Citrus Sinensis ID: 044326


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100--
FSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQVVSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMIDVLREGNMQDMNKKEFLE
ccccEEEEEEccccccccccccHHHHHHHHHHcccccccccEEEEEEEEcccccEEEEcHHHHHHHHHHHHHcccccccccHHHHHHHcccccHHHHHHHcc
cccEEEEEEEccccccccccHHHHHHHHHHHHcccccccccEEEEEEEEcccccEEEEccHHHHHHHHHHHHHccccccEHHHHHHHHcccccHccHHHHHc
FSGYFLQVLEshqagkldtsgTAKAVISSFQKLRVSFDMDQVVSFQFQhnvcgrsiyaeGTVDALLFLSKKVQSKADKCISNMIDVLRegnmqdmnkkefle
FSGYFLQVLEShqagkldtsgtAKAVISSFQKLRVSFDMDQVVSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMIDVlregnmqdmnkkefle
FSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQVVSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMIDVLREGNMQDMNKKEFLE
****FLQVL***********GTAKAVISSFQKLRVSFDMDQVVSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMIDVL***************
*SGYFLQVLE*********SGTAKAVISSFQKLRVSFDMDQVVSFQFQHNVCGRSIYAEGTVDALLFLSKKVQ*KADKCISNMIDVLREGNMQDMN**E*L*
FSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQVVSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMIDVLREGNMQDMNKKEFLE
*SGYFLQVLESHQAG*LDTSGTAKAVISSFQKLRVSFDMDQVVSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMIDVLREGNMQ**N******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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FSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQVVSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMIDVLREGNMQDMNKKEFLE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query102 2.2.26 [Sep-21-2011]
Q8LB01349 4-hydroxy-tetrahydrodipic yes no 0.911 0.266 0.573 1e-33
O80574347 4-hydroxy-tetrahydrodipic no no 0.911 0.268 0.565 2e-32
Q67W29343 Probable 4-hydroxy-tetrah yes no 0.911 0.271 0.550 1e-30
Q10P67325 Probable 4-hydroxy-tetrah no no 0.911 0.286 0.527 4e-29
>sp|Q8LB01|DAPB2_ARATH 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic OS=Arabidopsis thaliana GN=DAPB2 PE=2 SV=1 Back     alignment and function desciption
 Score =  141 bits (356), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/129 (57%), Positives = 86/129 (66%), Gaps = 36/129 (27%)

Query: 1   FSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQV------------------ 42
           F+GY L+V+ESHQA KLD SGTAKAVIS FQKL VS+DMDQ+                  
Sbjct: 221 FAGYSLEVMESHQASKLDASGTAKAVISCFQKLGVSYDMDQIQLIRDPKQQIEVVGVPEE 280

Query: 43  ------------------VSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMI 84
                             VSF+FQHNVCGRSIYAEGTVDA+LFL+KK++SKA+K I NMI
Sbjct: 281 HVSGHAFHLYHLTSPDKTVSFEFQHNVCGRSIYAEGTVDAVLFLAKKIRSKAEKRIYNMI 340

Query: 85  DVLREGNMQ 93
           DVLREGNM+
Sbjct: 341 DVLREGNMR 349





Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 2EC: 6
>sp|O80574|DAPB1_ARATH 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic OS=Arabidopsis thaliana GN=DAPB1 PE=2 SV=2 Back     alignment and function description
>sp|Q67W29|DAPB1_ORYSJ Probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAPB1 PE=2 SV=1 Back     alignment and function description
>sp|Q10P67|DAPB2_ORYSJ Probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAPB2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query102
255585299 354 dihydrodipicolinate reductase, putative 0.911 0.262 0.604 2e-33
224117678 283 predicted protein [Populus trichocarpa] 0.911 0.328 0.601 2e-32
297820840 349 dihydrodipicolinate reductase family pro 0.911 0.266 0.573 3e-32
18411368 349 dihydrodipicolinate reductase 2 [Arabido 0.911 0.266 0.573 5e-32
42572737 343 dihydrodipicolinate reductase 2 [Arabido 0.911 0.271 0.573 5e-32
297828127 347 dihydrodipicolinate reductase family pro 0.911 0.268 0.565 6e-31
18406430 347 dihydrodipicolinate reductase 1 [Arabido 0.911 0.268 0.565 6e-31
363807337 344 uncharacterized protein LOC100807997 [Gl 0.911 0.270 0.550 2e-30
356520326 344 PREDICTED: dihydrodipicolinate reductase 0.911 0.270 0.558 3e-30
255638009 344 unknown [Glycine max] 0.911 0.270 0.558 3e-30
>gi|255585299|ref|XP_002533348.1| dihydrodipicolinate reductase, putative [Ricinus communis] gi|223526813|gb|EEF29033.1| dihydrodipicolinate reductase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/129 (60%), Positives = 87/129 (67%), Gaps = 36/129 (27%)

Query: 1   FSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQV------------------ 42
           FSGY LQVLESHQAGKLD SGTAKAVIS FQKL VSFDMD+V                  
Sbjct: 226 FSGYSLQVLESHQAGKLDISGTAKAVISCFQKLGVSFDMDKVQMIRDPRQQIEMVGVPEE 285

Query: 43  ------------------VSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMI 84
                             VSF+FQHNVCGRSIYAEGTVDA++FL+KK+QS+ADK I +MI
Sbjct: 286 HLAGHAFHMYHLTSPDETVSFEFQHNVCGRSIYAEGTVDAVIFLAKKIQSRADKRIYSMI 345

Query: 85  DVLREGNMQ 93
           DVLREGNM+
Sbjct: 346 DVLREGNMR 354




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117678|ref|XP_002331604.1| predicted protein [Populus trichocarpa] gi|222874000|gb|EEF11131.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297820840|ref|XP_002878303.1| dihydrodipicolinate reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297324141|gb|EFH54562.1| dihydrodipicolinate reductase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18411368|ref|NP_567088.1| dihydrodipicolinate reductase 2 [Arabidopsis thaliana] gi|75245889|sp|Q8LB01.1|DAPB2_ARATH RecName: Full=4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic; Short=HTPA reductase 2; Flags: Precursor gi|21593099|gb|AAM65048.1| unknown [Arabidopsis thaliana] gi|111074490|gb|ABH04618.1| At3g59890 [Arabidopsis thaliana] gi|332646461|gb|AEE79982.1| dihydrodipicolinate reductase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|42572737|ref|NP_974464.1| dihydrodipicolinate reductase 2 [Arabidopsis thaliana] gi|332646460|gb|AEE79981.1| dihydrodipicolinate reductase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297828127|ref|XP_002881946.1| dihydrodipicolinate reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297327785|gb|EFH58205.1| dihydrodipicolinate reductase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18406430|ref|NP_566006.1| dihydrodipicolinate reductase 1 [Arabidopsis thaliana] gi|75223205|sp|O80574.2|DAPB1_ARATH RecName: Full=4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic; Short=HTPA reductase 1; Flags: Precursor gi|20197071|gb|AAC23412.2| expressed protein [Arabidopsis thaliana] gi|21536558|gb|AAM60890.1| unknown [Arabidopsis thaliana] gi|26452703|dbj|BAC43434.1| unknown protein [Arabidopsis thaliana] gi|30793829|gb|AAP40367.1| unknown protein [Arabidopsis thaliana] gi|330255270|gb|AEC10364.1| dihydrodipicolinate reductase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|363807337|ref|NP_001242117.1| uncharacterized protein LOC100807997 [Glycine max] gi|255671801|gb|ACU26533.1| dihydrodipicolinate reductase [Glycine max] Back     alignment and taxonomy information
>gi|356520326|ref|XP_003528814.1| PREDICTED: dihydrodipicolinate reductase 2, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|255638009|gb|ACU19320.1| unknown [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query102
TAIR|locus:2080482349 AT3G59890 [Arabidopsis thalian 0.529 0.154 0.796 2e-34
TAIR|locus:2051854347 AT2G44040 [Arabidopsis thalian 0.529 0.155 0.777 1.7e-33
TAIR|locus:2080482 AT3G59890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 227 (85.0 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
 Identities = 43/54 (79%), Positives = 51/54 (94%)

Query:    40 DQVVSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMIDVLREGNMQ 93
             D+ VSF+FQHNVCGRSIYAEGTVDA+LFL+KK++SKA+K I NMIDVLREGNM+
Sbjct:   296 DKTVSFEFQHNVCGRSIYAEGTVDAVLFLAKKIRSKAEKRIYNMIDVLREGNMR 349


GO:0000166 "nucleotide binding" evidence=IEA
GO:0008839 "4-hydroxy-tetrahydrodipicolinate reductase" evidence=IEA;IGI;ISS
GO:0009089 "lysine biosynthetic process via diaminopimelate" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0070402 "NADPH binding" evidence=IEA
TAIR|locus:2051854 AT2G44040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query102
PLN02775286 PLN02775, PLN02775, Probable dihydrodipicolinate r 4e-53
TIGR02130275 TIGR02130, dapB_plant, dihydrodipicolinate reducta 2e-41
>gnl|CDD|178374 PLN02775, PLN02775, Probable dihydrodipicolinate reductase Back     alignment and domain information
 Score =  167 bits (424), Expect = 4e-53
 Identities = 76/128 (59%), Positives = 84/128 (65%), Gaps = 36/128 (28%)

Query: 1   FSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQV------------------ 42
           FSGY L+V+ESHQA KLDTSGTAKAVISSF+KL VSFDMDQ+                  
Sbjct: 158 FSGYTLEVVESHQATKLDTSGTAKAVISSFRKLGVSFDMDQIELIRDPKQQLEGVGVPEE 217

Query: 43  ------------------VSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMI 84
                             VSF+FQHNVCGRSIYAEGTVDA+LFL+KK+   ADK I NMI
Sbjct: 218 HLNGHAFHTYRLTSPDGTVSFEFQHNVCGRSIYAEGTVDAVLFLAKKIAEGADKRIYNMI 277

Query: 85  DVLREGNM 92
           DVLREGNM
Sbjct: 278 DVLREGNM 285


Length = 286

>gnl|CDD|131185 TIGR02130, dapB_plant, dihydrodipicolinate reductase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 102
PLN02775286 Probable dihydrodipicolinate reductase 100.0
TIGR02130275 dapB_plant dihydrodipicolinate reductase. This nar 100.0
PF05173132 DapB_C: Dihydrodipicolinate reductase, C-terminus; 99.98
COG0289266 DapB Dihydrodipicolinate reductase [Amino acid tra 99.97
TIGR00036266 dapB dihydrodipicolinate reductase. 99.97
PRK00048257 dihydrodipicolinate reductase; Provisional 99.97
>PLN02775 Probable dihydrodipicolinate reductase Back     alignment and domain information
Probab=100.00  E-value=1.7e-33  Score=223.13  Aligned_cols=92  Identities=78%  Similarity=1.093  Sum_probs=78.6

Q ss_pred             CCCceEEEEccccCCCCChhhHHHHHHHHHHhcCCCCC---------CC----ce---------------------EE--
Q 044326            1 FSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFD---------MD----QV---------------------VS--   44 (102)
Q Consensus         1 f~~yDieI~E~HH~~K~DaSGTA~~La~~i~~~g~~~~---------~~----~i---------------------e~--   44 (102)
                      |++||+||+|+||++|+|+||||++|++.|..+|.+++         ..    .|                     |+  
T Consensus       158 f~~yDiEIiE~HH~~K~DaSGTA~~lae~i~~~g~~~~~~~~~~~R~~~~~~~~igi~~~~lRgg~~HtV~f~~~~E~~~  237 (286)
T PLN02775        158 FSGYTLEVVESHQATKLDTSGTAKAVISSFRKLGVSFDMDQIELIRDPKQQLEGVGVPEEHLNGHAFHTYRLTSPDGTVS  237 (286)
T ss_pred             cCCCCEEEEECCCCCCCCCcHHHHHHHHHHHHhCCcccccccccccCccccccccceeeecccCCCcEEEEEecCCCeEE
Confidence            67899999999999999999999999999875543210         00    11                     77  


Q ss_pred             EEEEEeeCCchhhHHHHHHHHHHhhccccCCCCCCceehHHHhcCCcc
Q 044326           45 FQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMIDVLREGNM   92 (102)
Q Consensus        45 Iel~H~A~sR~~FA~GAv~AA~wL~~k~~~~~~~G~Y~M~DvL~~g~~   92 (102)
                      |||+|+|+||++||.|||+||+||.+|+.++.+||+|+|.|||+.|.|
T Consensus       238 iel~H~A~sR~~FA~GAv~AA~wL~~k~~~~~~pGlY~M~DVL~~~~~  285 (286)
T PLN02775        238 FEFQHNVCGRSIYAEGTVDAVLFLAKKIAEGADKRIYNMIDVLREGNM  285 (286)
T ss_pred             EEEEEEeCcHHHHHHHHHHHHHHHhcCcccCCCCCccCHHHHHhhcCC
Confidence            999999999999999999999999998666667999999999998875



>TIGR02130 dapB_plant dihydrodipicolinate reductase Back     alignment and domain information
>PF05173 DapB_C: Dihydrodipicolinate reductase, C-terminus; InterPro: IPR022663 This entry represents the C-terminal region of Dihydrodipicolinate reductase Back     alignment and domain information
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00036 dapB dihydrodipicolinate reductase Back     alignment and domain information
>PRK00048 dihydrodipicolinate reductase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query102
1vm6_A228 DHPR, dihydrodipicolinate reductase; TM1520, struc 99.97
4f3y_A272 DHPR, dihydrodipicolinate reductase; structural ge 99.97
3qy9_A243 DHPR, dihydrodipicolinate reductase; rossmann fold 99.97
1dih_A273 Dihydrodipicolinate reductase; oxidoreductase; HET 99.97
3ijp_A288 DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, 99.97
1p9l_A245 Dihydrodipicolinate reductase; oxidoreductase, lys 99.96
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 Back     alignment and structure
Probab=99.97  E-value=6.8e-32  Score=207.19  Aligned_cols=84  Identities=27%  Similarity=0.409  Sum_probs=71.1

Q ss_pred             CCCceEEEEccccCCCCCh-hhHHHHHHHHHHhcCCCC---------CCCce------EEEEEEEeeCCchhhHHHHHHH
Q 044326            1 FSGYFLQVLESHQAGKLDT-SGTAKAVISSFQKLRVSF---------DMDQV------VSFQFQHNVCGRSIYAEGTVDA   64 (102)
Q Consensus         1 f~~yDieI~E~HH~~K~Da-SGTA~~La~~i~~~g~~~---------~~~~i------e~Iel~H~A~sR~~FA~GAv~A   64 (102)
                      |++|||||+|+||++|+|+ ||||++|++.|.. ++.+         .+.+|      |+|||+|+|+||++||.||++|
T Consensus       128 l~~ydiEIiE~HH~~K~DAPSGTAl~lae~i~~-~I~i~svR~g~ivg~H~V~F~~~gE~iei~H~a~sR~~Fa~Gal~A  206 (228)
T 1vm6_A          128 LEDWDVEIVETHHRFKKDAPSGTAILLESALGK-SVPIHSLRVGGVPGDHVVVFGNIGETIEIKHRAISRTVFAIGALKA  206 (228)
T ss_dssp             TTTSEEEEEEEECTTCCCSSCHHHHHHHHHTTS-CCCEEEEECTTCCCEEEEEEECSSEEEEEEEEECCTHHHHHHHHHH
T ss_pred             cCCCCEEEEEcCCCCCCCCCCHHHHHHHHhccc-CCCEEEEECCCCcEEEEEEEeCCCcEEEEEEEeCcHHHhHhHHHHH
Confidence            4689999999999999997 9999999999842 1111         11122      9999999999999999999999


Q ss_pred             HHHhhccccCCCCCCceehHHHhcCC
Q 044326           65 LLFLSKKVQSKADKCISNMIDVLREG   90 (102)
Q Consensus        65 A~wL~~k~~~~~~~G~Y~M~DvL~~g   90 (102)
                      |+||.+|     +||+|+|+|||+.|
T Consensus       207 a~~l~~~-----~~G~Y~m~dvL~~g  227 (228)
T 1vm6_A          207 AEFLVGK-----DPGMYSFEEVIFGG  227 (228)
T ss_dssp             HHHHTTC-----CSEEECHHHHHTC-
T ss_pred             HHHHhcC-----CCCEecHHHHhcCC
Confidence            9999987     68999999999876



>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} Back     alignment and structure
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} Back     alignment and structure
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* Back     alignment and structure
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} Back     alignment and structure
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query102
d1diha2110 Dihydrodipicolinate reductase {Escherichia coli [T 99.7
d1yl7a2109 Dihydrodipicolinate reductase {Mycobacterium tuber 99.64
d1vm6a286 Dihydrodipicolinate reductase {Thermotoga maritima 99.58
>d1diha2 d.81.1.3 (A:131-240) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: Dihydrodipicolinate reductase-like
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]
Probab=99.70  E-value=7.2e-18  Score=114.49  Aligned_cols=31  Identities=29%  Similarity=0.372  Sum_probs=28.6

Q ss_pred             CCceEEEEccccCCCCCh-hhHHHHHHHHHHh
Q 044326            2 SGYFLQVLESHQAGKLDT-SGTAKAVISSFQK   32 (102)
Q Consensus         2 ~~yDieI~E~HH~~K~Da-SGTA~~La~~i~~   32 (102)
                      +.||++|+|+||++|+|+ ||||++||+.|..
T Consensus        19 ~~~dieI~E~HH~~K~DaPSGTAl~lae~i~~   50 (110)
T d1diha2          19 DYTDIEIIEAHHRHKVDAPSGTALAMGEAIAH   50 (110)
T ss_dssp             TTSEEEEEEEECTTCCSSSCHHHHHHHHHHHH
T ss_pred             cccChhhHHHHHhcCCCCCchHHHHHHHHHHH
Confidence            468999999999999997 9999999999874



>d1yl7a2 d.81.1.3 (A:106-214) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1vm6a2 d.81.1.3 (A:97-182) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure