL WYCRPV NGVW K+VDNAFG Y PCATD+LV+S+SHLIL+ LCFYRIW IKKD
Sbjct: 1   MAFGPLVWYCRPVTNGVWAKLVDNAFGVYTPCATDTLVISISHLILLSLCFYRIWRIKKD 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFE 111
           FKVQRFCL+S  YNYML  LA YCTA+PLF+LIMGIS  +LDGQ+GLAPFE
Sbjct: 61  FKVQRFCLRSNYYNYMLALLAGYCTAEPLFRLIMGISVFNLDGQAGLAPFE 111

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549118|ref|XP_003542944.1| PREDICTED: ABC transporter C family member 2-like [Glycine max]

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 81/112 (72%), Positives = 97/112 (86%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           M  +PLDWYCRPVANGVWT+ V+NAFGAY PCA DSLV+SVS+LIL+GLC YRIWLIKKD
Sbjct: 1   MTFEPLDWYCRPVANGVWTRSVENAFGAYTPCAVDSLVISVSNLILLGLCIYRIWLIKKD 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEV 112
           F V+RF L+S LYNY+LG LA YC A+PL++LI+GIS L+LDGQ+  APFE+
Sbjct: 61  FTVKRFHLRSNLYNYILGLLALYCVAEPLYRLILGISVLNLDGQTQFAPFEI 112

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740801|emb|CBI30983.3| unnamed protein product [Vitis vinifera]

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 79/112 (70%), Positives = 94/112 (83%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           MA +PL WYC+PVANGVW K  ++AFG Y PCA DS+VV +SHL+L+GLC YRIWLIK D
Sbjct: 1   MAFEPLVWYCQPVANGVWAKAAESAFGPYTPCAVDSIVVCISHLVLLGLCCYRIWLIKMD 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEV 112
           FKVQRFCL+S  YNYMLG LA YCTA+PLF+L+MG+S  DLD Q+GLAP+EV
Sbjct: 61  FKVQRFCLQSNYYNYMLGLLACYCTAEPLFRLVMGVSIFDLDEQTGLAPYEV 112

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443998|ref|XP_002281070.1| PREDICTED: ABC transporter C family member 2-like [Vitis vinifera]

 Score =  188 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 78/112 (69%), Positives = 94/112 (83%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           MA +PL WYC+PVANGVW K  ++AFG Y PCA DS+VV +SHL+L+GLC YRIWLIK D
Sbjct: 1   MAFEPLVWYCQPVANGVWAKAAESAFGPYTPCAVDSIVVCISHLVLLGLCCYRIWLIKMD 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEV 112
           FKVQRFCL+S  YNYMLG LA YCTA+PLF+L+MG+S  DLD Q+GLAP+E+
Sbjct: 61  FKVQRFCLQSNYYNYMLGLLACYCTAEPLFRLVMGVSIFDLDEQTGLAPYEI 112

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571322|ref|XP_002526610.1| mgatp-energized glutathione s-conjugate pump, putative [Ricinus communis] gi|223534050|gb|EEF35769.1| mgatp-energized glutathione s-conjugate pump, putative [Ricinus communis]

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 77/112 (68%), Positives = 95/112 (84%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           MAL+PLDWYCRPVANGVW K VD+AFGAY PCA DSLV+ +SHL+LMGLCFYRIWLIKK+
Sbjct: 1   MALEPLDWYCRPVANGVWAKEVDSAFGAYTPCAIDSLVICISHLVLMGLCFYRIWLIKKN 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEV 112
            K  ++ L++K YNY+LG L  YCTA+PLF+++M IS  +LDGQ+ LAPFE+
Sbjct: 61  SKAVKYSLRTKYYNYLLGLLVGYCTAEPLFRMVMDISIFNLDGQTNLAPFEM 112

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434234|ref|XP_004134901.1| PREDICTED: ABC transporter C family member 2-like [Cucumis sativus]

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 79/112 (70%), Positives = 91/112 (81%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           MA +P  WYCRPVA+GVWTK V+NA GAY PCA DS+V+ +SHLI++GLC YR WLIK D
Sbjct: 1   MAFEPFVWYCRPVADGVWTKAVENALGAYTPCAIDSVVIVISHLIILGLCLYRTWLIKND 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEV 112
           FK QRFCLKSK+YNYML  LAAYC  +PLF+LI GIS L+LDGQ  L PFEV
Sbjct: 61  FKTQRFCLKSKIYNYMLCLLAAYCVFEPLFRLIRGISVLNLDGQDALPPFEV 112

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357447229|ref|XP_003593890.1| ABC transporter C family member [Medicago truncatula] gi|355482938|gb|AES64141.1| ABC transporter C family member [Medicago truncatula]

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 77/112 (68%), Positives = 95/112 (84%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           MA  PL WYC+PV NGVWT+ V NAFGAY PCA DSLV+ +SHL+++GLC YRIWLI+KD
Sbjct: 1   MAFDPLVWYCQPVENGVWTRTVQNAFGAYTPCAVDSLVIGISHLVILGLCIYRIWLIQKD 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEV 112
           F V+RF L+S +YNY+LG LAAYC A+PL++LIMG+S L+LDGQS LAPFE+
Sbjct: 61  FSVKRFRLRSNVYNYVLGVLAAYCVAEPLYRLIMGVSVLNLDGQSQLAPFEI 112

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	119
TAIR|locus:2061559	1623	ABCC2 "ATP-binding cassette C2	0.924	0.067	0.666	2.2e-36
TAIR|locus:2204202	1622	ABCC1 "ATP-binding cassette C1	0.924	0.067	0.639	4.7e-36
TAIR|locus:2028155	1495	ABCC11 "ATP-binding cassette C	0.941	0.074	0.482	5.5e-26

TAIR|locus:2061559 ABCC2 "ATP-binding cassette C2" [Arabidopsis thaliana (taxid:3702)]

 Score = 406 (148.0 bits), Expect = 2.2e-36, P = 2.2e-36
 Identities = 74/111 (66%), Positives = 87/111 (78%)

Query:     1 MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
             M  + ++WYC+PV NGVWTK V NAFGAY PCATDS V+ +S L+L+ LC YRIWL  KD
Sbjct:     1 MGFEFIEWYCKPVPNGVWTKQVANAFGAYTPCATDSFVLGISQLVLLVLCLYRIWLALKD 60

Query:    61 FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFE 111
              KV+RFCL+S+LYNY L  LAAY TA+PLF+LIMGIS LD DG  GL PFE
Sbjct:    61 HKVERFCLRSRLYNYFLALLAAYATAEPLFRLIMGISVLDFDGP-GLPPFE 110

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA;ISS;IDA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0000325 "plant-type vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2204202 ABCC1 "ATP-binding cassette C1" [Arabidopsis thaliana (taxid:3702)]

 Score = 403 (146.9 bits), Expect = 4.7e-36, P = 4.7e-36
 Identities = 71/111 (63%), Positives = 87/111 (78%)

Query:     1 MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
             M  +PLDWYC+PV NGVWTK VD AFGAY PCA DS V+ +SHL+L+ LC YR+WLI KD
Sbjct:     1 MGFEPLDWYCKPVPNGVWTKTVDYAFGAYTPCAIDSFVLGISHLVLLILCLYRLWLITKD 60

Query:    61 FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFE 111
              KV +FCL+SK ++Y L  LAAY TA+PLF+L+M IS LDLDG +G  P+E
Sbjct:    61 HKVDKFCLRSKWFSYFLALLAAYATAEPLFRLVMRISVLDLDG-AGFPPYE 110

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA;ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0000325 "plant-type vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0015446 "arsenite-transmembrane transporting ATPase activity" evidence=IDA

GO:0015700 "arsenite transport" evidence=IDA

GO:0046685 "response to arsenic-containing substance" evidence=IMP

GO:0071992 "phytochelatin transmembrane transporter activity" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0008559 "xenobiotic-transporting ATPase activity" evidence=IMP

TAIR|locus:2028155 ABCC11 "ATP-binding cassette C11" [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 5.5e-26, P = 5.5e-26
 Identities = 54/112 (48%), Positives = 75/112 (66%)

Query:     1 MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
             M  + L+WYC+P+A G W K  D AFGAY PCA DSLV+ VS+ +L+GLCFYRIW+   +
Sbjct:     1 MGFEALNWYCKPIAEGFWEKTPDGAFGAYTPCAIDSLVMIVSNSVLLGLCFYRIWITLYN 60

Query:    61 FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEV 112
              K Q + L+   Y+ +L  LA  C  +P+ +L+MGIS  D+  ++ L PFEV
Sbjct:    61 AKAQIYVLRKMYYHCVLWILACCCVVEPVLRLVMGISLFDMGDETDLPPFEV 112


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.143   0.470    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      119       119   0.00091  102 3  11 22  0.40    30
                                                     29  0.47    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  568 (60 KB)
  Total size of DFA:  138 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.38u 0.14s 10.52t   Elapsed:  00:00:00
  Total cpu time:  10.38u 0.14s 10.52t   Elapsed:  00:00:00
  Start:  Fri May 10 05:14:14 2013   End:  Fri May 10 05:14:14 2013

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA;ISS

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00028387001 SubName- Full=Chromosome chr10 scaffold_43, whole genome shotgun sequence; (416 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	119
PLN03130	1622	PLN03130, PLN03130, ABC transporter C family membe	1e-66
PLN03232	1495	PLN03232, PLN03232, ABC transporter C family membe	6e-48

>gnl|CDD|215595 PLN03130, PLN03130, ABC transporter C family member; Provisional

 Score =  216 bits (553), Expect = 1e-66
 Identities = 84/112 (75%), Positives = 97/112 (86%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           M  +PLDWYCRPV NGVW K VDNAFGAY PCATDSLV+++SHL+L+GLC YRIWLIKKD
Sbjct: 1   MGFEPLDWYCRPVPNGVWAKKVDNAFGAYTPCATDSLVINISHLVLLGLCLYRIWLIKKD 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEV 112
            KVQRFCL+SK YNY L  LAAYCTA+PLF+L+MGIS L+LDGQ+ L PFE+
Sbjct: 61  HKVQRFCLRSKWYNYFLALLAAYCTAEPLFRLVMGISVLNLDGQTSLPPFEI 112

Length = 1622

>gnl|CDD|215640 PLN03232, PLN03232, ABC transporter C family member; Provisional

 Score =  163 bits (413), Expect = 6e-48
 Identities = 62/112 (55%), Positives = 81/112 (72%)

Query: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
           M  + L+WYC+P+A G W K VD AFGAY PCA DSLV+ VSH +L+GLCFYRIW+I  +
Sbjct: 1   MGFEALNWYCKPIAEGFWEKTVDGAFGAYTPCAIDSLVMIVSHSVLLGLCFYRIWIILDN 60

Query: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEV 112
            K Q + L+ K YN +LG LA YC  +P+ +L+MGIS  D+D ++ L PFEV
Sbjct: 61  AKAQIYVLRKKYYNCVLGILACYCVVEPVLRLVMGISLFDMDEETDLPPFEV 112

Length = 1495

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	119
PLN03130	1622	ABC transporter C family member; Provisional	99.88
PLN03232	1495	ABC transporter C family member; Provisional	99.73

>PLN03130 ABC transporter C family member; Provisional

Probab=99.88  E-value=3.4e-23  Score=195.23  Aligned_cols=114  Identities=74%  Similarity=1.400  Sum_probs=111.1

Q ss_pred             CCCCcccccccccCCCcchhccccccccccccccchhhhhHHHHHHHHHHHHhhhhhhcCCeeeeEEeeccchhhHHHHH
Q 043487            1 MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKDFKVQRFCLKSKLYNYMLGFL   80 (119)
Q Consensus         1 Mg~~~l~wyCrPv~~GvW~k~v~~aFGAyTPC~~DslVI~iS~lvLl~lc~yRIw~i~~~~~~qrf~lrs~~y~y~l~lL   80 (119)
                      |||||++|||+|.++|+|++.++++||+||||..|++++++++++|+++|.+|||.++++.+.++++.+.+++++.++++
T Consensus         1 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (1622)
T PLN03130          1 MGFEPLDWYCRPVPNGVWAKKVDNAFGAYTPCATDSLVINISHLVLLGLCLYRIWLIKKDHKVQRFCLRSKWYNYFLALL   80 (1622)
T ss_pred             CcchhhhhhcCCCccCCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHhccccccCCccccchHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhhHHHHHhhhceecCCCCCCCCCeeEEE
Q 043487           81 AAYCTAKPLFQLIMGISALDLDGQSGLAPFEVDY  114 (119)
Q Consensus        81 A~yC~~ePL~rl~~giS~~Nldgqt~laPfEi~~  114 (119)
                      .++|+++|+++.++++|++|+|++++.+|+|+..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (1622)
T PLN03130         81 AAYCTAEPLFRLVMGISVLNLDGQTSLPPFEIVS  114 (1622)
T ss_pred             HHHHHHHHHHHHHHHhhhhccccccccccchhHH
Confidence            9999999999999999999999999999999763

>PLN03232 ABC transporter C family member; Provisional

Probab=99.73  E-value=3.3e-18  Score=159.96  Aligned_cols=113  Identities=55%  Similarity=1.151  Sum_probs=105.8

Q ss_pred             CCCCcccccccccCCCcchhccccccccccccccchhhhhHHHHHHHHHHHHhhhhhhcCCeeeeEEeeccchhhHHHHH
Q 043487            1 MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKDFKVQRFCLKSKLYNYMLGFL   80 (119)
Q Consensus         1 Mg~~~l~wyCrPv~~GvW~k~v~~aFGAyTPC~~DslVI~iS~lvLl~lc~yRIw~i~~~~~~qrf~lrs~~y~y~l~lL   80 (119)
                      ||||.|.++|+|.++|+|.+.++++|++||||..|+++++++++.|+++|.+|+|.+.+..+.++++.+..++++.++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (1495)
T PLN03232          1 MGFEALNWYCKPIAEGFWEKTVDGAFGAYTPCAIDSLVMIVSHSVLLGLCFYRIWIILDNAKAQIYVLRKKYYNCVLGIL   80 (1495)
T ss_pred             CchhHHHhhcCCccccCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHHhhccccCCccccchHHHHHHHHH
Confidence            99999999999998679999999999999999999999999999999999999999964447888888899999999999


Q ss_pred             HHhhhhhhHHHHHhhhceecCCCCCCCCCeeEE
Q 043487           81 AAYCTAKPLFQLIMGISALDLDGQSGLAPFEVD  113 (119)
Q Consensus        81 A~yC~~ePL~rl~~giS~~Nldgqt~laPfEi~  113 (119)
                      ..+|+.+++++.++++|++|+|+++..+|+|+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (1495)
T PLN03232         81 ACYCVVEPVLRLVMGISLFDMDEETDLPPFEVA  113 (1495)
T ss_pred             HHHHHHHHHHHHHHHhhhhccccccccccchhH
Confidence            999999999999999999999999888888876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00