Citrus Sinensis ID: 044254
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 312 | ||||||
| 255573625 | 502 | conserved hypothetical protein [Ricinus | 0.996 | 0.619 | 0.803 | 1e-147 | |
| 449450706 | 502 | PREDICTED: uncharacterized protein LOC10 | 0.996 | 0.619 | 0.829 | 1e-147 | |
| 225440328 | 502 | PREDICTED: uncharacterized protein LOC10 | 0.996 | 0.619 | 0.790 | 1e-146 | |
| 225434992 | 500 | PREDICTED: uncharacterized protein LOC10 | 0.987 | 0.616 | 0.796 | 1e-141 | |
| 356572331 | 497 | PREDICTED: uncharacterized protein LOC10 | 0.983 | 0.617 | 0.782 | 1e-139 | |
| 356548131 | 503 | PREDICTED: uncharacterized protein LOC10 | 0.996 | 0.618 | 0.756 | 1e-139 | |
| 356537299 | 513 | PREDICTED: uncharacterized protein LOC10 | 0.996 | 0.606 | 0.732 | 1e-136 | |
| 449448641 | 502 | PREDICTED: uncharacterized protein LOC10 | 0.993 | 0.617 | 0.752 | 1e-136 | |
| 356505104 | 495 | PREDICTED: uncharacterized protein LOC10 | 0.961 | 0.606 | 0.762 | 1e-133 | |
| 147767466 | 493 | hypothetical protein VITISV_041185 [Viti | 0.990 | 0.626 | 0.752 | 1e-133 |
| >gi|255573625|ref|XP_002527735.1| conserved hypothetical protein [Ricinus communis] gi|223532876|gb|EEF34648.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 250/311 (80%), Positives = 281/311 (90%)
Query: 1 MGEDLLTSLSMENHHPSTLLSMDSSGVSNEELDREMNRSMILSRPPDINLPLSAERSPPP 60
MG+ LLT+LSMENHHPSTLLSMDSS S+EELD EMNR +ILSRPPDINLPLS ERSPPP
Sbjct: 1 MGDSLLTALSMENHHPSTLLSMDSSASSHEELDLEMNRQIILSRPPDINLPLSVERSPPP 60
Query: 61 PSWSTDPFDILDVSLGPQVNESDNLLNASKSGRKCAKRLDSVWGACFFFTYYFKPVLNEK 120
SW++DP DILDV LG QV E+++ LN K GRKCAKR+DS+WGA FFF +YFKP LNEK
Sbjct: 61 QSWNSDPCDILDVGLGQQVYETESFLNVPKVGRKCAKRIDSIWGAWFFFNFYFKPALNEK 120
Query: 121 SKCKVIRDSNGFLEFDKTDLELEVFLVQHDMENMYMWVFKERPENALGKMQLRSYMNGHS 180
SK K++RDSNG FDK+DL+LEVF+VQHDMENMYMWVFK+RPENALGKMQLRSYMNGHS
Sbjct: 121 SKAKIVRDSNGVSRFDKSDLKLEVFMVQHDMENMYMWVFKDRPENALGKMQLRSYMNGHS 180
Query: 181 RQGERPFPFSVEKGFVRSHRMQRKHYRGLSNPQCVHGIEVVSSPNLKGIDEEEQKRWMEL 240
RQGERPFPFSV+KGFVRSHRMQRKHYRGLSNPQCVHGIEVV SPNL G+DE+E+KRWMEL
Sbjct: 181 RQGERPFPFSVDKGFVRSHRMQRKHYRGLSNPQCVHGIEVVPSPNLLGLDEDERKRWMEL 240
Query: 241 TGRDLNFSVPPEASEFSSWRNLPNTEFELDRPLPPLKTHSNSHPKKLLNGSALNLSTRPV 300
TGRDLNF++PP+AS+FSSWRNLPNT+FEL+RP PP+K SNSH KKLLNGS LNLST+P
Sbjct: 241 TGRDLNFTIPPDASDFSSWRNLPNTDFELERPPPPIKNASNSHSKKLLNGSGLNLSTQPS 300
Query: 301 SHSNGDGVDLS 311
SHSNGDG+DLS
Sbjct: 301 SHSNGDGMDLS 311
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449450706|ref|XP_004143103.1| PREDICTED: uncharacterized protein LOC101220444 [Cucumis sativus] gi|449515281|ref|XP_004164678.1| PREDICTED: uncharacterized protein LOC101224026 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|225440328|ref|XP_002263786.1| PREDICTED: uncharacterized protein LOC100254432 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225434992|ref|XP_002284056.1| PREDICTED: uncharacterized protein LOC100243332 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356572331|ref|XP_003554322.1| PREDICTED: uncharacterized protein LOC100778843 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356548131|ref|XP_003542457.1| PREDICTED: uncharacterized protein LOC100804386 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356537299|ref|XP_003537166.1| PREDICTED: uncharacterized protein LOC100787547 isoform 1 [Glycine max] gi|356537301|ref|XP_003537167.1| PREDICTED: uncharacterized protein LOC100787547 isoform 2 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449448641|ref|XP_004142074.1| PREDICTED: uncharacterized protein LOC101215206 isoform 1 [Cucumis sativus] gi|449448643|ref|XP_004142075.1| PREDICTED: uncharacterized protein LOC101215206 isoform 2 [Cucumis sativus] gi|449502560|ref|XP_004161677.1| PREDICTED: uncharacterized LOC101215206 isoform 1 [Cucumis sativus] gi|449502564|ref|XP_004161678.1| PREDICTED: uncharacterized LOC101215206 isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356505104|ref|XP_003521332.1| PREDICTED: uncharacterized protein LOC100799357 [Glycine max] | Back alignment and taxonomy information |
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| >gi|147767466|emb|CAN66716.1| hypothetical protein VITISV_041185 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 312 | ||||||
| TAIR|locus:2040721 | 494 | SLT1 "AT2G37570" [Arabidopsis | 0.964 | 0.609 | 0.759 | 8.7e-127 | |
| TAIR|locus:2101227 | 489 | FYD [Arabidopsis thaliana (tax | 0.964 | 0.615 | 0.669 | 8.7e-111 | |
| TAIR|locus:2181803 | 508 | AT5G02480 "AT5G02480" [Arabido | 0.987 | 0.606 | 0.661 | 4.3e-109 |
| TAIR|locus:2040721 SLT1 "AT2G37570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1245 (443.3 bits), Expect = 8.7e-127, P = 8.7e-127
Identities = 231/304 (75%), Positives = 261/304 (85%)
Query: 11 MENHHPSTLLSMDSSGVSNEELDREMN--RSMILSRPPDINLPLSAERSPPPPSWSTDPF 68
MENHHPSTLLSMDSS S+EELD EMN R +LS PPDINLPLSAERSPPPP W+ D
Sbjct: 1 MENHHPSTLLSMDSSASSHEELDLEMNNNRQSLLSGPPDINLPLSAERSPPPPPWNLDAC 60
Query: 69 DILDVSLGPQVNESDNLLNA-SKSGRKCAKRLDSVWGACFFFTYYFKPVLNEKSKCKVIR 127
DILDV LG Q E++N ++ K GRKCAKR+DS+WGA FFF++YFKP LNEKSK K++R
Sbjct: 61 DILDVGLGSQAYETENYMSVVPKVGRKCAKRVDSIWGAWFFFSFYFKPALNEKSKAKIVR 120
Query: 128 DSNGFLEFDKTDLELEVFLVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGERPF 187
DSNG FDK+DL+L+VFLVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQG+R F
Sbjct: 121 DSNGISGFDKSDLKLDVFLVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGDRLF 180
Query: 188 PFSVEKGFVRSHRMQRKHYRGLSNPQCVHGIEVVSSPNLKGIDEEEQKRWMELTGRDLNF 247
PFSVEKGFVRSHRMQRKHYRGLSNPQCVHGIE+V PNL +DEEE+KRWMELTGRDLNF
Sbjct: 181 PFSVEKGFVRSHRMQRKHYRGLSNPQCVHGIELVPLPNLTCLDEEERKRWMELTGRDLNF 240
Query: 248 SVPPEASEFSSWRNLPNTEFELDRPLPPLKTHSNSHPKKLLNGSALNLSTRPVSHSNGDG 307
++PPEAS+F SWRNLPNT+FEL+RP P LK + +H KKLLNGS LNLST+P +HSNG+
Sbjct: 241 TIPPEASDFGSWRNLPNTDFELERPTPSLKNPTANHSKKLLNGSGLNLSTQPSNHSNGEA 300
Query: 308 VDLS 311
DLS
Sbjct: 301 TDLS 304
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| TAIR|locus:2101227 FYD [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2181803 AT5G02480 "AT5G02480" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 312 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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Score = 45.6 bits (107), Expect = 1e-05
Identities = 53/311 (17%), Positives = 88/311 (28%), Gaps = 100/311 (32%)
Query: 18 TLLSMDSSGVSN--EELDREMNRSMILSRPPDINLPLSAERSPPPPSWSTDPFDILDVSL 75
TLLS V EE+ R N ++S + E PS T +
Sbjct: 70 TLLSKQEEMVQKFVEEVLRI-NYKFLMSP-------IKTE--QRQPSMMTRMY------- 112
Query: 76 GPQVNESDNLLNASKSGRKCAKRLDSVWGACFFFTYYFKPVLNEKSKCKVIRDSN----- 130
+ + D L N ++ K +V +P L + +R +
Sbjct: 113 ---IEQRDRLYNDNQVFAK-----YNVSRL--------QPYLKLRQALLELRPAKNVLID 156
Query: 131 GFLEFDKTDLELEV---FLVQHDMENMYMWV---FKERPENALGKMQLRSYM---NGHSR 181
G L KT + L+V + VQ M+ W+ PE L +Q Y N SR
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 182 --QGER-PFPFSVEKGFVRSHRMQRKHYRGL------SNP--------QC---------- 214
+ +R + + L N C
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQ 276
Query: 215 -------VHGIEVVSSPNLKGIDEEEQK----RWMELTGRDLNFSVPPEASEFS------ 257
+ + + +E K ++++ +DL P E +
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL----PREVLTTNPRRLSI 332
Query: 258 ---SWRNLPNT 265
S R+ T
Sbjct: 333 IAESIRDGLAT 343
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00