Citrus Sinensis ID: 044735

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180---
Protein Sequence
GSESFPFVNQTAIIFFPLNLTKRVHFIEPHQSSNPIQIGNRNKPPHFISPTHKAEKLPPCIQKGFMTTIMASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAASSGSGAEAKPTSAAGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKEQVQD
Secondary Structure (PSIPRED)
ccccccccccEEEEEEEcccccEEEEEcccccccccEEcccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEHHHHHHHHHcEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEEEEccccccEEEEEccccccccEEEccccccccccccccHHcccccHHcHcHHHHHHHHHHHHHHHHHHccccccEccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
gsesfpfvnqtaiiffplnltkrvhfiephqssnpiqignrnkpphfispthkaeklppciqkgfMTTIMASRIAVRNFsrrfsssgkvlsEEEKAAENVYIKKVEQEKLEKMarkgpkpeetpaassgsgaeakptsaagastekvstdqyRNYAVIAGIITGVSALGWYlkssrkkeqvqd
Flexible Loop (DISEMBL)
gsesfpfvnqTAIIFFPLNLTKRVHFIEPHQssnpiqignrnKPPHFISPTHKAEKLPPCIQKGFMTTIMASRIAVRNFSRrfsssgkvlseeekaaenvyikkvEQEKLekmarkgpkpeetpaassgsgaeakptsaagastekvstdqYRNYAVIAGIITGVSALgwylkssrkkeqvqd
Low Complexity Region (SEG)
GSESFPFVNQTAIIFFPLNLTKRVHFIEPHQSSNPIQIGNRNKPPHFISPTHKAEKLPPCIQKGFMTTIMASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAASSGSGAEAKPTSAAGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKEQVQD
Disordered region (IsUnstruct)
*****PFVNQTAIIFFPLNLTKRVHFIE****************************LPPCIQKGFMTTIMASRIAVRNF***********************************************************************QYRNYAVIAGIITGVSALGWYL***********
Disordered Region (DISOPRED)
***SFPFVNQTAIIFFPLNLTKRVHFIEPHQS********RNKPPHFISPTHKAEKLPPCIQKGFMTTIMASRIAVRNFSRRF************AAENVYIK*************************************************RNYAVIAGIITGVSALGWYL***********
Disordered Region (DISEMBL)
GSESFPFVNQTAIIFFPLNLTKRVHFIEPHQSSNPIQIGNRNKPPHFISPTHKAEKLPPCIQKGFMTTIMASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEK*************************************VSTDQYRNYAVIAGIITGVSALGWYLK**********
Disordered Region (DISPRO)
***SFPFVNQTAIIFFPLNLTKRVHFIEPHQSSNPIQIGNRNKPPHFISPTHKAEKLPPCIQKGFMTTIMASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARK********************************TDQYRNYAVIAGIITGVSALGWYLKSS********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
GSESFPFVNQTAIIFFPLNLTKRVHFIEPHQSSNPIQIGNRNKPPHFISPTHKAEKLPPCIQKGFMTTIMASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAASSGSGAEAKPTSAAGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKEQVQD
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	183	2.2.26 [Sep-21-2011]
Q9ZUX4	113	Uncharacterized protein A	yes	no	0.590	0.955	0.571	2e-20

>sp|Q9ZUX4|UMP2_ARATH Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana GN=At2g27730 PE=1 SV=1

 Score = 99.0 bits (245), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 90/119 (75%), Gaps = 11/119 (9%)

Query: 70  MASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAASSG 129
           MA+R A+R  SRRFSS GKVLSEEE+AAENV+IKK+EQEKL+K+AR+GP  +     ++G
Sbjct: 1   MATRNALRIVSRRFSS-GKVLSEEERAAENVFIKKMEQEKLQKLARQGPGEQ-----AAG 54

Query: 130 SGAEAKPTSA-AGASTE---KVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKE-QVQD 183
           S +EAK   A A AS E   KVS D+ RNYAV+AG++  V ++GWYLK+  KK+ +VQ+
Sbjct: 55  SASEAKVAGATASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPEVQE 113

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
224102839	124	predicted protein [Populus trichocarpa]	0.639	0.943	0.664	3e-34
296084902	170	unnamed protein product [Vitis vinifera]	0.666	0.717	0.622	6e-33
225464930	114	PREDICTED: uncharacterized protein At2g2	0.622	1.0	0.657	8e-33
351725021	115	uncharacterized protein LOC100500340 [Gl	0.606	0.965	0.627	2e-31
356539244	115	PREDICTED: uncharacterized protein At2g2	0.606	0.965	0.618	1e-30
388508232	116	unknown [Lotus japonicus]	0.622	0.982	0.612	9e-30
255565661	112	conserved hypothetical protein [Ricinus	0.606	0.991	0.669	1e-29
388519545	120	unknown [Medicago truncatula]	0.622	0.95	0.613	2e-29
449443452	117	PREDICTED: uncharacterized protein At2g2	0.628	0.982	0.598	2e-29
242058957	118	hypothetical protein SORBIDRAFT_03g03689	0.606	0.940	0.570	3e-25

>gi|224102839|ref|XP_002312822.1| predicted protein [Populus trichocarpa] gi|222849230|gb|EEE86777.1| predicted protein [Populus trichocarpa]

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 98/125 (78%), Gaps = 8/125 (6%)

Query: 66  MTTIMASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPA 125
           M T + S  A R   RRFSS GKVL EEEKAAENVYIKKVEQEKLEK+ARKGPKPEET A
Sbjct: 1   MATAIGS-AARRVVLRRFSSGGKVLGEEEKAAENVYIKKVEQEKLEKLARKGPKPEETTA 59

Query: 126 ASSGSG-AEAKPTSAA-----GASTEKVSTDQYRNYAVIAGIITGVSALGWYLKS-SRKK 178
           + SG+  A+ K ++AA     G+STEKVSTD+YRNYAV+AG IT + ALGWYLKS  +K+
Sbjct: 60  SGSGAAPADVKASTAASSTPPGSSTEKVSTDKYRNYAVVAGTITALGALGWYLKSGGKKQ 119

Query: 179 EQVQD 183
           E+V+D
Sbjct: 120 EEVRD 124

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084902|emb|CBI28311.3| unnamed protein product [Vitis vinifera]

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 88/122 (72%)

Query: 62  QKGFMTTIMASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPE 121
           QKG +T+ MA+RIA R  SRR SSSGKVL EEEKAAEN+YIKK EQEKLEK+ARKGPKPE
Sbjct: 42  QKGKVTSAMATRIAARYVSRRLSSSGKVLGEEEKAAENIYIKKAEQEKLEKLARKGPKPE 101

Query: 122 ETPAASSGSGAEAKPTSAAGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKEQV 181
           E P  SSG        S   +ST  VSTD++RNYAV+AG    +  LGWYLKSS KK + 
Sbjct: 102 EKPVTSSGETVTDANPSGPASSTAGVSTDKHRNYAVLAGTAAILGGLGWYLKSSSKKPET 161

Query: 182 QD 183
           + 
Sbjct: 162 RQ 163

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464930|ref|XP_002275103.1| PREDICTED: uncharacterized protein At2g27730, mitochondrial isoform 3 [Vitis vinifera] gi|225464932|ref|XP_002275077.1| PREDICTED: uncharacterized protein At2g27730, mitochondrial isoform 2 [Vitis vinifera] gi|225464934|ref|XP_002275041.1| PREDICTED: uncharacterized protein At2g27730, mitochondrial isoform 1 [Vitis vinifera] gi|147785806|emb|CAN62125.1| hypothetical protein VITISV_037578 [Vitis vinifera]

 Score =  145 bits (365), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 75/114 (65%), Positives = 84/114 (73%)

Query: 70  MASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAASSG 129
           MA+RIA R  SRR SSSGKVL EEEKAAEN+YIKK EQEKLEK+ARKGPKPEE P  SSG
Sbjct: 1   MATRIAARYVSRRLSSSGKVLGEEEKAAENIYIKKAEQEKLEKLARKGPKPEEKPVTSSG 60

Query: 130 SGAEAKPTSAAGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKEQVQD 183
                   S   +ST  VSTD++RNYAV+AG    +  LGWYLKSS KK +VQD
Sbjct: 61  ETVTDANPSGPASSTAGVSTDKHRNYAVLAGTAAILGGLGWYLKSSSKKPEVQD 114

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725021|ref|NP_001236566.1| uncharacterized protein LOC100500340 [Glycine max] gi|255630077|gb|ACU15392.1| unknown [Glycine max]

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/118 (62%), Positives = 91/118 (77%), Gaps = 7/118 (5%)

Query: 70  MASRIAVRNFSRRF--SSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAAS 127
           MA+R+A R  SRR   S SGK+LSEEEKAAEN Y KK EQEKLEK+ARKGP+PE   A S
Sbjct: 1   MAARVAARYGSRRLFSSGSGKILSEEEKAAENAYFKKAEQEKLEKLARKGPQPE---AGS 57

Query: 128 SGSGAEAKPTSA--AGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKEQVQD 183
            GS  +AKP+S+  AG + ++VSTD+YRNYAV+AG +T + ALGWYLK + KK +VQD
Sbjct: 58  GGSVTDAKPSSSGHAGTTADRVSTDKYRNYAVVAGTVTILGALGWYLKGAAKKPEVQD 115

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539244|ref|XP_003538109.1| PREDICTED: uncharacterized protein At2g27730, mitochondrial-like [Glycine max]

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/118 (61%), Positives = 89/118 (75%), Gaps = 7/118 (5%)

Query: 70  MASRIAVRNFSRRF--SSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAAS 127
           MA+R+A R  SRR   S SGK+LSEEEKAAEN Y KK EQEKLEK+ARKGP+ E   A S
Sbjct: 1   MAARVAARYGSRRLFSSGSGKILSEEEKAAENAYFKKAEQEKLEKLARKGPQSE---AVS 57

Query: 128 SGSGAEAKPTSAA--GASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKEQVQD 183
            GS  +AKP+S+   G S ++VSTD+YRNYAV+AG +T + ALGWYLK + KK +VQD
Sbjct: 58  GGSVTDAKPSSSGHTGTSVDRVSTDKYRNYAVVAGTVTMLGALGWYLKGTAKKPEVQD 115

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508232|gb|AFK42182.1| unknown [Lotus japonicus]

 Score =  135 bits (339), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 71/116 (61%), Positives = 85/116 (73%), Gaps = 2/116 (1%)

Query: 70  MASRIAVRNFSRR-FSS-SGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAAS 127
           MA+R+A R  SRR FSS SGK+LSEEEKAAEN Y KKVEQEKLEK+AR+GP+PE +  A 
Sbjct: 1   MATRVAARFISRRPFSSGSGKILSEEEKAAENAYFKKVEQEKLEKVARQGPQPEASTGAG 60

Query: 128 SGSGAEAKPTSAAGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKEQVQD 183
           SG       ++  G S   VSTD++RNYAVIAG IT +  LGWYLK + KK +VQD
Sbjct: 61  SGGSVTGGASAHTGTSAGNVSTDKFRNYAVIAGTITILGGLGWYLKGTAKKPEVQD 116

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565661|ref|XP_002523820.1| conserved hypothetical protein [Ricinus communis] gi|223536908|gb|EEF38546.1| conserved hypothetical protein [Ricinus communis]

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/115 (66%), Positives = 93/115 (80%), Gaps = 4/115 (3%)

Query: 70  MASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAASSG 129
           MA+R+AVR  SRRFSS GK+LSEEEKAAEN+YIKK+EQEKLEK+ARKGPKPEE   A+SG
Sbjct: 1   MATRMAVRFVSRRFSSGGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEK--ATSG 58

Query: 130 SGAEAKPTSAAGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSRKK-EQVQD 183
              + KP+++A +ST   STD+YRNYAV+AG +T   ALGWYL S  KK E+VQD
Sbjct: 59  PATDVKPSASA-SSTSGASTDKYRNYAVVAGTVTVFGALGWYLNSRGKKTEEVQD 112

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519545|gb|AFK47834.1| unknown [Medicago truncatula]

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/119 (61%), Positives = 89/119 (74%), Gaps = 5/119 (4%)

Query: 70  MASRIAVRNFSRRF--SSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAA- 126
           MA+R+A R  SRR   S SGKVL EEEKA EN Y KK EQEKLEK+ARKGP+PE TPAA 
Sbjct: 1   MATRVAARFASRRLFSSGSGKVLGEEEKAVENAYFKKAEQEKLEKLARKGPQPEATPAAG 60

Query: 127 SSGSGAEAKPTSAAGASTE--KVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKEQVQD 183
           S GS  +AKP+++  + T   KVS+D+YRNY V+AG IT  +ALGWYLK + KK +VQ+
Sbjct: 61  SGGSVTDAKPSASGHSDTSGPKVSSDKYRNYGVVAGTITIFAALGWYLKGTAKKPEVQE 119

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443452|ref|XP_004139491.1| PREDICTED: uncharacterized protein At2g27730, mitochondrial-like [Cucumis sativus] gi|449492778|ref|XP_004159098.1| PREDICTED: uncharacterized protein At2g27730, mitochondrial-like [Cucumis sativus]

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/117 (59%), Positives = 90/117 (76%), Gaps = 2/117 (1%)

Query: 69  IMASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEET--PAA 126
           + A+R A R FSRRFSS GK+LSEEEKAAEN+YIKK EQEKLEK+ARKGPKPEE    + 
Sbjct: 1   MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESV 60

Query: 127 SSGSGAEAKPTSAAGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKEQVQD 183
           +    + +  +++  +STEK+STD+ RNYAV+AG +T + ALGWYLKS +K E+V D
Sbjct: 61  ADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 117

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242058957|ref|XP_002458624.1| hypothetical protein SORBIDRAFT_03g036890 [Sorghum bicolor] gi|241930599|gb|EES03744.1| hypothetical protein SORBIDRAFT_03g036890 [Sorghum bicolor]

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 85/121 (70%), Gaps = 10/121 (8%)

Query: 70  MASRIAVRNFSRRF-SSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAASS 128
           MA+R A R   RR  SS GKVLSEEEKAAENVYIKK+EQEKLEK+ARKGP   +  ++++
Sbjct: 1   MATRAAARFLQRRLLSSGGKVLSEEEKAAENVYIKKMEQEKLEKLARKGPSSGQQASSTT 60

Query: 129 GSGAE-----AKPTSAAGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSS-RKKEQVQ 182
           GS A      A PT +A AS   VS+D+ RNYAV+AG +  +S LGWYL S  +K E+V 
Sbjct: 61  GSAANDVKVGAGPTESASAS---VSSDKNRNYAVLAGTVAALSGLGWYLLSKPKKSEEVV 117

Query: 183 D 183
           D
Sbjct: 118 D 118

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
TAIR|locus:2042001	113	AT2G27730 "AT2G27730" [Arabido	0.612	0.991	0.565	5.2e-26
TAIR|locus:2175468	94	AT5G04750 [Arabidopsis thalian	0.371	0.723	0.394	6.6e-06
DICTYBASE|DDB_G0291988	105	if1 [Dictyostelium discoideum	0.387	0.676	0.346	0.00039

TAIR|locus:2042001 AT2G27730 "AT2G27730" [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 65/115 (56%), Positives = 86/115 (74%)

Query:    70 MASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAASSG 129
             MA+R A+R  SRRFSS GKVLSEEE+AAENV+IKK+EQEKL+K+AR+GP  +   +AS  
Sbjct:     1 MATRNALRIVSRRFSS-GKVLSEEERAAENVFIKKMEQEKLQKLARQGPGEQAAGSASEA 59

Query:   130 SGAEAKPTSAAGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKE-QVQD 183
               A A   SA+  S  KVS D+ RNYAV+AG++  V ++GWYLK+  KK+ +VQ+
Sbjct:    60 KVAGAT-ASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPEVQE 113

GO:0005739 "mitochondrion" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009853 "photorespiration" evidence=RCA;TAS

GO:0031966 "mitochondrial membrane" evidence=IDA

GO:0045271 "respiratory chain complex I" evidence=IDA

GO:0005747 "mitochondrial respiratory chain complex I" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA

GO:0051788 "response to misfolded protein" evidence=RCA

GO:0080129 "proteasome core complex assembly" evidence=RCA

TAIR|locus:2175468 AT5G04750 [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 30/76 (39%), Positives = 46/76 (60%)

Query:    62 QKGFMTTIMASR-IAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKP 120
             Q G   +++++R  A+R FS      G+VLSEEE+A E++YI+K+E+E+LEK  +K  K 
Sbjct:    21 QIGASRSVVSTRGPAIRYFS---DDKGRVLSEEERAKESMYIQKMERERLEK--KK--KL 73

Query:   121 EETPAASSGSGAEAKP 136
             E+         A  KP
Sbjct:    74 EQDKLDGEKGSANKKP 89

GO:0005739 "mitochondrion" evidence=ISM

GO:0009507 "chloroplast" evidence=ISM

GO:0042030 "ATPase inhibitor activity" evidence=ISS

DICTYBASE|DDB_G0291988 if1 [Dictyostelium discoideum (taxid:44689)]

 Score = 90 (36.7 bits), Expect = 0.00039, P = 0.00039
 Identities = 27/78 (34%), Positives = 42/78 (53%)

Query:    71 ASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAASSGS 130
             AS IA    S  F   G    E E+A E+ Y+K+ E++ L++MA K  K EET  A    
Sbjct:    14 ASMIAAPKRSIAFR--GDEFKEREEAFESQYVKQKERDDLKRMAEK-KKQEETKKA---- 66

Query:   131 GAEAKPTSAAGASTEKVS 148
             G++  P +++ A+  K +
Sbjct:    67 GSQPTPNASSSANNSKAA 84


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.127   0.356    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      183       183   0.00076  110 3  11 23  0.50    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  573 (61 KB)
  Total size of DFA:  137 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.84u 0.09s 26.93t   Elapsed:  00:00:01
  Total cpu time:  26.84u 0.09s 26.93t   Elapsed:  00:00:01
  Start:  Fri May 10 07:38:29 2013   End:  Fri May 10 07:38:30 2013

GO:0045980 "negative regulation of nucleotide metabolic process" evidence=IEA

GO:0043086 "negative regulation of catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004857 "enzyme inhibitor activity" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_IX0316 hypothetical protein (124 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	183
PF04568	100	IATP: Mitochondrial ATPase inhibitor, IATP; InterP	98.44

>PF04568 IATP: Mitochondrial ATPase inhibitor, IATP; InterPro: IPR007648 ATP synthase inhibitor prevents the enzyme from switching to ATP hydrolysis during collapse of the electrochemical gradient, for example during oxygen deprivation [] ATP synthase inhibitor forms a one to one complex with the F1 ATPase, possibly by binding at the alpha-beta interface

Probab=98.44  E-value=1.3e-07  Score=71.83  Aligned_cols=34  Identities=32%  Similarity=0.519  Sum_probs=31.5

Q ss_pred             CCcccCHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 044735           86 SGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPK  119 (183)
Q Consensus        86 gGkvlsEeErAaENvYIkK~E~EkLEKl~rk~~k  119 (183)
                      .|+.|++.|+|.||.||+++|+|+|++|+++..+
T Consensus        50 ag~~f~krE~A~E~~Y~r~~EkEqL~~Lk~kl~~   83 (100)
T PF04568_consen   50 AGGAFGKREAAQEEQYFRKKEKEQLKKLKEKLKE   83 (100)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCccchHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999988765

It is thought to inhibit ATP synthesis by preventing the release of ATP []. The minimum inhibitory region for bovine inhibitor (P01096 from SWISSPROT) is from residues 39 to 72 []. The inhibitor has two oligomeric states, dimer (the active state) and tetramer. At low pH , the inhibitor forms a dimer via antiparallel coiled coil interactions between the C-terminal regions of two monomers. At high pH, the inhibitor forms tetramers and higher oligomers by coiled coil interactions involving the N terminus and inhibitory region, thus preventing the inhibitory activity []. ; GO: 0004857 enzyme inhibitor activity, 0045980 negative regulation of nucleotide metabolic process, 0005739 mitochondrion; PDB: 1GMJ_B 1OHH_H 1HF9_B 2V7Q_J.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	183
2v7q_J	66	ATPase inhibitor; ION transport, mitochondrion, tr	97.66
1gmj_A	84	ATPase inhibitor; coiled-coil structure, P depende	96.84

>2v7q_J ATPase inhibitor; ION transport, mitochondrion, transit peptide, inhibitor Pro hydrolase; HET: ATP ADP; 2.1A {Bos taurus} SCOP: h.4.8.1

Probab=97.66  E-value=2.4e-05  Score=55.72  Aligned_cols=36  Identities=19%  Similarity=0.376  Sum_probs=30.7

Q ss_pred             CcccCHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCC
Q 044735           87 GKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEE  122 (183)
Q Consensus        87 GkvlsEeErAaENvYIkK~E~EkLEKl~rk~~k~~e  122 (183)
                      |..|+..|+|.|+.||++.|+|+|++|+++..++.+
T Consensus        19 GgaFGKrEaA~Ee~Yfrk~ekEQL~~LKkkl~eq~~   54 (66)
T 2v7q_J           19 GGAFGKREQAEEERYFRARAKEQLAALKKHHENEIS   54 (66)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred             cCcccchHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999876543

>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A

Probab=96.84  E-value=0.00046  Score=50.83  Aligned_cols=31  Identities=23%  Similarity=0.469  Sum_probs=29.0

Q ss_pred             CcccCHHHHhhhhhhHHHHHHHHHHHHHhcC
Q 044735           87 GKVLSEEEKAAENVYIKKVEQEKLEKMARKG  117 (183)
Q Consensus        87 GkvlsEeErAaENvYIkK~E~EkLEKl~rk~  117 (183)
                      |..|+..|+|.|+.||++.|+|+|++|+++.
T Consensus        19 ggaFgKrEaA~Ee~YfrqkekEqL~~LKkkl   49 (84)
T 1gmj_A           19 GGAFGKREQAEEERYFRARAKEQLAALKKHK   49 (84)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcccHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            7889999999999999999999999999764

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00