Citrus Sinensis ID: 045143
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 267 | ||||||
| 224124046 | 582 | predicted protein [Populus trichocarpa] | 0.940 | 0.431 | 0.429 | 3e-47 | |
| 118481218 | 592 | unknown [Populus trichocarpa] | 0.940 | 0.423 | 0.429 | 4e-47 | |
| 255540951 | 590 | calmodulin binding protein, putative [Ri | 0.853 | 0.386 | 0.491 | 1e-46 | |
| 225456707 | 573 | PREDICTED: protein IQ-DOMAIN 31-like [Vi | 0.936 | 0.436 | 0.432 | 6e-45 | |
| 224121528 | 359 | predicted protein [Populus trichocarpa] | 0.850 | 0.632 | 0.475 | 5e-38 | |
| 356512359 | 586 | PREDICTED: protein IQ-DOMAIN 31-like [Gl | 0.842 | 0.383 | 0.424 | 1e-37 | |
| 356562818 | 587 | PREDICTED: protein IQ-DOMAIN 31-like [Gl | 0.842 | 0.383 | 0.428 | 7e-37 | |
| 449520463 | 599 | PREDICTED: protein IQ-DOMAIN 31-like [Cu | 0.808 | 0.360 | 0.439 | 1e-35 | |
| 449469462 | 599 | PREDICTED: protein IQ-DOMAIN 31-like [Cu | 0.808 | 0.360 | 0.435 | 4e-35 | |
| 7208782 | 314 | hypothetical protein [Cicer arietinum] | 0.857 | 0.729 | 0.367 | 2e-31 |
| >gi|224124046|ref|XP_002330091.1| predicted protein [Populus trichocarpa] gi|222871225|gb|EEF08356.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 138/321 (42%), Positives = 172/321 (53%), Gaps = 70/321 (21%)
Query: 6 FLASSPIVLSLQLQYDSVEPNSVS------------------------------------ 29
LASSP V+ LQL YDSVEPNSV+
Sbjct: 214 LLASSPTVMPLQLPYDSVEPNSVANWLECWTASRFWKPVPQAKKIPYSKTQRKHSNGQIV 273
Query: 30 -----------------NTDSITVHSTPKFERSKRSLKKALSHPADPVDENPQSELEKVK 72
N DS +V +T +FE+ KR+ +K SHPAD V E+PQ ELEKVK
Sbjct: 274 EAETGRPKRSVRRVPAANLDSTSVQATSEFEKPKRNQRKVSSHPADSVQESPQIELEKVK 333
Query: 73 RSLRKVNNHLVENSAFVQSEFEIEKKNHSLDKLPTSSVCHEGLERSLRNSGEKMKKKTTL 132
R+LRKVNN +VENSA SE EIEK +L+K+ +S L S NS EKMKK+TT+
Sbjct: 334 RNLRKVNNLVVENSA--HSEVEIEKPKQTLEKVSGTS-GDNVLGWSSSNSAEKMKKETTM 390
Query: 133 K--------------QSKLPKVEATPDLVEMNEMSDVPPSDLAVDESKPWMKSGAKDETI 178
S LP E + +E + + D AV ESK + +G K E
Sbjct: 391 TTPNVLDVAKNEPNLMSTLPDAETAEEPLETIKALESSHEDQAVVESKASVDTGGKGENT 450
Query: 179 PMTNGNFEPKEDSTNNENNKSSRKVVVLTKKKCAENELQSSPSLPSYIAATESAKGKLRL 238
P NG + K+D T NEN+K+++K V K + AEN +QSSPSLPSY+AATESAK KLR
Sbjct: 451 PQLNGQSKHKDDPTINENHKTAKKASVAVKPERAENGIQSSPSLPSYMAATESAKAKLRA 510
Query: 239 QGSSRSSEDGVEKNSGTGCHS 259
QGS R S+DGVEKN+ T HS
Sbjct: 511 QGSPRFSQDGVEKNNVTRRHS 531
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118481218|gb|ABK92559.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255540951|ref|XP_002511540.1| calmodulin binding protein, putative [Ricinus communis] gi|223550655|gb|EEF52142.1| calmodulin binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|225456707|ref|XP_002274035.1| PREDICTED: protein IQ-DOMAIN 31-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224121528|ref|XP_002318607.1| predicted protein [Populus trichocarpa] gi|222859280|gb|EEE96827.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356512359|ref|XP_003524887.1| PREDICTED: protein IQ-DOMAIN 31-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356562818|ref|XP_003549665.1| PREDICTED: protein IQ-DOMAIN 31-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449520463|ref|XP_004167253.1| PREDICTED: protein IQ-DOMAIN 31-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449469462|ref|XP_004152439.1| PREDICTED: protein IQ-DOMAIN 31-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|7208782|emb|CAB76913.1| hypothetical protein [Cicer arietinum] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 267 | ||||||
| TAIR|locus:2019205 | 587 | IQD31 "AT1G74690" [Arabidopsis | 0.876 | 0.398 | 0.375 | 4e-27 | |
| TAIR|locus:2034929 | 572 | IQD30 "AT1G18840" [Arabidopsis | 0.872 | 0.407 | 0.337 | 2.6e-19 | |
| TAIR|locus:2058862 | 636 | IQD29 "AT2G02790" [Arabidopsis | 0.423 | 0.177 | 0.314 | 8e-07 |
| TAIR|locus:2019205 IQD31 "AT1G74690" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 311 (114.5 bits), Expect = 4.0e-27, P = 4.0e-27
Identities = 96/256 (37%), Positives = 134/256 (52%)
Query: 22 SVEPNSVSNTDSITVHSTPKFERSKRSLKKALSHPADP-VDENPQSELEKVKRSLRKVNN 80
SV SN +S +V ++ +FE+ KRS +K S +P E+PQ ELEKVKRSLRKV+N
Sbjct: 285 SVRKVPASNFESSSVQTSFEFEKPKRSFRKVSSQSIEPPAVEDPQIELEKVKRSLRKVHN 344
Query: 81 HLVENSAFVQSE--FEIEKKNHSLDKLPTSS--VCHEGLERSLRNSGEXXXXXXXXX--- 133
+VE+S Q E+EK ++K SS + HE E + E
Sbjct: 345 PVVESSIQPQRSPRKEVEKPKLGVEKTRESSYPLVHETAEEPVNVCDEKKKQEISEQPEE 404
Query: 134 XXXXXXVEA-TPDLVEMNEMSD------VPPSDLAVDESKPWMKSGAKDETIPMTNGNFE 186
+E TP +E NE D + ++ A+ E KP M+ K+E P N
Sbjct: 405 EVHALEMEVHTPGPLETNEALDSSLVNQIDSNEKAMVEEKPSMEKDTKEEKTPKPNN--- 461
Query: 187 PKEDSTNNENNKSSRKVVVLTKKKCAENE--LQSSPSLPSYIAATESAKGKLRLQGSSRS 244
KE+S EN KS +K +K + E+ ++SPS+PSY+ AT+SAK KLRLQGS +S
Sbjct: 462 -KENSAGKENQKSRKKGSATSKTEREESNGHHETSPSIPSYMQATKSAKAKLRLQGSPKS 520
Query: 245 SE-DGVEKNSGTGCHS 259
+E DG EK + HS
Sbjct: 521 AEQDGTEKATVPRRHS 536
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| TAIR|locus:2034929 IQD30 "AT1G18840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2058862 IQD29 "AT2G02790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 267 | |||
| pfam13178 | 105 | pfam13178, DUF4005, Protein of unknown function (D | 1e-05 |
| >gnl|CDD|221960 pfam13178, DUF4005, Protein of unknown function (DUF4005) | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 1e-05
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 194 NENNKSSRKVVVLTKKKCAENELQSSPSLPSYIAATESAKGKLRLQGSSRS 244
+ + S TK + +N SSPSLP+Y+AATESAK K+R Q + R
Sbjct: 9 SSSKSSRSSPSNPTKSERDDNSSTSSPSLPNYMAATESAKAKVRSQSAPRQ 59
|
This is a C-terminal region of plant IQ-containing putative calmodulin-binding proteins. Length = 105 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 267 | |||
| PF13178 | 102 | DUF4005: Protein of unknown function (DUF4005) | 99.5 |
| >PF13178 DUF4005: Protein of unknown function (DUF4005) | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.2e-14 Score=115.16 Aligned_cols=43 Identities=47% Similarity=0.408 Sum_probs=38.3
Q ss_pred CchhhhhcccccchhcccCCCCCCCCcc---CCCCCCccccCCCCC
Q 045143 222 LPSYIAATESAKGKLRLQGSSRSSEDGV---EKNSGTGCHSRFFSP 264 (267)
Q Consensus 222 ~PsyMa~T~Sakak~r~~~spr~~~~~~---e~~~~~rR~Slp~~~ 264 (267)
+|+|||+|||||||+|+|++||+++++. ++....+|+|||...
T Consensus 34 ~PsYMa~TeSakAK~RsqSaPrqR~~~~~~~~~~~~~kR~S~~~~~ 79 (102)
T PF13178_consen 34 LPSYMAATESAKAKARSQSAPRQRPGTPERAEKQSSKKRLSLPGSS 79 (102)
T ss_pred CCCccchhhhhhhhhhccCCcccCCCccccccccccccccccCCCC
Confidence 9999999999999999999999999874 456678999999654
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00