Citrus Sinensis ID: 044432

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580----
Protein Sequence
MVGSNQKRHLLLYSLVALVFFYSYYYHSSLPTSKNLTRTETETFNLIPQNAPSHSSNFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEFRLWYDDHKARGIKPFLDGMRALSVSHRDAGVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREVFPGRVVKSMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLYDLARRGHPVIDADQFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDANFLPFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEVANLVDKVSLPRDHRNFANIMANLLRQKAGVMIKRVDESKIGLDIGTGSANQSSSAVGKKIVYWSADLGPDRIQKQLEELSLWDIDSDSSCKAVICHQS
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHEEEccccccccccccccccccccccccccccccccEEEEEEEEccccHHHHHHHHHHHccccccccEEEEEEEcccccccccccccHHHHHHHHHHHccccccccEEEEEEcccccHHHHHHHHccccccccEEEEEcccccccHHHHHHHHHHHHHHcccccccccccEEEEEcccccccccccccccccccccccEEEEcccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccHHHHHHHHccccccEEEEEEEcccHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHcccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccEEEEEccEEEcccccccccccccccEEEccccEEEEEEccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccEEEEEccccEEEEEccccccccccccccEEEEEccccccHHHHHHHHHcccEEEcccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEEEEcccHHHHHHHHHHHHHcccccccccEEEEEccccccccccccccccHHHHHHHHccccccccEEEEEEEcccccHHHHHHHccccccccEEEEEccccEEcHHHHHHHHHHHHHHccccccccccHHcccEEccccccccccccccccccccccEEEEcccccccEcccHHHHHHHHHHHHHccccccccccccEEEEEcccccccccccccccccHHcccccccccHEEccccHcccEEHHHHHHcccccEEccHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHccccEEEHHHHHHHcccEEccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEccEEEcccccEEccccccccEEEEcccEEEEEEccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcccEEEEEEcccEEEEEEccccccccccccccEEEEEcccccHHHHHHHHHHccEEEEEccccccEEEEccc
Coil and Loop (DISEMBL)
MVGSNQKRHLLLYSLVALVFFYSYyyhsslptsknltrtetetfnlipqnapshssnfTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHvyvdhsapladqsssesDSRAILRFLDgfewkfgdkFVHYRTANAGLQAQWleawwptsdheFAFVveddlevspLFYKFLRGLIVNYyyhapsnltrsiygaslqrprfvpgkhgnkihldngTQLFLYQLVGtwgqllfpqpwkefrlwyddhkargikpflDGMRALSVSHrdagvnygksagpdsklldessldfnilkmqplsnlkwydfcfrevfpgrvvksmddlgtvlpsvqrQETVLVVSLFGASDAVTRNLLCQFErinsqnhiflgshsdFLYDLArrghpvidadqfLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYsawvvdanflpfsndlflepidatsdfyygessKLLFVKSSSSVQKMWTKNFLYEVANlvdkvslprdhRNFANIMANLLRQKAGVMIkrvdeskigldigtgsanqsssavGKKIVYWSADLGPDRIQKQLEELslwdidsdssckavichqs
Flexible Loop (DISEMBL)
MVGSNQKRHLLLYSLVALVFFYSYYYHSSLPTSKNLTRTETETFNLipqnapshssNFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSapladqsssesDSRAILRFLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEFRLWYDDHKARGIKPFLDGMRALSVSHRDAGvnygksagpdskLLDESSLDFNILKMQPLSNLKWYDFCFREVFPGRVVKSMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLYDLARRGHPVIDADQFLNDIRAYESlslqssdarltkeVLVKVYVIKKCLEYRYSAWVVDANFLPFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEVANLVDKVSLPRDHRNFANIMANLLRQKAGVMIKRVDESKIGLdigtgsanqsssavGKKIVYWSADLGPDRIQKQLEELslwdidsdssckavichqs
Low Complexity Region (SEG)
MVGSNQKRHLLLYSLVALVFFYSYYYHSSLPTSKNLTRTETETFNLIPQNAPSHSSNFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEFRLWYDDHKARGIKPFLDGMRALSVSHRDAGVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREVFPGRVVKSMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLYDLARRGHPVIDADQFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDANFLPFSNDLFLEPIDATSDFYYGEsskllfvkssssvQKMWTKNFLYEVANLVDKVSLPRDHRNFANIMANLLRQKAGVMIKRVDESKIGLDIGTGSANQSSSAVGKKIVYWSADLGPDRIQKQLEELSLWDIDSDSSCKAVICHQS
Disordered region (IsUnstruct)
********HLLLYSLVALVFFYSYYYHSSLPT**********TFNLI********SNFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDH***************AILRFLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEFRLWYDDHKARGIKPFLDGMRALSVSH*********************SLDFNILKMQPLSNLKWYDFCFREVFPGRVVKSMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLYDLARRGHPVIDADQFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDANFLPFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEVANLVDKVSLPRDHRNFANIMANLLRQKAGVMIKRVDESKIGLDIGT********AVGKKIVYWSADLGPDRIQKQLEELSLWDIDSDSSCKAVIC***
Disordered Region (DISOPRED)
********HLLLYSLVALVFFYSYYYH*******************IPQNAPSHSSNFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEFRLWYDDHKARGIKPFLDGMRALSVSHRDAGVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREVFPGRVVKSMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLYDLARRGHPVIDADQFLNDIRA***********RLTKEVLVKVYVIKKCLEYRYSAWVVDANFLPFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEVAN**********HRNFANIMANLLRQKAGVMIKRVDESKIG*******************VYWSADLGPDR*QKQLEELSLWDIDSDSSCKAVICHQ*
Disordered Region (DISEMBL)
MVGSNQKRHLLLYSLVALVFFYSYYYHSSLPTSKNLTRTETETFNLIPQNAPSHSSNFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAP**********SRAILRFLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEFRLWYDDHKARGIKPFLDGMRALSVSHRDAGVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREVFPGRVVKSMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLYDLARRGHPVIDADQFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDANFLPFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEVANLVDKVSLPRDHRNFANIMANLLRQKAGVMIKRVDESKIGLDIGTG********VGKKIVYWSADLGPDRIQKQLEELSLWDIDSDSSCKAVICHQS
Disordered Region (DISPRO)
*****QKRHLLLYSLVALVFFYSYYYHSSLPTSKNLTRTETETFNLIPQNAPSHSSNFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEFRLWYDDHKARGIKPFLDGMRALSVSHRDAGVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREVFPGRVVKSMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLYDLARRGHPVIDADQFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDANFLPFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEVANLVDKVSLPRDHRNFANIMANLLRQKAGVMIKRVDESKIGLDIGTG********VGKKIVYWSADLGPDRIQKQLEELSLWDIDSDSSCKAVIC*Q*
Transmembrane Helix (TMHMM)
iiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVGSNQKRHLLLYSLVALVFFYSYYYHSSLPTSKNLTRTETETFNLIPQNAPSHSSNFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEFRLWYDDHKARGIKPFLDGMRALSVSHRDAGVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREVFPGRVVKSMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLYDLARRGHPVIDADQFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDANFLPFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEVANLVDKVSLPRDHRNFANIMANLLRQKAGVMIKRVDESKIGLDIGTGSANQSSSAVGKKIVYWSADLGPDRIQKQLEELSLWDIDSDSSCKAVICHQS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	584
225450923	638	PREDICTED: uncharacterized protein LOC10	0.926	0.847	0.585	0.0
255565111	624	transferase, transferring glycosyl group	0.941	0.881	0.561	0.0
224106019	617	predicted protein [Populus trichocarpa]	0.965	0.914	0.558	0.0
224055269	618	predicted protein [Populus trichocarpa]	0.979	0.925	0.558	0.0
357514305	622	hypothetical protein MTR_8g023050 [Medic	0.986	0.926	0.528	1e-180
356520166	617	PREDICTED: uncharacterized protein LOC10	0.974	0.922	0.528	1e-179
449444839	604	PREDICTED: uncharacterized protein LOC10	0.962	0.930	0.527	1e-175
297807275	631	predicted protein [Arabidopsis lyrata su	0.883	0.817	0.538	1e-168
15239915	624	uncharacterized protein [Arabidopsis tha	0.876	0.820	0.548	1e-166
115436008	609	Os01g0283000 [Oryza sativa Japonica Grou	0.883	0.847	0.488	1e-151

>gi|225450923|ref|XP_002280699.1| PREDICTED: uncharacterized protein LOC100259697 [Vitis vinifera] gi|296088351|emb|CBI36796.3| unnamed protein product [Vitis vinifera]

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/603 (58%), Positives = 436/603 (72%), Gaps = 62/603 (10%)

Query: 35  NLTRTETETFNLIPQNAPSHSSNFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHV 94
           NL      + N IP       SNF+ I+KVLTF+RL+SLSRCL SL+AA Y  D VHLH+
Sbjct: 45  NLPSNLNPSLNSIPS-----PSNFSFILKVLTFDRLSSLSRCLRSLAAAHYGRDTVHLHI 99

Query: 95  YVDH---------SAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGLQAQWL 145
           YVDH         S  L DQ   ES  R IL F+DGF+WKFG K VHYRT N GLQAQWL
Sbjct: 100 YVDHFPHADNVGKSELLLDQKLDES--RRILEFIDGFDWKFGQKVVHYRTGNVGLQAQWL 157

Query: 146 EAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVP 205
           EAWWP+SDHEFAFVVEDDLEVSPL+YKFL+ LI NYYY++ SN + SIYGASLQRPRFVP
Sbjct: 158 EAWWPSSDHEFAFVVEDDLEVSPLYYKFLKALIQNYYYNS-SNFSPSIYGASLQRPRFVP 216

Query: 206 GKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEFRLWYDDHKARGIKPFLDGM----- 260
           GKHGNKI LD+ T +FLYQLVGTWGQLLFP+PWKEFRLWYD HKA+GIKPFL GM     
Sbjct: 217 GKHGNKIQLDDETHIFLYQLVGTWGQLLFPKPWKEFRLWYDIHKAKGIKPFLQGMVTTGW 276

Query: 261 --------------------------------RALSVSHRDAGVNYGKSAGPDSKLLDES 288
                                           RALSVSHRDAGVNYGK+AGPDS LLDES
Sbjct: 277 YKKMGERIWTPWFISFIHSRGYFNIYTNFLHERALSVSHRDAGVNYGKTAGPDSYLLDES 336

Query: 289 SLDFNILKMQPLSNLKWYDFCFREVFPGRVVKSMDDLGTVLPSVQRQETVLVVSLFGASD 348
           SLD ++L+MQPL+ LKWYDFCF+EV PG VV+S ++LG+VL SVQ+Q+T+++VSLFGAS+
Sbjct: 337 SLDIDLLEMQPLTKLKWYDFCFKEVHPGTVVRSFEELGSVLHSVQKQDTIILVSLFGASE 396

Query: 349 AVTRNLLCQFERINSQNHIFLGSHSDFLYDLARRGHPVIDADQFLNDIRAYESLSLQSSD 408
            V RNLLC FE  N QN+IF+G +SDFL DLARRGHPVID DQFL+ +RA++  SLQ SD
Sbjct: 397 RVIRNLLCHFESFNIQNYIFMGLNSDFLLDLARRGHPVIDVDQFLSSVRAHKMKSLQDSD 456

Query: 409 ARLTKEVLVKVYVIKKCLEYRYSAWVVDANFLPFSNDLFLEPIDATSDFYYGESSKLLFV 468
             + K +LVK YVI+KCLE  Y++WVVD N L   +  FL+ IDAT DF+ G++ ++LF+
Sbjct: 457 MEVKKYILVKAYVIQKCLESGYNSWVVDGNMLFLRSTPFLDVIDATYDFHAGKTPEILFI 516

Query: 469 KSSSSVQKMWTKNFLYEVANLVDKV------SLP-RDHRNFANIMANLLRQKAGVMIKRV 521
           +SSSS +K+W  +F+++VA +VD V       +P  + + F  I+  L +Q+ G+ +K V
Sbjct: 517 RSSSSARKIWVDDFIHKVALMVDSVLEKGRGRIPTTEGKKFVYIVGELFKQE-GMRVKWV 575

Query: 522 DESKIGLDIGTGSANQSSSAVGKKIVYWSADLGPDRIQKQLEELSLWDIDSDSSCKAVIC 581
           DE  +GL+I + +ANQ+S    KK+V+WS ++G D IQK+LEEL LW ID+DSSC AV+C
Sbjct: 576 DEGSLGLEIDSRNANQTSQGNRKKMVFWSPEIGSDMIQKRLEELGLWIIDTDSSCTAVVC 635

Query: 582 HQS 584
           HQS
Sbjct: 636 HQS 638

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565111|ref|XP_002523548.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223537255|gb|EEF38887.1| transferase, transferring glycosyl groups, putative [Ricinus communis]

 Score =  684 bits (1766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/609 (56%), Positives = 436/609 (71%), Gaps = 59/609 (9%)

Query: 25  YYHSSLPTSK-------NLTRTETETFNLIPQNAPSHSSNFTLIIKVLTFNRLNSLSRCL 77
           +YHSSLP S        N         N  PQ+ PS    FT +IKVL FNRL+SLSRCL
Sbjct: 26  HYHSSLPLSPVHPDPNPNFIPINNVNKNFSPQSNPS----FTFLIKVLAFNRLDSLSRCL 81

Query: 78  HSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSR-----AILRFLDGFEWKFGDKFVH 132
            SL+ A+Y  D VHLHVY+DH  P A+ S +  D +      +L ++DGF W FG+K VH
Sbjct: 82  QSLANANYEGDTVHLHVYIDH-FPFANDSFNVLDQKLEETHKMLEYVDGFHWNFGNKVVH 140

Query: 133 YRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRS 192
           YRT+N GLQAQWLEAWWP+S++EFAFVVEDDLEVSPLFYKF++ +IVNYYY+   + + S
Sbjct: 141 YRTSNVGLQAQWLEAWWPSSNNEFAFVVEDDLEVSPLFYKFVKAVIVNYYYNVTGS-SPS 199

Query: 193 IYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEFRLWYDDHKARG 252
           IYG SLQRPRFVPGKHGNKI LD GT+LFLYQLVGTWGQ++FP+PWKEFRLWYD HK++G
Sbjct: 200 IYGVSLQRPRFVPGKHGNKIQLDPGTRLFLYQLVGTWGQIIFPKPWKEFRLWYDKHKSKG 259

Query: 253 IKPFLDGM-------------------------------------RALSVSHRDAGVNYG 275
           IKPFLDGM                                     RALSVSHRDAGVNYG
Sbjct: 260 IKPFLDGMVTNGWYKRLGERIWTPWFIKFVHSNGYFNIYTNLGHERALSVSHRDAGVNYG 319

Query: 276 KSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREVFPGRVVKSMDDLGTVLPSVQRQ 335
           K+AGPDS+L+DESS D+N L+MQPLSNLKWYDFCFREV PGRV ++MDDLG++LPSVQ+Q
Sbjct: 320 KTAGPDSQLVDESSFDYNFLEMQPLSNLKWYDFCFREVLPGRVARNMDDLGSLLPSVQKQ 379

Query: 336 ETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLYDLARRGHPVIDADQFLND 395
           +T+L+VS+FG SD +TRNLLC  ER+N QN+I +G  SDFLYDLARRGHP++DADQ L  
Sbjct: 380 QTILLVSMFGTSDEITRNLLCHLERLNIQNYIIMGPSSDFLYDLARRGHPIVDADQLLES 439

Query: 396 IRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDANFLPFSNDLFLEPIDATS 455
           +R+ + +  ++ +++   +VLVK YVIKKCLE+ Y++W+VD N L  ++DLF   + A++
Sbjct: 440 LRSQKLIGFRNPNSKQV-DVLVKGYVIKKCLEH-YNSWMVDTNMLLVNDDLFHGFVGASN 497

Query: 456 DFYYGESSKLLFVKSSSSVQKMWTKNFLYEVANLVDKVSLPRDHRNFANIMANLLRQKAG 515
           D Y G+ S++ FV+ SSS +K+WT +F+ +V   VD+ S     RNF   ++ LL Q  G
Sbjct: 498 DMYAGKRSEIFFVRGSSSARKIWTDDFVNKVGTAVDQASSSGGSRNFVYAVSKLLEQN-G 556

Query: 516 VMIKRVDESKIGLDIGTGSANQSSSAVGKKIVYWSADLGPDRIQKQLEELSLWDIDSDSS 575
           + I  +DE+  G+ IG  S N+SS   G K++YWSA++G + +QK+LEEL +W ID DSS
Sbjct: 557 IRINWIDETSFGMKIGADSINRSSLEAG-KMIYWSAEMGLNLVQKRLEELDMWAIDGDSS 615

Query: 576 CKAVICHQS 584
           CKAVICHQS
Sbjct: 616 CKAVICHQS 624

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106019|ref|XP_002314015.1| predicted protein [Populus trichocarpa] gi|222850423|gb|EEE87970.1| predicted protein [Populus trichocarpa]

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/616 (55%), Positives = 433/616 (70%), Gaps = 52/616 (8%)

Query: 11  LLYSLVALVFFYSYYYHSSLPTSKNLTRTETETFNLIPQNAPSHSSNFTLIIKVLTFNRL 70
           ++++ + L+  +S Y  +    S   T +       I + AP    NFTL+IKVL FNRL
Sbjct: 12  IIFTSIGLIILFSLYQSTHHIPSAEFTSSNNPIKAPIARFAPQ---NFTLLIKVLAFNRL 68

Query: 71  NSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESD-----SRAILRFLDGFEWK 125
           +SLSRCL+SLS+A+Y  D VHLH+++DH A L ++S +  D     SR +L F+DGF+WK
Sbjct: 69  DSLSRCLNSLSSANYGGDTVHLHIHIDHFA-LTNESLNVIDKKLEESRKVLNFVDGFDWK 127

Query: 126 FGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHA 185
           FG+K VHYRT N GLQAQWLEAWWP+SDHEF+F+VEDD+EVSPLFYKF+RGLIVNYYY+ 
Sbjct: 128 FGNKVVHYRTNNVGLQAQWLEAWWPSSDHEFSFIVEDDVEVSPLFYKFVRGLIVNYYYNV 187

Query: 186 PSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEFRLWY 245
            SN +  IYGASLQRPRFVPGKHGNKI LD+ T LFLYQLVGTWGQ+LFP+PWKEFRLWY
Sbjct: 188 -SNFSPFIYGASLQRPRFVPGKHGNKIQLDSETHLFLYQLVGTWGQILFPKPWKEFRLWY 246

Query: 246 DDHKARGIKPFLDGM-------------------------------------RALSVSHR 268
           D HK++GIKP LDGM                                     RALSVSHR
Sbjct: 247 DLHKSKGIKPLLDGMVTNGWYKRIGERIWTPWFIKFIHSRGYFNIYTNFQHERALSVSHR 306

Query: 269 DAGVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREVFPGRVVKSMDDLGTV 328
           DAGVNYGK+AGPDS+LLD SSLDFN+L+MQPLSNLKWYD+CFREV PGRV +++D++G++
Sbjct: 307 DAGVNYGKTAGPDSQLLDGSSLDFNLLEMQPLSNLKWYDYCFREVLPGRVGRTLDEVGSI 366

Query: 329 LPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLYDLARRGHPVID 388
           L +VQ  ++VL+V++FGASD +TRN+LC FER+N +N+I +G  SDFL+DLARRGHPVID
Sbjct: 367 LRTVQEDQSVLLVNIFGASDTITRNMLCHFERLNIRNYILIGPGSDFLFDLARRGHPVID 426

Query: 389 ADQFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDANFLPFSNDLFL 448
           ADQF N  RA + +  Q S A L K +LV  YVIKKCLE  Y + +VDAN L  S     
Sbjct: 427 ADQFFNYHRAQKVMGFQHSSAELMKNILVNAYVIKKCLENGYDSLIVDANMLVLSK--VQ 484

Query: 449 EPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEVANLVDKVSLPRDHRNFANIMAN 508
           E ID  +DFY G+S    FVKSSSS Q++W    L +VA     V    ++ +F  ++  
Sbjct: 485 EFIDPANDFYAGKSLGFFFVKSSSSAQEIWA-GLLKKVAVTKGNVLFQGENTDFVYLVK- 542

Query: 509 LLRQKAGVMIKRVDESKIGLDIGTGSANQSSSAVGKKIVYWSADLGPDRIQKQLEELSLW 568
            L ++ GV I RVDE+ +G+ I   ++NQSS   GKK+ YW A  G D IQK+L+ELSLW
Sbjct: 543 -LLEQNGVRIHRVDEASVGIQIHADTSNQSSLEAGKKMAYWFAGTGVDLIQKRLQELSLW 601

Query: 569 DIDSDSSCKAVICHQS 584
            +D DSSC AV+CHQS
Sbjct: 602 VVDGDSSCSAVVCHQS 617

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224055269|ref|XP_002298453.1| predicted protein [Populus trichocarpa] gi|222845711|gb|EEE83258.1| predicted protein [Populus trichocarpa]

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/630 (55%), Positives = 433/630 (68%), Gaps = 58/630 (9%)

Query: 1   MVGSNQKRHLLL----YSLVALVFFYSYYYHSSLPTSKNL-TRTETETFNLIPQNAPSHS 55
           MVG    RHLLL     S+ A++ F  +     +P    +   T  +T N  PQ  P   
Sbjct: 1   MVGP--PRHLLLPIILTSIGAVILFSLHQSTHPIPNPDFIPINTLIKTPN--PQFTPQ-- 54

Query: 56  SNFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSA----PLADQSSSESD 111
            +FT +IKVL FNRL+SLSRCL+SLSAA+Y  D VHLH+++DH A    P+        +
Sbjct: 55  -DFTFLIKVLAFNRLDSLSRCLNSLSAANYGGDTVHLHIHIDHFALTNEPINVIDKKLEE 113

Query: 112 SRAILRFLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFY 171
           SR +L F+DGF+WKFG+K VHYRT N GLQAQWLEAWWP+SDHEFAF+VEDDLEVSPLFY
Sbjct: 114 SRKVLNFIDGFDWKFGNKVVHYRTNNVGLQAQWLEAWWPSSDHEFAFIVEDDLEVSPLFY 173

Query: 172 KFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQ 231
           KF+RGLIVNYYY+A SN + S+YGASLQRPRFVPGKHGNKIHLD+ T LFLYQLVGTWGQ
Sbjct: 174 KFVRGLIVNYYYNA-SNFSPSVYGASLQRPRFVPGKHGNKIHLDSETHLFLYQLVGTWGQ 232

Query: 232 LLFPQPWKEFRLWYDDHKARGIKPFLDGM------------------------------- 260
           +LFP+PWKEFRLWYD HK++GIKPFLDGM                               
Sbjct: 233 ILFPKPWKEFRLWYDLHKSKGIKPFLDGMVTNGWYKRMGERIWTPWFIKFIYSRGYFNIY 292

Query: 261 ------RALSVSHRDAGVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREVF 314
                 RALSVSHRDAGVNYGK+AGPDS+LLD SSLDFN+L+MQPLSNLKWYD+CFREV 
Sbjct: 293 TNFQHERALSVSHRDAGVNYGKTAGPDSQLLDGSSLDFNLLEMQPLSNLKWYDYCFREVL 352

Query: 315 PGRVVKSMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSD 374
            GR+ +++D++G++L +VQ+  +VL+V++FG S  +TRN+LC  ER+N +N+I +G  SD
Sbjct: 353 SGRIGRTLDEVGSILRTVQKDRSVLLVTIFGESGTITRNMLCHLERLNIRNYILIGPGSD 412

Query: 375 FLYDLARRGHPVIDADQFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWV 434
           FL+DLARRGHPVIDADQF N +RA   +  Q S A L K VLV  YVIKKCLE  Y +  
Sbjct: 413 FLFDLARRGHPVIDADQFFNYLRAQRVMGFQHSSAELMKNVLVNGYVIKKCLEDGYDSLT 472

Query: 435 VDANFLPFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEVANLVDKVS 494
           VDAN L  S     E I+ +SD   G+S    FV+SSSS Q++W  + L +VA  + K S
Sbjct: 473 VDANVLFLSK--VQEFINPSSDMCAGKSLGFFFVRSSSSAQEIWA-DLLKKVAATIGKGS 529

Query: 495 LPRDHRNFANIMANLLRQKAGVMIKRVDESKIGLDIGTGSANQSSSAVGKKIVYWSADLG 554
           L  +  NF   +   L Q  G  I RVDE+ IG+ I   + NQSS   GKK+VYWS D  
Sbjct: 530 LQGESTNFVYFVVKFLEQN-GAGILRVDEASIGIQIRANAFNQSSLEAGKKMVYWSTDTS 588

Query: 555 PDRIQKQLEELSLWDIDSDSSCKAVICHQS 584
            D IQ++L+ELSLW +D DSSC AV+CH S
Sbjct: 589 LDLIQRRLQELSLWVVDGDSSCTAVVCHVS 618

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357514305|ref|XP_003627441.1| hypothetical protein MTR_8g023050 [Medicago truncatula] gi|355521463|gb|AET01917.1| hypothetical protein MTR_8g023050 [Medicago truncatula]

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 333/630 (52%), Positives = 429/630 (68%), Gaps = 54/630 (8%)

Query: 1   MVGSNQKRHLLLYSLVALVFFYSYYYH-SSLPTSKNLTRTETETFNLIPQNAPSH-SSNF 58
           MVG   K+H L    + L+ F  Y +H SSLP+S   +       + I  N  S  S NF
Sbjct: 1   MVGP--KKHFLPIIFITLIAFIFYTFHNSSLPSSITESNPNFTVKSPIQINPNSTISPNF 58

Query: 59  TLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPL--ADQSSSESDSRAIL 116
           T +IKVL FNRL+S+SRCL SL+AADYL DRVHLHVY+DH APL  +D      +S  IL
Sbjct: 59  TFLIKVLAFNRLDSVSRCLRSLAAADYLGDRVHLHVYIDHFAPLNNSDVDLKLIESHRIL 118

Query: 117 RFLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRG 176
            F+D FEWK+G+K VHYRT N GLQAQWLEAWWP SD EFAFVVEDDLEVS L+Y++++ 
Sbjct: 119 DFVDVFEWKYGEKVVHYRTGNVGLQAQWLEAWWPGSDDEFAFVVEDDLEVSSLYYEYVKA 178

Query: 177 LIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQ 236
           LIVN+YY+  SN + SI+GA+LQR RFVPGKHGNK+ LD+ T+LFLYQLVGTWGQ+LFP+
Sbjct: 179 LIVNFYYNG-SNYSPSIFGATLQRARFVPGKHGNKLQLDDQTRLFLYQLVGTWGQILFPK 237

Query: 237 PWKEFRLWYDDHKARGIKPFLDGM------------------------------------ 260
           PWKEFRLWYD +KA+G KPFL+GM                                    
Sbjct: 238 PWKEFRLWYDKNKAKGNKPFLEGMVTTGWYKKMGERIWTPWFIKFIQSHGYYNIYANFLH 297

Query: 261 -RALSVSHRDAGVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREVFPGRVV 319
            RALSVSHRDAGVNYGK+AGPDS+LL+E SLDFNIL+MQPLS+LKW+DFCFREV PGR V
Sbjct: 298 ERALSVSHRDAGVNYGKTAGPDSQLLEERSLDFNILEMQPLSSLKWFDFCFREVLPGRFV 357

Query: 320 KSMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLYDL 379
           +++++LG +L S+Q+Q++V +V+L G SDAV RNLLC FER+N +N+I +   SD L+DL
Sbjct: 358 RNLEELGALLHSMQKQDSVFLVNLLGVSDAVARNLLCHFERLNIRNYILMAPPSDSLFDL 417

Query: 380 ARRGHPVIDADQFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDANF 439
           ARRGHPVI+ DQF++ I     LS Q S     K ++ K YVIKKC+E  Y+ WV+D + 
Sbjct: 418 ARRGHPVINVDQFVSSI-GTNKLSSQGSSFETIKGIVAKAYVIKKCIENEYNTWVLDGSL 476

Query: 440 LPFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEVANLVDKVSLPRDH 499
           L  ++D+ LE  +   DF      +L + KSS S +K+WT  F+ ++  + D +   +D 
Sbjct: 477 L-LTSDVLLESRNPNDDFCVANKLELFYAKSSPSSEKIWTNGFVSKIVAMADSLG-RKDS 534

Query: 500 RN-----FANIMANLLRQKAGVMIKRVDESKIGLDIGTGSANQSSSAVGKKIVYWSADLG 554
            N     F  I+  LL Q  G  I+RVD +  GL IG+G  ++SS    KK+VYWS ++ 
Sbjct: 535 SNQGSLSFVYIVTKLLEQN-GASIRRVDGTSFGLKIGSGGVSKSSLE-DKKLVYWSTEME 592

Query: 555 PDRIQKQLEELSLWDIDSDSSCKAVICHQS 584
            D IQK+LEEL+LW ID++ SC AV+CH+S
Sbjct: 593 LDSIQKRLEELNLWSIDNELSCTAVVCHKS 622

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520166|ref|XP_003528735.1| PREDICTED: uncharacterized protein LOC100775691 [Glycine max]

 Score =  636 bits (1640), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 334/632 (52%), Positives = 436/632 (68%), Gaps = 63/632 (9%)

Query: 1   MVGSNQKRHLLLYSLVALVFFYSY-YYHSSLPTSKNLTRTETETFNLIPQNAPSHSS-NF 58
           MVG   KRH L   L++L  F  Y ++HSSLP+S  L    T TF   P    + SS NF
Sbjct: 1   MVGP--KRHFLPLILISLAAFIFYSFHHSSLPSSI-LESNPTSTF---PNPIRTQSSPNF 54

Query: 59  TLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSS----SESDSRA 114
           T +IKVL FNRL +LSRCL SL+AA YL DRVHLH+++DH AP  D +S       ++  
Sbjct: 55  TFVIKVLAFNRLAALSRCLRSLAAAHYLADRVHLHLHIDHFAP--DNASHVDPKLREAHQ 112

Query: 115 ILRFLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFL 174
           IL F+DGF+WKFG+K VHYRT N GLQAQWLEAWWP+SDHEFAFVVEDDLEVSPL+Y+F+
Sbjct: 113 ILEFVDGFDWKFGEKVVHYRTGNVGLQAQWLEAWWPSSDHEFAFVVEDDLEVSPLYYEFV 172

Query: 175 RGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLF 234
           + LI+N+YY+A SN + SI+G SLQR RFVPGKHGNK+ LD+ T+LFLYQLVGTWGQ+LF
Sbjct: 173 KALIMNFYYNA-SNYSPSIFGVSLQRARFVPGKHGNKLQLDDQTRLFLYQLVGTWGQILF 231

Query: 235 PQPWKEFRLWYDDHKARGIKPFLDGM---------------------------------- 260
           P+PWKEFRLWYD++KA+G KPFL+GM                                  
Sbjct: 232 PKPWKEFRLWYDENKAKGNKPFLEGMVTTGWYKKMGERIWTPWFIKFIQSRGYFNIYTNL 291

Query: 261 ---RALSVSHRDAGVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREVFPGR 317
              RALSVSHRDAGVNYGK+AGPDSKLL+E SLDFNIL++QPL +L+WYDFCFREV PG+
Sbjct: 292 LHERALSVSHRDAGVNYGKTAGPDSKLLEEKSLDFNILEVQPLRSLRWYDFCFREVHPGK 351

Query: 318 VVKSMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLY 377
           V  ++++LG++L S+Q+Q++V +V+LFG SDA++RNLLC FER++ +N+I +G  SD L+
Sbjct: 352 VATNLEELGSLLHSLQKQDSVFLVNLFGVSDAISRNLLCHFERLDIRNYILMGPPSDSLF 411

Query: 378 DLARRGHPVIDADQFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDA 437
           DLARRGHPVI+ D+F++ +      + Q       K +L K Y IKKC+E RY+ WV+D 
Sbjct: 412 DLARRGHPVINVDKFISSV-GLSKFTSQGLSFETIKGILAKTYAIKKCIENRYNTWVMDG 470

Query: 438 NFLPFSNDLFL-EPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEVA----NLVDK 492
           + L  ++DLFL E  D+  DF+   + +L + KSSSS QK+W   F+ +V     +L  K
Sbjct: 471 SML-LTSDLFLSESEDSNGDFFVANNLELFYAKSSSSSQKIWVDGFVSKVVAMAESLAGK 529

Query: 493 VSLPRDHRNFANIMANLLRQKAGVMIKRVDESKIGLDIGTGSANQSSSAVGKKIVYWSAD 552
            S      +F  ++  LL Q  G  I+RVDE+     IG+GS    +S   KK+VYWS++
Sbjct: 530 DSATHGSLSFVYVVIKLLEQN-GARIRRVDENSFATKIGSGS---ETSLRDKKLVYWSSE 585

Query: 553 LGPDRIQKQLEELSLWDIDSDSSCKAVICHQS 584
           +  + IQK L+E +LW IDSD SC AV+CH+S
Sbjct: 586 MELNSIQKWLDEFNLWSIDSDLSCTAVVCHKS 617

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444839|ref|XP_004140181.1| PREDICTED: uncharacterized protein LOC101202835 [Cucumis sativus] gi|449524408|ref|XP_004169215.1| PREDICTED: uncharacterized LOC101202835 [Cucumis sativus]

 Score =  623 bits (1606), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 328/622 (52%), Positives = 414/622 (66%), Gaps = 60/622 (9%)

Query: 1   MVGSNQKRHLL---LYSLVALVFFYSYYYHSSLPTSKNLTRTETETFNLIPQNAPSHSSN 57
           MVG   KRH L   L   V+++FF++++Y S  P+  +    +   F L  +     +S 
Sbjct: 1   MVG--HKRHFLPLFLLVSVSILFFFTHFYSSIPPSFPSNPNPD---FALSRRITDPKTSG 55

Query: 58  FTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILR 117
           FTLI+KVL +NRL+S+SRCL S++ ADYL+DRVHLHVY+DH  P  D     ++S  IL+
Sbjct: 56  FTLIVKVLAYNRLDSVSRCLRSIANADYLSDRVHLHVYIDH-YPNDDAHIKLNESHRILQ 114

Query: 118 FLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGL 177
           F+D F W FG+K VHYRT N GLQAQWLEAWWP+SD+EFAFVVEDDLE+SPL+YKFLR L
Sbjct: 115 FVDQFAWNFGEKIVHYRTGNVGLQAQWLEAWWPSSDNEFAFVVEDDLELSPLYYKFLRSL 174

Query: 178 IVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQP 237
           IVNYYY+  SN   SIYGASLQRPRFVPGKHGNKI LD GT++FLYQ+VGTWGQLLFP+P
Sbjct: 175 IVNYYYNT-SNYDPSIYGASLQRPRFVPGKHGNKIKLDEGTRMFLYQIVGTWGQLLFPRP 233

Query: 238 WKEFRLWYDDHKARGIKPFLDGM------------------------------------- 260
           WKEFRLWYD+HKA GIKP LDGM                                     
Sbjct: 234 WKEFRLWYDEHKAMGIKPLLDGMVTTGWYKKLGERIWTPWFIKFIHSRGYFNIYTNFLHE 293

Query: 261 RALSVSHRDAGVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREVFPGRVVK 320
           RALS SHRDAGVNYGK+AGPDS LLDESSLDFN+L+M+P SNLKWYDFCFREV P R+VK
Sbjct: 294 RALSTSHRDAGVNYGKTAGPDSHLLDESSLDFNLLEMKPRSNLKWYDFCFREVVPQRIVK 353

Query: 321 SMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLYDLA 380
           S  +L +VL SVQ+ E +++VS+FG S++  RN LC FER+N +N+I LG  S+ L DL 
Sbjct: 354 SKSELVSVLHSVQKHENIVIVSVFGVSESTMRNFLCHFERLNIKNYILLGHESELLNDLT 413

Query: 381 RRGHPVIDADQFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDANFL 440
           RRGHPVI ADQFL  +   +  + + + + L K VL K YVIK CLE  YS  +VD N L
Sbjct: 414 RRGHPVIYADQFLKTLITSKFTTFEGTTSELVKLVLAKFYVIKSCLELGYSPGLVDGNML 473

Query: 441 PFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEVANLVDKVSLPRDHR 500
             + + F + +   +D   G+S +L F+KSSSS QKMW  + + E   ++D         
Sbjct: 474 FVNGNTFTD-LSLANDIVSGQSYELFFIKSSSSSQKMWASHMVVEAEAILD--------- 523

Query: 501 NFANIMANLLRQKAGVMIKRVDESKIGLDIGTGSANQSSSAVGKKIVYWSADLGPDRIQK 560
            F  I   LL +K GV  K  +E   G++IG   AN +S   GK++V+W A+   + +QK
Sbjct: 524 -FVGIATKLL-EKHGVKFKTAEEMSFGVNIGNNPAN-TSLGDGKRLVFWPAETSNNDVQK 580

Query: 561 QLEELSLWDIDSDSSCKAVICH 582
           +LEE+  W ID D SCKAV C+
Sbjct: 581 RLEEVGFWIIDGDLSCKAVYCN 602

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297807275|ref|XP_002871521.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297317358|gb|EFH47780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 309/574 (53%), Positives = 381/574 (66%), Gaps = 58/574 (10%)

Query: 58  FTLIIKVLTFNRLNSLSRCLHSLSAADYLTD----RVHLHVYVDH------SAPLADQSS 107
           FT +IKVLTFNRL SLSRCL SLSAADY       R+HLHVY+DH        P+ D  +
Sbjct: 69  FTFLIKVLTFNRLYSLSRCLRSLSAADYGVSGDKGRIHLHVYIDHFNLARNDTPVEDNLN 128

Query: 108 SESDSRAILRFLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVS 167
           S   +R IL F+D FEW+FG+K VHYRT NAGLQAQWLEAWWP+SDHEFAFVVEDDLEVS
Sbjct: 129 S---AREILGFVDRFEWRFGEKVVHYRTDNAGLQAQWLEAWWPSSDHEFAFVVEDDLEVS 185

Query: 168 PLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVG 227
           PL+Y  L  LI  YYY   SN   SIYGASLQRPRFVPGKHGNK+H+D  T L LYQLVG
Sbjct: 186 PLYYGILERLIHKYYYDT-SNFNPSIYGASLQRPRFVPGKHGNKLHVDPKTNLLLYQLVG 244

Query: 228 TWGQLLFPQPWKEFRLWYDDHKARGIKPFLDGM--------------------------- 260
           TWGQLLFP+PWKEFRLWYD+HK+   KPFLDGM                           
Sbjct: 245 TWGQLLFPKPWKEFRLWYDEHKSNAKKPFLDGMVTNGWYKRLGERIWTPWFIKFVHSRGY 304

Query: 261 ----------RALSVSHRDAGVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCF 310
                      ALSVSHRDAGVNYGK+AGPDS+LL++S+L  + LK+QPLSNLKWYDFCF
Sbjct: 305 FNIYTSFPNEGALSVSHRDAGVNYGKTAGPDSQLLNKSALSSDSLKLQPLSNLKWYDFCF 364

Query: 311 REVFPGRVVKSMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLG 370
            EV PGRVV+++++LGT+LPSVQ  +T+++VSL+GA    TRNLLC FE++N+QNHIF+G
Sbjct: 365 SEVVPGRVVRNLNELGTILPSVQSDKTIILVSLYGAEKMFTRNLLCHFEKLNTQNHIFIG 424

Query: 371 SHSDFLYDLARRGHPVIDADQFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRY 430
             S+  YDL+RRGHPVIDAD  L+ +     +  ++S     KE L   +V+KKCLE  Y
Sbjct: 425 PSSELFYDLSRRGHPVIDADMLLDKL-----IKSKTSYPNSVKEALGNAFVVKKCLELGY 479

Query: 431 SAWVVDANFLPFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEVANLV 490
           S W   +N L       L+ + A  D Y  ESS +L V+SSS  QK+W+  FL+ + +  
Sbjct: 480 STWAFSSNSLLVDKGPLLDRVSAEYDIYIRESSGILIVQSSSVTQKLWSNEFLHSITSAA 539

Query: 491 DKVSLPRDHRNFANIMANLLRQKAGVMIKRVDESKIGLDIGTGSANQSSSAVGKKIVYWS 550
            K        ++ +++  L+ QK G  IK V+   I  +    S NQS    GK +VYWS
Sbjct: 540 TKNPSLNQSLDYIHLVKELVEQK-GKRIKTVETMDIAENTNANSVNQSLGD-GKPVVYWS 597

Query: 551 ADLGPDRIQKQLEELSLWDIDSDSSCKAVICHQS 584
             + P+ I+ +LEEL+LW ID D SCKAV+CH S
Sbjct: 598 PKVAPNMIRSKLEELNLWLIDDDLSCKAVVCHNS 631

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15239915|ref|NP_196787.1| uncharacterized protein [Arabidopsis thaliana] gi|9759393|dbj|BAB10044.1| unnamed protein product [Arabidopsis thaliana] gi|21703127|gb|AAM74504.1| AT5g12260/MXC9_22 [Arabidopsis thaliana] gi|34365563|gb|AAQ65093.1| At5g12260/MXC9_22 [Arabidopsis thaliana] gi|332004401|gb|AED91784.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 313/571 (54%), Positives = 388/571 (67%), Gaps = 59/571 (10%)

Query: 58  FTLIIKVLTFNRLNSLSRCLHSLSAADYLTD----RVHLHVYVDHSAPLADQSSSESD-- 111
           FT +IKVLTFNRL+SLSRCL SLSAADY       R+HLHVY+DH     + +  E +  
Sbjct: 69  FTFLIKVLTFNRLHSLSRCLRSLSAADYGVSGDRGRIHLHVYIDHFNLARNDTPVEDNLQ 128

Query: 112 -SRAILRFLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLF 170
            +R IL F+D FEW+FG+K VHYRT NAGLQAQWLEAWWP SDHEFAFVVEDDLEVSPL+
Sbjct: 129 IAREILGFVDRFEWRFGEKVVHYRTDNAGLQAQWLEAWWPISDHEFAFVVEDDLEVSPLY 188

Query: 171 YKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWG 230
           Y  L  LI+ YYY   SN   SIYGASLQRPRFVPGKHGNK+H+D  T L LYQLVGTWG
Sbjct: 189 YGILERLILKYYYDT-SNFNPSIYGASLQRPRFVPGKHGNKLHVDPKTNLILYQLVGTWG 247

Query: 231 QLLFPQPWKEFRLWYDDHKARGIKPFLDGM------------------------------ 260
           QLLFP+PWKEFRLWYD+HK++G KPFLDGM                              
Sbjct: 248 QLLFPKPWKEFRLWYDEHKSKGKKPFLDGMVSNGWYKRLGERIWTPWFIKFVHSRGYFNI 307

Query: 261 -------RALSVSHRDAGVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREV 313
                   ALSVSHRDAGVNYG++AGPDS+LL++SSL  + LK+QPLSNLKWYDFCF EV
Sbjct: 308 YTSFPNEGALSVSHRDAGVNYGRTAGPDSQLLNKSSLSSDSLKLQPLSNLKWYDFCFSEV 367

Query: 314 FPGRVVKSMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHS 373
            PGRVV+++++LGT+LPSVQR++T+++VSL+GA     RNLLC FE++N QNHIF+G  S
Sbjct: 368 VPGRVVRNLNELGTILPSVQREKTIILVSLYGADKMFIRNLLCHFEKLNIQNHIFIGPSS 427

Query: 374 DFLYDLARRGHPVIDADQFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAW 433
           +  +DL+RRGHPVIDAD FLN +     +  ++S     KE L   YV+KKCLE  YS W
Sbjct: 428 ELFHDLSRRGHPVIDADMFLNKL-----IKSKTSYPNSVKEALGNSYVVKKCLELGYSTW 482

Query: 434 VVDANFLPFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEVANLVDKV 493
              +N L       L+ + +  D Y GESS +L V+SSS  QK+W+  FL+ +A+     
Sbjct: 483 AFSSNSLLVDKGRLLDRVSSDYDIYIGESSGILIVQSSSVTQKLWSNEFLHSIAS----- 537

Query: 494 SLPRDHRNFANIMANLLRQKAGVMIKRVDESKIGLDIGTGSANQSSSAVGKKIVYWSADL 553
             P+   +F +++  L+ QK G  IK V+   I  +    S NQS    GK +VYWS ++
Sbjct: 538 --PKQSLDFIHLVKELVEQK-GKRIKTVETMNIAENTNANSVNQSLGD-GKPVVYWSPEV 593

Query: 554 GPDRIQKQLEELSLWDIDSDSSCKAVICHQS 584
            P+ I+ +LEELSLW ID D SCKAV+CH S
Sbjct: 594 APNMIRSKLEELSLWLIDDDLSCKAVVCHSS 624

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115436008|ref|NP_001042762.1| Os01g0283000 [Oryza sativa Japonica Group] gi|13486718|dbj|BAB39953.1| OSJNBa0004B13.7 [Oryza sativa Japonica Group] gi|15408821|dbj|BAB64213.1| unknown protein [Oryza sativa Japonica Group] gi|113532293|dbj|BAF04676.1| Os01g0283000 [Oryza sativa Japonica Group] gi|125569948|gb|EAZ11463.1| hypothetical protein OsJ_01332 [Oryza sativa Japonica Group]

 Score =  540 bits (1391), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 277/567 (48%), Positives = 365/567 (64%), Gaps = 51/567 (8%)

Query: 58  FTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILR 117
           F+L+IKVL ++R   L RCL SL+AADY  DRV LHV VDH  P    ++S   SR IL 
Sbjct: 50  FSLLIKVLAYDRPGPLRRCLRSLAAADYAGDRVALHVLVDHPRP----NASLDASREILA 105

Query: 118 FLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGL 177
             D   W  G+K VHYR ANAGLQAQW+EAWWP SD EFAFVVEDDLEVSPL+Y+FL+ L
Sbjct: 106 EADALRWPHGEKRVHYRAANAGLQAQWIEAWWPGSDDEFAFVVEDDLEVSPLYYRFLKRL 165

Query: 178 IVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQP 237
           ++ YYY    N +  ++GASLQRPRFV GKHGNKI LD+ T LFLYQ+VGTWGQLLFP+P
Sbjct: 166 VMAYYYDR-ENYSPYVFGASLQRPRFVAGKHGNKIQLDSETHLFLYQMVGTWGQLLFPKP 224

Query: 238 WKEFRLWYDDHKARGIKPFLDGM------------------------------------- 260
           WKEFRLWYD+HK++GIKP L+GM                                     
Sbjct: 225 WKEFRLWYDEHKSKGIKPILEGMKTTGWYKKMGERIWTPWFIKFVHSCGYFNFYTNFLKE 284

Query: 261 RALSVSHRDAGVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREVFPGRVVK 320
           RALSVSHRDAGVNYG+S GPDS LLD  +LDFN+ ++QPL+ LKWYDFCF EV PGRV++
Sbjct: 285 RALSVSHRDAGVNYGRSVGPDSTLLDGKNLDFNLWELQPLNKLKWYDFCFAEVLPGRVIR 344

Query: 321 SMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLYDLA 380
              +LG+VL SVQ +  V+++SL+     + RNL+C  E+   +N+IFL  +++FL DLA
Sbjct: 345 KFSELGSVLKSVQLENNVVLISLYSLEQRIARNLICYLEKSGMRNYIFLVDNTEFLDDLA 404

Query: 381 RRGHPVIDADQFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDANFL 440
            RGHPVIDA   L  I+   S S+ S D    KE++VK YVIK CL+  Y+ WV++ N +
Sbjct: 405 HRGHPVIDAISLLQSIKM--SSSIYSDD--FVKEIVVKAYVIKNCLDLGYNLWVLNGNTI 460

Query: 441 PFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEVAN----LVDKVSLP 496
              + L  EP D + DF+  ES  L+F++ S S +K W +  +  +A+         S  
Sbjct: 461 SLGSKLN-EPSDQSVDFFAAESVDLMFLRGSQSSKKTWNELDILRMADGMMSSKSGFSSS 519

Query: 497 RDHRNFANIMANLLRQKAGVMIKRVDESKIGLDIGTGSANQSSSAVGKKIVYWSADLGPD 556
            +H+NF  ++  +L     V + ++DE  + +++G  ++N+S S    K+++WS  +  D
Sbjct: 520 LEHKNFVRVLTGVLGNNGAVRLGKLDEEIMAVELGPNTSNRSLSEGHCKVLFWSHSMTSD 579

Query: 557 RIQKQLEELSLWDIDSDSSCKAVICHQ 583
            +Q QLE   LW IDSDSSC AV+C Q
Sbjct: 580 SVQSQLENRGLWLIDSDSSCSAVVCGQ 606

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	584
TAIR|locus:2177013	624	AT5G12260 "AT5G12260" [Arabido	0.613	0.573	0.446	5.9e-161
TAIR|locus:2175786	668	AT5G60700 "AT5G60700" [Arabido	0.289	0.252	0.307	6.7e-16

TAIR|locus:2177013 AT5G12260 "AT5G12260" [Arabidopsis thaliana (taxid:3702)]

 Score = 806 (288.8 bits), Expect = 5.9e-161, Sum P(2) = 5.9e-161
 Identities = 167/374 (44%), Positives = 229/374 (61%)

Query:   213 HLDNGTQLFLYQLVGT-WGQLLFPQPWKEFRLWYDDHKAR-GIKPFLDGMRALSVSHRDA 270
             H   G + FL  +V   W + L  + W  + + +   +    I        ALSVSHRDA
Sbjct:   265 HKSKGKKPFLDGMVSNGWYKRLGERIWTPWFIKFVHSRGYFNIYTSFPNEGALSVSHRDA 324

Query:   271 GVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREVFPGRVVKSMDDLGTVLP 330
             GVNYG++AGPDS+LL++SSL  + LK+QPLSNLKWYDFCF EV PGRVV+++++LGT+LP
Sbjct:   325 GVNYGRTAGPDSQLLNKSSLSSDSLKLQPLSNLKWYDFCFSEVVPGRVVRNLNELGTILP 384

Query:   331 SVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLYDLARRGHPVIDAD 390
             SVQR++T+++VSL+GA     RNLLC FE++N QNHIF+G  S+  +DL+RRGHPVIDAD
Sbjct:   385 SVQREKTIILVSLYGADKMFIRNLLCHFEKLNIQNHIFIGPSSELFHDLSRRGHPVIDAD 444

Query:   391 QFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDANFLPFSNDLFLEP 450
              FLN +     +  ++S     KE L   YV+KKCLE  YS W   +N L       L+ 
Sbjct:   445 MFLNKL-----IKSKTSYPNSVKEALGNSYVVKKCLELGYSTWAFSSNSLLVDKGRLLDR 499

Query:   451 IDATSDFYYGEXXXXXXXXXXXXXQKMWTKNFLYEVANLVDKVSLPRDHRNFANIMANLL 510
             + +  D Y GE             QK+W+  FL+ +A+       P+   +F +++  L+
Sbjct:   500 VSSDYDIYIGESSGILIVQSSSVTQKLWSNEFLHSIAS-------PKQSLDFIHLVKELV 552

Query:   511 RQKAGVMIKRVDESKIGLDIGTGSANQSSSAVGKKIVYWSADLGPDRIQKQLEELSLWDI 570
              QK G  IK V+   I  +    S NQS    GK +VYWS ++ P+ I+ +LEELSLW I
Sbjct:   553 EQK-GKRIKTVETMNIAENTNANSVNQSLGD-GKPVVYWSPEVAPNMIRSKLEELSLWLI 610

Query:   571 DSDSSCKAVICHQS 584
             D D SCKAV+CH S
Sbjct:   611 DDDLSCKAVVCHSS 624

GO:0008150 "biological_process" evidence=ND

GO:0007059 "chromosome segregation" evidence=RCA

GO:0007129 "synapsis" evidence=RCA

GO:0007131 "reciprocal meiotic recombination" evidence=RCA

GO:0042138 "meiotic DNA double-strand break formation" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2175786 AT5G60700 "AT5G60700" [Arabidopsis thaliana (taxid:3702)]

 Score = 231 (86.4 bits), Expect = 6.7e-16, P = 6.7e-16
 Identities = 59/192 (30%), Positives = 97/192 (50%)

Query:    62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDG 121
             + ++T NR  SL R L SLS A YL D + L   +D          S+ D   I   +  
Sbjct:   337 VNIITQNRAQSLLRLLRSLSNAYYLGDEISLSFNMD----------SKVDEETI-NVVST 385

Query:   122 FEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNY 181
             F+W  G K +  R    GL     E+W+P SD +F  ++EDD+EVSP ++ +++  ++ Y
Sbjct:   386 FDWPHGPKTLRRRIIQGGLIRAVSESWYPASDDDFGLLLEDDIEVSPYYFLWIKYALLAY 445

Query:   182 YYHA----PSNLTRSIYGASL-----QRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQL 232
             +Y      P   + S+Y   +     +RP++ P     +IH       +L+QL  +WG +
Sbjct:   446 HYDPQVSFPELSSISLYTPKIVEVVKERPKWNPTDFFKQIHPHTP---YLHQLPCSWGAV 502

Query:   233 LFPQPWKEFRLW 244
              FP+ W+EF ++
Sbjct:   503 FFPKQWREFYVY 514


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.416    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      584       571   0.00080  120 3  11 22  0.37    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  633 (67 KB)
  Total size of DFA:  347 KB (2172 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  44.80u 0.19s 44.99t   Elapsed:  00:00:02
  Total cpu time:  44.80u 0.19s 44.99t   Elapsed:  00:00:02
  Start:  Mon May 20 15:25:46 2013   End:  Mon May 20 15:25:48 2013

GO:0005575 "cellular_component" evidence=ND

GO:0009058 "biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00022805001 SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (633 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	584
cd02514	334	GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es	99.86
PF03071	434	GNT-I: GNT-I family; InterPro: IPR004139 The biosy	99.79
KOG1413	411	consensus N-acetylglucosaminyltransferase I [Carbo	98.83
PF00535	169	Glycos_transf_2: Glycosyl transferase family 2; In	98.55
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	98.36
cd06423	180	CESA_like CESA_like is the cellulose synthase supe	98.14
PRK11204	420	N-glycosyltransferase; Provisional	98.06
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	98.01
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	97.95
cd04179	185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	97.93
cd04184	202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	97.89
cd06442	224	DPM1_like DPM1_like represents putative enzymes si	97.86
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	97.86
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	97.85
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	97.82
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	97.78
TIGR03111	439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	97.78
PRK14583	444	hmsR N-glycosyltransferase; Provisional	97.78
cd06420	182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	97.72
cd06437	232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	97.7
cd06434	235	GT2_HAS Hyaluronan synthases catalyze polymerizati	97.69
PF03407	212	Nucleotid_trans: Nucleotide-diphospho-sugar transf	97.65
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	97.64
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	97.64
cd06438	183	EpsO_like EpsO protein participates in the methano	97.64
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	97.62
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	97.62
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	97.6
cd06427	241	CESA_like_2 CESA_like_2 is a member of the cellulo	97.6
PLN02726	243	dolichyl-phosphate beta-D-mannosyltransferase	97.57
cd00761	156	Glyco_tranf_GTA_type Glycosyltransferase family A	97.54
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	97.5
PF05060	356	MGAT2: N-acetylglucosaminyltransferase II (MGAT2);	97.5
cd06435	236	CESA_NdvC_like NdvC_like proteins in this family a	97.4
cd06436	191	GlcNAc-1-P_transferase N-acetyl-glucosamine transf	97.33
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	97.23
PRK10073	328	putative glycosyl transferase; Provisional	97.22
PTZ00260	333	dolichyl-phosphate beta-glucosyltransferase; Provi	97.2
cd04187	181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	97.18
COG0463	291	WcaA Glycosyltransferases involved in cell wall bi	97.17
cd04188	211	DPG_synthase DPG_synthase is involved in protein N	97.11
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	97.11
PRK10018	279	putative glycosyl transferase; Provisional	97.11
cd02522	221	GT_2_like_a GT_2_like_a represents a glycosyltrans	97.08
COG1216	305	Predicted glycosyltransferases [General function p	96.96
cd02511	229	Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4	96.87
TIGR03030	713	CelA cellulose synthase catalytic subunit (UDP-for	96.87
cd04191	254	Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon	96.65
cd06913	219	beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran	96.61
PRK11498	852	bcsA cellulose synthase catalytic subunit; Provisi	96.57
PRK10063	248	putative glycosyl transferase; Provisional	96.41
PRK10714	325	undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi	96.35
PRK05454	691	glucosyltransferase MdoH; Provisional	96.31
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	96.25
cd04190	244	Chitin_synth_C C-terminal domain of Chitin Synthas	96.12
COG1215	439	Glycosyltransferases, probably involved in cell wa	95.69
PRK13915	306	putative glucosyl-3-phosphoglycerate synthase; Pro	95.28
KOG2791	455	consensus N-acetylglucosaminyltransferase [Carbohy	94.25
PRK14716	504	bacteriophage N4 adsorption protein B; Provisional	93.4
PF04666	297	Glyco_transf_54: N-Acetylglucosaminyltransferase-I	92.65
PF09258	247	Glyco_transf_64: Glycosyl transferase family 64 do	92.16
PF10111	281	Glyco_tranf_2_2: Glycosyltransferase like family 2	92.11
KOG2978	238	consensus Dolichol-phosphate mannosyltransferase [	91.2
PF01755	200	Glyco_transf_25: Glycosyltransferase family 25 (LP	89.05
PRK11234	727	nfrB bacteriophage N4 adsorption protein B; Provis	87.58
KOG2977	323	consensus Glycosyltransferase [General function pr	83.64

>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides

Probab=99.86  E-value=5e-22  Score=206.27  Aligned_cols=159  Identities=18%  Similarity=0.254  Sum_probs=112.1

Q ss_pred             EEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCC--
Q 044432           60 LIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTAN--  137 (584)
Q Consensus        60 I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~N--  137 (584)
                      +||+|++||||++|+|+|+||.++.+.....+|+|+.||++.+     ..+.++...+-++.++++      ..+..|  
T Consensus         2 ~PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~-----~~~~v~~~~~~i~~i~~~------~~~~~~~~   70 (334)
T cd02514           2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEE-----VADVAKSFGDGVTHIQHP------PISIKNVN   70 (334)
T ss_pred             cCEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchH-----HHHHHHhhccccEEEEcc------cccccccC
Confidence            6999999999999999999999988677788999999998521     112111110011222221      122333  


Q ss_pred             --------cchhHHHhhhc-cCCC--CCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEeecCCCCCC
Q 044432          138 --------AGLQAQWLEAW-WPTS--DHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPG  206 (584)
Q Consensus       138 --------lGLa~sIIEgw-yPts--~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISLY~P~f~~~  206 (584)
                              .+++.+...|. +..+  ++++|||||||+++||+||.||+++|..|+.+      ++|++||+|+..   +
T Consensus        71 ~~~~~~~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D------~~v~~ISa~Ndn---G  141 (334)
T cd02514          71 PPHKFQGYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQATLPLLEED------PSLWCISAWNDN---G  141 (334)
T ss_pred             cccccchhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHHHHHHHHhcC------CCEEEEEeeccC---C
Confidence                    23455433342 2222  48999999999999999999999999999998      499999999852   1


Q ss_pred             CCCCcccCCC-CCCceeeecCCcchhhcCccchHHH
Q 044432          207 KHGNKIHLDN-GTQLFLYQLVGTWGQLLFPQPWKEF  241 (584)
Q Consensus       207 k~~~~i~~d~-~~d~FL~Q~PsSWGwatw~d~WkeF  241 (584)
                         .....+. +...|+....++|||++|++.|+++
T Consensus       142 ---~~~~~~~~~~~lyrs~ff~glGWml~r~~W~e~  174 (334)
T cd02514         142 ---KEHFVDDTPSLLYRTDFFPGLGWMLTRKLWKEL  174 (334)
T ss_pred             ---cccccCCCcceEEEecCCCchHHHHHHHHHHHh
Confidence               1111111 3457777888999999999999987

Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.

>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.79  E-value=2e-19  Score=192.16  Aligned_cols=166  Identities=16%  Similarity=0.194  Sum_probs=95.8

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHH-HHH---hhccccC-CCceEE
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAI-LRF---LDGFEWK-FGDKFV  131 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrel-lk~---L~gF~WP-~g~vtI  131 (584)
                      ...+||+|||||||++|+|||+||.+++..+...+|+|+.||...      .+   .++ ..+   +..++.| +.++++
T Consensus        92 ~~~~pVlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~------~~---~~vi~~y~~~v~~i~~~~~~~i~~  162 (434)
T PF03071_consen   92 EPVIPVLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDE------EV---AEVIKSYGDQVTYIQHPDFSPITI  162 (434)
T ss_dssp             -----EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-H------HH---HHHHHGGGGGSEEEE-S--S----
T ss_pred             CCcceEEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEEecCCcH------HH---HHHHHHhhhhheeeecCCcCCcee
Confidence            445999999999999999999999998876677899999999741      12   222 222   2222233 223333


Q ss_pred             EeecCC----cchhHHHhhhc-cC--CCCCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEeecCCCC
Q 044432          132 HYRTAN----AGLQAQWLEAW-WP--TSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFV  204 (584)
Q Consensus       132 i~R~~N----lGLa~sIIEgw-yP--ts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISLY~P~f~  204 (584)
                      ..+..+    .+++++...+. ..  ...+++|||||||+++||+||.||+.++..|..|      ++||+||+|+-.-.
T Consensus       163 ~~~~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~~D------~sl~ciSawNdnG~  236 (434)
T PF03071_consen  163 PPKEKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLPLLEND------PSLWCISAWNDNGK  236 (434)
T ss_dssp             -TT-GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHHHHHH-------TTEEEEES--TT-B
T ss_pred             CcccccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHHHHhcC------CCeEEEEccccCCc
Confidence            332212    35677776553 11  2258899999999999999999999999998887      59999999986411


Q ss_pred             CCCCCCcccCCCCCCceeeecCCcchhhcCccchHHH
Q 044432          205 PGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEF  241 (584)
Q Consensus       205 ~~k~~~~i~~d~~~d~FL~Q~PsSWGwatw~d~WkeF  241 (584)
                      .    ..++...+...|..-+-.+|||++|++.|.|+
T Consensus       237 ~----~~~~~~~~~~lyRsdffpglGWml~r~~w~el  269 (434)
T PF03071_consen  237 E----HFVDDSRPSLLYRSDFFPGLGWMLTRELWDEL  269 (434)
T ss_dssp             G----GGS-TT-TT-EEEESS---SSEEEEHHHHHHH
T ss_pred             c----ccccCCCccceEecccCCchHHHhhHHHHHhh
Confidence            1    11221123445666677899999999999874

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.

>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]

Probab=98.83  E-value=2e-08  Score=105.88  Aligned_cols=167  Identities=17%  Similarity=0.231  Sum_probs=106.7

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhc---cccCCC---ceE
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDG---FEWKFG---DKF  130 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~g---F~WP~g---~vt  130 (584)
                      ...|||+||+.|||+.++|+++.|-+..+.+..-+++|.-|+.+.      .|.  .+++.+-+.   ..-|.+   +++
T Consensus        66 ~~v~pvvVf~csR~~~lr~~v~kll~yrPsaekfpiiVSQD~~~e------~vk--~~~~~~g~~v~~i~~~~h~~~ei~  137 (411)
T KOG1413|consen   66 PPVIPVVVFACSRADALRRHVKKLLEYRPSAEKFPIIVSQDCEKE------AVK--KKLLSYGSDVSHIQHPMHLKDEIS  137 (411)
T ss_pred             CCceeEEEEecCcHHHHHHHHHHHHHhCcchhhcCEEEeccCCcH------HHH--HHHHHhccchhhhcCccccccccc
Confidence            455999999999999999999999998877777899999999752      233  233333322   223322   333


Q ss_pred             EEeecCC-cch---hHHHhhh----ccCCCCCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEeecCC
Q 044432          131 VHYRTAN-AGL---QAQWLEA----WWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPR  202 (584)
Q Consensus       131 Ii~R~~N-lGL---a~sIIEg----wyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISLY~P~  202 (584)
                      |-.|... .|+   +++..=+    |. ...++++|+.|||+.++|+||.|+..+.-.-+.+      ++||++|.++-.
T Consensus       138 v~~~~~k~~~Yy~IarHYkwAL~q~F~-~~~~s~vii~eDDl~iapDFF~YF~~t~~llk~D------~siwcvsaWNDN  210 (411)
T KOG1413|consen  138 VPPRHKKFNAYYKIARHYKWALNQLFI-VFRESRVIITEDDLNIAPDFFSYFRNTIILLKGD------PSIWCVSAWNDN  210 (411)
T ss_pred             cCCcccccchhHHHHHHHHHHHhhHHh-hcCCceeEEecchhhhhhHHHHHHHHHHHHHhcC------CceEEeeeeccC
Confidence            3333332 122   2222111    11 2258999999999999999999999886554444      799999999763


Q ss_pred             CCCCCCCCcccCCCCCCceeeecCCcchhhcCccchHHHH
Q 044432          203 FVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEFR  242 (584)
Q Consensus       203 f~~~k~~~~i~~d~~~d~FL~Q~PsSWGwatw~d~WkeF~  242 (584)
                      -.    ...+....+.-.|-.-+----||..-++.|.|+-
T Consensus       211 Gk----~~~Id~~~~~~lYRtDFFpGLGWml~~~~W~ELs  246 (411)
T KOG1413|consen  211 GK----KQTIDSTRPSLLYRTDFFPGLGWMLTKKLWEELS  246 (411)
T ss_pred             CC----cccccccccchhhhccccccchHHHHHHHHHhhC
Confidence            11    1112211122222222223579999999999975

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.55  E-value=5.2e-07  Score=77.94  Aligned_cols=106  Identities=20%  Similarity=0.183  Sum_probs=79.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHH-HHhhccccCCCceEEEeecCCcc
Q 044432           61 IIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAIL-RFLDGFEWKFGDKFVHYRTANAG  139 (584)
Q Consensus        61 ~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrell-k~L~gF~WP~g~vtIi~R~~NlG  139 (584)
                      .|++.+|||++.|.|+|+||.+.  .....+++|--|++.++         +.+++ ++.+    ....++++++++|.|
T Consensus         1 Svvip~~n~~~~l~~~l~sl~~q--~~~~~eiivvdd~s~d~---------~~~~~~~~~~----~~~~i~~i~~~~n~g   65 (169)
T PF00535_consen    1 SVVIPTYNEAEYLERTLESLLKQ--TDPDFEIIVVDDGSTDE---------TEEILEEYAE----SDPNIRYIRNPENLG   65 (169)
T ss_dssp             EEEEEESS-TTTHHHHHHHHHHH--SGCEEEEEEEECS-SSS---------HHHHHHHHHC----CSTTEEEEEHCCCSH
T ss_pred             CEEEEeeCCHHHHHHHHHHHhhc--cCCCEEEEEeccccccc---------cccccccccc----ccccccccccccccc
Confidence            38899999999999999999997  23466888888887422         12333 3333    235899999999999


Q ss_pred             hhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHhhc
Q 044432          140 LQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYY  182 (584)
Q Consensus       140 La~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~  182 (584)
                      ++.++-.|+--. ..+++++++||.++.|.|+.-+..++.++.
T Consensus        66 ~~~~~n~~~~~a-~~~~i~~ld~D~~~~~~~l~~l~~~~~~~~  107 (169)
T PF00535_consen   66 FSAARNRGIKHA-KGEYILFLDDDDIISPDWLEELVEALEKNP  107 (169)
T ss_dssp             HHHHHHHHHHH---SSEEEEEETTEEE-TTHHHHHHHHHHHCT
T ss_pred             cccccccccccc-ceeEEEEeCCCceEcHHHHHHHHHHHHhCC
Confidence            999888885222 355999999999999999999999987743

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=98.36  E-value=4.3e-06  Score=73.14  Aligned_cols=101  Identities=21%  Similarity=0.231  Sum_probs=77.1

Q ss_pred             EEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcchh
Q 044432           62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGLQ  141 (584)
Q Consensus        62 IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlGLa  141 (584)
                      |++++|||++.+.|+|+||.+..+  ....++|..|++.++         +.+   .+..+ .  ..++++....|.|++
T Consensus         1 vii~~~~~~~~l~~~l~sl~~~~~--~~~~iiivdd~s~~~---------~~~---~~~~~-~--~~~~~~~~~~~~g~~   63 (166)
T cd04186           1 IIIVNYNSLEYLKACLDSLLAQTY--PDFEVIVVDNASTDG---------SVE---LLREL-F--PEVRLIRNGENLGFG   63 (166)
T ss_pred             CEEEecCCHHHHHHHHHHHHhccC--CCeEEEEEECCCCch---------HHH---HHHHh-C--CCeEEEecCCCcChH
Confidence            578999999999999999999765  466889988887421         122   22222 1  267888889999997


Q ss_pred             HHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          142 AQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       142 ~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      .+.-.++--. +.+++++++||+.++|.++.-+...+..
T Consensus        64 ~a~n~~~~~~-~~~~i~~~D~D~~~~~~~l~~~~~~~~~  101 (166)
T cd04186          64 AGNNQGIREA-KGDYVLLLNPDTVVEPGALLELLDAAEQ  101 (166)
T ss_pred             HHhhHHHhhC-CCCEEEEECCCcEECccHHHHHHHHHHh
Confidence            7776664212 6889999999999999999998887655

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily

Probab=98.14  E-value=3e-05  Score=66.56  Aligned_cols=99  Identities=20%  Similarity=0.208  Sum_probs=72.8

Q ss_pred             EEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcchh
Q 044432           62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGLQ  141 (584)
Q Consensus        62 IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlGLa  141 (584)
                      |++.+|||++.+.++|+||.+..+  ...+++|--|++.++.     .+   .+.+....+   ...+.++.+..|.|++
T Consensus         1 Viip~~n~~~~l~~~l~sl~~q~~--~~~~iivvdd~s~d~t-----~~---~~~~~~~~~---~~~~~~~~~~~~~g~~   67 (180)
T cd06423           1 IIVPAYNEEAVIERTIESLLALDY--PKLEVIVVDDGSTDDT-----LE---ILEELAALY---IRRVLVVRDKENGGKA   67 (180)
T ss_pred             CeecccChHHHHHHHHHHHHhCCC--CceEEEEEeCCCccch-----HH---HHHHHhccc---cceEEEEEecccCCch
Confidence            578899999999999999999765  4678888888874321     11   122222222   1356788889999997


Q ss_pred             HHHhhhccCCCCCceEEEEcCCceeChhHHHHH
Q 044432          142 AQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFL  174 (584)
Q Consensus       142 ~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ym  174 (584)
                      .+.-.++--. ..++++++++|..+.|.++.-|
T Consensus        68 ~~~n~~~~~~-~~~~i~~~D~D~~~~~~~l~~~   99 (180)
T cd06423          68 GALNAGLRHA-KGDIVVVLDADTILEPDALKRL   99 (180)
T ss_pred             HHHHHHHHhc-CCCEEEEECCCCCcChHHHHHH
Confidence            7776664212 6789999999999999998888

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the

>PRK11204 N-glycosyltransferase; Provisional

Probab=98.06  E-value=6.7e-05  Score=78.54  Aligned_cols=117  Identities=14%  Similarity=0.088  Sum_probs=86.8

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHH-HhhccccCCCceEEEeec
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILR-FLDGFEWKFGDKFVHYRT  135 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk-~L~gF~WP~g~vtIi~R~  135 (584)
                      ...+.|++.+||+.+.+.++++||.+.+|+  ..+++|--|++.++.         .++++ +.+.+    .+++++++.
T Consensus        53 ~p~vsViIp~yne~~~i~~~l~sl~~q~yp--~~eiiVvdD~s~d~t---------~~~l~~~~~~~----~~v~~i~~~  117 (420)
T PRK11204         53 YPGVSILVPCYNEGENVEETISHLLALRYP--NYEVIAINDGSSDNT---------GEILDRLAAQI----PRLRVIHLA  117 (420)
T ss_pred             CCCEEEEEecCCCHHHHHHHHHHHHhCCCC--CeEEEEEECCCCccH---------HHHHHHHHHhC----CcEEEEEcC
Confidence            345899999999999999999999998886  567888888875321         22222 22322    468888889


Q ss_pred             CCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEe
Q 044432          136 ANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASL  198 (584)
Q Consensus       136 ~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISL  198 (584)
                      +|.|.+.+.=.|.- ..+.++++++++|.++.|+++..+...++.   +      +++..+++
T Consensus       118 ~n~Gka~aln~g~~-~a~~d~i~~lDaD~~~~~d~L~~l~~~~~~---~------~~v~~v~g  170 (420)
T PRK11204        118 ENQGKANALNTGAA-AARSEYLVCIDGDALLDPDAAAYMVEHFLH---N------PRVGAVTG  170 (420)
T ss_pred             CCCCHHHHHHHHHH-HcCCCEEEEECCCCCCChhHHHHHHHHHHh---C------CCeEEEEC
Confidence            99998776655531 236899999999999999999988887643   2      46777765

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=98.01  E-value=3.6e-05  Score=71.44  Aligned_cols=105  Identities=20%  Similarity=0.208  Sum_probs=75.8

Q ss_pred             EEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeec--CCcc
Q 044432           62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRT--ANAG  139 (584)
Q Consensus        62 IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~--~NlG  139 (584)
                      |++.+||+++.+.+||+||.+..|..+..+++|--|++.+.         +.+++++..  ..+...+.++.+.  .|.|
T Consensus         1 viip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~---------t~~~~~~~~--~~~~~~v~~~~~~~~~~~g   69 (229)
T cd04192           1 VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDG---------TVQILEFAA--AKPNFQLKILNNSRVSISG   69 (229)
T ss_pred             CEEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcC---------hHHHHHHHH--hCCCcceEEeeccCcccch
Confidence            68899999999999999999988876567888887776421         233333221  2333466777666  5788


Q ss_pred             hhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          140 LQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       140 La~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      .+.++-.+.. ....++++++++|..+.|.++.-|..++
T Consensus        70 ~~~a~n~g~~-~~~~d~i~~~D~D~~~~~~~l~~l~~~~  107 (229)
T cd04192          70 KKNALTTAIK-AAKGDWIVTTDADCVVPSNWLLTFVAFI  107 (229)
T ss_pred             hHHHHHHHHH-HhcCCEEEEECCCcccCHHHHHHHHHHh
Confidence            8776655532 2257899999999999999888777665

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=97.95  E-value=0.00015  Score=69.30  Aligned_cols=110  Identities=18%  Similarity=0.128  Sum_probs=81.1

Q ss_pred             CCCceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEe
Q 044432           54 HSSNFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHY  133 (584)
Q Consensus        54 ~~~~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~  133 (584)
                      .+....+.|++.+||+.+.+.++|+|+.+..+.....+++|-.|++.+.         +.+++   +.+.  ...++++.
T Consensus        25 ~~~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~---------t~~~~---~~~~--~~~v~~i~   90 (251)
T cd06439          25 PAYLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDG---------TAEIA---REYA--DKGVKLLR   90 (251)
T ss_pred             CCCCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCcc---------HHHHH---HHHh--hCcEEEEE
Confidence            3345568999999999999999999999888876557888888886421         12222   2221  01578888


Q ss_pred             ecCCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          134 RTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       134 R~~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      ...|.|.+.+.-.++. ....+.++++++|..+.|.++.=+..++
T Consensus        91 ~~~~~g~~~a~n~gi~-~a~~d~i~~lD~D~~~~~~~l~~l~~~~  134 (251)
T cd06439          91 FPERRGKAAALNRALA-LATGEIVVFTDANALLDPDALRLLVRHF  134 (251)
T ss_pred             cCCCCChHHHHHHHHH-HcCCCEEEEEccccCcCHHHHHHHHHHh
Confidence            8899998777666642 1246899999999999998888777665

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily

Probab=97.93  E-value=3.7e-05  Score=69.43  Aligned_cols=105  Identities=14%  Similarity=0.064  Sum_probs=77.4

Q ss_pred             EEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHH-HHhhccccCCCceEEEeecCCcch
Q 044432           62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAIL-RFLDGFEWKFGDKFVHYRTANAGL  140 (584)
Q Consensus        62 IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrell-k~L~gF~WP~g~vtIi~R~~NlGL  140 (584)
                      |++.+||+++++.+||+||.+..+.....+++|--|++.++.         .+++ ++...+    ..++++..++|.|.
T Consensus         1 iii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~---------~~~~~~~~~~~----~~~~~~~~~~n~G~   67 (185)
T cd04179           1 VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGT---------AEIARELAARV----PRVRVIRLSRNFGK   67 (185)
T ss_pred             CeecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCCh---------HHHHHHHHHhC----CCeEEEEccCCCCc
Confidence            678999999999999999999876444567888877764221         2222 233333    45688999999999


Q ss_pred             hHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          141 QAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       141 a~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      +.+.-.++.-. ..+++++|++|..++|.++.-+..++..
T Consensus        68 ~~a~n~g~~~a-~gd~i~~lD~D~~~~~~~l~~l~~~~~~  106 (185)
T cd04179          68 GAAVRAGFKAA-RGDIVVTMDADLQHPPEDIPKLLEKLLE  106 (185)
T ss_pred             cHHHHHHHHHh-cCCEEEEEeCCCCCCHHHHHHHHHHHhc
Confidence            88777774212 3489999999999999998877776433

DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis

Probab=97.89  E-value=0.00018  Score=66.15  Aligned_cols=107  Identities=20%  Similarity=0.199  Sum_probs=77.8

Q ss_pred             eEEEEEEcCCCc-hHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCC
Q 044432           59 TLIIKVLTFNRL-NSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTAN  137 (584)
Q Consensus        59 ~I~IvVfaYNRP-~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~N  137 (584)
                      .+.|++.+||+. +.+.+||+||.+..+.  ..+++|.-|++.++     .+   .++++   .+......+++++.+.|
T Consensus         2 ~vsiii~~~n~~~~~l~~~l~sl~~q~~~--~~eiivvd~gs~d~-----~~---~~~~~---~~~~~~~~~~~~~~~~~   68 (202)
T cd04184           2 LISIVMPVYNTPEKYLREAIESVRAQTYP--NWELCIADDASTDP-----EV---KRVLK---KYAAQDPRIKVVFREEN   68 (202)
T ss_pred             eEEEEEecccCcHHHHHHHHHHHHhCcCC--CeEEEEEeCCCCCh-----HH---HHHHH---HHHhcCCCEEEEEcccC
Confidence            478999999999 9999999999986654  45777776776421     12   22222   22112246788888999


Q ss_pred             cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHH
Q 044432          138 AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIV  179 (584)
Q Consensus       138 lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl  179 (584)
                      .|.+.++-.|+- ....++++++++|..+.|.++.-+..++.
T Consensus        69 ~g~~~a~n~g~~-~a~~d~i~~ld~D~~~~~~~l~~~~~~~~  109 (202)
T cd04184          69 GGISAATNSALE-LATGEFVALLDHDDELAPHALYEVVKALN  109 (202)
T ss_pred             CCHHHHHHHHHH-hhcCCEEEEECCCCcCChHHHHHHHHHHH
Confidence            999877766642 22578999999999999999988888763

The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1

Probab=97.86  E-value=6.5e-05  Score=70.09  Aligned_cols=102  Identities=20%  Similarity=0.244  Sum_probs=75.8

Q ss_pred             EEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHH-HhhccccCCCceEEEeecCCcch
Q 044432           62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILR-FLDGFEWKFGDKFVHYRTANAGL  140 (584)
Q Consensus        62 IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk-~L~gF~WP~g~vtIi~R~~NlGL  140 (584)
                      |++.+||++++|.++|+||.+..+ ....+++|--|++.++.         .++++ +.+..    ..+.++.++.|.|.
T Consensus         1 ViIp~yn~~~~l~~~l~sl~~q~~-~~~~eiiiVDd~S~d~t---------~~~~~~~~~~~----~~i~~~~~~~n~G~   66 (224)
T cd06442           1 IIIPTYNERENIPELIERLDAALK-GIDYEIIVVDDNSPDGT---------AEIVRELAKEY----PRVRLIVRPGKRGL   66 (224)
T ss_pred             CeEeccchhhhHHHHHHHHHHhhc-CCCeEEEEEeCCCCCCh---------HHHHHHHHHhC----CceEEEecCCCCCh
Confidence            578899999999999999998765 34567888878764221         22222 22322    45788889999999


Q ss_pred             hHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          141 QAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       141 a~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      +.+.-.|+- ....+++++|++|.++.|.++.-+-..+
T Consensus        67 ~~a~n~g~~-~a~gd~i~~lD~D~~~~~~~l~~l~~~~  103 (224)
T cd06442          67 GSAYIEGFK-AARGDVIVVMDADLSHPPEYIPELLEAQ  103 (224)
T ss_pred             HHHHHHHHH-HcCCCEEEEEECCCCCCHHHHHHHHHHH
Confidence            888777742 1245899999999999999998877765

Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=97.86  E-value=0.0001  Score=68.17  Aligned_cols=103  Identities=20%  Similarity=0.206  Sum_probs=72.2

Q ss_pred             EEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcchh
Q 044432           62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGLQ  141 (584)
Q Consensus        62 IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlGLa  141 (584)
                      |++++|||++.+.+||+||.+..+.  ..+++|.-|++.+         .+.+   .++.+...+ .++++....|.|.+
T Consensus         1 viI~~~n~~~~l~~~l~sl~~q~~~--~~eiiivD~~s~d---------~t~~---~~~~~~~~~-~i~~~~~~~n~g~~   65 (202)
T cd04185           1 AVVVTYNRLDLLKECLDALLAQTRP--PDHIIVIDNASTD---------GTAE---WLTSLGDLD-NIVYLRLPENLGGA   65 (202)
T ss_pred             CEEEeeCCHHHHHHHHHHHHhccCC--CceEEEEECCCCc---------chHH---HHHHhcCCC-ceEEEECccccchh
Confidence            5788999999999999999987665  3456666666532         1223   333333322 26788888899986


Q ss_pred             HHHhhhcc-C-CCCCceEEEEcCCceeChhHHHHHHHHHH
Q 044432          142 AQWLEAWW-P-TSDHEFAFVVEDDLEVSPLFYKFLRGLIV  179 (584)
Q Consensus       142 ~sIIEgwy-P-ts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl  179 (584)
                      .++-.++- . ....+++++|+||..+.|.++.-+..++.
T Consensus        66 ~~~n~~~~~a~~~~~d~v~~ld~D~~~~~~~l~~l~~~~~  105 (202)
T cd04185          66 GGFYEGVRRAYELGYDWIWLMDDDAIPDPDALEKLLAYAD  105 (202)
T ss_pred             hHHHHHHHHHhccCCCEEEEeCCCCCcChHHHHHHHHHHh
Confidence            66555531 1 22578999999999999999887777653

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=97.85  E-value=0.00021  Score=65.70  Aligned_cols=104  Identities=18%  Similarity=0.164  Sum_probs=78.3

Q ss_pred             EEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHH-HhhccccCCCceEEEeecCCcch
Q 044432           62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILR-FLDGFEWKFGDKFVHYRTANAGL  140 (584)
Q Consensus        62 IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk-~L~gF~WP~g~vtIi~R~~NlGL  140 (584)
                      |++.+|||++.|.++|+||.+..+.  ..+++|--|++.+.         +.++++ +...  .| ..++++....|.|.
T Consensus         2 IvIp~yn~~~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~---------t~~~~~~~~~~--~~-~~~~~~~~~~~~G~   67 (214)
T cd04196           2 VLMATYNGEKYLREQLDSILAQTYK--NDELIISDDGSTDG---------TVEIIKEYIDK--DP-FIIILIRNGKNLGV   67 (214)
T ss_pred             EEEEecCcHHHHHHHHHHHHhCcCC--CeEEEEEeCCCCCC---------cHHHHHHHHhc--CC-ceEEEEeCCCCccH
Confidence            7899999999999999999998765  57788888887532         123322 2222  33 36778888899999


Q ss_pred             hHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          141 QAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       141 a~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      +.++-.|.. ....+++++|++|....|.++.-+...+..
T Consensus        68 ~~~~n~g~~-~~~g~~v~~ld~Dd~~~~~~l~~~~~~~~~  106 (214)
T cd04196          68 ARNFESLLQ-AADGDYVFFCDQDDIWLPDKLERLLKAFLK  106 (214)
T ss_pred             HHHHHHHHH-hCCCCEEEEECCCcccChhHHHHHHHHHhc
Confidence            888777732 225789999999999999999888887543

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=97.82  E-value=6.3e-05  Score=70.76  Aligned_cols=107  Identities=24%  Similarity=0.286  Sum_probs=65.2

Q ss_pred             eEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCc
Q 044432           59 TLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANA  138 (584)
Q Consensus        59 ~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~Nl  138 (584)
                      +|.|++.+||+++.+.++|+||.+.+|  ...+++|-.|++..+.     .+..++   +...  +|...++++.+..|.
T Consensus         2 ~v~Vvip~~~~~~~l~~~l~sl~~~~~--~~~~v~vvd~~~~~~~-----~~~~~~---~~~~--~~~~~v~vi~~~~~~   69 (228)
T PF13641_consen    2 RVSVVIPAYNEDDVLRRCLESLLAQDY--PRLEVVVVDDGSDDET-----AEILRA---LAAR--YPRVRVRVIRRPRNP   69 (228)
T ss_dssp             -EEEE--BSS-HHHHHHHHHHHTTSHH--HTEEEEEEEE-SSS-G-----CTTHHH---HHHT--TGG-GEEEEE----H
T ss_pred             EEEEEEEecCCHHHHHHHHHHHHcCCC--CCeEEEEEECCCChHH-----HHHHHH---HHHH--cCCCceEEeecCCCC
Confidence            378999999999999999999999877  4678888777754221     222222   2233  343357888887766


Q ss_pred             c---hhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          139 G---LQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       139 G---La~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      |   .+.++-+++- ....+.+++|+||..+.|.|+.-+..++
T Consensus        70 g~~~k~~a~n~~~~-~~~~d~i~~lD~D~~~~p~~l~~~~~~~  111 (228)
T PF13641_consen   70 GPGGKARALNEALA-AARGDYILFLDDDTVLDPDWLERLLAAF  111 (228)
T ss_dssp             HHHHHHHHHHHHHH-H---SEEEEE-SSEEE-CHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHH-hcCCCEEEEECCCcEECHHHHHHHHHHH
Confidence            6   3444444421 1258899999999999999999988887

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=97.78  E-value=0.00018  Score=67.60  Aligned_cols=105  Identities=15%  Similarity=0.019  Sum_probs=71.4

Q ss_pred             EEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcc
Q 044432           60 LIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAG  139 (584)
Q Consensus        60 I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlG  139 (584)
                      +.|++.+||+++.+.++|+||.+..+.....+++|.-|++.++         +.++++.   +......+.++.. .+.|
T Consensus         2 ~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~---------~~~~~~~---~~~~~~~v~~i~~-~~~~   68 (249)
T cd02525           2 VSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDG---------TREIVQE---YAAKDPRIRLIDN-PKRI   68 (249)
T ss_pred             EEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCCCCcc---------HHHHHHH---HHhcCCeEEEEeC-CCCC
Confidence            6799999999999999999999877764566788877765421         1222222   2111235666654 4556


Q ss_pred             hhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          140 LQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       140 La~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      .+.++-.|+-- ...+++++|.||.++.|.++.-+...+
T Consensus        69 ~~~a~N~g~~~-a~~d~v~~lD~D~~~~~~~l~~~~~~~  106 (249)
T cd02525          69 QSAGLNIGIRN-SRGDIIIRVDAHAVYPKDYILELVEAL  106 (249)
T ss_pred             chHHHHHHHHH-hCCCEEEEECCCccCCHHHHHHHHHHH
Confidence            65554444311 257899999999999999887766543

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111

Probab=97.78  E-value=0.00062  Score=73.05  Aligned_cols=119  Identities=14%  Similarity=0.165  Sum_probs=87.9

Q ss_pred             eEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHH-HhhccccCCCceEEEeecCC
Q 044432           59 TLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILR-FLDGFEWKFGDKFVHYRTAN  137 (584)
Q Consensus        59 ~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk-~L~gF~WP~g~vtIi~R~~N  137 (584)
                      .+.|++.+||..+.+.+||+||.+.+|+.+.++++|--|+..++         +.++++ +.+.+    +.+.++....|
T Consensus        50 ~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~---------T~~il~~~~~~~----~~v~v~~~~~~  116 (439)
T TIGR03111        50 DITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQSTDD---------SFQVFCRAQNEF----PGLSLRYMNSD  116 (439)
T ss_pred             CEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChh---------HHHHHHHHHHhC----CCeEEEEeCCC
Confidence            47899999999999999999999999987777888887776422         223322 22333    46777777788


Q ss_pred             cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEeec
Q 044432          138 AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQR  200 (584)
Q Consensus       138 lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISLY~  200 (584)
                      .|.+.+.-.|.. .+..++++++++|..+.|+++.-+..++..   +      +.+..+.+..
T Consensus       117 ~Gka~AlN~gl~-~s~g~~v~~~DaD~~~~~d~L~~l~~~f~~---~------~~v~~v~g~~  169 (439)
T TIGR03111       117 QGKAKALNAAIY-NSIGKYIIHIDSDGKLHKDAIKNMVTRFEN---N------PDIHAMTGVI  169 (439)
T ss_pred             CCHHHHHHHHHH-HccCCEEEEECCCCCcChHHHHHHHHHHHh---C------CCeEEEEeEE
Confidence            998776666642 235789999999999999999888877642   2      4677666654

Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).

>PRK14583 hmsR N-glycosyltransferase; Provisional

Probab=97.78  E-value=0.00052  Score=73.55  Aligned_cols=117  Identities=14%  Similarity=0.028  Sum_probs=85.8

Q ss_pred             eeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCC
Q 044432           58 FTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTAN  137 (584)
Q Consensus        58 m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~N  137 (584)
                      ..+.|++.+||....+.++|+||.+.+|.  ..+++|-.|++.++.     .+..   .+.....    .+++++++..|
T Consensus        75 p~vsViIP~yNE~~~i~~~l~sll~q~yp--~~eIivVdDgs~D~t-----~~~~---~~~~~~~----~~v~vv~~~~n  140 (444)
T PRK14583         75 PLVSILVPCFNEGLNARETIHAALAQTYT--NIEVIAINDGSSDDT-----AQVL---DALLAED----PRLRVIHLAHN  140 (444)
T ss_pred             CcEEEEEEeCCCHHHHHHHHHHHHcCCCC--CeEEEEEECCCCccH-----HHHH---HHHHHhC----CCEEEEEeCCC
Confidence            45899999999999999999999998887  478888888874321     2222   2232322    46888888899


Q ss_pred             cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEe
Q 044432          138 AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASL  198 (584)
Q Consensus       138 lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISL  198 (584)
                      .|-+.+.-.|.. ..+.+++++++.|..+.|+++..+...+.+   +      +++..|.+
T Consensus       141 ~Gka~AlN~gl~-~a~~d~iv~lDAD~~~~~d~L~~lv~~~~~---~------~~~g~v~g  191 (444)
T PRK14583        141 QGKAIALRMGAA-AARSEYLVCIDGDALLDKNAVPYLVAPLIA---N------PRTGAVTG  191 (444)
T ss_pred             CCHHHHHHHHHH-hCCCCEEEEECCCCCcCHHHHHHHHHHHHh---C------CCeEEEEc
Confidence            997665544421 236899999999999999999999877643   2      46666664

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase

Probab=97.72  E-value=0.00023  Score=64.31  Aligned_cols=103  Identities=17%  Similarity=0.163  Sum_probs=67.1

Q ss_pred             EEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHH-HhhccccCCCceEEEeecCCcch
Q 044432           62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILR-FLDGFEWKFGDKFVHYRTANAGL  140 (584)
Q Consensus        62 IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk-~L~gF~WP~g~vtIi~R~~NlGL  140 (584)
                      |++.+|||++.|+++|+||.+..+.  ..+++|.-|++...         ..++++ +...  .+...+.+++...+.|.
T Consensus         1 ivip~~n~~~~l~~~l~sl~~q~~~--~~eiivvdd~s~d~---------t~~~~~~~~~~--~~~~~~~~~~~~~~~~~   67 (182)
T cd06420           1 LIITTYNRPEALELVLKSVLNQSIL--PFEVIIADDGSTEE---------TKELIEEFKSQ--FPIPIKHVWQEDEGFRK   67 (182)
T ss_pred             CEEeecCChHHHHHHHHHHHhccCC--CCEEEEEeCCCchh---------HHHHHHHHHhh--cCCceEEEEcCCcchhH
Confidence            6789999999999999999987643  46788888886421         122332 2221  22223344444445566


Q ss_pred             hHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          141 QAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       141 a~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      +...-.|+. ....+++++|++|..++|.|+.-+...+
T Consensus        68 ~~~~n~g~~-~a~g~~i~~lD~D~~~~~~~l~~~~~~~  104 (182)
T cd06420          68 AKIRNKAIA-AAKGDYLIFIDGDCIPHPDFIADHIELA  104 (182)
T ss_pred             HHHHHHHHH-HhcCCEEEEEcCCcccCHHHHHHHHHHh
Confidence            544333321 2357899999999999999988766554

Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex

Probab=97.70  E-value=0.00041  Score=66.13  Aligned_cols=109  Identities=17%  Similarity=0.248  Sum_probs=71.3

Q ss_pred             EEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcc
Q 044432           60 LIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAG  139 (584)
Q Consensus        60 I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlG  139 (584)
                      +.|++.+||..+.+.++|+||.+.+|..+...++| +|.+.++     .++.+++   ....+.=...++..+.+..|.|
T Consensus         3 vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiV-vD~s~D~-----t~~~~~~---~~~~~~~~~~~i~~~~~~~~~G   73 (232)
T cd06437           3 VTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQV-LDDSTDE-----TVRLARE---IVEEYAAQGVNIKHVRRADRTG   73 (232)
T ss_pred             eEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEE-EECCCCc-----HHHHHHH---HHHHHhhcCCceEEEECCCCCC
Confidence            78999999999999999999999888766666655 5654321     1332222   2222211122555666666666


Q ss_pred             h-hHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          140 L-QAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       140 L-a~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      - +.+.-.|+. ....++++++.+|..+.|.++.-+...+
T Consensus        74 ~k~~a~n~g~~-~a~~~~i~~~DaD~~~~~~~l~~~~~~~  112 (232)
T cd06437          74 YKAGALAEGMK-VAKGEYVAIFDADFVPPPDFLQKTPPYF  112 (232)
T ss_pred             CchHHHHHHHH-hCCCCEEEEEcCCCCCChHHHHHhhhhh
Confidence            4 333333321 2268899999999999999988866543

Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan

Probab=97.69  E-value=0.0005  Score=64.81  Aligned_cols=112  Identities=14%  Similarity=0.203  Sum_probs=77.9

Q ss_pred             eEEEEEEcCCCc-hHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCC
Q 044432           59 TLIIKVLTFNRL-NSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTAN  137 (584)
Q Consensus        59 ~I~IvVfaYNRP-~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~N  137 (584)
                      +|.|++.+||++ +.+.+||+||.+..    ..+++|-.|++.+         ++.+.+....    ++..+.++ ...|
T Consensus         1 ~isVvIp~~ne~~~~l~~~l~sl~~q~----~~eiivvdd~s~d---------~~~~~l~~~~----~~~~~~v~-~~~~   62 (235)
T cd06434           1 DVTVIIPVYDEDPDVFRECLRSILRQK----PLEIIVVTDGDDE---------PYLSILSQTV----KYGGIFVI-TVPH   62 (235)
T ss_pred             CeEEEEeecCCChHHHHHHHHHHHhCC----CCEEEEEeCCCCh---------HHHHHHHhhc----cCCcEEEE-ecCC
Confidence            367999999999 99999999999864    4578777777642         1122221112    12344444 5778


Q ss_pred             cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEee
Q 044432          138 AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQ  199 (584)
Q Consensus       138 lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISLY  199 (584)
                      .|.+.++-.|+. ....+++++|.+|..+.|.++.=+..++.    +      +.+.++++.
T Consensus        63 ~g~~~a~n~g~~-~a~~d~v~~lD~D~~~~~~~l~~l~~~~~----~------~~v~~v~~~  113 (235)
T cd06434          63 PGKRRALAEGIR-HVTTDIVVLLDSDTVWPPNALPEMLKPFE----D------PKVGGVGTN  113 (235)
T ss_pred             CChHHHHHHHHH-HhCCCEEEEECCCceeChhHHHHHHHhcc----C------CCEeEEcCc
Confidence            898887766642 22689999999999999998776666653    2      477777654

Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.

>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases []

Probab=97.65  E-value=0.00035  Score=67.03  Aligned_cols=156  Identities=11%  Similarity=0.138  Sum_probs=106.5

Q ss_pred             cceeEeecCCchhhhhhhhCCCcccchhHH-HhhhhhhhhccccCCchHHHHHHHHHHHHHHHhhhcCcceEEEecceee
Q 044432          363 SQNHIFLGSHSDFLYDLARRGHPVIDADQF-LNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDANFLP  441 (584)
Q Consensus       363 ~~n~~~~~~~~~~~~dl~~~g~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~kc~~~~y~~~~~~~~~~~  441 (584)
                      ++|++++.-+.+...-|+++|.+++...-. .+...    ..+..-+..+.+-...|.-+|..+|+.||+.|.+|+-.+.
T Consensus         3 ~~~~lv~a~D~~t~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~   78 (212)
T PF03407_consen    3 IDNFLVVALDEETYDALEELGPPCFYFPSDASESED----SAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVW   78 (212)
T ss_pred             cccEEEEEECHHHHHHHHhcCCCeEEEecccccccc----hhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEE
Confidence            678999999999999999999996532222 11111    1123336777778889999999999999999999999999


Q ss_pred             ccCCccccccCCCCceeecc---------------cceEEEEeccchhhhhhhhhHHHHHHhhhhccCCCCCCchHHHHH
Q 044432          442 FSNDLFLEPIDATSDFYYGE---------------SSKLLFVKSSSSVQKMWTKNFLYEVANLVDKVSLPRDHRNFANIM  506 (584)
Q Consensus       442 ~~~~~~~~~~~~~~d~~~~~---------------~~~~~~~~~s~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (584)
                      +.+. +.-...+..|+.+..               ..|++|+|++..+++++.+     +...........++.-|-.++
T Consensus        79 ~~dp-~~~~~~~~~Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~~~~~~-----w~~~~~~~~~~~DQ~~~n~~l  152 (212)
T PF03407_consen   79 LRDP-LPYFENPDADILFSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTIAFLED-----WLERMAESPGCWDQQAFNELL  152 (212)
T ss_pred             ecCc-HHhhccCCCceEEecCCCcccchhhcCCccccceEEEecCHHHHHHHHH-----HHHHHHhCCCcchHHHHHHHH
Confidence            9884 422235777777653               5789999999999887665     333222222222444444444


Q ss_pred             HHHHhhcccceeeeeccceeee
Q 044432          507 ANLLRQKAGVMIKRVDESKIGL  528 (584)
Q Consensus       507 ~~~~~~~~~~~~~~~~~~~~~~  528 (584)
                      .+.....+++++..+|-..++-
T Consensus       153 ~~~~~~~~~~~~~~L~~~~f~~  174 (212)
T PF03407_consen  153 REQAARYGGLRVRFLPPSLFPN  174 (212)
T ss_pred             HhcccCCcCcEEEEeCHHHeec
Confidence            3322221458999999887743

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=97.64  E-value=0.00044  Score=69.27  Aligned_cols=108  Identities=14%  Similarity=0.083  Sum_probs=77.4

Q ss_pred             EEEEcCCCc-hHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcch
Q 044432           62 IKVLTFNRL-NSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGL  140 (584)
Q Consensus        62 IvVfaYNRP-~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlGL  140 (584)
                      |++.+||+. +.|.+||+||.+..+.....+++|-=|++.+.+     ++   .+.+.... .. ...+++++.+.|.|.
T Consensus         2 IIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t-----~~---~~~~~~~~-~~-~~~v~vi~~~~n~G~   71 (299)
T cd02510           2 VIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPE-----LK---LLLEEYYK-KY-LPKVKVLRLKKREGL   71 (299)
T ss_pred             EEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchH-----HH---HHHHHHHh-hc-CCcEEEEEcCCCCCH
Confidence            889999999 999999999998776543457777777764221     11   11121111 11 146889999999999


Q ss_pred             hHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          141 QAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       141 a~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      +.+.-.|.-- ...+++++|.+|+++.|.++.-|-..+..
T Consensus        72 ~~a~N~g~~~-A~gd~i~fLD~D~~~~~~wL~~ll~~l~~  110 (299)
T cd02510          72 IRARIAGARA-ATGDVLVFLDSHCEVNVGWLEPLLARIAE  110 (299)
T ss_pred             HHHHHHHHHH-ccCCEEEEEeCCcccCccHHHHHHHHHHh
Confidence            8776666321 25789999999999999999888877754

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=97.64  E-value=0.00062  Score=62.69  Aligned_cols=104  Identities=14%  Similarity=0.096  Sum_probs=74.5

Q ss_pred             EEEEcCCCc--hHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcc
Q 044432           62 IKVLTFNRL--NSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAG  139 (584)
Q Consensus        62 IvVfaYNRP--~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlG  139 (584)
                      |++.+||+.  +.+.+||+||.+..+.  ...++|--|++..        +.+.+++   +.+.-.++ ++++.++.|.|
T Consensus         2 viip~~n~~~~~~l~~~l~Sl~~q~~~--~~eiiivdd~ss~--------d~t~~~~---~~~~~~~~-i~~i~~~~n~G   67 (201)
T cd04195           2 VLMSVYIKEKPEFLREALESILKQTLP--PDEVVLVKDGPVT--------QSLNEVL---EEFKRKLP-LKVVPLEKNRG   67 (201)
T ss_pred             EEEEccccchHHHHHHHHHHHHhcCCC--CcEEEEEECCCCc--------hhHHHHH---HHHHhcCC-eEEEEcCcccc
Confidence            678888875  6999999999997765  3466666677532        1223332   22222223 77888899999


Q ss_pred             hhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          140 LQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       140 La~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      .+.+.-.|+. ....+++++|++|.++.|.++.-+-..+..
T Consensus        68 ~~~a~N~g~~-~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~  107 (201)
T cd04195          68 LGKALNEGLK-HCTYDWVARMDTDDISLPDRFEKQLDFIEK  107 (201)
T ss_pred             HHHHHHHHHH-hcCCCEEEEeCCccccCcHHHHHHHHHHHh
Confidence            9887766642 125789999999999999999988888754

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis

Probab=97.64  E-value=0.00032  Score=64.81  Aligned_cols=103  Identities=16%  Similarity=0.124  Sum_probs=72.9

Q ss_pred             EEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcchh
Q 044432           62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGLQ  141 (584)
Q Consensus        62 IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlGLa  141 (584)
                      |++.+||..+.+.++|+||.+..|+....+++|-.|++.++         +.+   .++.+.   ..+.++....|.|.+
T Consensus         1 VvIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~---------t~~---~~~~~~---~~~~~~~~~~~~gk~   65 (183)
T cd06438           1 ILIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADNCTDD---------TAQ---VARAAG---ATVLERHDPERRGKG   65 (183)
T ss_pred             CEEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCCCCch---------HHH---HHHHcC---CeEEEeCCCCCCCHH
Confidence            67899999999999999999988866667788888886421         222   333331   123334445677776


Q ss_pred             HHHhhhcc-C---CCCCceEEEEcCCceeChhHHHHHHHHHH
Q 044432          142 AQWLEAWW-P---TSDHEFAFVVEDDLEVSPLFYKFLRGLIV  179 (584)
Q Consensus       142 ~sIIEgwy-P---ts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl  179 (584)
                      .++-.++. .   ....+.+++++.|..+.|.|+.-|..++.
T Consensus        66 ~aln~g~~~a~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~~  107 (183)
T cd06438          66 YALDFGFRHLLNLADDPDAVVVFDADNLVDPNALEELNARFA  107 (183)
T ss_pred             HHHHHHHHHHHhcCCCCCEEEEEcCCCCCChhHHHHHHHHHh
Confidence            55444431 1   12578999999999999999999988874

The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=97.62  E-value=0.0005  Score=64.33  Aligned_cols=105  Identities=11%  Similarity=0.185  Sum_probs=73.0

Q ss_pred             EEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHH-HHhhccccCCCceEEEeecCCc
Q 044432           60 LIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAIL-RFLDGFEWKFGDKFVHYRTANA  138 (584)
Q Consensus        60 I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrell-k~L~gF~WP~g~vtIi~R~~Nl  138 (584)
                      +.|++.+||+.+.+.++|+||.+..|.  ..+++|--|++.++         +.+++ ++...+  |...++++....+.
T Consensus         3 vsviip~~n~~~~l~~~L~sl~~q~~~--~~eiivVdd~s~d~---------t~~~~~~~~~~~--~~~~~~~~~~~~~~   69 (196)
T cd02520           3 VSILKPLCGVDPNLYENLESFFQQDYP--KYEILFCVQDEDDP---------AIPVVRKLIAKY--PNVDARLLIGGEKV   69 (196)
T ss_pred             eEEEEecCCCCccHHHHHHHHHhccCC--CeEEEEEeCCCcch---------HHHHHHHHHHHC--CCCcEEEEecCCcC
Confidence            689999999999999999999998775  37788877776422         12222 233333  33456666666665


Q ss_pred             ch---hHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          139 GL---QAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       139 GL---a~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      |.   +.++..++. ....++++++++|..++|.++..|..++
T Consensus        70 g~~~~~~~~n~g~~-~a~~d~i~~~D~D~~~~~~~l~~l~~~~  111 (196)
T cd02520          70 GINPKVNNLIKGYE-EARYDILVISDSDISVPPDYLRRMVAPL  111 (196)
T ss_pred             CCCHhHHHHHHHHH-hCCCCEEEEECCCceEChhHHHHHHHHh
Confidence            64   223333421 1257899999999999999999888775

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=97.62  E-value=0.00079  Score=60.63  Aligned_cols=99  Identities=12%  Similarity=0.096  Sum_probs=69.7

Q ss_pred             EEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcchh
Q 044432           62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGLQ  141 (584)
Q Consensus        62 IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlGLa  141 (584)
                      |++.+|||++.+.++|+||.+..+.  ..+++|--|++.+.         +.+   .++.+.   ..+..+...+|.|.+
T Consensus         2 ivi~~~n~~~~l~~~l~sl~~q~~~--~~evivvDd~s~d~---------~~~---~~~~~~---~~~~~~~~~~~~g~~   64 (202)
T cd06433           2 IITPTYNQAETLEETIDSVLSQTYP--NIEYIVIDGGSTDG---------TVD---IIKKYE---DKITYWISEPDKGIY   64 (202)
T ss_pred             EEEeccchHHHHHHHHHHHHhCCCC--CceEEEEeCCCCcc---------HHH---HHHHhH---hhcEEEEecCCcCHH
Confidence            7889999999999999999886653  36787777776421         122   333331   124455667889997


Q ss_pred             HHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          142 AQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       142 ~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      .++-.++.-. ..+++++|++|..+.|.++.-+-..+
T Consensus        65 ~a~n~~~~~a-~~~~v~~ld~D~~~~~~~~~~~~~~~  100 (202)
T cd06433          65 DAMNKGIALA-TGDIIGFLNSDDTLLPGALLAVVAAF  100 (202)
T ss_pred             HHHHHHHHHc-CCCEEEEeCCCcccCchHHHHHHHHH
Confidence            7776664222 46899999999999998877766443

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=97.60  E-value=0.00063  Score=63.76  Aligned_cols=108  Identities=19%  Similarity=0.212  Sum_probs=73.1

Q ss_pred             eEEEEEEcCCCc-hHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCC
Q 044432           59 TLIIKVLTFNRL-NSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTAN  137 (584)
Q Consensus        59 ~I~IvVfaYNRP-~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~N  137 (584)
                      .+.|++.+||++ +.++++|+||.+..|..+..+|+|--|++.         +++.+   .++++.=. -.+.++.+..|
T Consensus         2 ~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~---------d~t~~---~~~~~~~~-~~~~~~~~~~~   68 (234)
T cd06421           2 TVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRR---------PELRA---LAAELGVE-YGYRYLTRPDN   68 (234)
T ss_pred             ceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCc---------hhHHH---HHHHhhcc-cCceEEEeCCC
Confidence            378999999985 679999999999888755567888766653         11223   33333111 14456666766


Q ss_pred             cch-hHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          138 AGL-QAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       138 lGL-a~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      .|- +.++-.++. ....++++++.+|..+.|.++.-+...+..
T Consensus        69 ~~~~~~~~n~~~~-~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~  111 (234)
T cd06421          69 RHAKAGNLNNALA-HTTGDFVAILDADHVPTPDFLRRTLGYFLD  111 (234)
T ss_pred             CCCcHHHHHHHHH-hCCCCEEEEEccccCcCccHHHHHHHHHhc
Confidence            654 333333321 126899999999999999999888888743

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily

Probab=97.60  E-value=0.00077  Score=65.08  Aligned_cols=108  Identities=14%  Similarity=0.108  Sum_probs=75.0

Q ss_pred             eEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccC-CCceEEEeecCC
Q 044432           59 TLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWK-FGDKFVHYRTAN  137 (584)
Q Consensus        59 ~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP-~g~vtIi~R~~N  137 (584)
                      .+.|++.+||+.+.+.++|+||.+..|.....+++|-.|++.+         ++.++   ++.+.=+ ...+.++.+..|
T Consensus         2 ~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d---------~t~~i---~~~~~~~~~~~i~~~~~~~~   69 (241)
T cd06427           2 VYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDE---------ETIAA---ARALRLPSIFRVVVVPPSQP   69 (241)
T ss_pred             eEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCc---------hHHHH---HHHhccCCCeeEEEecCCCC
Confidence            4789999999999999999999998887555777777777531         12232   3332111 123445555677


Q ss_pred             cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHH
Q 044432          138 AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIV  179 (584)
Q Consensus       138 lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl  179 (584)
                      .|.+.+.=.|+- .+..++++.+.+|..+.|.|+.=+...+.
T Consensus        70 ~G~~~a~n~g~~-~a~gd~i~~~DaD~~~~~~~l~~~~~~~~  110 (241)
T cd06427          70 RTKPKACNYALA-FARGEYVVIYDAEDAPDPDQLKKAVAAFA  110 (241)
T ss_pred             CchHHHHHHHHH-hcCCCEEEEEcCCCCCChHHHHHHHHHHH
Confidence            787666555532 23578999999999999999976666553

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase

Probab=97.57  E-value=0.00098  Score=64.70  Aligned_cols=113  Identities=14%  Similarity=0.154  Sum_probs=81.4

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecC
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTA  136 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~  136 (584)
                      .+.+.|++.+||..+.+.+++++|.+........+++|--|++.++         +.++++.+.. +.+...+.++.+..
T Consensus         8 ~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~---------t~~i~~~~~~-~~~~~~v~~~~~~~   77 (243)
T PLN02726          8 AMKYSIIVPTYNERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDG---------TQDVVKQLQK-VYGEDRILLRPRPG   77 (243)
T ss_pred             CceEEEEEccCCchhhHHHHHHHHHHHhccCCCeEEEEEeCCCCCC---------HHHHHHHHHH-hcCCCcEEEEecCC
Confidence            4568999999999999999999997643322367888888887532         2333322211 12334678888899


Q ss_pred             CcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          137 NAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       137 NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      |.|.+.+.-.|+.- ...++++++++|..+.|.++.-+-..+..
T Consensus        78 n~G~~~a~n~g~~~-a~g~~i~~lD~D~~~~~~~l~~l~~~~~~  120 (243)
T PLN02726         78 KLGLGTAYIHGLKH-ASGDFVVIMDADLSHHPKYLPSFIKKQRE  120 (243)
T ss_pred             CCCHHHHHHHHHHH-cCCCEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence            99998887777532 24679999999999999999877766543

>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

Probab=97.54  E-value=0.00054  Score=57.41  Aligned_cols=98  Identities=20%  Similarity=0.220  Sum_probs=68.7

Q ss_pred             EEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcchh
Q 044432           62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGLQ  141 (584)
Q Consensus        62 IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlGLa  141 (584)
                      |++++|||++.+.++|+|+.+..+  ...+++|..|++...     ..+   .+.+....    ......+.+..+.|.+
T Consensus         1 iii~~~~~~~~l~~~l~s~~~~~~--~~~~i~i~~~~~~~~-----~~~---~~~~~~~~----~~~~~~~~~~~~~g~~   66 (156)
T cd00761           1 VIIPAYNEEPYLERCLESLLAQTY--PNFEVIVVDDGSTDG-----TLE---ILEEYAKK----DPRVIRVINEENQGLA   66 (156)
T ss_pred             CEEeecCcHHHHHHHHHHHHhCCc--cceEEEEEeCCCCcc-----HHH---HHHHHHhc----CCCeEEEEecCCCChH
Confidence            578999999999999999999876  356778777765321     111   11112111    1346677788888887


Q ss_pred             HHHhhhccCCCCCceEEEEcCCceeChhHHHHH
Q 044432          142 AQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFL  174 (584)
Q Consensus       142 ~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ym  174 (584)
                      .++-.+.. ....+.++++++|..+.|.++..+
T Consensus        67 ~~~~~~~~-~~~~d~v~~~d~D~~~~~~~~~~~   98 (156)
T cd00761          67 AARNAGLK-AARGEYILFLDADDLLLPDWLERL   98 (156)
T ss_pred             HHHHHHHH-HhcCCEEEEECCCCccCccHHHHH
Confidence            66655521 115789999999999999999887

Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=97.50  E-value=0.0021  Score=67.41  Aligned_cols=107  Identities=15%  Similarity=0.215  Sum_probs=72.7

Q ss_pred             eeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHH-HHhhccccCCCceEEEeecC
Q 044432           58 FTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAIL-RFLDGFEWKFGDKFVHYRTA  136 (584)
Q Consensus        58 m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrell-k~L~gF~WP~g~vtIi~R~~  136 (584)
                      ..+.|++.+||..+.+.++|+||.+.+|+.  .++.|-.|++.+         .+.+++ ++.+.+  |...+.++...+
T Consensus        41 p~VSViiP~~nee~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D---------~t~~iv~~~~~~~--p~~~i~~v~~~~  107 (373)
T TIGR03472        41 PPVSVLKPLHGDEPELYENLASFCRQDYPG--FQMLFGVQDPDD---------PALAVVRRLRADF--PDADIDLVIDAR  107 (373)
T ss_pred             CCeEEEEECCCCChhHHHHHHHHHhcCCCC--eEEEEEeCCCCC---------cHHHHHHHHHHhC--CCCceEEEECCC
Confidence            348899999999999999999999999974  566664444321         112222 233433  444677777677


Q ss_pred             Ccchh---HHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          137 NAGLQ---AQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       137 NlGLa---~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      +.|..   .+...+ ....+++.++++++|+.++|+|+.-+...+
T Consensus       108 ~~G~~~K~~~l~~~-~~~a~ge~i~~~DaD~~~~p~~L~~lv~~~  151 (373)
T TIGR03472       108 RHGPNRKVSNLINM-LPHARHDILVIADSDISVGPDYLRQVVAPL  151 (373)
T ss_pred             CCCCChHHHHHHHH-HHhccCCEEEEECCCCCcChhHHHHHHHHh
Confidence            76641   222222 123478999999999999999998877665

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>PF05060 MGAT2: N-acetylglucosaminyltransferase II (MGAT2); InterPro: IPR007754 N-acetylglucosaminyltransferase II (2

Probab=97.50  E-value=0.002  Score=68.96  Aligned_cols=169  Identities=20%  Similarity=0.222  Sum_probs=101.3

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhcccc--------C---
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEW--------K---  125 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~W--------P---  125 (584)
                      +.++.|+|-++|||+-|+.|++||++|..- .++-|++.-|.-.            .++-+++++++.        |   
T Consensus        30 ~~~~vivvqVH~r~~yl~~li~sL~~~~~I-~~~llifSHd~~~------------~ein~~v~~I~Fc~v~QIf~P~S~   96 (356)
T PF05060_consen   30 NDSIVIVVQVHNRPEYLKLLIDSLSQARGI-EEALLIFSHDFYS------------EEINDLVQSIDFCRVMQIFYPYSI   96 (356)
T ss_pred             CCCEEEEEEECCcHHHHHHHHHHHHHhhCc-cceEEEEeccCCh------------HHHHHHHHhCCcceeEEEecccch
Confidence            355789999999999999999999999754 3555777777753            122223333322        1   


Q ss_pred             ---------------------------------CCceEEEeecCCcch--------hHHHhhhccCCCC-CceEEEEcCC
Q 044432          126 ---------------------------------FGDKFVHYRTANAGL--------QAQWLEAWWPTSD-HEFAFVVEDD  163 (584)
Q Consensus       126 ---------------------------------~g~vtIi~R~~NlGL--------a~sIIEgwyPts~-~e~VIVLEDD  163 (584)
                                                       +....=++|+.+.--        ++.|.+++..+.. .+.||+||+|
T Consensus        97 ql~p~~FPG~dP~DCpr~i~k~~a~~~~C~na~~pD~yGhyRea~~tq~KHHWWWk~n~Vf~~l~~~~~~~g~v~fLEED  176 (356)
T PF05060_consen   97 QLYPNEFPGQDPNDCPRDIKKEDALKLGCNNAEYPDSYGHYREAKFTQIKHHWWWKLNFVFDGLEETRNHNGWVLFLEED  176 (356)
T ss_pred             hhCCCCCCCCCcccccccccHhHHHhccCCCCCCccccCCcccccchhhhHHHHHHHHHHHHhhhhhccCCceEEEEecc
Confidence                                             111222344444322        6667777655554 5689999999


Q ss_pred             ceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEeecCCCCCCCCCCcccCCCCCCceeeecCCcchhhcCccchHHHHH
Q 044432          164 LEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEFRL  243 (584)
Q Consensus       164 LeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISLY~P~f~~~k~~~~i~~d~~~d~FL~Q~PsSWGwatw~d~WkeF~~  243 (584)
                      -.|+|+||+-++.+... +.+  .-..-.|.+...|............+.    ..++.. ....=|-|+=++.|+..+.
T Consensus       177 hyv~pD~l~~l~~~~~~-~~~--~cp~c~~~sLG~y~~~~~~~~~~~~v~----~~~W~S-skHNmGmAfNRs~W~kI~~  248 (356)
T PF05060_consen  177 HYVAPDFLHVLRLMIKL-KKS--ECPDCDILSLGTYDKSNGYQSDPNKVE----VTPWIS-SKHNMGMAFNRSTWNKIKS  248 (356)
T ss_pred             cccchhHHHHHHHHHHH-hhh--cCCCCCEEeccCCccccccccccceee----eecccc-ccccceeEecHHHHHHHHH
Confidence            99999999999988754 322  112234555555542111111111111    112332 2357789999999999985


Q ss_pred             HHH
Q 044432          244 WYD  246 (584)
Q Consensus       244 w~~  246 (584)
                      --+
T Consensus       249 ca~  251 (356)
T PF05060_consen  249 CAD  251 (356)
T ss_pred             HHH
Confidence            443

4.1.143 from EC) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides []. Mutations in the MGAT2 gene lead to a congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors []. Synonym(s): UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II, GnT II/MGAT2.; GO: 0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0005795 Golgi stack, 0016021 integral to membrane

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase

Probab=97.40  E-value=0.0023  Score=60.79  Aligned_cols=105  Identities=19%  Similarity=0.138  Sum_probs=70.5

Q ss_pred             EEEEcCCCc-hHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcch
Q 044432           62 IKVLTFNRL-NSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGL  140 (584)
Q Consensus        62 IvVfaYNRP-~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlGL  140 (584)
                      |++.+||++ +.+.++|+||.+.+|.  ..+++|--|++.+.+    ..+.   +.+..+..   ..+++++....|.|.
T Consensus         2 iiip~~ne~~~~l~~~l~sl~~q~~~--~~eiiVvdd~s~D~t----~~~~---i~~~~~~~---~~~i~~i~~~~~~G~   69 (236)
T cd06435           2 IHVPCYEEPPEMVKETLDSLAALDYP--NFEVIVIDNNTKDEA----LWKP---VEAHCAQL---GERFRFFHVEPLPGA   69 (236)
T ss_pred             eeEeeCCCcHHHHHHHHHHHHhCCCC--CcEEEEEeCCCCchh----HHHH---HHHHHHHh---CCcEEEEEcCCCCCC
Confidence            789999986 7899999999998775  356666666653211    1111   22233332   135667777777776


Q ss_pred             -hHHHhhhcc-CCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          141 -QAQWLEAWW-PTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       141 -a~sIIEgwy-Pts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                       +.++-.++- ...+.++++++.+|..++|.++..|...+
T Consensus        70 ~~~a~n~g~~~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~  109 (236)
T cd06435          70 KAGALNYALERTAPDAEIIAVIDADYQVEPDWLKRLVPIF  109 (236)
T ss_pred             chHHHHHHHHhcCCCCCEEEEEcCCCCcCHHHHHHHHHHh
Confidence             554555532 12247899999999999999999887765

NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine

Probab=97.33  E-value=0.0021  Score=60.32  Aligned_cols=112  Identities=19%  Similarity=0.186  Sum_probs=72.7

Q ss_pred             EEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeec---CCc
Q 044432           62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRT---ANA  138 (584)
Q Consensus        62 IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~---~Nl  138 (584)
                      |++.+||..+.+.+||+||.+..   ...+++|--|++.+         .+.++++ . ..  ....++++++.   .|.
T Consensus         1 ViIp~~Ne~~~l~~~l~sl~~~~---~~~eIivvdd~S~D---------~t~~~~~-~-~~--~~~~v~~i~~~~~~~~~   64 (191)
T cd06436           1 VLVPCLNEEAVIQRTLASLLRNK---PNFLVLVIDDASDD---------DTAGIVR-L-AI--TDSRVHLLRRHLPNART   64 (191)
T ss_pred             CEEeccccHHHHHHHHHHHHhCC---CCeEEEEEECCCCc---------CHHHHHh-h-ee--cCCcEEEEeccCCcCCC
Confidence            67899999999999999999865   35667777777642         1233333 1 11  12357777653   466


Q ss_pred             chhHHHhhhccC-C--------C-CCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEee
Q 044432          139 GLQAQWLEAWWP-T--------S-DHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQ  199 (584)
Q Consensus       139 GLa~sIIEgwyP-t--------s-~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISLY  199 (584)
                      |-+.+.-.++.- .        + ..+.+++++.|..+.|.++..+..++.    +      |++.++.+.
T Consensus        65 Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~~----~------~~v~~v~~~  125 (191)
T cd06436          65 GKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYFS----D------PRVAGTQSR  125 (191)
T ss_pred             CHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhhc----C------CceEEEeee
Confidence            765444333211 1        0 246899999999999999998776541    2      467666543

N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=97.23  E-value=0.0036  Score=59.11  Aligned_cols=94  Identities=18%  Similarity=0.129  Sum_probs=66.0

Q ss_pred             EEEEcCCCc-hHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcch
Q 044432           62 IKVLTFNRL-NSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGL  140 (584)
Q Consensus        62 IvVfaYNRP-~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlGL  140 (584)
                      +++++||+. +.+.+||+||.+..     ..++| +|.....+     .   ....++      +...++++..+.|.|.
T Consensus         1 ~vI~~yn~~~~~l~~~l~sl~~q~-----~~iiv-vDn~s~~~-----~---~~~~~~------~~~~i~~i~~~~n~G~   60 (237)
T cd02526           1 AVVVTYNPDLSKLKELLAALAEQV-----DKVVV-VDNSSGND-----I---ELRLRL------NSEKIELIHLGENLGI   60 (237)
T ss_pred             CEEEEecCCHHHHHHHHHHHhccC-----CEEEE-EeCCCCcc-----H---HHHhhc------cCCcEEEEECCCceeh
Confidence            367899999 99999999999852     23444 55432111     1   111111      3357888999999998


Q ss_pred             hHHHhhhcc-CCC-CCceEEEEcCCceeChhHHHHHH
Q 044432          141 QAQWLEAWW-PTS-DHEFAFVVEDDLEVSPLFYKFLR  175 (584)
Q Consensus       141 a~sIIEgwy-Pts-~~e~VIVLEDDLeVSP~Fy~Ymn  175 (584)
                      +.+.=.|+- ... +++++++|.||..+.|.++.-|.
T Consensus        61 ~~a~N~g~~~a~~~~~d~v~~lD~D~~~~~~~l~~l~   97 (237)
T cd02526          61 AKALNIGIKAALENGADYVLLFDQDSVPPPDMVEKLL   97 (237)
T ss_pred             HHhhhHHHHHHHhCCCCEEEEECCCCCcCHhHHHHHH
Confidence            776666642 121 57999999999999999999985

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>PRK10073 putative glycosyl transferase; Provisional

Probab=97.22  E-value=0.0029  Score=65.72  Aligned_cols=104  Identities=17%  Similarity=0.219  Sum_probs=76.5

Q ss_pred             eEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHH-HhhccccCCCceEEEeecCC
Q 044432           59 TLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILR-FLDGFEWKFGDKFVHYRTAN  137 (584)
Q Consensus        59 ~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk-~L~gF~WP~g~vtIi~R~~N  137 (584)
                      .+.|++.+||+.+.+.+||+||.+..|.  ..+++|--|++.+++         .++++ +.+..    ..+++++ .+|
T Consensus         7 ~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~--~~EIIiVdDgStD~t---------~~i~~~~~~~~----~~i~vi~-~~n   70 (328)
T PRK10073          7 KLSIIIPLYNAGKDFRAFMESLIAQTWT--ALEIIIVNDGSTDNS---------VEIAKHYAENY----PHVRLLH-QAN   70 (328)
T ss_pred             eEEEEEeccCCHHHHHHHHHHHHhCCCC--CeEEEEEeCCCCccH---------HHHHHHHHhhC----CCEEEEE-CCC
Confidence            4899999999999999999999987763  578888889875322         23322 22322    4677765 569


Q ss_pred             cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHH
Q 044432          138 AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIV  179 (584)
Q Consensus       138 lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl  179 (584)
                      .|++.+.=.|.- ....+++++|++|-.+.|.++.-+-..+.
T Consensus        71 ~G~~~arN~gl~-~a~g~yi~flD~DD~~~p~~l~~l~~~~~  111 (328)
T PRK10073         71 AGVSVARNTGLA-VATGKYVAFPDADDVVYPTMYETLMTMAL  111 (328)
T ss_pred             CChHHHHHHHHH-hCCCCEEEEECCCCccChhHHHHHHHHHH
Confidence            999766555532 12568999999999999999988777654

>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional

Probab=97.20  E-value=0.015  Score=60.77  Aligned_cols=116  Identities=14%  Similarity=0.046  Sum_probs=82.9

Q ss_pred             CCceeEEEEEEcCCCchHHHHHHHHHhcCCC------CCCceeEEEEecCCCCCcCCCcchhhHHHHH-HHhhccccCCC
Q 044432           55 SSNFTLIIKVLTFNRLNSLSRCLHSLSAADY------LTDRVHLHVYVDHSAPLADQSSSESDSRAIL-RFLDGFEWKFG  127 (584)
Q Consensus        55 ~~~m~I~IvVfaYNRP~sLkRLL~SL~~AdY------~gd~v~L~IflD~pk~~s~~~~kVdevrell-k~L~gF~WP~g  127 (584)
                      .....+.|++.+||..+.+.++|+++.+...      .....+++|--|++++++         .+++ ++.+...=|..
T Consensus        67 ~~~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T---------~~i~~~~~~~~~~~~~  137 (333)
T PTZ00260         67 DSDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKT---------LKVAKDFWRQNINPNI  137 (333)
T ss_pred             CCCeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCch---------HHHHHHHHHhcCCCCC
Confidence            3466799999999999999999999876321      123567888888886432         2222 22222100223


Q ss_pred             ceEEEeecCCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          128 DKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       128 ~vtIi~R~~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      .+.++...+|.|.+.++-.|+. .+..+.+++++.|....|..+.-+-..+..
T Consensus       138 ~i~vi~~~~N~G~~~A~~~Gi~-~a~gd~I~~~DaD~~~~~~~l~~l~~~l~~  189 (333)
T PTZ00260        138 DIRLLSLLRNKGKGGAVRIGML-ASRGKYILMVDADGATDIDDFDKLEDIMLK  189 (333)
T ss_pred             cEEEEEcCCCCChHHHHHHHHH-HccCCEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            5888899999999888887753 225689999999999999998888777754

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1

Probab=97.18  E-value=0.0016  Score=59.42  Aligned_cols=103  Identities=19%  Similarity=0.089  Sum_probs=72.1

Q ss_pred             EEEEcCCCchHHHHHHHHHhcCCCC-CCceeEEEEecCCCCCcCCCcchhhHHHHHH-HhhccccCCCceEEEeecCCcc
Q 044432           62 IKVLTFNRLNSLSRCLHSLSAADYL-TDRVHLHVYVDHSAPLADQSSSESDSRAILR-FLDGFEWKFGDKFVHYRTANAG  139 (584)
Q Consensus        62 IvVfaYNRP~sLkRLL~SL~~AdY~-gd~v~L~IflD~pk~~s~~~~kVdevrellk-~L~gF~WP~g~vtIi~R~~NlG  139 (584)
                      |++.+||+++.+.++|++|.+.... ....++.|.-|++.++         +.++++ +....    .+++++....|.|
T Consensus         1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~---------t~~~~~~~~~~~----~~i~~i~~~~n~G   67 (181)
T cd04187           1 IVVPVYNEEENLPELYERLKAVLESLGYDYEIIFVDDGSTDR---------TLEILRELAARD----PRVKVIRLSRNFG   67 (181)
T ss_pred             CEEeecCchhhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCcc---------HHHHHHHHHhhC----CCEEEEEecCCCC
Confidence            5789999999999999999764321 2345788877776422         122222 22222    3678888889999


Q ss_pred             hhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          140 LQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       140 La~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      .+.++-.++- ....+.++++++|....|.++.=+..++
T Consensus        68 ~~~a~n~g~~-~a~~d~i~~~D~D~~~~~~~l~~l~~~~  105 (181)
T cd04187          68 QQAALLAGLD-HARGDAVITMDADLQDPPELIPEMLAKW  105 (181)
T ss_pred             cHHHHHHHHH-hcCCCEEEEEeCCCCCCHHHHHHHHHHH
Confidence            8777666632 2246899999999999999887777763

A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.

>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=97.17  E-value=0.0067  Score=50.72  Aligned_cols=101  Identities=16%  Similarity=0.061  Sum_probs=70.1

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecC
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTA  136 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~  136 (584)
                      .|.+.|++.+||+...+.++|+|+.+..+..  .++.|.-|++.+.+     ++.+.+   +....    ..+.......
T Consensus         2 ~~~~siiip~~n~~~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t-----~~~~~~---~~~~~----~~~~~~~~~~   67 (291)
T COG0463           2 MPKVSVVIPTYNEEEYLPEALESLLNQTYKD--FEIIVVDDGSTDGT-----TEIAIE---YGAKD----VRVIRLINER   67 (291)
T ss_pred             CccEEEEEeccchhhhHHHHHHHHHhhhhcc--eEEEEEeCCCCCCh-----HHHHHH---Hhhhc----ceEEEeeccc
Confidence            4678999999999999999999999987653  55777777765322     221122   21111    3566677789


Q ss_pred             CcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHH
Q 044432          137 NAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKF  173 (584)
Q Consensus       137 NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Y  173 (584)
                      |.|.+.+.-.++--. ..+.+..++.|.. .|..+..
T Consensus        68 ~~g~~~~~~~~~~~~-~~~~~~~~d~d~~-~~~~~~~  102 (291)
T COG0463          68 NGGLGAARNAGLEYA-RGDYIVFLDADDQ-HPPELIP  102 (291)
T ss_pred             CCChHHHHHhhHHhc-cCCEEEEEccCCC-CCHHHHH
Confidence            999988877775212 2278888888888 7777666

>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation

Probab=97.11  E-value=0.0017  Score=60.97  Aligned_cols=105  Identities=12%  Similarity=0.005  Sum_probs=75.9

Q ss_pred             EEEEcCCCchHHHHHHHHHhcCCC--CCCceeEEEEecCCCCCcCCCcchhhHHHHHH-HhhccccCCCceEEEeecCCc
Q 044432           62 IKVLTFNRLNSLSRCLHSLSAADY--LTDRVHLHVYVDHSAPLADQSSSESDSRAILR-FLDGFEWKFGDKFVHYRTANA  138 (584)
Q Consensus        62 IvVfaYNRP~sLkRLL~SL~~AdY--~gd~v~L~IflD~pk~~s~~~~kVdevrellk-~L~gF~WP~g~vtIi~R~~Nl  138 (584)
                      |++.+||..+.+.++|++|.+..+  .....+++|--|++.+.         +.++++ +....  |. .+++++...|.
T Consensus         1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~---------t~~~~~~~~~~~--~~-~i~~i~~~~n~   68 (211)
T cd04188           1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDG---------TAEVARKLARKN--PA-LIRVLTLPKNR   68 (211)
T ss_pred             CEEcccChHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCc---------hHHHHHHHHHhC--CC-cEEEEEcccCC
Confidence            678999999999999999988533  12346788877776432         233332 22322  21 25788889999


Q ss_pred             chhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHH
Q 044432          139 GLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIV  179 (584)
Q Consensus       139 GLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl  179 (584)
                      |.+.++..|+.-. ..++++++++|....|.++.-+-..+.
T Consensus        69 G~~~a~~~g~~~a-~gd~i~~ld~D~~~~~~~l~~l~~~~~  108 (211)
T cd04188          69 GKGGAVRAGMLAA-RGDYILFADADLATPFEELEKLEEALK  108 (211)
T ss_pred             CcHHHHHHHHHHh-cCCEEEEEeCCCCCCHHHHHHHHHHHh
Confidence            9999888886433 358999999999999999988777753

UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=97.11  E-value=0.0095  Score=62.83  Aligned_cols=113  Identities=16%  Similarity=0.140  Sum_probs=72.2

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHH-HhhccccCCCceEEEeec
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILR-FLDGFEWKFGDKFVHYRT  135 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk-~L~gF~WP~g~vtIi~R~  135 (584)
                      ...+.|++.+||..+.+.+||+||.+.+|.. ..+++|--|++.++         +.++++ +.+.+. .+..+++++.+
T Consensus        39 ~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~---------T~~i~~~~~~~~~-~~~~i~vi~~~  107 (384)
T TIGR03469        39 WPAVVAVVPARNEADVIGECVTSLLEQDYPG-KLHVILVDDHSTDG---------TADIARAAARAYG-RGDRLTVVSGQ  107 (384)
T ss_pred             CCCEEEEEecCCcHhHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCc---------HHHHHHHHHHhcC-CCCcEEEecCC
Confidence            3458999999999999999999999988874 46788877776422         223322 222231 01256666533


Q ss_pred             C----CcchhHHHhhhccC-CC---CCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          136 A----NAGLQAQWLEAWWP-TS---DHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       136 ~----NlGLa~sIIEgwyP-ts---~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      .    ..|-..+.-.|..- .+   ..+.++++++|+++.|+++.=+...+.+
T Consensus       108 ~~~~g~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~  160 (384)
T TIGR03469       108 PLPPGWSGKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARARA  160 (384)
T ss_pred             CCCCCCcchHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHHHh
Confidence            2    23432222222211 11   2789999999999999998877776643

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>PRK10018 putative glycosyl transferase; Provisional

Probab=97.11  E-value=0.0058  Score=62.54  Aligned_cols=108  Identities=18%  Similarity=0.128  Sum_probs=79.6

Q ss_pred             eeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCC
Q 044432           58 FTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTAN  137 (584)
Q Consensus        58 m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~N  137 (584)
                      ..+.|++.+||+++.+.++|+|+.+..|.  ..+|+|--|++..       .+.   +.++++.+..  ..+++++.+.|
T Consensus         5 p~VSVIip~yN~~~~l~~~l~Svl~Qt~~--~~EiIVVDDgS~~-------~~~---~~~~~~~~~~--~ri~~i~~~~n   70 (279)
T PRK10018          5 PLISIYMPTWNRQQLAIRAIKSVLRQDYS--NWEMIIVDDCSTS-------WEQ---LQQYVTALND--PRITYIHNDIN   70 (279)
T ss_pred             CEEEEEEEeCCCHHHHHHHHHHHHhCCCC--CeEEEEEECCCCC-------HHH---HHHHHHHcCC--CCEEEEECCCC
Confidence            35899999999999999999999987764  5788888888641       222   2344454433  47888888999


Q ss_pred             cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          138 AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       138 lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      .|.+.+.-.|.- ....+++++|++|-+..|..+.=+-..+..
T Consensus        71 ~G~~~a~N~gi~-~a~g~~I~~lDaDD~~~p~~l~~~~~~~~~  112 (279)
T PRK10018         71 SGACAVRNQAIM-LAQGEYITGIDDDDEWTPNRLSVFLAHKQQ  112 (279)
T ss_pred             CCHHHHHHHHHH-HcCCCEEEEECCCCCCCccHHHHHHHHHHh
Confidence            999765555521 125789999999999999998766555543

>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function

Probab=97.08  E-value=0.0038  Score=58.20  Aligned_cols=93  Identities=18%  Similarity=0.144  Sum_probs=62.3

Q ss_pred             EEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcc
Q 044432           60 LIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAG  139 (584)
Q Consensus        60 I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlG  139 (584)
                      +.|++.+||+++.+.++|+||.+..+  ...+++|--|++.++.         .+   .++.     ..+.++  ..+.|
T Consensus         1 vsvii~~~n~~~~l~~~l~sl~~q~~--~~~evivvdd~s~d~~---------~~---~~~~-----~~~~~~--~~~~g   59 (221)
T cd02522           1 LSIIIPTLNEAENLPRLLASLRRLNP--LPLEIIVVDGGSTDGT---------VA---IARS-----AGVVVI--SSPKG   59 (221)
T ss_pred             CEEEEEccCcHHHHHHHHHHHHhccC--CCcEEEEEeCCCCccH---------HH---HHhc-----CCeEEE--eCCcC
Confidence            46889999999999999999998766  4567877766653211         12   2222     133333  34455


Q ss_pred             hhHHHhhhccCCCCCceEEEEcCCceeChhHHHHH
Q 044432          140 LQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFL  174 (584)
Q Consensus       140 La~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ym  174 (584)
                      .+...-.++- ....++++++++|.++.|.++.=|
T Consensus        60 ~~~a~n~g~~-~a~~~~i~~~D~D~~~~~~~l~~l   93 (221)
T cd02522          60 RARQMNAGAA-AARGDWLLFLHADTRLPPDWDAAI   93 (221)
T ss_pred             HHHHHHHHHH-hccCCEEEEEcCCCCCChhHHHHH
Confidence            5444433421 124789999999999999888877

Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>COG1216 Predicted glycosyltransferases [General function prediction only]

Probab=96.96  E-value=0.0073  Score=61.47  Aligned_cols=111  Identities=22%  Similarity=0.285  Sum_probs=78.2

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecC
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTA  136 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~  136 (584)
                      .+.+.|++++|||.+.+..||++|.++.+..   ..+|.+|......    ..+    ..+  ..+   .+.+++++-..
T Consensus         2 ~~~i~~iiv~yn~~~~l~~~l~~l~~~~~~~---~~iv~vDn~s~d~----~~~----~~~--~~~---~~~v~~i~~~~   65 (305)
T COG1216           2 MPKISIIIVTYNRGEDLVECLASLAAQTYPD---DVIVVVDNGSTDG----SLE----ALK--ARF---FPNVRLIENGE   65 (305)
T ss_pred             CcceEEEEEecCCHHHHHHHHHHHhcCCCCC---cEEEEccCCCCCC----CHH----HHH--hhc---CCcEEEEEcCC
Confidence            3568999999999999999999999988763   2223455443211    121    111  111   37899999999


Q ss_pred             CcchhHHHhhhc-cCCCC-CceEEEEcCCceeChhHHHHHHHHHHhhcc
Q 044432          137 NAGLQAQWLEAW-WPTSD-HEFAFVVEDDLEVSPLFYKFLRGLIVNYYY  183 (584)
Q Consensus       137 NlGLa~sIIEgw-yPts~-~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Y  183 (584)
                      |+|-+...=.|. +.... ++++++|-||+++.|.++.=|-.+++++..
T Consensus        66 NlG~agg~n~g~~~a~~~~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~  114 (305)
T COG1216          66 NLGFAGGFNRGIKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPA  114 (305)
T ss_pred             CccchhhhhHHHHHHhcCCCcEEEEEcCCeeeChhHHHHHHHHHHhCCC
Confidence            999976655553 22222 338999999999999999888888766543

>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide

Probab=96.87  E-value=0.0083  Score=58.06  Aligned_cols=97  Identities=20%  Similarity=0.208  Sum_probs=67.8

Q ss_pred             EEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcc
Q 044432           60 LIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAG  139 (584)
Q Consensus        60 I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlG  139 (584)
                      |.|++.+||+.+.+.+||+||....     .+++|--|++.+         .+.+   .++.+     .+.+++. .+.|
T Consensus         2 isvii~~~Ne~~~l~~~l~sl~~~~-----~eiivvD~gStD---------~t~~---i~~~~-----~~~v~~~-~~~g   58 (229)
T cd02511           2 LSVVIITKNEERNIERCLESVKWAV-----DEIIVVDSGSTD---------RTVE---IAKEY-----GAKVYQR-WWDG   58 (229)
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhccc-----CEEEEEeCCCCc---------cHHH---HHHHc-----CCEEEEC-CCCC
Confidence            6789999999999999999998641     156776666532         2233   33333     3456665 8888


Q ss_pred             hhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          140 LQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       140 La~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      .+.+.=.+.- ....+.+++|++|..++|.++.-+...+..
T Consensus        59 ~~~~~n~~~~-~a~~d~vl~lDaD~~~~~~~~~~l~~~~~~   98 (229)
T cd02511          59 FGAQRNFALE-LATNDWVLSLDADERLTPELADEILALLAT   98 (229)
T ss_pred             hHHHHHHHHH-hCCCCEEEEEeCCcCcCHHHHHHHHHHHhC
Confidence            7554433321 124679999999999999999988887644

UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.

>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming)

Probab=96.87  E-value=0.021  Score=65.58  Aligned_cols=114  Identities=15%  Similarity=0.166  Sum_probs=76.2

Q ss_pred             eEEEEEEcCCCchHH-HHHHHHHhcCCCCCCceeEEEEecCCCCCcC-CCcch-h----hHHHHHHHhhccccCCCceEE
Q 044432           59 TLIIKVLTFNRLNSL-SRCLHSLSAADYLTDRVHLHVYVDHSAPLAD-QSSSE-S----DSRAILRFLDGFEWKFGDKFV  131 (584)
Q Consensus        59 ~I~IvVfaYNRP~sL-kRLL~SL~~AdY~gd~v~L~IflD~pk~~s~-~~~kV-d----evrellk~L~gF~WP~g~vtI  131 (584)
                      ++.|++.+||.+.++ +++|+++.+.+|+.+..+++|--|++.+++. +++.+ .    ...++.++.+..     .+..
T Consensus       132 ~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~-----~v~y  206 (713)
T TIGR03030       132 TVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKL-----GVNY  206 (713)
T ss_pred             eeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHc-----CcEE
Confidence            588999999998766 6799999999999888899999999754321 11101 0    112333343433     5667


Q ss_pred             EeecCCcch-hHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          132 HYRTANAGL-QAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       132 i~R~~NlGL-a~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      +.|+.|.|- +.++=.+.. ..+.+++++++.|.++.|+|+.-+-..+
T Consensus       207 i~r~~n~~~KAgnLN~al~-~a~gd~Il~lDAD~v~~pd~L~~~v~~f  253 (713)
T TIGR03030       207 ITRPRNVHAKAGNINNALK-HTDGELILIFDADHVPTRDFLQRTVGWF  253 (713)
T ss_pred             EECCCCCCCChHHHHHHHH-hcCCCEEEEECCCCCcChhHHHHHHHHH
Confidence            778887643 333323321 1256899999999999999987665544

Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.

>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan

Probab=96.65  E-value=0.027  Score=56.90  Aligned_cols=121  Identities=15%  Similarity=0.127  Sum_probs=81.0

Q ss_pred             EEEEEcCCCchH-HHHHHHHHhc----CCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccC-CCceEEEee
Q 044432           61 IIKVLTFNRLNS-LSRCLHSLSA----ADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWK-FGDKFVHYR  134 (584)
Q Consensus        61 ~IvVfaYNRP~s-LkRLL~SL~~----AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP-~g~vtIi~R  134 (584)
                      .|++.+||-+.. +..+|++..+    .+|. ...+++|--|+..++.    .+.+-..+.+..+.+  | .-.+.+++|
T Consensus         2 SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~-~~~eI~vldD~~d~~~----~~~~~~~~~~l~~~~--~~~~~v~~~~r   74 (254)
T cd04191           2 AIVMPVYNEDPARVFAGLRAMYESLAKTGLA-DHFDFFILSDTRDPDI----WLAEEAAWLDLCEEL--GAQGRIYYRRR   74 (254)
T ss_pred             EEEEeCCCCCHHHHHHHHHHHHHHHHhcCCc-CceEEEEECCCCChHH----HHHHHHHHHHHHHHh--CCCCcEEEEEc
Confidence            588999998876 7777877654    3442 2467766666643211    121112223333333  3 236889999


Q ss_pred             cCCcchhHHHhhhccCC--CCCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEE
Q 044432          135 TANAGLQAQWLEAWWPT--SDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGAS  197 (584)
Q Consensus       135 ~~NlGLa~sIIEgwyPt--s~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GIS  197 (584)
                      +.|.|.....+..+...  +.++++++++-|..+.|.|+..+-..+..   +      |+|..|.
T Consensus        75 ~~~~g~Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~~l~~~v~~~~~---~------~~vg~vq  130 (254)
T cd04191          75 RENTGRKAGNIADFCRRWGSRYDYMVVLDADSLMSGDTIVRLVRRMEA---N------PRAGIIQ  130 (254)
T ss_pred             CCCCCccHHHHHHHHHHhCCCCCEEEEEeCCCCCCHHHHHHHHHHHHh---C------CCEEEEe
Confidence            99999977666665432  47899999999999999999998887643   3      5777775

Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.

>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine

Probab=96.61  E-value=0.02  Score=54.11  Aligned_cols=105  Identities=18%  Similarity=0.169  Sum_probs=68.1

Q ss_pred             EEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEee----cCC
Q 044432           62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYR----TAN  137 (584)
Q Consensus        62 IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R----~~N  137 (584)
                      |++.+||+.+.|.+||+||.+..|. ...+++|--|++.+.+     .+.   +.++......  ..++++.+    ..|
T Consensus         1 ViIp~yn~~~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t-----~~i---~~~~~~~~~~--~~~~~~~~~~~~~~~   69 (219)
T cd06913           1 IILPVHNGEQWLDECLESVLQQDFE-GTLELSVFNDASTDKS-----AEI---IEKWRKKLED--SGVIVLVGSHNSPSP   69 (219)
T ss_pred             CEEeecCcHHHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccH-----HHH---HHHHHHhCcc--cCeEEEEecccCCCC
Confidence            6789999999999999999987765 3578888888864321     111   1223333322  24444432    245


Q ss_pred             cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          138 AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       138 lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      .|.+.+.-.|+- .+..+.+++|++|..+.|.++.-+-.++
T Consensus        70 ~G~~~a~N~g~~-~a~gd~i~~lD~D~~~~~~~l~~~~~~~  109 (219)
T cd06913          70 KGVGYAKNQAIA-QSSGRYLCFLDSDDVMMPQRIRLQYEAA  109 (219)
T ss_pred             ccHHHHHHHHHH-hcCCCEEEEECCCccCChhHHHHHHHHH
Confidence            677554434421 2357899999999999998887654444

This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.

>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional

Probab=96.57  E-value=0.039  Score=65.11  Aligned_cols=103  Identities=17%  Similarity=0.145  Sum_probs=74.2

Q ss_pred             eeEEEEEEcCCCchH-HHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecC
Q 044432           58 FTLIIKVLTFNRLNS-LSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTA  136 (584)
Q Consensus        58 m~I~IvVfaYNRP~s-LkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~  136 (584)
                      ..+.|++.+||.+.. +++++.++.+-+|+.+..+++|--|++++         ++++   +++.+     .+++++|+.
T Consensus       260 P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D---------~t~~---la~~~-----~v~yI~R~~  322 (852)
T PRK11498        260 PTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGRE---------EFRQ---FAQEV-----GVKYIARPT  322 (852)
T ss_pred             CcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCCh---------HHHH---HHHHC-----CcEEEEeCC
Confidence            358999999999854 57899999888999888899999998752         2233   33443     466777877


Q ss_pred             Ccc-hhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          137 NAG-LQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       137 NlG-La~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      |.| -+.++=.+.- ..+.+++++++.|.++.|+|+.-+....
T Consensus       323 n~~gKAGnLN~aL~-~a~GEyIavlDAD~ip~pdfL~~~V~~f  364 (852)
T PRK11498        323 HEHAKAGNINNALK-YAKGEFVAIFDCDHVPTRSFLQMTMGWF  364 (852)
T ss_pred             CCcchHHHHHHHHH-hCCCCEEEEECCCCCCChHHHHHHHHHH
Confidence            654 3433323321 1367899999999999999998766543

>PRK10063 putative glycosyl transferase; Provisional

Probab=96.41  E-value=0.027  Score=56.19  Aligned_cols=105  Identities=15%  Similarity=0.100  Sum_probs=69.0

Q ss_pred             eeEEEEEEcCCCchHHHHHHHHHhcC-CCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecC
Q 044432           58 FTLIIKVLTFNRLNSLSRCLHSLSAA-DYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTA  136 (584)
Q Consensus        58 m~I~IvVfaYNRP~sLkRLL~SL~~A-dY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~  136 (584)
                      |.+.|++++||..+.+.++|+||.+. .......+++|-=|++.+.         +.+   .++.+.=. ..++++. ..
T Consensus         1 ~~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~---------t~~---i~~~~~~~-~~i~~i~-~~   66 (248)
T PRK10063          1 MLLSVITVAFRNLEGIVKTHASLRHLAQDPGISFEWIVVDGGSNDG---------TRE---FLENLNGI-FNLRFVS-EP   66 (248)
T ss_pred             CeEEEEEEeCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEECcCccc---------HHH---HHHHhccc-CCEEEEE-CC
Confidence            46889999999999999999999752 2223456777777776421         223   33333100 1355665 45


Q ss_pred             CcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHH
Q 044432          137 NAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGL  177 (584)
Q Consensus       137 NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~A  177 (584)
                      |.|.+.+.=.|.. ....+.++.|.+|-...|..+..+.+.
T Consensus        67 ~~G~~~A~N~Gi~-~a~g~~v~~ld~DD~~~~~~~~~~~~~  106 (248)
T PRK10063         67 DNGIYDAMNKGIA-MAQGRFALFLNSGDIFHQDAANFVRQL  106 (248)
T ss_pred             CCCHHHHHHHHHH-HcCCCEEEEEeCCcccCcCHHHHHHHH
Confidence            7799877666632 125689999997777788877776654

>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional

Probab=96.35  E-value=0.041  Score=57.28  Aligned_cols=111  Identities=14%  Similarity=0.077  Sum_probs=78.3

Q ss_pred             CceeEEEEEEcCCCchHHHHHHHHHhcCC-CCCCceeEEEEecCCCCCcCCCcchhhHHHHHHH-hhccccCCCceEEEe
Q 044432           56 SNFTLIIKVLTFNRLNSLSRCLHSLSAAD-YLTDRVHLHVYVDHSAPLADQSSSESDSRAILRF-LDGFEWKFGDKFVHY  133 (584)
Q Consensus        56 ~~m~I~IvVfaYNRP~sLkRLL~SL~~Ad-Y~gd~v~L~IflD~pk~~s~~~~kVdevrellk~-L~gF~WP~g~vtIi~  133 (584)
                      +...+.|++.+||..+++.+++++|.++- ....+.++.|--|++.+.+         .++++- .+..   ..++.++.
T Consensus         4 ~~~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EIIvVDDgS~D~T---------~~il~~~~~~~---~~~v~~i~   71 (325)
T PRK10714          4 PIKKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNS---------AEMLVEAAQAP---DSHIVAIL   71 (325)
T ss_pred             CCCeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEEEEEeCCCCCcH---------HHHHHHHHhhc---CCcEEEEE
Confidence            34569999999999999999999886531 1223567877778775322         233222 2211   13566666


Q ss_pred             ecCCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHH
Q 044432          134 RTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIV  179 (584)
Q Consensus       134 R~~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl  179 (584)
                      ...|.|.+.++..|+- ....+.++++++|....|..+.-|-+++.
T Consensus        72 ~~~n~G~~~A~~~G~~-~A~gd~vv~~DaD~q~~p~~i~~l~~~~~  116 (325)
T PRK10714         72 LNRNYGQHSAIMAGFS-HVTGDLIITLDADLQNPPEEIPRLVAKAD  116 (325)
T ss_pred             eCCCCCHHHHHHHHHH-hCCCCEEEEECCCCCCCHHHHHHHHHHHH
Confidence            7889999888888752 22578999999999999999988888774

>PRK05454 glucosyltransferase MdoH; Provisional

Probab=96.31  E-value=0.045  Score=63.24  Aligned_cols=129  Identities=16%  Similarity=0.094  Sum_probs=86.3

Q ss_pred             CCCceeEEEEEEcCCCc-----hHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCc
Q 044432           54 HSSNFTLIIKVLTFNRL-----NSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGD  128 (584)
Q Consensus        54 ~~~~m~I~IvVfaYNRP-----~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~  128 (584)
                      .+....+.|++.+||-.     +.++.+++||.+.+|. +..+++|-.|+..++.   ...+ -.++.+..+.+. +.++
T Consensus       120 ~~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~-~~~e~~vLdD~~d~~~---~~~e-~~~~~~L~~~~~-~~~~  193 (691)
T PRK05454        120 PPPEARTAILMPIYNEDPARVFAGLRAMYESLAATGHG-AHFDFFILSDTRDPDI---AAAE-EAAWLELRAELG-GEGR  193 (691)
T ss_pred             CCCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCC-CCEEEEEEECCCChhH---HHHH-HHHHHHHHHhcC-CCCc
Confidence            34466789999999976     3589999999988875 4788899999875332   1111 122333333331 2357


Q ss_pred             eEEEeecCCcchhH-HHhhhcc-CCCCCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEE
Q 044432          129 KFVHYRTANAGLQA-QWLEAWW-PTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGAS  197 (584)
Q Consensus       129 vtIi~R~~NlGLa~-sIIEgwy-Pts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GIS  197 (584)
                      +.+++|..|.|=+. ++-+... -..++++++||+-|..++|+|+.-|-..+..   +      |++.-|.
T Consensus       194 i~yr~R~~n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d~L~~lv~~m~~---d------P~vGlVQ  255 (691)
T PRK05454        194 IFYRRRRRNVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGDTLVRLVRLMEA---N------PRAGLIQ  255 (691)
T ss_pred             EEEEECCcCCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHHHHHHHHHHHhh---C------cCEEEEe
Confidence            88888999887533 3322211 1247899999999999999999888876533   3      4666664

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=96.25  E-value=0.025  Score=56.08  Aligned_cols=97  Identities=12%  Similarity=0.031  Sum_probs=66.2

Q ss_pred             EcCCC-chHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcchhHH
Q 044432           65 LTFNR-LNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGLQAQ  143 (584)
Q Consensus        65 faYNR-P~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlGLa~s  143 (584)
                      ++||| .+.|+++|+||.+..+     +++|.=+++.++       +   .+.+.++.+    ..+++++..+|.|.+.+
T Consensus         1 Vtyn~~~~~l~~~l~sl~~q~~-----~iiVVDN~S~~~-------~---~~~~~~~~~----~~i~~i~~~~N~G~a~a   61 (281)
T TIGR01556         1 VTFNPDLEHLGELITSLPKQVD-----RIIAVDNSPHSD-------Q---PLKNARLRG----QKIALIHLGDNQGIAGA   61 (281)
T ss_pred             CccCccHHHHHHHHHHHHhcCC-----EEEEEECcCCCc-------H---hHHHHhccC----CCeEEEECCCCcchHHH
Confidence            48998 5899999999998532     344444443211       1   222233433    47889999999999877


Q ss_pred             Hhhhc-cCC-CCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          144 WLEAW-WPT-SDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       144 IIEgw-yPt-s~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      .=.|. +.. ...+++++|.||..+.|.++.-+..++..
T Consensus        62 ~N~Gi~~a~~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~  100 (281)
T TIGR01556        62 QNQGLDASFRRGVQGVLLLDQDSRPGNAFLAAQWKLLSA  100 (281)
T ss_pred             HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHh
Confidence            66654 211 25789999999999999988877766543

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin

Probab=96.12  E-value=0.038  Score=54.27  Aligned_cols=103  Identities=19%  Similarity=0.220  Sum_probs=71.2

Q ss_pred             EEEEcCCCc-hHHHHHHHHHhcCCCC--------CCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEE
Q 044432           62 IKVLTFNRL-NSLSRCLHSLSAADYL--------TDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVH  132 (584)
Q Consensus        62 IvVfaYNRP-~sLkRLL~SL~~AdY~--------gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi  132 (584)
                      |++.+||.+ ..+.++|+||.+.+|.        .+..+++|-.|+..+.+  ..|.   ..       ..|        
T Consensus         1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d~~--~gk~---~~-------~~~--------   60 (244)
T cd04190           1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIKKN--RGKR---DS-------QLW--------   60 (244)
T ss_pred             CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccccc--Ccch---HH-------HHH--------
Confidence            678999996 7899999999999998        66789999999974210  0000   00       000        


Q ss_pred             eecCCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEeecC
Q 044432          133 YRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRP  201 (584)
Q Consensus       133 ~R~~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISLY~P  201 (584)
                            ++ +.+.++ ......+.+++++.|..+.|+++..|...+..   +      |++.+|.+..-
T Consensus        61 ------~~-~~~~~~-~~~a~~e~i~~~DaD~~~~~~~l~~l~~~~~~---~------p~vg~v~g~~~  112 (244)
T cd04190          61 ------FF-NYFCRV-LFPDDPEFILLVDADTKFDPDSIVQLYKAMDK---D------PEIGGVCGEIH  112 (244)
T ss_pred             ------HH-HHHHHH-hhcCCCCEEEEECCCCcCCHhHHHHHHHHHHh---C------CCEEEEEeeeE
Confidence                  00 111122 01236899999999999999999999888743   3      58888888753

Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=95.69  E-value=0.23  Score=51.80  Aligned_cols=106  Identities=19%  Similarity=0.191  Sum_probs=77.4

Q ss_pred             eeEEEEEEcCCCch-HHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHh-hccccCCCceEEEee-
Q 044432           58 FTLIIKVLTFNRLN-SLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFL-DGFEWKFGDKFVHYR-  134 (584)
Q Consensus        58 m~I~IvVfaYNRP~-sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L-~gF~WP~g~vtIi~R-  134 (584)
                      ..+.|++.+||-+. -++++++|+.+.+|+.  .+++|-.|++.         |++.++++.. ..+  + ..+.++.. 
T Consensus        54 p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~---------d~~~~~~~~~~~~~--~-~~~~~~~~~  119 (439)
T COG1215          54 PKVSVIIPAYNEEPEVLEETLESLLSQDYPR--YEVIVVDDGST---------DETYEILEELGAEY--G-PNFRVIYPE  119 (439)
T ss_pred             CceEEEEecCCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCC---------hhHHHHHHHHHhhc--C-cceEEEecc
Confidence            45789999999888 9999999999999975  67788888664         2223333322 222  1 24444433 


Q ss_pred             cCCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          135 TANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       135 ~~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      ..|.|-+.+...+..-. +.+.+++++-|..+.|+|+..|...+
T Consensus       120 ~~~~gK~~al~~~l~~~-~~d~V~~~DaD~~~~~d~l~~~~~~f  162 (439)
T COG1215         120 KKNGGKAGALNNGLKRA-KGDVVVILDADTVPEPDALRELVSPF  162 (439)
T ss_pred             ccCccchHHHHHHHhhc-CCCEEEEEcCCCCCChhHHHHHHhhh
Confidence            57888788887774323 48999999999999999999888775

>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional

Probab=95.28  E-value=0.11  Score=53.86  Aligned_cols=109  Identities=13%  Similarity=0.090  Sum_probs=69.6

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccc--cCCCceEEEee
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFE--WKFGDKFVHYR  134 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~--WP~g~vtIi~R  134 (584)
                      ...+.|++.+||..+++.++|+||.+..+.....+++|--|++.+         .+.++   ++.+.  .-.....+...
T Consensus        30 ~~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD---------~T~~i---a~~~~~~v~~~~~~~~~~   97 (306)
T PRK13915         30 GRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDELIVIDSGSTD---------ATAER---AAAAGARVVSREEILPEL   97 (306)
T ss_pred             CCCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEEEEEeCCCcc---------HHHHH---HHHhcchhhcchhhhhcc
Confidence            456899999999999999999999975431223467776666542         12222   22221  00001112223


Q ss_pred             cCCcchhHHHhhhccCCCCCceEEEEcCCce-eChhHHHHHHHHH
Q 044432          135 TANAGLQAQWLEAWWPTSDHEFAFVVEDDLE-VSPLFYKFLRGLI  178 (584)
Q Consensus       135 ~~NlGLa~sIIEgwyPts~~e~VIVLEDDLe-VSP~Fy~Ymn~AL  178 (584)
                      ..|.|.+.++-.|+. ....+.+++++.|+. ..|.++.=+-..+
T Consensus        98 ~~n~Gkg~A~~~g~~-~a~gd~vv~lDaD~~~~~p~~l~~l~~~l  141 (306)
T PRK13915         98 PPRPGKGEALWRSLA-ATTGDIVVFVDADLINFDPMFVPGLLGPL  141 (306)
T ss_pred             ccCCCHHHHHHHHHH-hcCCCEEEEEeCccccCCHHHHHHHHHHH
Confidence            678898887767643 225789999999996 8998876555554

>KOG2791 consensus N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]

Probab=94.25  E-value=0.46  Score=51.42  Aligned_cols=202  Identities=13%  Similarity=0.120  Sum_probs=112.3

Q ss_pred             CCCceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEe
Q 044432           54 HSSNFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHY  133 (584)
Q Consensus        54 ~~~~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~  133 (584)
                      +..+-++.+++-+.|||.-|+-|++||+++.-- +++-|++.-|+-         +++..+   .+++.+.  +.|.-+.
T Consensus       113 dla~~~~vlV~qVHnRp~Ylr~lveSlrk~kGI-~~tLlifSHD~~---------~~eiN~---~I~~i~F--c~V~QiF  177 (455)
T KOG2791|consen  113 DLAKDRVVLVLQVHNRPQYLRVLVESLRKVKGI-SETLLIFSHDGY---------FEEINR---IIESIKF--CQVKQIF  177 (455)
T ss_pred             ccccceEEEEEEEcCcHHHHHHHHHHHHhccCc-cceEEEEeccch---------HHHHHH---HHhhccc--ceeEEEe
Confidence            455667889999999999999999999998633 455455555553         444344   4444332  3333222


Q ss_pred             ecCCc---------------------------ch---------------------------hHHHhhhccCCC-CCceEE
Q 044432          134 RTANA---------------------------GL---------------------------QAQWLEAWWPTS-DHEFAF  158 (584)
Q Consensus       134 R~~Nl---------------------------GL---------------------------a~sIIEgwyPts-~~e~VI  158 (584)
                      -+-+.                           |+                           .+-+-++.--+. ..++++
T Consensus       178 ~Pys~qlypt~FPG~~p~DCp~kmkk~~a~k~~C~n~ssPD~yGnyR~ak~~q~KHHWWWkmnfVwd~ve~~~~~~g~iL  257 (455)
T KOG2791|consen  178 SPYSPQLYPTSFPGVTPNDCPNKMKKGDAAKGHCENNSSPDQYGNYRSAKIVQLKHHWWWKMNFVWDGVEETKGHEGHIL  257 (455)
T ss_pred             cCCCcccccCcCCCCCchhcccccccchhhhcCCcCCCCcccccCccchhhhhhhhhhhHhHHHHHHHHHHhccCCceEE
Confidence            22211                           11                           111122211122 356999


Q ss_pred             EEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEeecCCCCCCCCCCcccCCCCCCceee-ecCCcchhhcCccc
Q 044432          159 VVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLY-QLVGTWGQLLFPQP  237 (584)
Q Consensus       159 VLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISLY~P~f~~~k~~~~i~~d~~~d~FL~-Q~PsSWGwatw~d~  237 (584)
                      +||.|-.+.|+||+=++..... +-    ..=|.-+-+||-.+. ...+    -..| .-+.-+| -....=|-+.-+..
T Consensus       258 flEEDH~LaPdayhv~~~l~~l-kp----~~Cp~C~~~sLg~y~-s~sr----yGqD-~~~v~~w~s~~hNmG~al~rn~  326 (455)
T KOG2791|consen  258 FLEEDHFLAPDAYHVIQTLTRL-KP----AKCPDCFAASLGPYD-SKSR----YGQD-EGLVSLWASRMHNMGYALNRNV  326 (455)
T ss_pred             EEecccccChhHHHHHHHHHhc-Cc----ccCCcceeeeccccc-cccc----cccc-ccceeehhhhcccchhhhhHHH
Confidence            9999999999999998877532 21    122455555554332 1101    0001 1122222 24466788999999


Q ss_pred             hHHHHHHHHHhhh---cC---------CCCccccc------ccceeccccccccccCCCCCC
Q 044432          238 WKEFRLWYDDHKA---RG---------IKPFLDGM------RALSVSHRDAGVNYGKSAGPD  281 (584)
Q Consensus       238 WkeF~~w~~~~~~---~g---------~~P~Le~m------rSlstnh~~aGvh~~~~~~pd  281 (584)
                      |+..+.--+..=.   .+         .+-+...+      |--.+-..+-|+|-++..-|+
T Consensus       327 wqki~~c~~~FC~~DDYNWDwtl~~~~~~clp~~~~vl~~~~pr~~H~GdCG~H~~~~ce~~  388 (455)
T KOG2791|consen  327 WQKIHQCAREFCFFDDYNWDWTLWATVFPCLPSPVYVLRGPRPRAVHFGDCGLHQGRGCEGD  388 (455)
T ss_pred             HHHHHHhHHhhcccccCCcceeehhhhccccCcceEEeecCCCceEEecccccccCCCCCcc
Confidence            9988864432111   11         11111111      333444589999999888776

>PRK14716 bacteriophage N4 adsorption protein B; Provisional

Probab=93.40  E-value=0.54  Score=52.70  Aligned_cols=108  Identities=12%  Similarity=0.139  Sum_probs=65.5

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHH-hcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceE--EEe
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSL-SAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKF--VHY  133 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL-~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vt--Ii~  133 (584)
                      ...+.|+|.+||-.+.+.++|+|+ .+-+|.  ..+++|-.|+..+.+     .+.+   .+..+.+  |  +++  +..
T Consensus        65 ~p~vaIlIPA~NE~~vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T-----~~~v---~~l~~~~--p--~v~~vv~~  130 (504)
T PRK14716         65 EKRIAIFVPAWREADVIGRMLEHNLATLDYE--NYRIFVGTYPNDPAT-----LREV---DRLAARY--P--RVHLVIVP  130 (504)
T ss_pred             CCceEEEEeccCchhHHHHHHHHHHHcCCCC--CeEEEEEECCCChhH-----HHHH---HHHHHHC--C--CeEEEEeC
Confidence            556899999999999999999985 667883  567777776543211     1211   2222333  3  343  332


Q ss_pred             ecCCcchhHHH---hhhc--c---CCCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          134 RTANAGLQAQW---LEAW--W---PTSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       134 R~~NlGLa~sI---IEgw--y---Pts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      +....|=+...   ++..  .   ....++.+++++-|..++|++++.+++.+
T Consensus       131 ~~gp~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~  183 (504)
T PRK14716        131 HDGPTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLL  183 (504)
T ss_pred             CCCCCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhc
Confidence            22221222222   2110  0   11256899999999999999999887653

>PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum

Probab=92.65  E-value=1.5  Score=46.25  Aligned_cols=115  Identities=17%  Similarity=0.224  Sum_probs=63.7

Q ss_pred             EEEEEEcCCCc--hHHHHHHHHHhcCCCCC--CceeEEEEecCCCCCcCCCcchhhHHHHHHHh-hccc--cCCCceEEE
Q 044432           60 LIIKVLTFNRL--NSLSRCLHSLSAADYLT--DRVHLHVYVDHSAPLADQSSSESDSRAILRFL-DGFE--WKFGDKFVH  132 (584)
Q Consensus        60 I~IvVfaYNRP--~sLkRLL~SL~~AdY~g--d~v~L~IflD~pk~~s~~~~kVdevrellk~L-~gF~--WP~g~vtIi  132 (584)
                      +-|-+.+-.|+  ..|.+||+||-++--..  +.+.+.|++-.+.+     ..+.   .+.+-+ ..|.  +-.|.+.|+
T Consensus        54 L~IGIpTV~R~~~sYL~~TL~SLl~~ls~~Er~~i~IvVllAd~Dp-----~~~~---~~~~~i~~~f~~~i~sG~l~VI  125 (297)
T PF04666_consen   54 LCIGIPTVKREKESYLLDTLASLLDGLSPEERKDIVIVVLLADTDP-----DYHP---SVAQNISTRFADHIESGLLEVI  125 (297)
T ss_pred             EEEEecccccCCCchHHHHHHHHHHhCCHHHhcCeEEEEEecCCCh-----hhhH---HHHHHHHHHhHHHHHhCceEEE
Confidence            55555555555  47999999999865443  35677777755432     1222   111111 1111  122445555


Q ss_pred             eecCC-----------cchh---HHHhhh--c-------cCCCCCceEEEEcCCceeChhHHHHHHHHHHhhc
Q 044432          133 YRTAN-----------AGLQ---AQWLEA--W-------WPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYY  182 (584)
Q Consensus       133 ~R~~N-----------lGLa---~sIIEg--w-------yPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~  182 (584)
                      .....           .|-.   ..|-+-  +       |-.+.-.+.+.||||++.+|+|+.-++.++..-.
T Consensus       126 ~~p~~~Yp~l~~l~~~~~d~~~rv~wrsKq~lDya~Lm~y~~~~~~YyL~LEDDVia~~~f~~~i~~~v~~~~  198 (297)
T PF04666_consen  126 SPPPSYYPDLDNLKRNFGDSEERVRWRSKQNLDYAFLMNYCQNLGDYYLQLEDDVIAAPGFLSRIKRFVEAWE  198 (297)
T ss_pred             ecccccCCChhhhhhcccChhhhhhHHHhhcccHHHHHHHHHhcCCeEEEecCCeEechhHHHHHHHHHHHhc
Confidence            44433           1110   000000  0       0022346899999999999999999999997743

N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane

>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans

Probab=92.16  E-value=1.1  Score=45.65  Aligned_cols=108  Identities=16%  Similarity=0.241  Sum_probs=58.6

Q ss_pred             EEEEc-CCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcch
Q 044432           62 IKVLT-FNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGL  140 (584)
Q Consensus        62 IvVfa-YNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlGL  140 (584)
                      |++-+ |+|++.|.++|+.|++..+. .++ ++|-.+ +.+.      -+   .       ..|+...+.|+.+..   -
T Consensus         3 vvi~t~~~R~~~L~~~l~~l~~~~~l-~~I-vVvWn~-~~~~------P~---~-------~~~~~~~vpV~~~~~---~   60 (247)
T PF09258_consen    3 VVINTSYKRSDLLKRLLRHLASSPSL-RKI-VVVWNN-PNPP------PP---S-------SKWPSTGVPVRVVRS---S   60 (247)
T ss_dssp             EEEEE-SS-HHHHHHHHHHHTTSTTE-EEE-EEEEE--TS--------TH---H-------HHHT---S-EEEEEE---S
T ss_pred             EEEEecccchHHHHHHHHHHHcCCCC-CeE-EEEeCC-CCCC------Cc---c-------cccCCCCceEEEEec---C
Confidence            34444 99999999999999887653 233 333343 2211      00   0       235544343333322   1


Q ss_pred             hHHHhhhccCCC--CCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEee
Q 044432          141 QAQWLEAWWPTS--DHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQ  199 (584)
Q Consensus       141 a~sIIEgwyPts--~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISLY  199 (584)
                      .+++-.-|+|..  ..+.|+.++||+.+++.=+.|.-..-   +..+     .+|.|...-
T Consensus        61 ~nsLnnRF~p~~~i~T~AVl~~DDDv~~~~~~l~faF~~W---~~~p-----drlVGf~~R  113 (247)
T PF09258_consen   61 RNSLNNRFLPDPEIETDAVLSLDDDVMLSCDELEFAFQVW---REFP-----DRLVGFPPR  113 (247)
T ss_dssp             SHHGGGGGS--TT--SSEEEEEETTEEE-HHHHHHHHHHH---CCST-----TSEEES-EE
T ss_pred             CccHHhcCcCccccCcceEEEecCCcccCHHHHHHHHHHH---HhCh-----hheeCCccc
Confidence            233445566655  57799999999999998888776664   3333     678875543

They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.

>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ]

Probab=92.11  E-value=2.5  Score=42.83  Aligned_cols=99  Identities=19%  Similarity=0.142  Sum_probs=58.0

Q ss_pred             EEEEcCCCch------HHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeec
Q 044432           62 IKVLTFNRLN------SLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRT  135 (584)
Q Consensus        62 IvVfaYNRP~------sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~  135 (584)
                      |++.+++|.+      .++.+|.+|++... ...++++|--+++..      ..+  .++.+.++.+    +.+..+...
T Consensus         2 iIIPv~~~~~~~~i~~~l~~~l~~l~~~~~-~~~~eiIvvd~~s~~------~~~--~~l~~~~~~~----~~~~~i~~~   68 (281)
T PF10111_consen    2 IIIPVRNRSERPDILERLRNCLESLSQFQS-DPDFEIIVVDDGSSD------EFD--EELKKLCEKN----GFIRYIRHE   68 (281)
T ss_pred             EEEEecCCccchHHHHHHHHHHHHHHhcCC-CCCEEEEEEECCCch------hHH--HHHHHHHhcc----CceEEEEcC
Confidence            6777777774      35555888888532 345666554444321      111  3445555554    333233333


Q ss_pred             CC---cch--hHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHH
Q 044432          136 AN---AGL--QAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRG  176 (584)
Q Consensus       136 ~N---lGL--a~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~  176 (584)
                      .+   .|.  +.++.-.   ....+.+++++.|+.++|.|+..+..
T Consensus        69 ~~~~~f~~a~arN~g~~---~A~~d~l~flD~D~i~~~~~i~~~~~  111 (281)
T PF10111_consen   69 DNGEPFSRAKARNIGAK---YARGDYLIFLDADCIPSPDFIEKLLN  111 (281)
T ss_pred             CCCCCcCHHHHHHHHHH---HcCCCEEEEEcCCeeeCHHHHHHHHH
Confidence            22   243  3332222   23678999999999999999999888

>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]

Probab=91.20  E-value=1.4  Score=44.67  Aligned_cols=114  Identities=15%  Similarity=0.170  Sum_probs=77.8

Q ss_pred             eEEEEEEcCCCchHHHHHHHHHhcCCCC--CCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecC
Q 044432           59 TLIIKVLTFNRLNSLSRCLHSLSAADYL--TDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTA  136 (584)
Q Consensus        59 ~I~IvVfaYNRP~sLkRLL~SL~~AdY~--gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~  136 (584)
                      ...|++.+||--+++.=+++-+.+ ...  +...+++|-=|++.+.+     ++.    .+.++..- .--++.++.|..
T Consensus         4 kYsvilPtYnEk~Nlpi~~~li~~-~~~e~~~~~eiIivDD~SpDGt-----~~~----a~~L~k~y-g~d~i~l~pR~~   72 (238)
T KOG2978|consen    4 KYSVILPTYNEKENLPIITRLIAK-YMSEEGKKYEIIIVDDASPDGT-----QEV----AKALQKIY-GEDNILLKPRTK   72 (238)
T ss_pred             ceeEEeccccCCCCCeeeHHHHHh-hhhhhcCceEEEEEeCCCCCcc-----HHH----HHHHHHHh-CCCcEEEEeccC
Confidence            357899999987777733333332 222  34557777666664322     332    33333221 114788999999


Q ss_pred             CcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHhhccc
Q 044432          137 NAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYH  184 (584)
Q Consensus       137 NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd  184 (584)
                      .+||..+.+.|++-. .++++|+++-|+-=.|-|..=|-....++.|+
T Consensus        73 klGLgtAy~hgl~~a-~g~fiviMDaDlsHhPk~ipe~i~lq~~~~~d  119 (238)
T KOG2978|consen   73 KLGLGTAYIHGLKHA-TGDFIVIMDADLSHHPKFIPEFIRLQKEGNYD  119 (238)
T ss_pred             cccchHHHHhhhhhc-cCCeEEEEeCccCCCchhHHHHHHHhhccCcc
Confidence            999999999996432 57899999999999999998888887776655

>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=89.05  E-value=3.6  Score=39.10  Aligned_cols=45  Identities=29%  Similarity=0.573  Sum_probs=32.1

Q ss_pred             CCcchhHHHhhhc-cC-CCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          136 ANAGLQAQWLEAW-WP-TSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       136 ~NlGLa~sIIEgw-yP-ts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      .-.|+..+=+..| .. .++.++++|||||+.+++.|-+.+..++..
T Consensus        66 gEiGC~lSH~~~w~~~v~~~~~~~lIlEDDv~~~~~f~~~l~~~~~~  112 (200)
T PF01755_consen   66 GEIGCALSHIKAWQRIVDSGLEYALILEDDVIFDPDFKEFLEEILSH  112 (200)
T ss_pred             ceEeehhhHHHHHHHHHHcCCCeEEEEeccccccccHHHHHHHHHhh
Confidence            3456654444444 11 225799999999999999999999887754

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 25 GT25 from CAZY comprises enzymes with only one known activity; as a lipopolysaccharide biosynthesis protein. These enzymes catalyse the transfer of various sugars onto the growing lipopolysaccharide chain during its biosynthesis [].; GO: 0009103 lipopolysaccharide biosynthetic process

>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional

Probab=87.58  E-value=4  Score=47.95  Aligned_cols=109  Identities=16%  Similarity=0.127  Sum_probs=65.2

Q ss_pred             eeEEEEEEcCCCchHHHHHHHHHh-cCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecC
Q 044432           58 FTLIIKVLTFNRLNSLSRCLHSLS-AADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTA  136 (584)
Q Consensus        58 m~I~IvVfaYNRP~sLkRLL~SL~-~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~  136 (584)
                      -.+.|.+.+||-.+...++++++. +-+|+.  .++++-.|++.++     -.+.++   +..+.+  |.-.+.+..|..
T Consensus        63 ~~vsIlVPa~nE~~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~-----T~~~~~---~l~~~~--p~~~~v~~~~~g  130 (727)
T PRK11234         63 KPLAIMVPAWNETGVIGNMAELAATTLDYEN--YHIFVGTYPNDPA-----TQADVD---AVCARF--PNVHKVVCARPG  130 (727)
T ss_pred             CCEEEEEecCcchhhHHHHHHHHHHhCCCCC--eEEEEEecCCChh-----HHHHHH---HHHHHC--CCcEEEEeCCCC
Confidence            347899999999999999999885 568874  5666665533111     122222   222333  322333445544


Q ss_pred             CcchhHHHhhhc------cC--CCCCceEEEEcCCceeChhHHHHHHHHH
Q 044432          137 NAGLQAQWLEAW------WP--TSDHEFAFVVEDDLEVSPLFYKFLRGLI  178 (584)
Q Consensus       137 NlGLa~sIIEgw------yP--ts~~e~VIVLEDDLeVSP~Fy~Ymn~AL  178 (584)
                      |.|=+...-.++      ..  ...++.++|.+-|..++|++++.+++..
T Consensus       131 ~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~~~~~l~  180 (727)
T PRK11234        131 PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELRLFNYLV  180 (727)
T ss_pred             CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHHHHHhhc
Confidence            555433322221      11  1245668889999999999999665543

>KOG2977 consensus Glycosyltransferase [General function prediction only]

Probab=83.64  E-value=8.1  Score=41.38  Aligned_cols=140  Identities=19%  Similarity=0.148  Sum_probs=81.9

Q ss_pred             cccCCCCCCCCCccccccccccCCC-------CCC-CCCceeEEEEEEcCCCch----HHHHHHHHHhcCCCCCC---ce
Q 044432           26 YHSSLPTSKNLTRTETETFNLIPQN-------APS-HSSNFTLIIKVLTFNRLN----SLSRCLHSLSAADYLTD---RV   90 (584)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~m~I~IvVfaYNRP~----sLkRLL~SL~~AdY~gd---~v   90 (584)
                      ++++. ++|..-...+|.+-..+++       +-. ++.+|.+.|+|.+||-++    .+.-++.+|++ .|..+   +-
T Consensus        28 ~~~~~-~r~~~e~~e~ei~~~d~g~~k~~~lp~~~d~~~~~~lsVIVpaynE~~ri~~mldeav~~le~-ry~~~~~F~~  105 (323)
T KOG2977|consen   28 FESHL-PRPALENEETEITLDDPGSIKSRTLPNIRDSPEKMYLSVIVPAYNEEGRIGAMLDEAVDYLEK-RYLSDKSFTY  105 (323)
T ss_pred             hhccC-CCccccccceEEEEcCCCCccceeCcccccChhhceeEEEEecCCcccchHHHHHHHHHHHHH-HhccCCCCce
Confidence            55777 6666665555555443222       111 455778999999999765    45667788888 67664   33


Q ss_pred             eEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcchhHHHhhhccCCCCCceEEEEcCCc--eeCh
Q 044432           91 HLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDL--EVSP  168 (584)
Q Consensus        91 ~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlGLa~sIIEgwyPts~~e~VIVLEDDL--eVSP  168 (584)
                      .+.|..|++.++.     ++   -..++-..  -..-.+.|+.-.+|.|=..++-.|. -.+.-.++++..-|=  .++|
T Consensus       106 eiiVvddgs~d~T-----~~---~a~k~s~K--~~~d~irV~~l~~nrgKGgAvR~g~-l~~rG~~ilfadAdGaTkf~d  174 (323)
T KOG2977|consen  106 EIIVVDDGSTDST-----VE---VALKFSRK--LGDDNIRVIKLKKNRGKGGAVRKGM-LSSRGQKILFADADGATKFAD  174 (323)
T ss_pred             eEEEeCCCCchhH-----HH---HHHHHHHH--cCcceEEEeehhccCCCCcceehhh-HhccCceEEEEcCCCCccCCC
Confidence            8888888875321     22   11333321  2223678888899988655544431 112445666666553  2333


Q ss_pred             hHHHHHHHHHHh
Q 044432          169 LFYKFLRGLIVN  180 (584)
Q Consensus       169 ~Fy~Ymn~ALl~  180 (584)
                        +..+..+|..
T Consensus       175 --~ekLe~al~~  184 (323)
T KOG2977|consen  175 --LEKLEKALND  184 (323)
T ss_pred             --HHHHHHHHHh
Confidence              4456666643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	584
1fo8_A	343	Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Length = 343

 Score = 55.5 bits (133), Expect = 2e-08
 Identities = 37/185 (20%), Positives = 61/185 (32%), Gaps = 16/185 (8%)

Query: 62  IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVD-HSAPLADQSSSESDSRAILRFLD 120
           I V+  +R  ++ RCL  L       +   + V  D      A   +S   +   +R  D
Sbjct: 6   ILVIACDRS-TVRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPD 64

Query: 121 GFE---WKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGL 177
                      KF  Y       +   L   +   ++  A VVEDDLEV+P F+++ +  
Sbjct: 65  LSNIAVQPDHRKFQGYYKIARHYRWA-LGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQAT 123

Query: 178 IVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQP 237
                   PS    S +  + +            +       L+        G LL  + 
Sbjct: 124 Y-PLLKADPSLWCVSAWNDNGKEQ---------MVDSSKPELLYRTDFFPGLGWLLLAEL 173

Query: 238 WKEFR 242
           W E  
Sbjct: 174 WAELE 178

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 7e-05
 Identities = 50/305 (16%), Positives = 101/305 (33%), Gaps = 51/305 (16%)

Query: 298 QPLSNLKWYDFCFR------EVFPGRVV---KSMDDLGTVLPSVQRQETVLVVSLFGASD 348
           QP    + Y           +VF    V   +    L   L  ++  + VL+  + G+  
Sbjct: 104 QPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK 163

Query: 349 AVTRNLLCQFERINSQ--NHIF---LG---SHSDFLYDLARRGHPVIDADQFLNDIRAYE 400
                 +C   ++  +    IF   L    S    L  L +  + +       +D  +  
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223

Query: 401 SLSLQSSDARLTKEVLVKVYVIKKCL---EYRYSAWVVDANFLPFSND---LFLEPIDAT 454
            L + S  A L + +  K Y  + CL       +A   +A    F+     L        
Sbjct: 224 KLRIHSIQAELRRLLKSKPY--ENCLLVLLNVQNAKAWNA----FNLSCKILLTTRFKQV 277

Query: 455 SDFYYGESSKLLFV-KSSSSVQKMWTKNFLYEVANLVDKVSLPRDHRNFA----NIMANL 509
           +DF    ++  + +   S ++     K+ L +  +      LPR+         +I+A  
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD-CRPQDLPREVLTTNPRRLSIIAES 336

Query: 510 LRQKAGVMIKRVDESK-IGLDIGTGSANQSSSAVGKKIVYWSADLGPDRIQKQLEELSLW 568
           +R      +   D  K +  D       + ++ +   +      L P   +K  + LS++
Sbjct: 337 IRD----GLATWDNWKHVNCD-------KLTTIIESSL----NVLEPAEYRKMFDRLSVF 381

Query: 569 DIDSD 573
              + 
Sbjct: 382 PPSAH 386

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 2e-04
 Identities = 39/286 (13%), Positives = 89/286 (31%), Gaps = 84/286 (29%)

Query: 232 LLFPQPWKEFRLWYDD-HKARGIKPFLDGMRALSVSHRDAGV-NYGKSAGPDSKLLDESS 289
           LL  +P++   L   +   A+    F    + L ++ R   V ++  +A      LD  S
Sbjct: 237 LLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL-LTTRFKQVTDFLSAATTTHISLDHHS 295

Query: 290 LDFNILKMQPLSNLKWYDFCFREVFPGRVVKSMDDLGTVLPSVQRQETVLVVSLFGASDA 349
           +     +++ L  LK+ D                DL    P          +S+   S  
Sbjct: 296 MTLTPDEVKSLL-LKYLD------------CRPQDL----PREVLTTNPRRLSIIAES-- 336

Query: 350 VTRNLLCQFERINSQNHIFLGSHSDFLYDLARRGHPVIDADQFLN-----DIRA-YESLS 403
             R+ L  ++               + +    +   +I++   LN     + R  ++ LS
Sbjct: 337 -IRDGLATWDN--------------WKHVNCDKLTTIIES--SLNVLEPAEYRKMFDRLS 379

Query: 404 LQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDANFLPFSNDLFLEPIDATSDFYYGESS 463
           +    A +   +L  +             W          + +  + +   +  +     
Sbjct: 380 VFPPSAHIPTILLSLI-------------W---------FDVIKSDVMVVVNKLH----- 412

Query: 464 KLLFVKSSSSVQKMWTKNFLYEVANLVDKVSLPRD-----HRNFAN 504
                   S V+K   K     + ++  ++ +  +     HR+  +
Sbjct: 413 ------KYSLVEK-QPKESTISIPSIYLELKVKLENEYALHRSIVD 451

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	584
1fo8_A	343	Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl	99.9
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	98.27
3bcv_A	240	Putative glycosyltransferase protein; protein stru	98.14
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	97.93
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	97.69
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	97.61
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	97.47
4fix_A	657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	97.33
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	97.21
4hg6_A	802	Cellulose synthase subunit A; membrane translocati	97.17
3ckj_A	329	Putative uncharacterized protein; mycobacteria, un	97.13
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	96.58
3f1y_A	387	Mannosyl-3-phosphoglycerate synthase; GT-A type gl	96.58
2fy7_A	287	Beta-1,4-galactosyltransferase 1; M339H mutant, AP	93.15
2nxv_A	249	ATP synthase subunits region ORF 6; majastridin, A	89.89
1omz_A	293	Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; ro	88.92
2wvl_A	391	Mannosyl-3-phosphoglycerate synthase; GT-A fold, t	80.86

>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*

Probab=99.90  E-value=1.2e-23  Score=216.89  Aligned_cols=199  Identities=18%  Similarity=0.215  Sum_probs=130.8

Q ss_pred             eeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHh-hccccC-CCceEEE-ee
Q 044432           58 FTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFL-DGFEWK-FGDKFVH-YR  134 (584)
Q Consensus        58 m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L-~gF~WP-~g~vtIi-~R  134 (584)
                      +.+||++++||||+ |+|+|+||.++.+......++|.-|+.         .++++++++-. ..+.|- +.++..+ .|
T Consensus         2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs---------~~~~~~vi~~~~~~I~~~~~~d~~~~~~~   71 (343)
T 1fo8_A            2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCG---------HEETAQVIASYGSAVTHIRQPDLSNIAVQ   71 (343)
T ss_dssp             CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTT---------CHHHHHHHHTTGGGSEEEECSCCCCCCCC
T ss_pred             CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCC---------CHHHHHHHHHcCCceEEEEcCCccccccc
Confidence            45799999999998 999999999998766566788888885         34445544321 113332 3444433 38


Q ss_pred             cCCcchh------HHHhhhc-cCCC--CCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEeecCCCCC
Q 044432          135 TANAGLQ------AQWLEAW-WPTS--DHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVP  205 (584)
Q Consensus       135 ~~NlGLa------~sIIEgw-yPts--~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISLY~P~f~~  205 (584)
                      ++|+|++      .++..+. +..+  .++++|+||||+++||+||+||++++..|+.+      ++|++||+|+.....
T Consensus        72 ~~N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D------~~I~~ISa~n~~g~~  145 (343)
T 1fo8_A           72 PDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKAD------PSLWCVSAWNDNGKE  145 (343)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHC------TTEEEEESCCTTCBG
T ss_pred             hhhcCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcC------CcEEEEecccCcccc
Confidence            8999974      7777774 3333  68999999999999999999999999999988      499999999875321


Q ss_pred             CCCCCcccCCCCCCceeeecCCcchhhcCccchHHHH---------HHHHHhhhcCCCCcccccccceeccccccccccC
Q 044432          206 GKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEFR---------LWYDDHKARGIKPFLDGMRALSVSHRDAGVNYGK  276 (584)
Q Consensus       206 ~k~~~~i~~d~~~d~FL~Q~PsSWGwatw~d~WkeF~---------~w~~~~~~~g~~P~Le~mrSlstnh~~aGvh~~~  276 (584)
                      .    ..........|+.+...+|||++|++.|++|.         .|+.+....+-.-.+.=-.|++.|...-|+|-+.
T Consensus       146 ~----~~~~~~~~~lyrs~~f~~wGWa~wr~~W~e~~~~wp~~~Wd~w~r~~~~~~~r~ci~P~vsrv~n~G~~G~~~~~  221 (343)
T 1fo8_A          146 Q----MVDSSKPELLYRTDFFPGLGWLLLAELWAELEPKWPKAFWDDWMRRPEQRKGRACVRPEISRTMTFGRKGVSHGQ  221 (343)
T ss_dssp             G----GSCTTCTTCEEEESSCCCSSEEEEHHHHHHHGGGCCSSCHHHHHTSHHHHTTCEEEEESSBSEEECC--------
T ss_pred             c----cccccCcceEEeecCCCchhhhhcHHHHHHHhhhcchhHHHHHHHHHHHhCCCEEEEeccceeEeccccCcchhH
Confidence            1    11111233467777788999999999999885         3332211110000000004778887888877543

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=98.27  E-value=8e-06  Score=76.10  Aligned_cols=106  Identities=11%  Similarity=0.072  Sum_probs=81.5

Q ss_pred             eEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeec---
Q 044432           59 TLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRT---  135 (584)
Q Consensus        59 ~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~---  135 (584)
                      .+.|++.+|||++.+.++|+||.+..+.  ..+++|--|++.         +.+.+   .++.+.- ...+++++..   
T Consensus         2 ~vSViIp~yn~~~~l~~~l~Sl~~q~~~--~~eiivvDd~S~---------d~t~~---~~~~~~~-~~~i~~i~~~~~~   66 (255)
T 1qg8_A            2 KVSVIMTSYNKSDYVAKSISSILSQTFS--DFELFIMDDNSN---------EETLN---VIRPFLN-DNRVRFYQSDISG   66 (255)
T ss_dssp             CEEEEEEESSCTTTHHHHHHHHHTCSCC--CEEEEEEECSCC---------HHHHH---HHGGGGG-STTEEEEECCCCS
T ss_pred             eEEEEEEcCCCHHHHHHHHHHHHhccCC--ceEEEEEECCCC---------chHHH---HHHHHhh-cCCEEEEeccccc
Confidence            4789999999999999999999987764  678888888763         22233   4444421 3578888888   


Q ss_pred             -----CCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          136 -----ANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       136 -----~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                           .|.|.+.+.-.|+-- ...+++++|+||..+.|.++.-+..++..
T Consensus        67 ~~~~~~n~G~~~a~N~gi~~-a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~  115 (255)
T 1qg8_A           67 VKERTEKTRYAALINQAIEM-AEGEYITYATDDNIYMPDRLLKMVRELDT  115 (255)
T ss_dssp             HHHHHSSCHHHHHHHHHHHH-CCCSEEEEEETTEEECTTHHHHHHHHHHH
T ss_pred             ccccccccCHHHHHHHHHHH-cCCCEEEEeCCCCccChHHHHHHHHHHHh
Confidence                 899997766555321 25789999999999999999999888865

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}

Probab=98.14  E-value=1.6e-05  Score=73.27  Aligned_cols=105  Identities=17%  Similarity=0.178  Sum_probs=78.8

Q ss_pred             eEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHH-HHhhccccCCCceEEEeecCC
Q 044432           59 TLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAIL-RFLDGFEWKFGDKFVHYRTAN  137 (584)
Q Consensus        59 ~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrell-k~L~gF~WP~g~vtIi~R~~N  137 (584)
                      .+.|++.+|||++.+.+||+||.+..+.  ..+++|--|++.++         +.+++ ++...+    ..+++++ .+|
T Consensus         6 ~vsViIp~yn~~~~l~~~l~Sl~~q~~~--~~eiIvvDd~S~d~---------t~~~~~~~~~~~----~~i~~i~-~~n   69 (240)
T 3bcv_A            6 KVSVIVPIYNVEKYLDQCVQALLAQTLS--DIEIILIDDESPDN---------CPKICDDYAAQY----PNIKVIH-KKN   69 (240)
T ss_dssp             SEEEEEEESSCTTTHHHHHHHHHTCSSS--SEEEEEEECCCSSS---------HHHHHHHHHHHC----SSEEEEE-CCC
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHhCcCC--CeEEEEEECCCCcC---------HHHHHHHHHhhC----CCEEEEE-CCC
Confidence            4889999999999999999999987664  67888887876422         12222 233333    4677775 679


Q ss_pred             cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          138 AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       138 lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      .|.+.+.=.|+--. ..+++++|+||..+.|.++.-+..++..
T Consensus        70 ~G~~~a~N~g~~~a-~g~~i~~lD~Dd~~~~~~l~~l~~~~~~  111 (240)
T 3bcv_A           70 AGLGMACNSGLDVA-TGEYVAFCDSDDYVDSDMYMTMYNVAQK  111 (240)
T ss_dssp             CCHHHHHHHHHHHC-CSSEEEECCTTCCCCTTHHHHHHHHHHH
T ss_pred             CChHHHHHHHHHHc-CCCEEEEECCCCcCCHHHHHHHHHHHHh
Confidence            99977666663212 5689999999999999999999888866

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=97.93  E-value=5e-05  Score=78.62  Aligned_cols=113  Identities=14%  Similarity=0.051  Sum_probs=83.8

Q ss_pred             ceeEEEEEEcCCCc-hHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeec
Q 044432           57 NFTLIIKVLTFNRL-NSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRT  135 (584)
Q Consensus        57 ~m~I~IvVfaYNRP-~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~  135 (584)
                      .+.+.|++.+||++ +.|.|+|+||.+..|.....+++|--|++.+..    ..+   .+.++++.+  | ..+++++.+
T Consensus        28 ~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~----t~~---~l~~~~~~~--~-~~v~vi~~~   97 (472)
T 1xhb_A           28 LPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDF----LKR---PLESYVKKL--K-VPVHVIRME   97 (472)
T ss_dssp             CCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGG----GTH---HHHHHHHSS--S-SCEEEEECS
T ss_pred             CCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHH----HHH---HHHHHHHHC--C-CcEEEEECC
Confidence            34689999999999 999999999999877543357888777764211    111   123344444  1 278999999


Q ss_pred             CCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          136 ANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       136 ~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      +|.|++.+.-.|.--. ..+++++|++|+++.|.++.-+..++..
T Consensus        98 ~n~G~~~a~N~g~~~A-~gd~i~flD~D~~~~p~~L~~ll~~~~~  141 (472)
T 1xhb_A           98 QRSGLIRARLKGAAVS-RGQVITFLDAHCECTAGWLEPLLARIKH  141 (472)
T ss_dssp             SCCCHHHHHHHHHHHC-CSSEEEEEESSEEECTTCHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHhc-cCCeEEEECCCeEeCccHHHHHHHHHHh
Confidence            9999988777764212 4789999999999999999888888754

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=97.69  E-value=0.00011  Score=79.26  Aligned_cols=112  Identities=13%  Similarity=0.022  Sum_probs=83.5

Q ss_pred             ceeEEEEEEcCCCc-hHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeec
Q 044432           57 NFTLIIKVLTFNRL-NSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRT  135 (584)
Q Consensus        57 ~m~I~IvVfaYNRP-~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~  135 (584)
                      .+.+.|++.+||+. +.|.|+|+||.+..+.....+++|--|++.+..     +.  ..+.++++.+    ..+++++..
T Consensus       111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~t-----l~--~~l~~~~~~~----~~v~vi~~~  179 (570)
T 2d7i_A          111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREH-----LK--KPLEDYMALF----PSVRILRTK  179 (570)
T ss_dssp             CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGG-----GT--HHHHHHHTTS----TTEEEEECS
T ss_pred             CCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHH-----HH--HHHHHHHHhC----CeEEEEECC
Confidence            34589999999998 999999999998776533347788777764221     11  1223344444    479999999


Q ss_pred             CCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          136 ANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       136 ~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      +|.|++.+.-.|+--. ..+++++|.+|+++.|.++.-|..++..
T Consensus       180 ~n~G~~~A~N~G~~~A-~gd~i~fLD~D~~~~p~~L~~ll~~l~~  223 (570)
T 2d7i_A          180 KREGLIRTRMLGASVA-TGDVITFLDSHCEANVNWLPPLLDRIAR  223 (570)
T ss_dssp             SCCCHHHHHHHHHHHC-CSSEEEECCSSEEECTTCSHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhc-CCCEEEEEcCCccccccHHHHHHHHHHh
Confidence            9999988877774322 4689999999999999999988888754

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=97.61  E-value=0.00017  Score=75.69  Aligned_cols=108  Identities=11%  Similarity=-0.022  Sum_probs=82.1

Q ss_pred             ceeEEEEEEcCCCch-HHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeec
Q 044432           57 NFTLIIKVLTFNRLN-SLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRT  135 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~-sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~  135 (584)
                      .+.+.|++.+||+.+ .|.|+|+||.+..+.....+++|--|++.+++           +...+..+    ..+++++..
T Consensus        65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t-----------~~~~~~~~----~~v~vi~~~  129 (501)
T 2ffu_A           65 LPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPE-----------DGALLGKI----EKVRVLRND  129 (501)
T ss_dssp             CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTH-----------HHHGGGGB----TTEEEEECS
T ss_pred             CCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchH-----------HHHHHhcC----CCEEEEECC
Confidence            346899999999998 89999999998776533347777777764211           12233433    478999999


Q ss_pred             CCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          136 ANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       136 ~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      .|.|++.+.-.|.--. ..+++++|.+|+++.|.++.=|..++..
T Consensus       130 ~n~G~~~A~N~G~~~A-~gd~i~flD~D~~~~p~~L~~ll~~~~~  173 (501)
T 2ffu_A          130 RREGLMRSRVRGADAA-QAKVLTFLDSHCECNEHWLEPLLERVAE  173 (501)
T ss_dssp             SCCHHHHHHHHHHHHC-CSSEEEECCSSEEECTTCHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHHhc-CCCEEEEECCCcccCccHHHHHHHHHHh
Confidence            9999988877774222 4789999999999999999988888755

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=97.47  E-value=0.00082  Score=71.86  Aligned_cols=108  Identities=18%  Similarity=0.103  Sum_probs=76.5

Q ss_pred             eeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCC
Q 044432           58 FTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTAN  137 (584)
Q Consensus        58 m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~N  137 (584)
                      +.+.|++.+|||++.+.++|+||.+..+.. ..+++|--|++.++         +.+   .++.+.-. ..++++.+..+
T Consensus        93 p~vsviIp~~n~~~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~---------t~~---~~~~~~~~-~~i~~i~~~~~  158 (625)
T 2z86_A           93 DGLSIVIPTYNRAKILAITLACLCNQKTIY-DYEVIVADDGSKEN---------IEE---IVREFESL-LNIKYVRQKDY  158 (625)
T ss_dssp             CCEEEEEEESSCHHHHHHHHHHHHTCCCSS-CEEEEEEEESCSSC---------HHH---HHHTTTTT-SCEEEEEECCC
T ss_pred             CcEEEEEecCCcHHHHHHHHHHHHhhccCC-CeEEEEEeCCCchh---------HHH---HHHHhhhc-CCeEEEEeCCC
Confidence            468999999999999999999999876543 67888888886421         233   33444211 25666666543


Q ss_pred             -cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          138 -AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       138 -lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                       .|.+.+.-.|+--. ..+++++|++|.++.|.|+.-+..++..
T Consensus       159 ~~g~~~a~N~g~~~a-~g~~v~~lD~D~~~~~~~l~~~~~~~~~  201 (625)
T 2z86_A          159 GYQLCAVRNLGLRAA-KYNYVAILDCDMAPNPLWVQSYMELLAV  201 (625)
T ss_dssp             SCCHHHHHHHHHHHC-CSSEEEEECTTEEECTTHHHHHHHHHHH
T ss_pred             CcchhHHHHHHHHhC-CcCEEEEECCCCCCCHHHHHHHHHHHhc
Confidence             35655544443112 5789999999999999999999888765

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*

Probab=97.33  E-value=0.00042  Score=76.75  Aligned_cols=113  Identities=14%  Similarity=0.149  Sum_probs=76.8

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCce-eEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeec
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRV-HLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRT  135 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v-~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~  135 (584)
                      ...+.|++.+|||++.+.+||+||.+..+..+.. +++|-=|++.+.++    .+   .+.+.++..   ...++++...
T Consensus       179 ~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~----~~---~~~e~~~~~---~~~I~vI~~~  248 (657)
T 4fix_A          179 TANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRD----HP---DFPAAAARL---GSRLSIHDQP  248 (657)
T ss_dssp             CCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGG----ST---THHHHHHHH---GGGEEEEECC
T ss_pred             CCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccc----hH---HHHHHHHhc---CCCEEEEECC
Confidence            4568999999999999999999998865533334 56666666542111    11   122233322   1378888777


Q ss_pred             CCcchhHHHhhhcc-CCC--CCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          136 ANAGLQAQWLEAWW-PTS--DHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       136 ~NlGLa~sIIEgwy-Pts--~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                       |.|.+...-.|.. ...  +.+++++|.||.++.|.++.-|..++..
T Consensus       249 -N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~  295 (657)
T 4fix_A          249 -NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRF  295 (657)
T ss_dssp             -CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHH
T ss_pred             -CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHh
Confidence             9998665444421 111  4689999999999999999888888754

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=97.21  E-value=0.0015  Score=69.80  Aligned_cols=107  Identities=13%  Similarity=0.036  Sum_probs=79.1

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHH-HhhccccCCCceEEEeec
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILR-FLDGFEWKFGDKFVHYRT  135 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk-~L~gF~WP~g~vtIi~R~  135 (584)
                      .+.+.|++.+|||.+.+.++|+||.+..|.  ..+++|--|++.++         +.++++ +...+    ..++++. .
T Consensus       374 ~~~vsiii~~yn~~~~l~~~l~s~~~q~~~--~~eiivvdd~S~d~---------t~~~~~~~~~~~----~~i~~~~-~  437 (625)
T 2z86_A          374 VPLVSIYIPAYNCSKYIVRCVESALNQTIT--DLEVCICDDGSTDD---------TLRILQEHYANH----PRVRFIS-Q  437 (625)
T ss_dssp             SCSEEEEEEESSCTTTHHHHHHHHHSSSCC--SEEEEEEEESCSSS---------HHHHHHHHHTTC----TTEEEEE-E
T ss_pred             CCeEEEEEeCCCCHHHHHHHHHHHHhCcCC--CeEEEEEECcCChh---------HHHHHHHHHhhC----CcEEEEe-C
Confidence            345899999999999999999999987764  57888888887422         123322 22322    4677774 7


Q ss_pred             CCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          136 ANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       136 ~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      .|.|.+.+.-.|+--. ..+++++|++|.++.|.++.-+..++..
T Consensus       438 ~n~G~~~a~n~g~~~a-~g~~i~~ld~D~~~~~~~l~~~~~~~~~  481 (625)
T 2z86_A          438 KNKGIGSASNTAVRLC-RGFYIGQLDSDDFLEPDAVELCLDEFRK  481 (625)
T ss_dssp             CCCCHHHHHHHHHHHC-CSSEEEECCTTCEECTTHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhc-CCCEEEEECCCcccChhHHHHHHHHHHh
Confidence            8999987776664212 5689999999999999999888777654

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}

Probab=97.17  E-value=0.00083  Score=75.63  Aligned_cols=126  Identities=15%  Similarity=0.088  Sum_probs=85.5

Q ss_pred             eeEEEEEEcCCCchHH-HHHHHHHhcCCCCCCceeEEEEecCCCCCcC---CCcchhhH----HHHHHHhhccccCCCce
Q 044432           58 FTLIIKVLTFNRLNSL-SRCLHSLSAADYLTDRVHLHVYVDHSAPLAD---QSSSESDS----RAILRFLDGFEWKFGDK  129 (584)
Q Consensus        58 m~I~IvVfaYNRP~sL-kRLL~SL~~AdY~gd~v~L~IflD~pk~~s~---~~~kVdev----rellk~L~gF~WP~g~v  129 (584)
                      ..+.|++.+||++..+ .++|+||.+.+|..+..+++|--|++.+++.   +++.+++.    ..+.++.+..     .+
T Consensus       140 P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~-----~v  214 (802)
T 4hg6_A          140 PTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCREL-----GV  214 (802)
T ss_dssp             CCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH-----TC
T ss_pred             CcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhc-----Cc
Confidence            3589999999999776 9999999998998777889999998753220   11111111    1122222322     45


Q ss_pred             EEEeecCC-cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEe
Q 044432          130 FVHYRTAN-AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASL  198 (584)
Q Consensus       130 tIi~R~~N-lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISL  198 (584)
                      .++.|.+| .|.+.+.-.+.. ..+.++++++++|..+.|+++.-+...+.+   +      +++..|.+
T Consensus       215 ~~i~~~~~~~GKa~alN~gl~-~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~---d------p~v~~V~~  274 (802)
T 4hg6_A          215 VYSTRERNEHAKAGNMSAALE-RLKGELVVVFDADHVPSRDFLARTVGYFVE---D------PDLFLVQT  274 (802)
T ss_dssp             EEEECSSCCSHHHHHHHHHHH-HCCCSEEEECCTTEEECTTHHHHHHHHHHH---S------SSCCEEEC
T ss_pred             EEEEecCCCCcchHHHHHHHH-hcCCCEEEEECCCCCcChHHHHHHHHHHhc---C------CCeEEEec
Confidence            56666666 677665555532 126789999999999999999988888754   2      46666664

>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A

Probab=97.13  E-value=0.0014  Score=65.20  Aligned_cols=110  Identities=13%  Similarity=0.087  Sum_probs=76.1

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCC-CceEEE-ee
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKF-GDKFVH-YR  134 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~-g~vtIi-~R  134 (584)
                      .+.+.|++.+||+.+.+.++|+||.+..|. ...+++|--|++.++         +.+   .++.+.-.. ..++++ ..
T Consensus        47 ~~~vSViIp~yN~~~~l~~~l~sl~~q~~~-~~~eiivVDdgS~D~---------t~~---~~~~~~~~~~~~~~~~~~~  113 (329)
T 3ckj_A           47 GRTISVVLPALDEEDTIGSVIDSISPLVDG-LVDELIVLDSGSTDD---------TEI---RAVAAGARVVSREQALPEV  113 (329)
T ss_dssp             TCCEEEEEEESSCTTTHHHHHHHHGGGBTT-TBSEEEEEECSCCSS---------HHH---HHHHTTCEEEEHHHHCTTS
T ss_pred             CCcEEEEEeeCCCHHHHHHHHHHHHHhhCC-CCcEEEEEeCCCCch---------HHH---HHHHhhhhhccceeeeccC
Confidence            456899999999999999999999997654 245788877776422         222   333331000 011111 26


Q ss_pred             cCCcchhHHHhhhccCCCCCceEEEEcCCce-eChhHHHHHHHHHHh
Q 044432          135 TANAGLQAQWLEAWWPTSDHEFAFVVEDDLE-VSPLFYKFLRGLIVN  180 (584)
Q Consensus       135 ~~NlGLa~sIIEgwyPts~~e~VIVLEDDLe-VSP~Fy~Ymn~ALl~  180 (584)
                      ..|.|.+.+.-.|+--. ..+++++|++|.+ +.|.++.-+..++..
T Consensus       114 ~~n~G~~~a~n~g~~~a-~gd~i~~lD~D~~~~~p~~l~~l~~~l~~  159 (329)
T 3ckj_A          114 PIRPGKGEALWRSLAAS-RGDIVVFVDSDLINPHPMFVPWLVGPLLT  159 (329)
T ss_dssp             CCCCSHHHHHHHHHHHC-CCSEEEECCTTEESCCTTHHHHHHHHHHS
T ss_pred             CCCCCHHHHHHHHHHhC-CCCEEEEECCCCCCcChHHHHHHHHHHHh
Confidence            78999988776664222 4689999999999 999999888777643

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=96.58  E-value=0.00035  Score=77.01  Aligned_cols=106  Identities=15%  Similarity=0.174  Sum_probs=0.0

Q ss_pred             eEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHH-HHhhccccCCCceEEEeecCC
Q 044432           59 TLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAIL-RFLDGFEWKFGDKFVHYRTAN  137 (584)
Q Consensus        59 ~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrell-k~L~gF~WP~g~vtIi~R~~N  137 (584)
                      .+.|++.+|||++.+.+||+||.+..+.  ..+++|--|++.+++         .+++ ++.+.+  + ..+++++.++|
T Consensus         3 ~vSVIIp~yN~~~~L~~~L~Sll~Qt~~--~~EIIVVDDgStD~t---------~~il~~~~~~~--~-~~i~~i~~~~n   68 (729)
T 3l7i_A            3 KLTIIVTYYNAEEYITGCLESIKQQRTQ--DFNLIIVNDGSTDQS---------KKLMDEAIKDY--D-KNIRFIDLDEN   68 (729)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             eEEEEEEcCCCHHHHHHHHHHHHhCCCC--CeEEEEEECCCCCcH---------HHHHHHHHHhC--C-CCEEEEECCCC
Confidence            4789999999999999999999987764  667888888874322         1222 122222  1 36888888899


Q ss_pred             cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHH
Q 044432          138 AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIV  179 (584)
Q Consensus       138 lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl  179 (584)
                      .|++.+.=.|.- ....+++++|++|..+.|.++.-+..++.
T Consensus        69 ~G~~~arN~gi~-~A~gdyI~flD~Dd~~~p~~l~~l~~~l~  109 (729)
T 3l7i_A           69 SGHAHARNIALE-EVETPYFMFLDADDELASYAITFYLEKFN  109 (729)
T ss_dssp             ------------------------------------------
T ss_pred             CCHHHHHHHHHH-hccCCEEEEECCCCCCChhHHHHHHHHhc
Confidence            999777666632 11567999999999999999999888875

>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*

Probab=96.58  E-value=0.0028  Score=65.93  Aligned_cols=110  Identities=10%  Similarity=0.037  Sum_probs=77.8

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHHhcC--CCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccc--cCCCceEEE
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSLSAA--DYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFE--WKFGDKFVH  132 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL~~A--dY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~--WP~g~vtIi  132 (584)
                      .+.+.|++.+||+.+.+.+||+||.+.  .+. ...+++|--|++.+.         +.++   ++.+.  .....+.++
T Consensus        93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~-~~~EIIVVDDgStD~---------T~~i---~~~~~~~v~~~~~~~i  159 (387)
T 3f1y_A           93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAP-LIDQILVVDADSEDG---------TAGV---AASHGAEVYSENELMS  159 (387)
T ss_dssp             TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSC-CCSEEEEEECSCSSS---------HHHH---HHHTTCEEEEGGGTTG
T ss_pred             CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCC-CCeEEEEEcCcCCcc---------HHHH---HHHhCchhcccceeEe
Confidence            356899999999999999999999762  332 235788888887532         2333   33331  111122233


Q ss_pred             eecCCcchhHHHhhhccCCCCCceEEEEcCCce-eChhHHHHHHHHHHh
Q 044432          133 YRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLE-VSPLFYKFLRGLIVN  180 (584)
Q Consensus       133 ~R~~NlGLa~sIIEgwyPts~~e~VIVLEDDLe-VSP~Fy~Ymn~ALl~  180 (584)
                      ++..|.|.+.++-.|+--. ..+++++|+.|.. +.|.++.-|-.++..
T Consensus       160 ~~~~n~G~g~A~n~G~~~A-~gd~i~~lDaD~~~~~p~~L~~l~~~l~~  207 (387)
T 3f1y_A          160 GYGDAHGKGDAMWRALSVT-RGDLVLYIDADTRDFRPQLAYGVLGPVLE  207 (387)
T ss_dssp             GGCSCCSHHHHHHHHTTTC-CSSEEEECCTTCSSCCTHHHHTTHHHHHH
T ss_pred             cCCccCCHHHHHHHHHHhc-CCCEEEEEcCCCCcCCHHHHHHHHHHHHH
Confidence            4568999999999986322 5789999999999 899999998888855

>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...

Probab=93.15  E-value=0.089  Score=52.56  Aligned_cols=80  Identities=19%  Similarity=0.092  Sum_probs=54.6

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHHh---cCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEe
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSLS---AADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHY  133 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL~---~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~  133 (584)
                      ...+.|++.+|||+++|.++|+||.   +..+.  ..+++|-=|+.     +              .+|    +.    -
T Consensus        64 ~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~--~~EIiVVdds~-----d--------------~~f----~~----a  114 (287)
T 2fy7_A           64 PHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQL--DYGIYVINQAG-----D--------------TIF----NR----A  114 (287)
T ss_dssp             SCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC--EEEEEEEEECS-----S--------------SCC----CH----H
T ss_pred             CCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcC--CceEEEEEeCC-----C--------------Ccc----ch----h
Confidence            4679999999999999999999998   33443  44555544421     1              112    10    1


Q ss_pred             ecCCcchhHHHhhhccCCCCCceEEEEcCCceeChhH
Q 044432          134 RTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLF  170 (584)
Q Consensus       134 R~~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~F  170 (584)
                      +..|.|+..++-.+     ..++++++++|+++.|.+
T Consensus       115 ~a~N~G~~~al~~A-----~gd~i~flD~D~i~~~d~  146 (287)
T 2fy7_A          115 KLLNVGFQEALKDY-----DYTCFVFSDVDLIPMNDH  146 (287)
T ss_dssp             HHHHHHHHHHHHHS-----CCCEEEEECTTEEESBTT
T ss_pred             hhhhhHHHHHHHhC-----CCCEEEEECCCcccCCCc
Confidence            23466765443343     578999999999999996

>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*

Probab=89.89  E-value=1.5  Score=41.76  Aligned_cols=88  Identities=13%  Similarity=0.122  Sum_probs=55.7

Q ss_pred             ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecC
Q 044432           57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTA  136 (584)
Q Consensus        57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~  136 (584)
                      .|.+.|+ .+||+.+.|++||+||.++-......+++| +|....   +   .          .++          .+..
T Consensus        15 ~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~~EiIV-VDn~s~---d---~----------~g~----------a~a~   66 (249)
T 2nxv_A           15 TLMFSVC-SLVRDQAKYDRLLESFERFGFTPDKAEFLA-ADNREG---N---Q----------FHG----------FSWH   66 (249)
T ss_dssp             CCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTTEEEEE-EECTTS---C---S----------CCT----------TTHH
T ss_pred             cceEEEE-EeeCCHHHHHHHHHHHHHhccCCCcEEEEE-EECCCC---C---c----------ccH----------HHHH
Confidence            4556664 469999999999999876432221244444 565321   0   0          011          2333


Q ss_pred             CcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHhh
Q 044432          137 NAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNY  181 (584)
Q Consensus       137 NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y  181 (584)
                      |.|++.+         ..+++++|.+|+++.|.++.=|..++.+.
T Consensus        67 N~Gi~~A---------~g~yl~fln~D~~~~~~~l~~l~~~~~~~  102 (249)
T 2nxv_A           67 KQMLPRC---------KGRYVIFCHEDVELVDRGYDDLVAAIEAL  102 (249)
T ss_dssp             HHHGGGC---------CSSEEEEEETTEECSSCCHHHHHHHHHHH
T ss_pred             HHHHHhc---------CCCEEEEECCCcccCccHHHHHHHHHHhc
Confidence            4554422         46899999999999999998888777653

>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*

Probab=88.92  E-value=6.4  Score=40.24  Aligned_cols=111  Identities=17%  Similarity=0.139  Sum_probs=65.2

Q ss_pred             EEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccC-CCceEEEeecCCc
Q 044432           60 LIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWK-FGDKFVHYRTANA  138 (584)
Q Consensus        60 I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP-~g~vtIi~R~~Nl  138 (584)
                      +-|++-+|+|++.|.|+++.+++..+. +  .+.|-=-.+++..     -+   ....   .+ -| ...++|+....| 
T Consensus        30 FTvvi~ty~R~~~L~~lv~~~~~~~~v-~--~IvVvWn~~~~~p-----p~---~~~~---~~-~~~~vpv~v~~~~~n-   93 (293)
T 1omz_A           30 FTLIMQTYNRTDLLLRLLNHYQAVPSL-H--KVIVVWNNVGEKG-----PE---ELWN---SL-GPHPIPVIFKPQTAN-   93 (293)
T ss_dssp             EEEEEEESSCHHHHHHHHHHHTTSTTE-E--EEEEEECCTTCCC-----TH---HHHH---HT-CCCSSCEEEEECSSC-
T ss_pred             eEEEEEeecccHHHHHHHHHHhcCCCC-C--eEEEEeCCCCCCC-----Ch---hhcc---cc-CCCCccEEEEeCCCC-
Confidence            455568899999999999999887643 2  3333333322111     01   1111   11 01 124555443333 


Q ss_pred             chhHHHhhhccCCC--CCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEe
Q 044432          139 GLQAQWLEAWWPTS--DHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASL  198 (584)
Q Consensus       139 GLa~sIIEgwyPts--~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISL  198 (584)
                      .|.    .-|+|..  ..+.|+.|+||+.++..=+.|.-..=   +..+     .+|.|...
T Consensus        94 sLn----nRF~p~~~i~T~AVLslDDDv~l~~~el~faF~vW---r~~P-----dRlVGf~~  143 (293)
T 1omz_A           94 KMR----NRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIW---QQFP-----DQIIGFVP  143 (293)
T ss_dssp             CGG----GGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHH---TTST-----TSEEESCE
T ss_pred             chh----hccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHH---HHCc-----cceecCch
Confidence            454    4466655  57789999999999999877665553   3333     57777643

>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*

Probab=80.86  E-value=7.6  Score=41.32  Aligned_cols=106  Identities=13%  Similarity=0.107  Sum_probs=72.8

Q ss_pred             CceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccc-cCCCceEEEee
Q 044432           56 SNFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFE-WKFGDKFVHYR  134 (584)
Q Consensus        56 ~~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~-WP~g~vtIi~R  134 (584)
                      +.+.+.|+|.+||=-   .+||+++.+.-+.  ...+++-.|++.         |......+.++.|. +...++.+++ 
T Consensus        51 i~~klSIVVPvYNEe---~~lLesVl~qi~~--d~eIIlVdDGS~---------D~s~~e~dil~~~~~~~~~ri~viH-  115 (391)
T 2wvl_A           51 VLEQTAIVVPTRNER---LKLLEGVLSGIPH--EALILVASNSSP---------DRFQMERDLLEEFAHLTERPALIFH-  115 (391)
T ss_dssp             HHTTEEEEEEESSCC---HHHHHHHHHTSCT--TSEEEEEECCCH---------HHHHHHHHHHHHHHHHTTCCEEEEE-
T ss_pred             HHhceEEEEeccCcH---HHHHHHHHhcCCC--CceEEEEECCCC---------CChHhHHHHHHHHHhhcccceEEEe-
Confidence            345589999999944   3689999998654  677888888873         33322233444442 1235677774 


Q ss_pred             cCCcchhHHHhhhccC--C-----------------------CCCceEEEEcCCceeChhHHHHHHH
Q 044432          135 TANAGLQAQWLEAWWP--T-----------------------SDHEFAFVVEDDLEVSPLFYKFLRG  176 (584)
Q Consensus       135 ~~NlGLa~sIIEgwyP--t-----------------------s~~e~VIVLEDDLeVSP~Fy~Ymn~  176 (584)
                      .+|.||+.+.-+..+|  .                       ...++|-.++-|--+....+.|++.
T Consensus       116 Qkn~gls~Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk~  182 (391)
T 2wvl_A          116 QKDPALAEALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYVRA  182 (391)
T ss_dssp             TTCHHHHHHHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHHH
T ss_pred             ccChHHHHHHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHHHH
Confidence            8899998887655443  1                       0257999999999998777777754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	584
d1fo8a_	343	c.68.1.10 (A:) N-acetylglucosaminyltransferase I {	5e-05
d1omza_	265	c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransf	0.004

>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 343

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: N-acetylglucosaminyltransferase I
domain: N-acetylglucosaminyltransferase I
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 43.3 bits (102), Expect = 5e-05
 Identities = 38/184 (20%), Positives = 60/184 (32%), Gaps = 16/184 (8%)

Query: 62  IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVD-HSAPLADQSSSESDSRAILRFLD 120
           I V+  +R   + RCL  L       +   + V  D      A   +S   +   +R  D
Sbjct: 6   ILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPD 64

Query: 121 GFEWK---FGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGL 177
                      KF  Y       +   L   +   ++  A VVEDDLEV+P F+++ +  
Sbjct: 65  LSNIAVQPDHRKFQGYYKIARHYRWA-LGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQAT 123

Query: 178 IVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQP 237
                         S++  S        GK    +       L+        G LL  + 
Sbjct: 124 YPLL------KADPSLWCVSAWND---NGKEQ-MVDSSKPELLYRTDFFPGLGWLLLAEL 173

Query: 238 WKEF 241
           W E 
Sbjct: 174 WAEL 177

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Length = 265

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.9 bits (84), Expect = 0.004
 Identities = 30/198 (15%), Positives = 57/198 (28%), Gaps = 30/198 (15%)

Query: 58  FTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILR 117
           FTLI+   T+NR + L R L+   A   L   +           +   +  E     +  
Sbjct: 5   FTLIM--QTYNRTDLLLRLLNHYQAVPSLHKVI-----------VVWNNVGEKGPEELWN 51

Query: 118 FLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGL 177
            L           V ++   A      L+  +P  +     +V+DD  +S     F    
Sbjct: 52  SLGPHPIP-----VIFKPQTANKMRNRLQV-FPEVETNAVLMVDDDTLISAQDLVFA--- 102

Query: 178 IVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQL----- 232
             + +   P  +   +    +     +    G ++          Y +V           
Sbjct: 103 -FSIWQQFPDQIIGFVPRKHVSTSSGIYSYGGFELQTPGPGNGDQYSMVLIGASFFNSKY 161

Query: 233 --LFPQPWKEFRLWYDDH 248
             LF +         D+ 
Sbjct: 162 LELFQKQPAAVHALIDET 179

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	584
d1fo8a_	343	N-acetylglucosaminyltransferase I {Rabbit (Oryctol	99.89
d1omza_	265	Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga	98.27
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	97.9
d1qg8a_	255	Spore coat polysaccharide biosynthesis protein Sps	97.64

>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: N-acetylglucosaminyltransferase I
domain: N-acetylglucosaminyltransferase I
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.89  E-value=3.3e-24  Score=219.27  Aligned_cols=167  Identities=17%  Similarity=0.142  Sum_probs=117.3

Q ss_pred             EEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHh---hccccCCCceE--EEee
Q 044432           60 LIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFL---DGFEWKFGDKF--VHYR  134 (584)
Q Consensus        60 I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L---~gF~WP~g~vt--Ii~R  134 (584)
                      |||+||+|||| +|+|+|+||.++...+...+|+|++||++.+.     .++++.+.+.+   +.-+|....++  ...+
T Consensus         4 iPVlv~a~NRP-~l~r~LesLlk~~p~~~~~~I~Vs~DG~~~~~-----~~~v~~~~~~v~~I~~~~~~~~~~~~~~~k~   77 (343)
T d1fo8a_           4 IPILVIACDRS-TVRRCLDKLLHYRPSAELFPIIVSQDCGHEET-----AQVIASYGSAVTHIRQPDLSNIAVQPDHRKF   77 (343)
T ss_dssp             CCEEEEESSCT-THHHHHHHHHHHCSCTTTSCEEEEECTTCHHH-----HHHHHTTGGGSEEEECSCCCCCCCCTTCGGG
T ss_pred             ccEEEEEcCHH-HHHHHHHHHHhcCccccCccEEEEecCCchhH-----HHHHHHHHHHHHHhcCCccccceecchhhcc
Confidence            79999999999 79999999999888778889999999986321     11111111112   22222111111  1123


Q ss_pred             cCCcchhHHHhhhc-cCCC--CCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEeecCCCCCCCCCCc
Q 044432          135 TANAGLQAQWLEAW-WPTS--DHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNK  211 (584)
Q Consensus       135 ~~NlGLa~sIIEgw-yPts--~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISLY~P~f~~~k~~~~  211 (584)
                      ..|.|+++++..+. |..+  .+++|||||||+++||+||.||+++|..|+.|+      +|++||+++..-.+.    .
T Consensus        78 ~~n~giarhy~~AL~~~F~~~~~~~~IiLEDDl~~spdFf~y~~~~l~~~~~D~------~i~~IS~wNdnG~~~----~  147 (343)
T d1fo8a_          78 QGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADP------SLWCVSAWNDNGKEQ----M  147 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCT------TEEEEESCCTTCBGG----G
T ss_pred             cchhHHHHHHHHHHHHHhcccCCceEEEEecCceeeHHHHHHHHHHHHHHhcCC------CEEEEeccccCCCcc----c
Confidence            44789999999885 3333  478999999999999999999999999999994      999999998531110    0


Q ss_pred             ccCCCCCCceeeecCCcchhhcCccchHHHH
Q 044432          212 IHLDNGTQLFLYQLVGTWGQLLFPQPWKEFR  242 (584)
Q Consensus       212 i~~d~~~d~FL~Q~PsSWGwatw~d~WkeF~  242 (584)
                      ....++...|+.....+|||++|++.|+|+.
T Consensus       148 ~~~~~~~~lyrs~~fpg~GW~~~r~~W~el~  178 (343)
T d1fo8a_         148 VDSSKPELLYRTDFFPGLGWLLLAELWAELE  178 (343)
T ss_dssp             SCTTCTTCEEEESSCCCSSEEEEHHHHHHHG
T ss_pred             ccCCCCceEEeecCCCchhhheeHHHHHHhh
Confidence            1111122346666666899999999999754

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.27  E-value=3.3e-06  Score=72.58  Aligned_cols=105  Identities=17%  Similarity=0.188  Sum_probs=71.3

Q ss_pred             EEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCCcc
Q 044432           60 LIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTANAG  139 (584)
Q Consensus        60 I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~NlG  139 (584)
                      +-|++.+|||++.|.|||+||.+-.|..   .++|-.|...+..     .   ..+.+....     ....++...+|.|
T Consensus         5 ~tvii~tyn~~~~l~~~l~sl~~q~~~~---~~iiV~d~~sd~~-----~---~~i~~~~~~-----~~~~~~~~~~~~g   68 (265)
T d1omza_           5 FTLIMQTYNRTDLLLRLLNHYQAVPSLH---KVIVVWNNVGEKG-----P---EELWNSLGP-----HPIPVIFKPQTAN   68 (265)
T ss_dssp             EEEEEEESSCHHHHHHHHHHHTTSTTEE---EEEEEECCTTCCC-----T---HHHHHHTCC-----CSSCEEEEECSSC
T ss_pred             EEEEEEcCCCHHHHHHHHHHHHcCCCcC---eEEEEECCCCCcc-----H---HHHHHHhcc-----cceEEEEecCCCC
Confidence            5788899999999999999999876652   3445555443211     2   222332222     2344556678888


Q ss_pred             hhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHhh
Q 044432          140 LQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNY  181 (584)
Q Consensus       140 La~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y  181 (584)
                      .+.+.-.|+- ....+.+++|+||..+.|.++.-+...+...
T Consensus        69 ~~~a~n~~~~-~a~ge~i~~lD~D~~~~~~~l~~l~~~~~~~  109 (265)
T d1omza_          69 KMRNRLQVFP-EVETNAVLMVDDDTLISAQDLVFAFSIWQQF  109 (265)
T ss_dssp             CGGGGGSCCT-TCCSSEEEEECTTEEECHHHHHHHHHHHTTS
T ss_pred             chhhhhhhHH-hCCcCEEEEeCcccCCCHHHHHHHHHHHHhC
Confidence            8776665531 1257899999999999999998887776543

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.90  E-value=3.2e-05  Score=73.25  Aligned_cols=111  Identities=15%  Similarity=0.070  Sum_probs=77.9

Q ss_pred             eEEEEEEcCCCch-HHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCC
Q 044432           59 TLIIKVLTFNRLN-SLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTAN  137 (584)
Q Consensus        59 ~I~IvVfaYNRP~-sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~N  137 (584)
                      .+.|++.+||+.. .|.|||+|+.+..|.....+|+|-=|++.+++     +.  ..+.++++.+.   ..+++++.++|
T Consensus        23 ~vSIIIp~yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~-----~~--~~l~~~~~~~~---~~i~vi~~~~n   92 (328)
T d1xhba2          23 TTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDF-----LK--RPLESYVKKLK---VPVHVIRMEQR   92 (328)
T ss_dssp             CEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGG-----GT--HHHHHHHHSSS---SCEEEEECSSC
T ss_pred             CEEEEEeccCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhh-----HH--HHHHHHHHhcC---CCeEEEEeccc
Confidence            4789999999864 58999999988766533336666666654221     22  22334555552   46889999999


Q ss_pred             cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432          138 AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN  180 (584)
Q Consensus       138 lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~  180 (584)
                      .|.+.+.=.|.- ....+++++|.+|.++.|.++.=|..++..
T Consensus        93 ~G~~~a~N~Gi~-~a~gd~i~flD~D~~~~p~~l~~l~~~~~~  134 (328)
T d1xhba2          93 SGLIRARLKGAA-VSRGQVITFLDAHCECTAGWLEPLLARIKH  134 (328)
T ss_dssp             CCHHHHHHHHHH-HCCSSEEEEEESSEEECTTCHHHHHHHHHH
T ss_pred             ccchHHHHHHHH-hhhcceeeecCcccccChhHHHHHHHHHhc
Confidence            999776555532 125789999999999999999887777644

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=97.64  E-value=0.00025  Score=64.06  Aligned_cols=107  Identities=13%  Similarity=0.093  Sum_probs=77.0

Q ss_pred             eEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEee----
Q 044432           59 TLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYR----  134 (584)
Q Consensus        59 ~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R----  134 (584)
                      .|.|++.+||++.-++|+|+|+.+..|.  ..+++|.-|++.         |   ++.+.++.|... ..+++++.    
T Consensus         2 ~vSiiip~yN~~~~l~~~l~Si~~Qt~~--~~eiivvdd~S~---------d---~t~~~l~~~~~~-~~i~~~~~~~~~   66 (255)
T d1qg8a_           2 KVSVIMTSYNKSDYVAKSISSILSQTFS--DFELFIMDDNSN---------E---ETLNVIRPFLND-NRVRFYQSDISG   66 (255)
T ss_dssp             CEEEEEEESSCTTTHHHHHHHHHTCSCC--CEEEEEEECSCC---------H---HHHHHHGGGGGS-TTEEEEECCCCS
T ss_pred             EEEEEEecCCCHHHHHHHHHHHHhCCCC--CeEEEEEECCCC---------c---cHHHHHHHhhhh-cccccccccccc
Confidence            3688999999999999999999988775  578888888764         2   334556666432 34555543    


Q ss_pred             ----cCCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHhh
Q 044432          135 ----TANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNY  181 (584)
Q Consensus       135 ----~~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y  181 (584)
                          ..|.|++.+.=.|.--+ ..+++++|++|-...|.++.-+...+.++
T Consensus        67 ~~~~~~~~g~~~a~N~gi~~a-~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~  116 (255)
T d1qg8a_          67 VKERTEKTRYAALINQAIEMA-EGEYITYATDDNIYMPDRLLKMVRELDTH  116 (255)
T ss_dssp             HHHHHSSCHHHHHHHHHHHHC-CCSEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred             cccccccchhccccccccccc-ccccccccccccccccchHHHHHHHHHhC
Confidence                36888865544442112 56899999999999999988877776553