Citrus Sinensis ID: 044545

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-
Protein Sequence
MVCGKRSSKCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIIDSVCESKVEL
Secondary Structure (PSIPRED)
cccccccccccEEEHHHHHHHHHHHHHHHHHHHEEEEEccccEEEEEEEEEEEEEEcccccEEEEEEEEEEEEEEcccEEEEEEEcEEEEEEEccEEEEEccccccEEccccEEEEEEEEEEEEEEEcccccHHHHHcccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEccccEEEccEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEcEEcccccccEEEEEEEEEEEEEcccccEEEEcccEEEEEEccEEEEEEEccccccccccEEEEEEEEEEEccHcccccHHHHHHHcccEEEEEEEEEcEEEEEEEEEEEEEEEEEEEEEEEEEcccEEEcccccEEcc
Coil and Loop (DISEMBL)
mvcgkrsskclkcccgiTSILLIIVLIVLIILFFTlfkpkepkitakpvdlekinllffptiqLNVTLGVVVTvdnrnyggfkyqngtayVSYHGVVvaeapvedgripargkqnissSLTIFADKLISNSNFLGDILSGVmnfsstttlHGEVIVLKYFKqkatsssscdiSIVLQSQIIDSVCESKVEL
Flexible Loop (DISEMBL)
mvcgkrsskclkCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIIDSVCESKVEL
Low Complexity Region (SEG)
MVCGKRSSKCLKCCCGITSilliivlivliilFFTLFKPKEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIIDSVCESKVEL
Disordered region (IsUnstruct)
********KCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIIDSVC******
Disordered Region (DISOPRED)
************CCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIIDSVC*S*VEL
Disordered Region (DISEMBL)
********KCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIIDSVCESKVEL
Disordered Region (DISPRO)
******SSKCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIIDSVCESKVEL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVCGKRSSKCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIIDSVCESKVEL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	191
224113889	192	predicted protein [Populus trichocarpa]	1.0	0.994	0.583	3e-57
255554967	191	conserved hypothetical protein [Ricinus	0.994	0.994	0.510	2e-48
224069022	187	predicted protein [Populus trichocarpa]	0.958	0.978	0.508	2e-46
356542090	186	PREDICTED: uncharacterized protein LOC10	0.968	0.994	0.448	1e-43
356550014	186	PREDICTED: uncharacterized protein LOC10	0.968	0.994	0.464	3e-43
255577737	189	conserved hypothetical protein [Ricinus	0.952	0.962	0.454	6e-40
356547077	186	PREDICTED: uncharacterized protein LOC10	0.968	0.994	0.427	9e-39
356550012	186	PREDICTED: uncharacterized protein LOC10	0.968	0.994	0.427	1e-38
357480805	190	hypothetical protein MTR_5g005950 [Medic	0.994	1.0	0.455	4e-36
357453465	189	hypothetical protein MTR_2g088610 [Medic	0.947	0.957	0.411	6e-34

>gi|224113889|ref|XP_002316605.1| predicted protein [Populus trichocarpa] gi|222859670|gb|EEE97217.1| predicted protein [Populus trichocarpa]

 Score =  226 bits (576), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 112/192 (58%), Positives = 145/192 (75%), Gaps = 1/192 (0%)

Query: 1   MVCGKRSSKCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFP 60
           M   KR    LK C  +T +LL+I+ +VL+ L+FT+FKPKEPKI  +PV LE I  + FP
Sbjct: 1   MGSSKRFCCGLKICVLVTFVLLVIISVVLVTLYFTVFKPKEPKINPQPVILESIRWIIFP 60

Query: 61  TIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSL 120
              LN+TLG+V+TV+NRNYG FKYQ  TAYVSY G VVAEAP+E   IPARGK NIS+++
Sbjct: 61  IQMLNITLGMVITVENRNYGSFKYQESTAYVSYRGNVVAEAPIEADTIPARGKHNISTTV 120

Query: 121 TIFADKLISNSNFLGDILSG-VMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQ 179
           T+FADKL+S+ NF  ++L G ++NF+S TTLHG+VI+ K  K KATSSS+CDISI +Q Q
Sbjct: 121 TMFADKLLSDDNFKRELLQGSILNFTSATTLHGKVILFKLIKAKATSSSTCDISIFVQEQ 180

Query: 180 IIDSVCESKVEL 191
             +S+C+SKV L
Sbjct: 181 QTESICKSKVGL 192

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554967|ref|XP_002518521.1| conserved hypothetical protein [Ricinus communis] gi|223542366|gb|EEF43908.1| conserved hypothetical protein [Ricinus communis]

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 98/192 (51%), Positives = 134/192 (69%), Gaps = 2/192 (1%)

Query: 1   MVCGKRSSKCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFP 60
           M   +RS + LK CCGIT+IL +I+ +VL+IL+FT+FKPKEP +  + V LE I + + P
Sbjct: 1   MEGKRRSYRGLKICCGITAILTVIIAVVLVILYFTVFKPKEPNVITRSVALENIKVAW-P 59

Query: 61  TIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSL 120
            + LN+TLGV V +DN+NYGGFKY N TAYVSY G V+ EAPV    +PAR K + S+S+
Sbjct: 60  QLFLNITLGVGVIIDNKNYGGFKYSNSTAYVSYRGNVIGEAPVPADTVPARKKHDTSTSV 119

Query: 121 TIFADKLISNSNFLGDIL-SGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQ 179
           TIFA+KL  + NFL D L  G++NF++ +TLHG+   L  FK +AT  ++CDIS+ +  Q
Sbjct: 120 TIFANKLFEDDNFLHDFLIVGILNFTAASTLHGKASFLDLFKVEATIFTTCDISLFVVPQ 179

Query: 180 IIDSVCESKVEL 191
              S C+SKV  
Sbjct: 180 HAQSFCKSKVSF 191

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069022|ref|XP_002302881.1| predicted protein [Populus trichocarpa] gi|222844607|gb|EEE82154.1| predicted protein [Populus trichocarpa]

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 93/183 (50%), Positives = 126/183 (68%)

Query: 9   KCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFPTIQLNVTL 68
           +  K CCG+T+I +II+  V   L  T+FKPK P I A PV LE I     P + LNVTL
Sbjct: 5   RGFKICCGVTTIFIIILAAVFTTLALTVFKPKNPSIIANPVGLENIQFGGSPNVTLNVTL 64

Query: 69  GVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADKLI 128
           G+VVT+DN NYG FK+ N TAYV YHGV+VAE P++   IPA  K NI++S+ + AD LI
Sbjct: 65  GMVVTIDNPNYGSFKFTNSTAYVDYHGVIVAEVPIQADLIPAHSKVNITTSVDLMADALI 124

Query: 129 SNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIIDSVCESK 188
            N  FL D+++G  NF ST++LHG+V V+K  K  AT+ S+CDI++ + S  IDS C+S+
Sbjct: 125 KNPYFLQDLIAGRFNFVSTSSLHGKVEVIKILKLHATALSTCDITLFVTSLSIDSSCKSE 184

Query: 189 VEL 191
           ++L
Sbjct: 185 IKL 187

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542090|ref|XP_003539504.1| PREDICTED: uncharacterized protein LOC100800442 [Glycine max]

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 83/185 (44%), Positives = 126/185 (68%)

Query: 7   SSKCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFPTIQLNV 66
           +++ LK C  ++ + L+IV I+++ LF T+FKPK P+IT  PV LE       P + +NV
Sbjct: 2   ANRGLKICLAVSLLFLVIVTIMIVTLFMTIFKPKNPEITVHPVGLEDFQFSLSPNLTINV 61

Query: 67  TLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADK 126
           TLG+++T+ N NYG F+Y+N T YV++H  VVAE P+E   +PARG+ N+++S     +K
Sbjct: 62  TLGMIITIRNPNYGSFEYKNSTGYVNFHDTVVAEVPIEAELVPARGQINVNTSADFMVEK 121

Query: 127 LISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIIDSVCE 186
           LI++ NFL D+L G +NF+STT L G+  +    K KATS SSCDIS+ + S+ +D+ C 
Sbjct: 122 LINDPNFLSDVLGGTLNFTSTTALPGKARMFNIIKLKATSYSSCDISVNISSRKVDTNCN 181

Query: 187 SKVEL 191
            K++L
Sbjct: 182 YKIKL 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550014|ref|XP_003543385.1| PREDICTED: uncharacterized protein LOC100808471 [Glycine max]

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 86/185 (46%), Positives = 125/185 (67%)

Query: 7   SSKCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFPTIQLNV 66
           +S+ LK C  ++ +LLII  I ++ LF T+FKPK P+IT  PV LE     F P + LNV
Sbjct: 2   ASRGLKICLAVSLLLLIIFTIAIVTLFMTIFKPKNPEITVHPVGLEDFQSSFSPNLTLNV 61

Query: 67  TLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADK 126
           TLG+++T+ N NYG F+Y N T+YV +H  VVAE P+E   +PAR + N+++S      K
Sbjct: 62  TLGMIITIRNPNYGSFQYINSTSYVKFHDTVVAEVPIEAELVPARSQINVNTSADFMVAK 121

Query: 127 LISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIIDSVCE 186
           LI++ NFL D+L G +NF+ST  L G+  +L   K KATS S+CDIS+ + S+ +D+ C+
Sbjct: 122 LINDPNFLSDVLGGTLNFTSTIALPGKARMLNIIKLKATSYSTCDISVNISSRNVDTNCK 181

Query: 187 SKVEL 191
           SK++L
Sbjct: 182 SKIKL 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577737|ref|XP_002529744.1| conserved hypothetical protein [Ricinus communis] gi|223530785|gb|EEF32651.1| conserved hypothetical protein [Ricinus communis]

 Score =  169 bits (427), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 84/185 (45%), Positives = 122/185 (65%), Gaps = 3/185 (1%)

Query: 7   SSKCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFPTIQLNV 66
           S + LK  CG+T+I LIIV +V + L FT+FKPK+P++   P  LE + L     I  NV
Sbjct: 8   SRRGLKIFCGVTAIFLIIVAVVFVSLAFTIFKPKDPQVFLHPSGLENLQL---ANITSNV 64

Query: 67  TLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADK 126
           T+ +V+T+ N NYG FK++N T YV+Y G VV E PV +  +PAR K NI++S  + A K
Sbjct: 65  TMDMVITIGNPNYGSFKFRNSTGYVNYRGDVVGEIPVAEDLVPARSKTNITTSADLMAGK 124

Query: 127 LISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIIDSVCE 186
           +++N  F GD L G +N ++T  LHG+V VLK F   AT+ ++C IS+ + S+ I S C+
Sbjct: 125 IMTNPEFFGDFLLGNLNMTATAVLHGKVSVLKIFNLHATTFTTCYISVFVNSRDIQSTCK 184

Query: 187 SKVEL 191
           SK++L
Sbjct: 185 SKIKL 189

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547077|ref|XP_003541944.1| PREDICTED: uncharacterized protein LOC100783184 [Glycine max]

 Score =  165 bits (417), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 79/185 (42%), Positives = 121/185 (65%)

Query: 7   SSKCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFPTIQLNV 66
           ++K LK C  ++ + LIIV IV++ LFFT+FKPK+P IT  P+ LE  +    P I  NV
Sbjct: 2   ANKGLKFCLIVSLLFLIIVTIVIVTLFFTVFKPKDPNITVHPIGLEHFDFSLLPNITANV 61

Query: 67  TLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADK 126
           +LG+V+T++N NYG F++ N   Y+++H  VV E P+    +PA G+ N+++       K
Sbjct: 62  SLGMVITIENPNYGSFEFTNSIGYINFHDTVVGEVPIGAELVPAHGQINVNTWANFMVAK 121

Query: 127 LISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIIDSVCE 186
           LIS   F  D+LSG +NF+ST++L G   + K FK KAT+ SSC+IS+ +  + +D+ C 
Sbjct: 122 LISVPKFWSDVLSGTLNFTSTSSLPGIARMFKIFKLKATAYSSCNISLRIVPRNVDTKCI 181

Query: 187 SKVEL 191
           SK++L
Sbjct: 182 SKIKL 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550012|ref|XP_003543384.1| PREDICTED: uncharacterized protein LOC100807939 [Glycine max]

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 79/185 (42%), Positives = 120/185 (64%)

Query: 7   SSKCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFPTIQLNV 66
           +S+ LK C  ++ + LIIV IV++ LFFT+F+PK+P I   PV  E  N      +  NV
Sbjct: 2   ASRGLKICLAMSLLFLIIVAIVIVALFFTIFRPKDPNIIVHPVGFENFNPSLLTNVTANV 61

Query: 67  TLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADK 126
           +LG+++T++N NY  F+Y N T Y+ +H  VV + P+    +P R + N+++S      K
Sbjct: 62  SLGMLITIENSNYENFEYPNATGYIKFHDTVVGQVPIVGELVPPRSQINVNTSANFMVAK 121

Query: 127 LISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIIDSVCE 186
           LI++ NFL D LSG++NF+ST +L G+  +LK  K KAT  SSCDIS+ + S+ +DS C 
Sbjct: 122 LINDPNFLSDFLSGIVNFTSTASLPGKAHMLKIIKFKATVYSSCDISLNITSRNVDSKCI 181

Query: 187 SKVEL 191
           SK++L
Sbjct: 182 SKIKL 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357480805|ref|XP_003610688.1| hypothetical protein MTR_5g005950 [Medicago truncatula] gi|355512023|gb|AES93646.1| hypothetical protein MTR_5g005950 [Medicago truncatula]

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 87/191 (45%), Positives = 130/191 (68%), Gaps = 1/191 (0%)

Query: 1   MVCGKRSSKCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFP 60
           M CG R +K LK CCG+T+I LI+VL++L+ILF T FK K+P IT + V   + +L   P
Sbjct: 1   MACGLRCTKGLKICCGVTTIFLIVVLVILLILFLTDFKQKDPTITLQSVKFGRFHLDILP 60

Query: 61  TIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSL 120
            + LN++L ++VTVDN N+G F YQN +AY++Y G ++A AP+ +  IPA    NIS+ L
Sbjct: 61  ILDLNLSLAILVTVDNPNHGSFTYQNSSAYLNYRGNLLATAPLHEDTIPALKSHNISTIL 120

Query: 121 TIFADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQI 180
            ++ D +    + LGD L GV+NF+STTTL G+V +  + K KAT+ S+CDI + +  QI
Sbjct: 121 NVYVD-VTEVPDLLGDYLGGVINFTSTTTLVGKVKIFNFIKIKATTYSTCDIFVYIHGQI 179

Query: 181 IDSVCESKVEL 191
            +S C++K++ 
Sbjct: 180 ANSTCDNKIKF 190

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357453465|ref|XP_003597010.1| hypothetical protein MTR_2g088610 [Medicago truncatula] gi|355486058|gb|AES67261.1| hypothetical protein MTR_2g088610 [Medicago truncatula]

 Score =  149 bits (375), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 118/187 (63%), Gaps = 6/187 (3%)

Query: 7   SSKCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFPTIQLNV 66
           + + LK C  ++++ LII+ IV + L  T+FKPK+P I A   +  + N L    I +N+
Sbjct: 2   AKRGLKICLIVSTLFLIIISIVTLTLILTIFKPKDPTIRA---NFAQFNFLS-ANITMNM 57

Query: 67  TLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADK 126
           TLG+V+T+ N NY GFKYQN  +Y++YH  +V   P+E   +PAR + N+++S  +   K
Sbjct: 58  TLGMVITIVNPNYAGFKYQNSISYINYHDTIVGNVPIESQLVPARSEINVTTSADLMVGK 117

Query: 127 LISNSNFLGDILSGVM--NFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIIDSV 184
           L+ N  F  D++   M  NF+STT L G+ I+LKY K KA +  SCDIS+ + S   DS 
Sbjct: 118 LLQNPQFWKDMVHNRMIINFTSTTELPGKAILLKYIKLKAITYCSCDISVNITSNGADSN 177

Query: 185 CESKVEL 191
           C+S+++L
Sbjct: 178 CKSRIKL 184

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	191
TAIR|locus:2080320	235	AT3G54200 "AT3G54200" [Arabido	0.973	0.791	0.345	7.6e-25
TAIR|locus:2062917	221	AT2G46150 "AT2G46150" [Arabido	0.968	0.837	0.265	2.7e-13
TAIR|locus:504955821	189	AT3G05975 "AT3G05975" [Arabido	0.816	0.825	0.268	1.2e-12
TAIR|locus:2142040	215	AT4G13270 "AT4G13270" [Arabido	0.795	0.706	0.232	6.1e-09
TAIR|locus:1006230721	214	AT1G64065 "AT1G64065" [Arabido	0.628	0.560	0.277	2.5e-05
TAIR|locus:2100177	186	AT3G44380 "AT3G44380" [Arabido	0.612	0.629	0.272	0.00025

TAIR|locus:2080320 AT3G54200 "AT3G54200" [Arabidopsis thaliana (taxid:3702)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 66/191 (34%), Positives = 103/191 (53%)

Query:     5 KRSSKCLKCCCGITSXXXXXXXXXXXXXFFTLFKPKEPKITAKPVDLEKINLLFFPT--- 61
             +R   C  C C  T               FTLFKPK P  T   V ++++     P    
Sbjct:    46 RRKRNCKICIC-FTILLILLIAIVIVILAFTLFKPKRPTTTIDSVTVDRLQASVNPLLLK 104

Query:    62 IQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLT 121
             + LN+TL V +++ N N  GF Y + +A ++Y G V+ EAP+   RI AR    ++ +LT
Sbjct:   105 VLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLT 164

Query:   122 IFADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQII 181
             + AD+L+S +  L D+++GV+  ++   + G+V VLK FK K  SSSSCD+SI +  + +
Sbjct:   165 LMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNV 224

Query:   182 DSV-CESKVEL 191
              S  C+   +L
Sbjct:   225 TSQHCKYSTKL 235

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2062917 AT2G46150 "AT2G46150" [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 51/192 (26%), Positives = 93/192 (48%)

Query:     6 RSSKCLKCCCGITSXXXXXXXXXXXXXFFTLFKPKEPKITAKPVDLEKINLLFFPT-IQL 64
             RS   +KC   +T+             F T+F+ K+P I    V +  ++ +     +QL
Sbjct:    31 RSRNRIKCSICVTATSLILTTIVLTLVF-TVFRVKDPIIKMNGVMVNGLDSVTGTNQVQL 89

Query:    65 ---NVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLT 121
                N+++ V V+V N N   FKY N T  + Y G +V EA    G+        ++ ++ 
Sbjct:    90 LGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKARPHRTSRMNVTVD 149

Query:   122 IFADKLISNSNFLGDIL-SGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQI 180
             I  D+++S+     +I  SG++N  S T + G+V ++   K+  T   +C +++ +  Q 
Sbjct:   150 IMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVKMNCTMAVNITGQA 209

Query:   181 IDSV-CESKVEL 191
             I  V C+ K++L
Sbjct:   210 IQDVDCKKKIDL 221

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:504955821 AT3G05975 "AT3G05975" [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 43/160 (26%), Positives = 77/160 (48%)

Query:    36 LFKPKEP--KITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSY 93
             +FKPK P  +  +  VD    N+     +QLN TL + + + N N   F+Y+     V Y
Sbjct:    30 VFKPKHPILQTVSSTVDGISTNISLPYEVQLNFTLTLEMLLKNPNVADFEYKTVENLVYY 89

Query:    94 HGVVVAEAPVEDGRIPARGKQNISSSLTIFADKLISN-SNFLGDILSGVMNFSSTTTLHG 152
                +V    +    +PA+G   +   L +  DK ++N  + + D+L G +   +   + G
Sbjct:    90 RDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLDKFVANLGDIVQDVLHGKIVMETRAKMPG 149

Query:   153 EVIVLKYFKQKATSSSSCDISIVLQSQII-DSVCESKVEL 191
             ++ +L  FK    S S C++ +   S ++ D VC+ K +L
Sbjct:   150 KITLLGIFKIPLDSISHCNLVLGFPSMVVEDQVCDLKTKL 189

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2142040 AT4G13270 "AT4G13270" [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 6.1e-09, P = 6.1e-09
 Identities = 36/155 (23%), Positives = 73/155 (47%)

Query:    36 LFKPKEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHG 95
             L  P +P IT   ++L  I+++    I L+++  + + V NR++    Y +    + Y G
Sbjct:    62 LLYPSDPDITVSRINLNHISVVDSHKIALDLSFSLTIKVRNRDFFSLDYDSLVVSIGYRG 121

Query:    96 VVVAEAPVEDGRIPARGKQNISSSLTIFADKLISNSNFL-GDILSGVMNFSSTTTLHGEV 154
               +     + G + AR    I ++L +   +++ +  +L GD+  GV+ F +   + G++
Sbjct:   122 RELGLVKSKGGHLKARDSSYIDATLELDGLEVVHDVIYLIGDLAKGVIPFDTIAQVQGDL 181

Query:   155 IVLKYFKQKATSSSSCDISIVLQSQIIDSV-CESK 188
              VL  F        SC++ + + +Q I    C  K
Sbjct:   182 GVL-LFNIPIQGKVSCEVYVNVNNQKISHQDCHRK 215

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:1006230721 AT1G64065 "AT1G64065" [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 35/126 (27%), Positives = 61/126 (48%)

Query:    65 NVTLGVVVTVDNRNYGGFKYQNGTAYVSY--HGVVVAEAPVEDGRIPARGKQNISSSLT- 121
             N TL   +++ N N+G F++++ T  V Y  HGVV  E  +E  R+ A     I+  +  
Sbjct:    91 NATLVSDISIRNSNFGAFEFEDSTLRVVYADHGVV-GETKIEGRRVEAHKTVRITGVVVE 149

Query:   122 IFADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQII 181
             I + +L+   +   D+  G +   S   + G + VL   + K  S  SC + + L  + I
Sbjct:   150 IGSFRLLDTKDLDKDLRLGFLELRSVAEVRGRIKVLGRKRWKV-SVMSCTMRLNLTGRFI 208

Query:   182 DSV-CE 186
              ++ CE
Sbjct:   209 QNLLCE 214

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2100177 AT3G44380 "AT3G44380" [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 0.00025, P = 0.00025
 Identities = 33/121 (27%), Positives = 51/121 (42%)

Query:    38 KPKEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVV 97
             KPK+P      +DL  + L   P +   + L V VT  N N     Y +    + Y G V
Sbjct:    32 KPKDPTFHLISIDLTSLKLNL-PVLDAELMLTVHVT--NPNIAAIHYSSTKMTILYDGTV 88

Query:    98 VAEAPVEDGRIPARGKQNISSSLTIFADKLISNSN-FLGDILSGVMNFSSTTTLHGEVIV 156
             +  A V+ G  PAR  Q +     +   +L  ++  F  D+ +  M   +  T+ G   V
Sbjct:    89 LGSAEVKAGSQPARSCQLLRLPARLDGMELAQHARQFFSDVANREMKLEAKLTIEGAAKV 148

Query:   157 L 157
             L
Sbjct:   149 L 149


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.135   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      191       178   0.00086  109 3  11 22  0.40    32
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  558 (59 KB)
  Total size of DFA:  136 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.92u 0.10s 16.02t   Elapsed:  00:00:01
  Total cpu time:  15.92u 0.10s 16.02t   Elapsed:  00:00:01
  Start:  Thu May  9 23:01:06 2013   End:  Thu May  9 23:01:07 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0009269 "response to desiccation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	191
PLN03160	219	PLN03160, PLN03160, uncharacterized protein; Provi	2e-32
pfam03168	98	pfam03168, LEA_2, Late embryogenesis abundant prot	0.002

>gnl|CDD|215609 PLN03160, PLN03160, uncharacterized protein; Provisional

 Score =  115 bits (290), Expect = 2e-32
 Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 5   KRSSKCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFPTIQL 64
            R   C+KCC  IT+ LLI+   +L+ L FT+F+ K+P I    V + K+ L+   T++ 
Sbjct: 31  TRRRNCIKCCGCITATLLILATTILV-LVFTVFRVKDPVIKMNGVTVTKLELINNTTLRP 89

Query: 65  --NVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTI 122
             N+TL   V+V N N   FKY N T  + Y G VV EA    G+  AR    ++ ++ I
Sbjct: 90  GTNITLIADVSVKNPNVASFKYSNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVDI 149

Query: 123 FADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQIID 182
             DK++S    L DI SG++N +S T + G+V +LK  K+      +C +++ + SQ I 
Sbjct: 150 IPDKILSVPGLLTDISSGLLNMNSYTRIGGKVKILKIIKKHVVVKMNCTMTVNITSQAIQ 209

Query: 183 SV-CESKVEL 191
              C+  V+L
Sbjct: 210 GQKCKRHVDL 219

Length = 219

>gnl|CDD|217400 pfam03168, LEA_2, Late embryogenesis abundant protein

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 72  VTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVED-GRIPARGKQNISSSLTIFADKLIS 129
           + V N N     Y   +  +SY+G  +A       G +PA G   +   +T+  D L  
Sbjct: 2   LRVRNPNSFPLPYDGLSYDLSYNGQELASGTSPQPGTVPAGGTTTLEVPVTVSLDDLAR 60

Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511, pfam07427, has now been merged into this family. Length = 98

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	191
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.53
smart00769	100	WHy Water Stress and Hypersensitive response.	98.89
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	98.61
COG5608	161	LEA14-like dessication related protein [Defense me	98.02
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	97.2
PLN03160	219	uncharacterized protein; Provisional	89.89
PF14155	112	DUF4307: Domain of unknown function (DUF4307)	88.99
PRK10893	192	lipopolysaccharide exporter periplasmic protein; P	86.98
KOG3950	292	consensus Gamma/delta sarcoglycan [Cytoskeleton]	84.32
PF11906	149	DUF3426: Protein of unknown function (DUF3426); In	81.61

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=8.9e-47  Score=303.30  Aligned_cols=187  Identities=33%  Similarity=0.543  Sum_probs=174.1

Q ss_pred             cccccCceEEehHHHHHHHHHHHHHHhheeeEeecCCCeEEEEEEEEeeeeeec--CcceeEEEEEEEEEEEECCCceeE
Q 044545            5 KRSSKCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLF--FPTIQLNVTLGVVVTVDNRNYGGF   82 (191)
Q Consensus         5 ~~~~r~~~~c~~~~~~~li~~~~i~~il~~lv~rP~~P~~~v~s~~l~~~~~~~--~~~~~l~~~l~~~v~v~NPN~~~i   82 (191)
                      ++|+|+|++||++++++++++++++++++|++||||+|+|+|+++++++|+++.  .++..+|++++++++++|||+++|
T Consensus        30 ~~~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~~~~  109 (219)
T PLN03160         30 KTRRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNVASF  109 (219)
T ss_pred             ccccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCceeE
Confidence            356777888999999988888999999999999999999999999999999864  236789999999999999999999


Q ss_pred             EEeccEEEEEECCEEEEeeeeCCCcccCCCceeEEEEEEEeeeeeccCccccccccCCeEEEEEEEEEEEEEEEEEEEee
Q 044545           83 KYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLTIFADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQ  162 (191)
Q Consensus        83 ~y~~~~~~v~Y~g~~lg~~~vp~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~d~~~G~v~l~~~~~v~~rv~~~~~~~~  162 (191)
                      +|+++++.++|+|+.+|++.+|+|+|++|+++.+++++.+.++.+.++++|.+|+++|.++|+++++++||+++++++++
T Consensus       110 ~Y~~~~~~v~Y~g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~~~~L~~D~~~G~v~l~~~~~v~gkVkv~~i~k~  189 (219)
T PLN03160        110 KYSNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILSVPGLLTDISSGLLNMNSYTRIGGKVKILKIIKK  189 (219)
T ss_pred             EEcCeEEEEEECCEEEEEEEcCCcccCCCCeEEEEEEEEEEeceeccchhHHHHhhCCeEEEEEEEEEEEEEEEEEEEEE
Confidence            99999999999999999999999999999999999999888877766788999999999999999999999999999999


Q ss_pred             eEEEEEEeEEEEEcccceee-ecccccccC
Q 044545          163 KATSSSSCDISIVLQSQIID-SVCESKVEL  191 (191)
Q Consensus       163 ~~~~~v~C~~~v~~~~~~i~-~~C~~~~k~  191 (191)
                      +++++++|++.|+..+.+++ ++|+.++++
T Consensus       190 ~v~~~v~C~v~V~~~~~~i~~~~C~~~~~~  219 (219)
T PLN03160        190 HVVVKMNCTMTVNITSQAIQGQKCKRHVDL  219 (219)
T ss_pred             EEEEEEEeEEEEECCCCEEeccEecccccC
Confidence            99999999999999999999 999999875

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.53  E-value=1.6e-14  Score=101.78  Aligned_cols=98  Identities=21%  Similarity=0.267  Sum_probs=73.2

Q ss_pred             EEEEECCCceeEEEeccEEEEEECCEEEE-eeeeCCCcccCCCceeEEEEEEEeeeeeccCccccccccCCeEEEEEEEE
Q 044545           71 VVTVDNRNYGGFKYQNGTAYVSYHGVVVA-EAPVEDGRIPARGKQNISSSLTIFADKLISNSNFLGDILSGVMNFSSTTT  149 (191)
Q Consensus        71 ~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg-~~~vp~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~d~~~G~v~l~~~~~  149 (191)
                      +++++|||.++++|++.++.++|+|..+| ....|+|.|++++++.+.+++.++...+.  ..+.++. +|..++++..+
T Consensus         1 ~l~v~NPN~~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l~--~~l~~~~-~~~~~~~v~~~   77 (101)
T PF03168_consen    1 TLSVRNPNSFGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDLP--RLLKDLL-AGRVPFDVTYR   77 (101)
T ss_dssp             EEEEEESSSS-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHHH--HHHHHHH-HTTSCEEEEEE
T ss_pred             CEEEECCCceeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHHH--HHHHhhh-ccccceEEEEE
Confidence            57999999999999999999999999999 77889999999999999988877765442  2234444 55677788888


Q ss_pred             EEEEEEE-EEEEeeeEEEEEEeE
Q 044545          150 LHGEVIV-LKYFKQKATSSSSCD  171 (191)
Q Consensus       150 v~~rv~~-~~~~~~~~~~~v~C~  171 (191)
                      +++++++ ...+..+.+..++|+
T Consensus        78 ~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   78 IRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             EEEEEEEcccceeeeEEEeEEeE
Confidence            8888885 333334455555664

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.89  E-value=1.6e-08  Score=71.67  Aligned_cols=84  Identities=17%  Similarity=0.245  Sum_probs=66.6

Q ss_pred             ceeEEEEEEEEEEEECCCceeEEEeccEEEEEECCEEEEeeeeC-CCcccCCCceeEEEEEEEeeeeeccCccccccccC
Q 044545           61 TIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVE-DGRIPARGKQNISSSLTIFADKLISNSNFLGDILS  139 (191)
Q Consensus        61 ~~~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~vp-~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~d~~~  139 (191)
                      ...++.++.+.+.+.|||.+++.|++.+..++|+|..+|++..+ ++.+++++++.+.+++.+.. ..  ...+..++..
T Consensus        10 ~~~~~~~~~l~l~v~NPN~~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~~-~~--~~~~~~~l~~   86 (100)
T smart00769       10 VSGLEIEIVLKVKVQNPNPFPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVNL-FL--AEALIWHIAN   86 (100)
T ss_pred             ccceEEEEEEEEEEECCCCCccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEeeh-hH--hHHHHHhhcc
Confidence            34678899999999999999999999999999999999999996 79999999999999988842 11  1334455555


Q ss_pred             Ce-EEEEEE
Q 044545          140 GV-MNFSST  147 (191)
Q Consensus       140 G~-v~l~~~  147 (191)
                      |+ ++++++
T Consensus        87 ~~~~~y~l~   95 (100)
T smart00769       87 GEEIPYRLD   95 (100)
T ss_pred             CCCccEEEE
Confidence            53 444333

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=98.61  E-value=1.4e-06  Score=70.48  Aligned_cols=87  Identities=13%  Similarity=0.181  Sum_probs=66.6

Q ss_pred             EeecCCCeEEEEEEEEeeeeeecCcceeEEEEEEEEEEEECCCceeEEEeccEEEEEECCEEEEeeeeCC-CcccCCCce
Q 044545           36 LFKPKEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVED-GRIPARGKQ  114 (191)
Q Consensus        36 v~rP~~P~~~v~s~~l~~~~~~~~~~~~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~vp~-~~~~~~~~~  114 (191)
                      .+-||.-.++-.++......++. .......+++-.+.+.|||++.+...+.++.+.|....+|.+.... ..++|++.+
T Consensus        95 FLfPRsV~v~~~gv~s~~V~f~~-~~~~v~l~itn~lNIsN~NFy~V~Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~  173 (238)
T PF07092_consen   95 FLFPRSVTVSPVGVKSVTVSFNP-DKSTVQLNITNTLNISNPNFYPVTVTNLSIQVLYMKTVVGKGKNSNITVIGPRSSK  173 (238)
T ss_pred             EEeCcEEEEecCcEEEEEEEEeC-CCCEEEEEEEEEEEccCCCEEEEEEEeEEEEEEEEEeEEeeeEecceEEecccCCc
Confidence            34588766665555554444442 2346778888899999999999999999999999999999998865 478899988


Q ss_pred             eEEEEEEEe
Q 044545          115 NISSSLTIF  123 (191)
Q Consensus       115 ~~~~~~~~~  123 (191)
                      .+..++...
T Consensus       174 q~~~tV~t~  182 (238)
T PF07092_consen  174 QVNYTVKTT  182 (238)
T ss_pred             eEEEEeeEE
Confidence            877765543

The function of this family is unknown.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=98.02  E-value=0.00049  Score=51.94  Aligned_cols=110  Identities=14%  Similarity=0.167  Sum_probs=74.0

Q ss_pred             cCCCeEEEEEEEEeeeeeecCcceeEEEEEEEEEEEECCCceeEEEeccEEEEEECCEEEEeeee-CCCcccCCCceeEE
Q 044545           39 PKEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPV-EDGRIPARGKQNIS  117 (191)
Q Consensus        39 P~~P~~~v~s~~l~~~~~~~~~~~~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~v-p~~~~~~~~~~~~~  117 (191)
                      -+.|.+.--.+..-...       .....+-.++.++|||-+.+-..+.+..++-+|.++|.+.. -++..++++..++.
T Consensus        30 ~~~p~ve~~ka~wGkvt-------~s~~EiV~t~KiyNPN~fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvd  102 (161)
T COG5608          30 VKKPGVESMKAKWGKVT-------NSETEIVGTLKIYNPNPFPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVD  102 (161)
T ss_pred             cCCCCceEEEEEEEEEe-------ccceEEEEEEEecCCCCcceeeeceEEEEEEcceEeeccccccceEECCCCeEEEE
Confidence            34565554444443332       22345667889999999999999999999999999999877 55899999999999


Q ss_pred             EEEEEeeeeeccCccccccccCCeE-EEEEEEEEEEEEEEEEE
Q 044545          118 SSLTIFADKLISNSNFLGDILSGVM-NFSSTTTLHGEVIVLKY  159 (191)
Q Consensus       118 ~~~~~~~~~v~~~~~l~~d~~~G~v-~l~~~~~v~~rv~~~~~  159 (191)
                      +++..+..++.  ......+..|+= +  ++.++.+.+++++.
T Consensus       103 v~l~~d~~~~k--e~w~~hi~ngErs~--Ir~~i~~~v~vg~~  141 (161)
T COG5608         103 VPLRLDNSKIK--EWWVTHIENGERST--IRVRIKGVVKVGGM  141 (161)
T ss_pred             EEEEEehHHHH--HHHHHHhhccCccc--EEEEEEEEEEEccE
Confidence            98877753331  123346666641 2  23345555555443

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=97.20  E-value=0.0014  Score=56.54  Aligned_cols=37  Identities=11%  Similarity=0.043  Sum_probs=29.8

Q ss_pred             eEEEEEEEEEEEECCCceeEEEeccEEEEEECCEEEE
Q 044545           63 QLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVA   99 (191)
Q Consensus        63 ~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg   99 (191)
                      .-..-|+++|.+.|||.+.|..+..++.++-+-..+|
T Consensus       345 ~qELmfdl~V~A~NPn~~~V~I~d~dldIFAKS~yvg  381 (387)
T PF12751_consen  345 EQELMFDLTVEAFNPNWFTVTIDDMDLDIFAKSRYVG  381 (387)
T ss_pred             cceEEEeeEEEEECCCeEEEEeccceeeeEecCCccC
Confidence            3455678899999999999999999999986544444

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>PLN03160 uncharacterized protein; Provisional

Probab=89.89  E-value=0.83  Score=36.84  Aligned_cols=30  Identities=13%  Similarity=0.284  Sum_probs=15.4

Q ss_pred             ccCceEEehHHHHHHHHHHHHHHhheeeEe
Q 044545            8 SKCLKCCCGITSILLIIVLIVLIILFFTLF   37 (191)
Q Consensus         8 ~r~~~~c~~~~~~~li~~~~i~~il~~lv~   37 (191)
                      +++.++|+.|+..++.++.++++++..++|
T Consensus        30 ~~~r~~~~~c~~~~~a~~l~l~~v~~~l~~   59 (219)
T PLN03160         30 KTRRRNCIKCCGCITATLLILATTILVLVF   59 (219)
T ss_pred             ccccccceEEHHHHHHHHHHHHHHHHheee
Confidence            344445555555555555555555555444

>PF14155 DUF4307: Domain of unknown function (DUF4307)

Probab=88.99  E-value=6.8  Score=28.15  Aligned_cols=14  Identities=29%  Similarity=0.408  Sum_probs=9.4

Q ss_pred             EECCEEEEee--eeCC
Q 044545           92 SYHGVVVAEA--PVED  105 (191)
Q Consensus        92 ~Y~g~~lg~~--~vp~  105 (191)
                      -|++..+|.-  .+|+
T Consensus        71 ~~d~aeVGrreV~vp~   86 (112)
T PF14155_consen   71 DYDGAEVGRREVLVPP   86 (112)
T ss_pred             eCCCCEEEEEEEEECC
Confidence            4778889854  4455

>PRK10893 lipopolysaccharide exporter periplasmic protein; Provisional

Probab=86.98  E-value=12  Score=29.49  Aligned_cols=20  Identities=15%  Similarity=0.164  Sum_probs=17.0

Q ss_pred             ecCCCeEEEEEEEEeeeeee
Q 044545           38 KPKEPKITAKPVDLEKINLL   57 (191)
Q Consensus        38 rP~~P~~~v~s~~l~~~~~~   57 (191)
                      .++.|+|.+++++...|+.+
T Consensus        37 ~~~~Pdy~~~~~~~~~yd~~   56 (192)
T PRK10893         37 NNNDPTYQSQHTDTVVYNPE   56 (192)
T ss_pred             CCCCCCEEEeccEEEEECCC
Confidence            46789999999999988865

>KOG3950 consensus Gamma/delta sarcoglycan [Cytoskeleton]

Probab=84.32  E-value=4.2  Score=33.36  Aligned_cols=21  Identities=24%  Similarity=0.177  Sum_probs=16.6

Q ss_pred             ceeEEEEEEEEEEEECCC-cee
Q 044545           61 TIQLNVTLGVVVTVDNRN-YGG   81 (191)
Q Consensus        61 ~~~l~~~l~~~v~v~NPN-~~~   81 (191)
                      +..+...=+++++++||| .+.
T Consensus       103 ~l~~~S~rnvtvnarn~~g~v~  124 (292)
T KOG3950|consen  103 PLYLQSARNVTVNARNPNGKVT  124 (292)
T ss_pred             ceEEEeccCeeEEccCCCCcee
Confidence            346777778899999999 764

>PF11906 DUF3426: Protein of unknown function (DUF3426); InterPro: IPR021834 This family of proteins are functionally uncharacterised

Probab=81.61  E-value=17  Score=27.00  Aligned_cols=58  Identities=17%  Similarity=0.012  Sum_probs=38.9

Q ss_pred             EEEEEEEEeeeeeecCcceeEEEEEEEEEEEECCCceeEEEeccEEEEE-ECCEEEEeeee
Q 044545           44 ITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVS-YHGVVVAEAPV  103 (191)
Q Consensus        44 ~~v~s~~l~~~~~~~~~~~~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~-Y~g~~lg~~~v  103 (191)
                      -.++.+++.+..+...+  .-+-.+.++.+++|.......|-..+++++ -+|+.+++-.+
T Consensus        48 ~~~~~l~i~~~~~~~~~--~~~~~l~v~g~i~N~~~~~~~~P~l~l~L~D~~g~~l~~r~~  106 (149)
T PF11906_consen   48 RDIDALKIESSDLRPVP--DGPGVLVVSGTIRNRADFPQALPALELSLLDAQGQPLARRVF  106 (149)
T ss_pred             cCcceEEEeeeeEEeec--CCCCEEEEEEEEEeCCCCcccCceEEEEEECCCCCEEEEEEE
Confidence            44555555544433211  223445667799999999999999999988 56888887666

This protein is found in bacteria. Proteins in this family are typically between 262 to 463 amino acids in length.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	191
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.87
1xo8_A	151	AT1G01470; structural genomics, protein structure	98.6
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	98.21

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.87  E-value=1.4e-08  Score=77.97  Aligned_cols=103  Identities=14%  Similarity=0.170  Sum_probs=81.3

Q ss_pred             CCCeEEEEEEEEeeeeeecCcceeEEEEEEEEEEEECCCceeEEEeccEEEEEECCEEEEeeeeCC-CcccCCCceeEEE
Q 044545           40 KEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVED-GRIPARGKQNISS  118 (191)
Q Consensus        40 ~~P~~~v~s~~l~~~~~~~~~~~~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~vp~-~~~~~~~~~~~~~  118 (191)
                      ++|++++.++++.+++..       ..++.+.++++|||.+.+.+...+..+.-+|..++++..+. +.+++++++.+.+
T Consensus        43 ~~PeV~v~~v~~~~~~l~-------~~~~~l~LrV~NPN~~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~V  115 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRD-------GVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDV  115 (174)
T ss_dssp             CCCEEEEEEEEEEEECSS-------SEEEEEEEEEEECSSSCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEE
T ss_pred             CCCEEEEEEeEEeccccc-------eEEEEEEEEEECCCCCCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEE
Confidence            689999999999877643       36678889999999999999999999999999999999966 8999999999999


Q ss_pred             EEEEeeeeeccCcccccccc-CCeEEEEEEEEEEE
Q 044545          119 SLTIFADKLISNSNFLGDIL-SGVMNFSSTTTLHG  152 (191)
Q Consensus       119 ~~~~~~~~v~~~~~l~~d~~-~G~v~l~~~~~v~~  152 (191)
                      ++++....+.   ++.+++. .+.++..+++.+.+
T Consensus       116 pv~v~~~~l~---~~~~~l~~~~~i~Y~L~g~L~i  147 (174)
T 1yyc_A          116 PVKVAYSIAV---SLMKDMCTDWDIDYQLDIGLTF  147 (174)
T ss_dssp             EEEESHHHHH---HTCCCCCSSEEECEEEEEEEEE
T ss_pred             EEEEEHHHHH---HHHHhcCCCCccceEEEEEEEe
Confidence            9988754332   2334443 34666666554443

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=98.60  E-value=8.7e-09  Score=77.43  Aligned_cols=102  Identities=16%  Similarity=0.173  Sum_probs=78.9

Q ss_pred             CCCeEEEEEEEEeeeeeecCcceeEEEEEEEEEEEECCCceeEEEeccEEEEEECCEEEEeeeeC-CCcccCCCceeEEE
Q 044545           40 KEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVE-DGRIPARGKQNISS  118 (191)
Q Consensus        40 ~~P~~~v~s~~l~~~~~~~~~~~~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~vp-~~~~~~~~~~~~~~  118 (191)
                      ++|++++.++++.+++.       ...++.+.++++|||.+.+.+.+.+..+.-+|..++++..+ ++.+++++++.+.+
T Consensus        20 ~~P~v~v~~v~~~~~~~-------~~~~~~~~l~V~NPN~~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~v   92 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNR-------DSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDI   92 (151)
T ss_dssp             CSCCCBCSEEEECCCTT-------TEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEE
T ss_pred             CCCEEEEEEeEEeccCc-------ceeEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEE
Confidence            67999999999877653       24567889999999999999999999998899999999885 48999999999999


Q ss_pred             EEEEeeeeeccCccccccc-cCCeEEEEEEEEEE
Q 044545          119 SLTIFADKLISNSNFLGDI-LSGVMNFSSTTTLH  151 (191)
Q Consensus       119 ~~~~~~~~v~~~~~l~~d~-~~G~v~l~~~~~v~  151 (191)
                      ++++....+   .++.+++ ..+.++.++++++.
T Consensus        93 pv~v~~~~l---~~~~~~l~~~~~i~Y~l~g~l~  123 (151)
T 1xo8_A           93 PVVVPYSIL---FNLARDVGVDWDIDYELQIGLT  123 (151)
T ss_dssp             CCCEEHHHH---HHHHHHHHHHSEEEEEEEEEEE
T ss_pred             EEEEEHHHH---HHHHHhcccCCcccEEEEEEEE
Confidence            888774322   2333443 23577776655554

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=98.21  E-value=8.4e-06  Score=59.99  Aligned_cols=64  Identities=14%  Similarity=0.084  Sum_probs=56.0

Q ss_pred             EEEEEEEEEEECCCceeEEEeccEEEEEECCEEEEeeee-CCCcccCCCceeEEEEEEEeeeeec
Q 044545           65 NVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPV-EDGRIPARGKQNISSSLTIFADKLI  128 (191)
Q Consensus        65 ~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~v-p~~~~~~~~~~~~~~~~~~~~~~v~  128 (191)
                      ...|.+.+++.|||.+.+.++..+..++..|..+|++.. ..+.+++.+++.+.+++..+..++.
T Consensus        17 ~t~~~~~l~V~NPN~~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~   81 (136)
T 3but_A           17 QTEIVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLR   81 (136)
T ss_dssp             EEEEEEEEEEECCSSSCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHT
T ss_pred             EEEEEEEEEEeCCCCcceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhH
Confidence            456788999999999999999999999999999999875 6799999999999998888855443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	191
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.69

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.69  E-value=1.9e-09  Score=79.25  Aligned_cols=105  Identities=15%  Similarity=0.124  Sum_probs=79.6

Q ss_pred             ecCCCeEEEEEEEEeeeeeecCcceeEEEEEEEEEEEECCCceeEEEeccEEEEEECCEEEEeeeeC-CCcccCCCceeE
Q 044545           38 KPKEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVE-DGRIPARGKQNI  116 (191)
Q Consensus        38 rP~~P~~~v~s~~l~~~~~~~~~~~~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~vp-~~~~~~~~~~~~  116 (191)
                      +-+.|++++.++++.++...       ..++.+.++++|||.+++..+..+..++.+|..++++..+ ++..++++++.+
T Consensus        18 ~~~kPev~l~~v~i~~v~~~-------~~~l~~~l~V~NPN~~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v   90 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNRD-------SVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTAL   90 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTTT-------EECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEE
T ss_pred             CCCCCeEEEEEEEeeecccc-------eEEEEEEEEEECCCCCceeeeeEEEEEEECCEEEEeEecCCCcEEcCCCcEEE
Confidence            45789999999999877643       4567888999999999999999999999999999999884 589999999999


Q ss_pred             EEEEEEeeeeeccCcccccccc-CCeEEEEEEEEEEE
Q 044545          117 SSSLTIFADKLISNSNFLGDIL-SGVMNFSSTTTLHG  152 (191)
Q Consensus       117 ~~~~~~~~~~v~~~~~l~~d~~-~G~v~l~~~~~v~~  152 (191)
                      .+++++....+   ..+.+|+. ++.++.++++.+..
T Consensus        91 ~vpv~v~~~~l---~~~~~~i~~~~~i~Y~l~g~l~~  124 (151)
T d1xo8a_          91 DIPVVVPYSIL---FNLARDVGVDWDIDYELQIGLTI  124 (151)
T ss_dssp             EECCCEEHHHH---HHHHHHHHHHSEEEEEEEEEEEE
T ss_pred             EEEEEEEHHHH---HHHHHhhccCCCccEEEEEEEEE
Confidence            99887764322   23344443 34666654444443