Citrus Sinensis ID: 043575

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
Protein Sequence
MAGIAIILDLWRKNPSFCSPHTALHSSGLLSATAAAASAAAAAPFASRFLFGSPKIPVAYCDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSLRSFLMFYLPLLEPDMSTEDDDDDFPQDSPEQRRLDLVVPFKKSVKQIVRETTVVTTRRILERLAVHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQIGIEIYRYFNRIMNSKEEDSDGVNKAKEAKVLGKKVTGITIRCGASLVFASIGAGIGATTVRPSIGQWIGCAVGDLAGPIVVSFCLDRALHLDL
Secondary Structure (PSIPRED)
cccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccEEEcccccccccccccccccccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccEEEEccccccccccHHHHHHccHHHHHcccccccccEcccccccHHHHcHHHHHHHHHHHHHHHHHcHHccccccccccccccHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEccccccEEEEHHHHccccEEEEEEEHHHHHccc
Coil and Loop (DISEMBL)
MAGIAIILDLwrknpsfcsphtalhssgLLSATAAAASAAAaapfasrflfgspkipvaycdagaaitedyipnfgkvpgsifqhdaIKYTTKEYNIELKPLFSAFELRALAMTSLRSFLMFYlpllepdmstedddddfpqdspeqrrldlvvpfKKSVKQIVRETTVVTTRRILERLAVHYVSQRMAWKLLKDVpksatrkaqrglpttVYFFRVSRTTLRGHFLGVAASWIVQIGIEIYRYFNRImnskeedsdgvnkAKEAKVLGKKVTGITIRCGASLVFASIgagigattvrpsigqwigcavgdlagPIVVSFCLdralhldl
Flexible Loop (DISEMBL)
MAGIAIILDLWRKNPSFCSPHTALHSSGLLSATAAAASAAAAAPFASRFLFGSPKIPVAYCDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSLRSFLMFYLPLLEPDMSTEDDDDDFPQDspeqrrldlvvpfkksvkqivrettvvttrrILERLAVHYVSQRMAWKLLkdvpksatrkaqrglpttvYFFRVSRTTLRGHFLGVAASWIVQIGIEIYRYFNRIMNSkeedsdgvnkAKEAKVLGKKVTGITIRCGASLVFASIGAGIGATTVRPSIGQWIGCAVGDLAGPIVVSFCLDRALHLDL
Low Complexity Region (SEG)
MAGIAIILDLWRKNPSFCSPHTalhssgllsataaaasaaaaapfasRFLFGSPKIPVAYCDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSLRSFLMFYLPLLEPDMSTEdddddFPQDSPEQRRLDLVVPFKKSVKQivrettvvttrrilerlAVHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQIGIEIYRYFNRIMNSKEEDSDGVNKAKEAKVLGKKVTGITIRCGASLVFASIGAGIGATTVRPSIGQWIGCAVGDLAGPIVVSFCLDRALHLDL
Disordered region (IsUnstruct)
***IAIILDLWRKNPSFCSPHTALHSSGLLSATAAAASAAAAAPFASRFLFGSPKIPVAYCDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSLRSFLMFYLPLL**********************LDLVVPFKKSVKQIVRETTVVTTRRILERLAVHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQIGIEIYRYFNRIM****************KVLGKKVTGITIRCGASLVFASIGAGIGATTVRPSIGQWIGCAVGDLAGPIVVSFCLDRALH***
Disordered Region (DISOPRED)
*AGIAIILDLWRK****************LSATAAAASAAAAAPFASRFLFGSPKIPVAYCDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSLRSFLMFYLPLLEP******************RRLDLVVPFKKSVKQIVRETTVVTTRRILERLAVHYVSQRMAWKLLKDVP*********GLPTTVYFFRVSRTTLRGHFLGVAASWIVQIGIEIYRY**********************VLGKKVTGITIRCGASLVFASIGAGIGATTVRPSIGQWIGCAVGDLAGPIVVSFCLDRALHLDL
Disordered Region (DISEMBL)
MAGIAIILDLWRKNPSFCSPHTALHSSGLLSA**********APFASRFLFGSPKIPVAYCDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSLRSFLMFYLPLLEPDMS***********SPEQRRLDLVVPFKKSVKQIVRETTVVTTRRILERLAVHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQIGIEIYRYFNRIMNSK*********AKEAKVLGKKVTGITIRCGASLVFASIGAGIGATTVRPSIGQWIGCAVGDLAGPIVVSFCLDRALHLDL
Disordered Region (DISPRO)
*AGIAIILDLWRKNPS**************************APFASRFLFGSPKIPVAYCDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSLRSFLMFYLPLLEPD*************SPEQRRLDLVVPFKKSVKQIVRETTVVTTRRILERLAVHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQIGIEIYRYFNRIMNSK****DGVNKAKEAKVLGKKVTGITIRCGASLVFASIGAGIGATTVRPSIGQWIGCAVGDLAGPIVVSFCLDRALHLDL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGIAIILDLWRKNPSFCSPHTALHSSGLLSATAAAASAAAAAPFASRFLFGSPKIPVAYCDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSLRSFLMFYLPLLEPDMSTEDDDDDFPQDSPEQRRLDLVVPFKKSVKQIVRETTVVTTRRILERLAVHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQIGIEIYRYFNRIMNSKEEDSDGVNKAKEAKVLGKKVTGITIRCGASLVFASIGAGIGATTVRPSIGQWIGCAVGDLAGPIVVSFCLDRALHLDL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	330
225461876	332	PREDICTED: uncharacterized protein LOC10	0.993	0.987	0.712	1e-129
147792925	332	hypothetical protein VITISV_014078 [Viti	0.993	0.987	0.709	1e-129
255563532	323	conserved hypothetical protein [Ricinus	0.978	1.0	0.7	1e-128
118485192	323	unknown [Populus trichocarpa]	0.975	0.996	0.706	1e-126
449465158	324	PREDICTED: uncharacterized protein LOC10	0.978	0.996	0.643	1e-114
357475385	326	hypothetical protein MTR_4g086170 [Medic	0.975	0.987	0.625	1e-111
388506236	326	unknown [Medicago truncatula]	0.975	0.987	0.622	1e-111
388502582	326	unknown [Lotus japonicus]	0.981	0.993	0.626	1e-109
388505284	326	unknown [Lotus japonicus]	0.981	0.993	0.626	1e-109
359806019	327	uncharacterized protein LOC100807129 [Gl	0.954	0.963	0.608	1e-109

>gi|225461876|ref|XP_002265352.1| PREDICTED: uncharacterized protein LOC100241265 [Vitis vinifera] gi|296089892|emb|CBI39711.3| unnamed protein product [Vitis vinifera]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 238/334 (71%), Positives = 277/334 (82%), Gaps = 6/334 (1%)

Query: 1   MAGIAIILDLWRKNPSFCSPHTALHSSG----LLSATAAAASAAAAAPFASRFLFGSPKI 56
           MAGIAI+LDLWRKNPSF S  T LHS G      +A+AAAAS AAA PFASRFLFG+  I
Sbjct: 1   MAGIAILLDLWRKNPSFFSGQT-LHSYGSFSATAAASAAAASVAAATPFASRFLFGNAGI 59

Query: 57  PVAYCDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSL 116
            VA CDAGA  ++DYI        +IFQ+D++KY+TKEY IELKPLFSAF  ++LAMTSL
Sbjct: 60  SVAQCDAGATWSDDYISKLRSASANIFQNDSLKYSTKEYYIELKPLFSAFGAKSLAMTSL 119

Query: 117 RSFLMFYLPLLEPDMSTEDDDDDFPQDSPEQRRLDLVVPFKKSVKQIVRETTVVTTRRIL 176
           RSFLMFYLPLLEP  + EDDD+DF Q++PE+  +DLVVPFKKSVKQI+RETTVVTTRR+L
Sbjct: 120 RSFLMFYLPLLEPHTNMEDDDEDFLQETPEESHVDLVVPFKKSVKQIMRETTVVTTRRVL 179

Query: 177 ERLAVHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQ 236
           ERLAV Y SQRMAWKLLKDVPKSA RKA RG+PT VYFFR+SRTT RGHFLGVAASW+VQ
Sbjct: 180 ERLAVTYFSQRMAWKLLKDVPKSAVRKADRGMPTLVYFFRISRTTFRGHFLGVAASWLVQ 239

Query: 237 IGIEIYRYFNRIMNSKEEDSDGVNKAKEAKVLGKKVTGITIRCGASLVFASIGAGIGATT 296
           +GIEIYR+F+ ++NS EE+ D  +KA+ AK+LGKKVT  T++CGASLVFASIGAGIGAT 
Sbjct: 240 VGIEIYRFFSWMINS-EEEIDRADKAQRAKLLGKKVTCTTVKCGASLVFASIGAGIGATL 298

Query: 297 VRPSIGQWIGCAVGDLAGPIVVSFCLDRALHLDL 330
            RPS GQWIGCA GDLAGPI+VS C ++ LH+DL
Sbjct: 299 FRPSAGQWIGCAAGDLAGPIIVSVCFEKVLHVDL 332

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147792925|emb|CAN73197.1| hypothetical protein VITISV_014078 [Vitis vinifera]

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/334 (70%), Positives = 277/334 (82%), Gaps = 6/334 (1%)

Query: 1   MAGIAIILDLWRKNPSFCSPHTALHSSG----LLSATAAAASAAAAAPFASRFLFGSPKI 56
           MAGIAI+LDLWRKNPSF S  T LHS G      +A+AAAAS AAA PFASRFLFG+  I
Sbjct: 1   MAGIAILLDLWRKNPSFFSGQT-LHSYGSFSATAAASAAAASVAAATPFASRFLFGNAGI 59

Query: 57  PVAYCDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSL 116
            VA CDAGA  ++DYI        +IFQ+D++KY+TKEY IELKPLFSAF  ++LAMTSL
Sbjct: 60  SVAQCDAGATWSDDYISKLRSASANIFQNDSLKYSTKEYYIELKPLFSAFGAKSLAMTSL 119

Query: 117 RSFLMFYLPLLEPDMSTEDDDDDFPQDSPEQRRLDLVVPFKKSVKQIVRETTVVTTRRIL 176
           RSFLMFYLPLLEP  + EDDD+DF Q++PE+  +DLVVPFKKSVKQI+RETTVVTTRR+L
Sbjct: 120 RSFLMFYLPLLEPHTNMEDDDEDFLQETPEESHVDLVVPFKKSVKQIMRETTVVTTRRVL 179

Query: 177 ERLAVHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQ 236
           ERLAV Y SQRMAWKLLKDVPKSA RKA RG+PT VYF+R+SRTT RGHFLGVAASW+VQ
Sbjct: 180 ERLAVTYFSQRMAWKLLKDVPKSAVRKADRGMPTLVYFYRISRTTFRGHFLGVAASWLVQ 239

Query: 237 IGIEIYRYFNRIMNSKEEDSDGVNKAKEAKVLGKKVTGITIRCGASLVFASIGAGIGATT 296
           +GIEIYR+F+ ++NS EE+ D  +KA+ AK+LGKKVT  T++CGASLVFASIGAGIGAT 
Sbjct: 240 VGIEIYRFFSWMINS-EEEIDRADKAQRAKLLGKKVTCTTVKCGASLVFASIGAGIGATL 298

Query: 297 VRPSIGQWIGCAVGDLAGPIVVSFCLDRALHLDL 330
            RPS GQWIGCA GDLAGPI+VS C ++ LH+DL
Sbjct: 299 FRPSAGQWIGCAAGDLAGPIIVSVCFEKVLHVDL 332

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563532|ref|XP_002522768.1| conserved hypothetical protein [Ricinus communis] gi|223538006|gb|EEF39619.1| conserved hypothetical protein [Ricinus communis]

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/330 (70%), Positives = 274/330 (83%), Gaps = 7/330 (2%)

Query: 1   MAGIAIILDLWRKNPSFCSPHTALHSSGLLSATAAAASAAAAAPFASRFLFGSPKIPVAY 60
           MAGIAI+LDL +KNP+F SP     S+    + AAA+ AAA  PFASRFLFG   IPVA+
Sbjct: 1   MAGIAIVLDLLKKNPNFYSPK---FSASSAVSVAAASVAAAGTPFASRFLFG---IPVAH 54

Query: 61  CDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSLRSFL 120
           CDAGA +++DYI N  K  G IFQHD++KYTTKEY  ELKPL SAFE + LA+TSLRSFL
Sbjct: 55  CDAGATLSDDYISNIRKASGDIFQHDSLKYTTKEYYFELKPLLSAFEWKQLAITSLRSFL 114

Query: 121 MFYLPLLEPDMSTEDDDDDFPQDSPEQRRLDLVVPFKKSVKQIVRETTVVTTRRILERLA 180
           +FYLPLLEP  + E+DD+DF QD PE RR+DLVVPF+KSVKQIVRETTVVTTRRILERLA
Sbjct: 115 LFYLPLLEPVSNAEEDDEDFLQDVPEDRRVDLVVPFQKSVKQIVRETTVVTTRRILERLA 174

Query: 181 VHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQIGIE 240
           VHYVSQRMAWKLLKDVPKSA RKA RG+P  VY F+V RTT RGHFLGVAASW VQ+GIE
Sbjct: 175 VHYVSQRMAWKLLKDVPKSAVRKADRGMPAIVYMFKVGRTTFRGHFLGVAASWFVQVGIE 234

Query: 241 IYRYFNRIMNSKEEDSDGVNKAKEAKVLGKKVTGITIRCGASLVFASIGAGIGATTVRPS 300
           IYR+F+R+  S E++S+  +KA++ K+LGKKVTG+T+RC ASLVFASIGAG+GA  +RPS
Sbjct: 235 IYRFFSRLTRS-EDESNNHDKAEQVKILGKKVTGVTLRCSASLVFASIGAGLGAALIRPS 293

Query: 301 IGQWIGCAVGDLAGPIVVSFCLDRALHLDL 330
            GQWIGCA+GDL+GP+VV+FCL++ LH DL
Sbjct: 294 AGQWIGCALGDLSGPVVVTFCLEKVLHNDL 323

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118485192|gb|ABK94457.1| unknown [Populus trichocarpa]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/331 (70%), Positives = 276/331 (83%), Gaps = 9/331 (2%)

Query: 1   MAGIAIILDLW-RKNPSFCSPHTALHSSGLLSATAAAASAAAAAPFASRFLFGSPKIPVA 59
           MAGIAI+LDL  RKNPS    H         ++ AAA+ AA+AAPFASRFLFG P IPVA
Sbjct: 1   MAGIAIVLDLLSRKNPSSYPTH-------FSASAAAASIAASAAPFASRFLFGQPMIPVA 53

Query: 60  YCDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSLRSF 119
           YCDAGAA++ DYI +  +    IFQ  ++KYTTKEY IELKPLFSAFE + LAMTSLRSF
Sbjct: 54  YCDAGAALSGDYISSIRRASADIFQKGSLKYTTKEYYIELKPLFSAFEWKQLAMTSLRSF 113

Query: 120 LMFYLPLLEPDMSTEDDDDDFPQDSPEQRRLDLVVPFKKSVKQIVRETTVVTTRRILERL 179
           LMFYLPLLEP  +TE+DDDDF QD+ E +R+DLVVPF+KSVKQI+RETTVVTTRRILERL
Sbjct: 114 LMFYLPLLEPSTNTEEDDDDFLQDAHEVQRVDLVVPFQKSVKQIIRETTVVTTRRILERL 173

Query: 180 AVHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQIGI 239
           AVH++SQRMAWKLLKDVPKSA RKA+RG+PT VYFFRV R+T RGHFLGVAASW+VQ+GI
Sbjct: 174 AVHHISQRMAWKLLKDVPKSAIRKAERGMPTMVYFFRVCRSTFRGHFLGVAASWLVQVGI 233

Query: 240 EIYRYFNRIMNSKEEDSDGVNKAKEAKVLGKKVTGITIRCGASLVFASIGAGIGATTVRP 299
           EIYR+F+ +   +EE +D V+K+++ K+LGKKVTG+TIRCGASLVFASIGAG+GAT  RP
Sbjct: 234 EIYRFFSHLTKPEEESND-VDKSEQVKILGKKVTGVTIRCGASLVFASIGAGVGATLFRP 292

Query: 300 SIGQWIGCAVGDLAGPIVVSFCLDRALHLDL 330
           S GQWIGC +GDLAGP+VVS CL++ LH DL
Sbjct: 293 SRGQWIGCVLGDLAGPVVVSICLEKVLHTDL 323

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465158|ref|XP_004150295.1| PREDICTED: uncharacterized protein LOC101207862 [Cucumis sativus] gi|449510527|ref|XP_004163690.1| PREDICTED: uncharacterized LOC101207862 [Cucumis sativus]

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/331 (64%), Positives = 254/331 (76%), Gaps = 8/331 (2%)

Query: 1   MAGIAIILDLWRKNPSFCSPHTALHSSGLLSATAAAASAAAAAPFASRFLFGSPKIPVAY 60
           MAG+AI+LDL RKN S   P  +LHS G  SA AAAA    A     R   G+ +IPVA+
Sbjct: 1   MAGLAIVLDLLRKN-SGTKPPQSLHSYGAFSAAAAAAGTPFAF----RAFLGNYRIPVAH 55

Query: 61  CDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSLRSFL 120
           CDAG  +TEDY  N       IF+H++++YTTKEYN+ELKPLFSAF+ R L MT+LRSFL
Sbjct: 56  CDAGVDVTEDYFSNLQSASRRIFEHESLQYTTKEYNLELKPLFSAFQWRMLGMTTLRSFL 115

Query: 121 MFYLPLLEPDMSTEDDDD-DFPQDSPEQRRLDLVVPFKKSVKQIVRETTVVTTRRILERL 179
           MFYLPLLEP    ED+DD DF  D+ E++ +DLV PFKKS+KQIVRETTVVTTRRILER+
Sbjct: 116 MFYLPLLEPHAKLEDEDDEDFLNDNQEEQHVDLVSPFKKSIKQIVRETTVVTTRRILERI 175

Query: 180 AVHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQIGI 239
           +VHY SQR+AWKLLKDVPKSA RKA R LPT VYFFRV+RTT RGH LGVAASW+VQ+GI
Sbjct: 176 SVHYASQRIAWKLLKDVPKSAVRKAGRELPTLVYFFRVTRTTFRGHALGVAASWLVQVGI 235

Query: 240 EIYRYFNRIMNSKEEDSDGVNKAKEAKVLGKKVTGITIRCGASLVFASIGAGIGATTVRP 299
           EIYRY +     K +D D V++  +  +L KK+ G T+RC ASLVFASIGAGIGAT  RP
Sbjct: 236 EIYRYVS--AKVKPKDDDVVDETDKVIILRKKIAGATLRCSASLVFASIGAGIGATLFRP 293

Query: 300 SIGQWIGCAVGDLAGPIVVSFCLDRALHLDL 330
           S GQWIGCAVGDLAGP++V+ CL++ L+LDL
Sbjct: 294 SAGQWIGCAVGDLAGPVIVTICLEKGLNLDL 324

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475385|ref|XP_003607978.1| hypothetical protein MTR_4g086170 [Medicago truncatula] gi|355509033|gb|AES90175.1| hypothetical protein MTR_4g086170 [Medicago truncatula]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/334 (62%), Positives = 255/334 (76%), Gaps = 12/334 (3%)

Query: 1   MAGIAIILDLWRKNPSFCSPHTALHSSGLLSATAAAASAAAAAPFASRFLFGSPKIPVAY 60
           MAGIAI++DLWRKN +         S+   +A AAAAS AA   FASR  FG   IPVAY
Sbjct: 1   MAGIAILVDLWRKNHN----SAFQSSASSSAAVAAAASFAAGTTFASRAFFG---IPVAY 53

Query: 61  CDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSLRSFL 120
           CDAGA ++ED I         I+ +DA +++TK YN++ KPLFSAFELR+LAMTS+RSFL
Sbjct: 54  CDAGATVSEDLISTIQSASERIYNYDAERFSTKTYNVQPKPLFSAFELRSLAMTSIRSFL 113

Query: 121 MFYLPLLEPDMSTEDDDDDFPQDSPEQRRLDLVVPFKKSVKQIVRETTVVTTRRILERLA 180
           M YLPLLEP    ED DD F ++ PE R +DLVVPFKKSVKQI+RET+VVTTRRILER+A
Sbjct: 114 MHYLPLLEPRAEIEDLDDLFEEEQPEHR-VDLVVPFKKSVKQIIRETSVVTTRRILERIA 172

Query: 181 VHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQIGIE 240
           VHYVS+RMAWKLLKDVP+SATRKA R +P+ VYFF V RTT RGH LGVAASW+VQ+G+E
Sbjct: 173 VHYVSERMAWKLLKDVPRSATRKAARNMPSYVYFFSVGRTTFRGHMLGVAASWVVQVGME 232

Query: 241 IYRYFNRIMNSKEEDSD----GVNKAKEAKVLGKKVTGITIRCGASLVFASIGAGIGATT 296
           +YR+F  I N+ +EDS+      +  K+ ++LG+KV   +IRCG+SLVFASIGAGIGAT 
Sbjct: 233 LYRFFRSIFNANDEDSNVDTTKQDTTKQVQLLGQKVALTSIRCGSSLVFASIGAGIGATL 292

Query: 297 VRPSIGQWIGCAVGDLAGPIVVSFCLDRALHLDL 330
           VRPS+GQWIGCA GDL GPI+V+FC D+A  + L
Sbjct: 293 VRPSLGQWIGCAAGDLVGPIIVAFCADKAFQVAL 326

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506236|gb|AFK41184.1| unknown [Medicago truncatula]

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 208/334 (62%), Positives = 253/334 (75%), Gaps = 12/334 (3%)

Query: 1   MAGIAIILDLWRKNPSFCSPHTALHSSGLLSATAAAASAAAAAPFASRFLFGSPKIPVAY 60
           MAGIAI++DLWRKN +         S+   +A AAAAS AA   FASR  FG   IPVAY
Sbjct: 1   MAGIAILVDLWRKNHN----SAFQSSASSSAAVAAAASFAAGTTFASRAFFG---IPVAY 53

Query: 61  CDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSLRSFL 120
           CDAGA ++ED I         I+ +DA ++ TK YN++ KPLFSAFELR+LAMTS+RSFL
Sbjct: 54  CDAGATVSEDLISTIQSASERIYNYDAERFNTKTYNVQPKPLFSAFELRSLAMTSIRSFL 113

Query: 121 MFYLPLLEPDMSTEDDDDDFPQDSPEQRRLDLVVPFKKSVKQIVRETTVVTTRRILERLA 180
           M YLPLLEP    ED DD F ++ PE R +DLVVPFKKSVKQI+RET+VVTTRRILER+ 
Sbjct: 114 MHYLPLLEPRAQIEDLDDLFEEEQPEHR-VDLVVPFKKSVKQIIRETSVVTTRRILERIT 172

Query: 181 VHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQIGIE 240
           VHYVS+RMAWKLLKDVP+SATRKA R +P+ VYFF V RTT RGH LGVAASW+VQ+G+E
Sbjct: 173 VHYVSERMAWKLLKDVPRSATRKAARNMPSYVYFFSVGRTTFRGHMLGVAASWVVQVGME 232

Query: 241 IYRYFNRIMNSKEEDSD----GVNKAKEAKVLGKKVTGITIRCGASLVFASIGAGIGATT 296
           +YR+F  I N+ +EDS+      +  K+ ++LG+KV   +IRCG+SLVFASIGAGIGAT 
Sbjct: 233 LYRFFRSIFNANDEDSNVDTTKQDTTKQVQLLGQKVALTSIRCGSSLVFASIGAGIGATL 292

Query: 297 VRPSIGQWIGCAVGDLAGPIVVSFCLDRALHLDL 330
           VRPS+GQWIGCA GDL GPI+V+FC D+A  + L
Sbjct: 293 VRPSLGQWIGCAAGDLVGPIIVAFCADKAFQVAL 326

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502582|gb|AFK39357.1| unknown [Lotus japonicus]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 208/332 (62%), Positives = 256/332 (77%), Gaps = 8/332 (2%)

Query: 1   MAGIAIILDLWRKNPSFCS--PHTALHSSGLLSATAAAASAAAAAPFASRFLFGSPKIPV 58
           MAG+AI+LDLWRKN +  S     +  S    +A  AAA+ AA   FASR LFGS    V
Sbjct: 1   MAGVAILLDLWRKNQNLSSGHAFHSSASFSASTAATAAATFAAGTGFASRALFGSS---V 57

Query: 59  AYCDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSLRS 118
           A+CDAGAA++EDYI +       IF +D+++++TK+YN+ELKPLFSAFELRA AMTS+RS
Sbjct: 58  AHCDAGAALSEDYISSIQSASERIFNYDSLRHSTKQYNVELKPLFSAFELRAFAMTSIRS 117

Query: 119 FLMFYLPLLEPDMSTEDDDDDFPQDSPEQRRLDLVVPFKKSVKQIVRETTVVTTRRILER 178
           FLMFYLPLLEP    EDD+D F +D+ +   +DLVVP KKSVKQI+RET+VVTTRRILER
Sbjct: 118 FLMFYLPLLEPRAEMEDDED-FLEDN-QDHHVDLVVPLKKSVKQIIRETSVVTTRRILER 175

Query: 179 LAVHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQIG 238
           +AVHYVSQRMAWKLLKDVP+SATRKA R +PT VYFF VSRTT RGH LGVAASW++Q+G
Sbjct: 176 IAVHYVSQRMAWKLLKDVPRSATRKAARKMPTLVYFFSVSRTTFRGHMLGVAASWLIQVG 235

Query: 239 IEIYRYFNRIMNSKEEDSDGVNKAKEAKVLGKKVTGITIRCGASLVFASIGAGIGATTVR 298
           +++YR+   +  SK+ED DG +K K+   L  K+   TIRC +SL+FASIGAGIGAT VR
Sbjct: 236 VDLYRFIKPMFKSKDEDIDG-DKTKQVGPLAPKIVIATIRCTSSLIFASIGAGIGATIVR 294

Query: 299 PSIGQWIGCAVGDLAGPIVVSFCLDRALHLDL 330
           PS+GQWIGCAVGDL GPI+V+ CLD+   + L
Sbjct: 295 PSLGQWIGCAVGDLTGPIIVACCLDQVFQVKL 326

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388505284|gb|AFK40708.1| unknown [Lotus japonicus]

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 208/332 (62%), Positives = 255/332 (76%), Gaps = 8/332 (2%)

Query: 1   MAGIAIILDLWRKNPSFCS--PHTALHSSGLLSATAAAASAAAAAPFASRFLFGSPKIPV 58
           MAG+AI+LDLWRKN +  S     +  S    +A  AAA+ AA   FASR LFGS    V
Sbjct: 1   MAGVAILLDLWRKNQNLSSGHAFHSSASFSASTAATAAATFAAGTGFASRALFGSS---V 57

Query: 59  AYCDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRALAMTSLRS 118
           A+CDAGAA++EDYI +       IF +D+++++TK+YN+ELKPLFSAFELRA AMTS+RS
Sbjct: 58  AHCDAGAALSEDYISSIQSASERIFNYDSLRHSTKQYNVELKPLFSAFELRAFAMTSIRS 117

Query: 119 FLMFYLPLLEPDMSTEDDDDDFPQDSPEQRRLDLVVPFKKSVKQIVRETTVVTTRRILER 178
           FLMFYLPLLEP    EDD+D F +D+ +   +DLVVP KKSVKQI+RET+VVTTRRILER
Sbjct: 118 FLMFYLPLLEPRAEMEDDED-FLEDN-QDHHVDLVVPLKKSVKQIIRETSVVTTRRILER 175

Query: 179 LAVHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQIG 238
            AVHYVSQRMAWKLLKDVP+SATRKA R +PT VYFF VSRTT RGH LGVAASW++Q+G
Sbjct: 176 TAVHYVSQRMAWKLLKDVPRSATRKAARKMPTLVYFFSVSRTTFRGHMLGVAASWLIQVG 235

Query: 239 IEIYRYFNRIMNSKEEDSDGVNKAKEAKVLGKKVTGITIRCGASLVFASIGAGIGATTVR 298
           +++YR+   +  SK+ED DG +K K+   L  K+   TIRC +SL+FASIGAGIGAT VR
Sbjct: 236 VDLYRFIKPMFKSKDEDIDG-DKTKQVGPLAPKIVIATIRCTSSLIFASIGAGIGATIVR 294

Query: 299 PSIGQWIGCAVGDLAGPIVVSFCLDRALHLDL 330
           PS+GQWIGCAVGDL GPI+V+ CLD+   + L
Sbjct: 295 PSLGQWIGCAVGDLTGPIIVACCLDQVFQVKL 326

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806019|ref|NP_001241429.1| uncharacterized protein LOC100807129 [Glycine max] gi|255644981|gb|ACU22990.1| unknown [Glycine max]

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/335 (60%), Positives = 254/335 (75%), Gaps = 20/335 (5%)

Query: 1   MAGIAIILDLWRKNPSFCSPHTALHSSGLLSATAAAASAAA----------AAPFASRFL 50
           MAGIAI+LDLWRKN +  S    LHSS    +++A  SA+A             FASR L
Sbjct: 1   MAGIAILLDLWRKNQNLSS---GLHSSHAFQSSSAFCSASAATAAAASLAAGTGFASRAL 57

Query: 51  FGSPKIPVAYCDAGAAITEDYIPNFGKVPGSIFQHDAIKYTTKEYNIELKPLFSAFELRA 110
           FGS    VAYCDAGA + EDYI N        +++DA++Y+TK+YN+ELKPLFSAFELRA
Sbjct: 58  FGSS---VAYCDAGAVLPEDYISNIQSSFERNYKYDAVRYSTKQYNVELKPLFSAFELRA 114

Query: 111 LAMTSLRSFLMFYLPLLEPDMSTEDDDDDFPQDSPEQRRLDLVVPFKKSVKQIVRETTVV 170
            A+TSLRSFLMFYLPLLEP +  EDD++   Q+  ++  +DLVVPFKKSVKQI+RETTVV
Sbjct: 115 FALTSLRSFLMFYLPLLEPRVEMEDDEN--FQEEDQEHHVDLVVPFKKSVKQIMRETTVV 172

Query: 171 TTRRILERLAVHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVA 230
           TTRRILER+ VHYVSQRMAWKLLKD+P+SATRKA R +PT VY + VSRTT RGH LGVA
Sbjct: 173 TTRRILERIVVHYVSQRMAWKLLKDIPRSATRKAGRSMPTLVYVYCVSRTTFRGHMLGVA 232

Query: 231 ASWIVQIGIEIYRYFNRIMNSKEEDSDGVNKAKEAKVLGKKVTGITIRCGASLVFASIGA 290
           ASW+VQ+GI++YR+F+     + ED+D V++  +  VLG+KV   T+RC +SL+FASIGA
Sbjct: 233 ASWLVQVGIDLYRFFSSTFQGQYEDND-VDQTNQVGVLGQKVVIATVRCTSSLIFASIGA 291

Query: 291 GIGATTV-RPSIGQWIGCAVGDLAGPIVVSFCLDR 324
           GIGAT + RP +GQW+GCA+GDL GPI+V+FC DR
Sbjct: 292 GIGATFIRRPWLGQWVGCAIGDLGGPIIVAFCADR 326

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	330
TAIR|locus:2162132	329	AT5G55610 [Arabidopsis thalian	0.984	0.987	0.527	8e-85

TAIR|locus:2162132 AT5G55610 [Arabidopsis thaliana (taxid:3702)]

 Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
 Identities = 175/332 (52%), Positives = 217/332 (65%)

Query:     1 MAGIAIILDLWRKNPSFCSPHTXXXXXXXXXXXXXXXXXXXXXXXXXRFLFGSPKIPVAY 60
             MAGIA++LDL +K+ S  + H+                         RFLFGS +  VAY
Sbjct:     1 MAGIALVLDLLKKSQSKNTLHSSSFYSASAAAVSAAASAPFAS----RFLFGSFEPRVAY 56

Query:    61 CDAGAAITEDYIPNFGKVPGSIFQHDAIKYTT--KEYNIELKPLFSAFELRALAMTSLRS 118
             CDA AAI +DY+    K+   + Q   + Y +  KEYNI+ KP+ SAFE RALAMT++RS
Sbjct:    57 CDAAAAIDDDYLGAIRKMSADVLQRQPLAYISRSKEYNIQPKPVLSAFEFRALAMTTVRS 116

Query:   119 FLMFYLPLLEPDMSTEXXXXXFPQDSPEQRRLDLVVPFKKSVKQXXXXXXXXXXXXXXXX 178
              LMFYLPLLEP  ++E         + E R  DL+VP KKS KQ                
Sbjct:   117 LLMFYLPLLEPKTASEDDDDFLNNAAEENRHTDLIVPLKKSAKQIARETTVVTTRRVLER 176

Query:   179 XAVHYVSQRMAWKLLKDVPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQIG 238
              A+ YVSQRMAWKLLKDVP+SA RKAQRGLPT VY F+VS+TTLRGHFLG+AASW+VQ+G
Sbjct:   177 LALSYVSQRMAWKLLKDVPQSALRKAQRGLPTHVYIFKVSQTTLRGHFLGIAASWVVQVG 236

Query:   239 IEIYR-YFNRIMNSKEEDSDGVNKAKEAKVLGKKVTGITIRCGASLVFASIGAGIGATTV 297
             IEIYR  F  +   +EE+ + V  +++AK LG KV GIT+RCGASLVFA+IGAGI +  +
Sbjct:   237 IEIYRCVFPNVKPEEEEEEEKVEISQQAKDLGNKVVGITVRCGASLVFAAIGAGICSCLI 296

Query:   298 RPSIGQWIGCAVGDLAGPIVVSFCLDRALHLD 329
             RPS GQWIGCA+GDLAGP+VVS CL + L  D
Sbjct:   297 RPSTGQWIGCALGDLAGPMVVSVCLQKTLQAD 328


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.139   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      330       283   0.00084  115 3  11 22  0.45    33
                                                     33  0.42    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  620 (66 KB)
  Total size of DFA:  205 KB (2115 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.25u 0.10s 20.35t   Elapsed:  00:00:01
  Total cpu time:  20.25u 0.10s 20.35t   Elapsed:  00:00:01
  Start:  Fri May 10 08:34:02 2013   End:  Fri May 10 08:34:03 2013

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0006096 "glycolysis" evidence=RCA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0009060 "aerobic respiration" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00033347001 SubName- Full=Chromosome chr19 scaffold_66, whole genome shotgun sequence; (332 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	330
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 4e-06
 Identities = 50/328 (15%), Positives = 85/328 (25%), Gaps = 92/328 (28%)

Query: 67  ITEDYIPNFGK---------VPGSIFQHDAIKYTTKEYNIELKP--LFSAFELRALAMTS 115
           I   +   F           +P SI   + I +     +       LF     +   M  
Sbjct: 21  ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ 80

Query: 116 LRSFLMFYLPLLEPD-------MSTEDDDDDFPQDSPEQRRLDL---VVPFKKSVKQIVR 165
                 F   +L  +       + TE            ++R  L      F K    + R
Sbjct: 81  -----KFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK--YNVSR 133

Query: 166 ETTVVTTRRILERLAVH-YVS-QRMA----WKLLKDVPKSATRKAQRGLPTTVYFFRVSR 219
               +  R+ L  L     V    +       +  DV  S   K Q  +   +++  +  
Sbjct: 134 LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS--YKVQCKMDFKIFWLNLKN 191

Query: 220 TTLRGHFLGVAASWIVQIGI-----------------EIYRYFNRIMNSKE-EDS----D 257
                  L +    + QI                    I     R++ SK  E+      
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL 251

Query: 258 GVNKAKEAKVLGKKVTGITIRCGASLV---FASIGAGIGA-TTVRPSI------------ 301
            V  AK             + C   L+   F  +   + A TT   S+            
Sbjct: 252 NVQNAKAWNAFN-------LSC-KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303

Query: 302 ----GQWIGCAVGDLA------GPIVVS 319
                +++ C   DL        P  +S
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPRRLS 331

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 4e-04
 Identities = 44/328 (13%), Positives = 84/328 (25%), Gaps = 133/328 (40%)

Query: 46  ASRFLFGSPKIPVAYCDAGAAITEDYI-----PNFGKVPGSIFQHDAIKY-------TTK 93
            +  LF +             + + ++      N+       F    IK         T+
Sbjct: 63  GTLRLFWT------LLSKQEEMVQKFVEEVLRINYK------FLMSPIKTEQRQPSMMTR 110

Query: 94  EYNIELKPLFS----------------------AFELR----------------ALAMTS 115
            Y  +   L++                        ELR                 +A+  
Sbjct: 111 MYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170

Query: 116 LRS--------FLMFYLPL-------------------LEPDMSTEDDDDDFPQDSPEQ- 147
             S        F +F+L L                   ++P+ ++  D     +      
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230

Query: 148 ----RRLDLVVPFKKS------V--KQIVRE-----TTVVTTR--RILERLAV----HYV 184
               RRL    P++        V   +           ++TTR  ++ + L+     H  
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290

Query: 185 SQRMAWKLLKD-----VPKSATRKAQRGLPTTVYFFRVSRTTLRGHFLGVAASWIVQIGI 239
               +  L  D     + K    + Q  LP         R  L  +   ++      I  
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQD-LP---------REVLTTNPRRLS-----IIAE 335

Query: 240 EIYRYFNRIMNSKEEDSDGVNKAKEAKV 267
            I        N K  + D +    E+ +
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESSL 363

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00