Citrus Sinensis ID: 045471

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-----
Protein Sequence
MKAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALLTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSRR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MKAGAVEIgeaknstptygvnkgISILDFVLRLLAFAGALGSaiamgttnetlpFFSQLIRFRaeyddlpsftfFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALLTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSRR
Flexible Loop (DISEMBL)
mkagaveigeaknstptygvnKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALLTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSRR
Low Complexity Region (SEG)
MKAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGYlilslslsiFHIVRSRAQKSRILLVFFDTamlalltgsasaaaaivylaHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSRR
Disordered region (IsUnstruct)
****************TYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALLTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVAL***
Disordered Region (DISOPRED)
*************************ILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALLTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSR*
Disordered Region (DISEMBL)
MKAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALLTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSRR
Disordered Region (DISPRO)
******************GVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALLTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSR*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALLTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSRR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	185	2.2.26 [Sep-21-2011]
P0DI44	188	Casparian strip membrane	N/A	no	0.994	0.978	0.675	2e-70
B9T4E6	186	CASP-like protein RCOM_02	N/A	no	1.0	0.994	0.735	3e-69
B9I534	186	Casparian strip membrane	yes	no	1.0	0.994	0.708	9e-69
C6T1G0	186	CASP-like protein 1 OS=Gl	yes	no	1.0	0.994	0.645	6e-67
Q67X40	184	Casparian strip membrane	yes	no	0.983	0.989	0.664	4e-65
A2YAZ1	184	Casparian strip membrane	N/A	no	0.983	0.989	0.664	4e-65
A7PMY7	186	Casparian strip membrane	yes	no	0.902	0.897	0.767	6e-63
P0DI34	192	Casparian strip membrane	N/A	no	0.994	0.958	0.645	2e-60
G7L218	186	CASP-like protein MTR_7g0	N/A	no	0.994	0.989	0.625	2e-60
B6T959	187	Casparian strip membrane	N/A	no	0.875	0.866	0.666	9e-60

>sp|P0DI44|CASP_SOLTU Casparian strip membrane protein 1 OS=Solanum tuberosum PE=2 SV=1

 Score =  265 bits (676), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 125/185 (67%), Positives = 153/185 (82%), Gaps = 1/185 (0%)

Query: 1   MKAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLI 60
           MKAGA+E+G A  +T + GVN+G+SILD  +R++A    LGSAIAMGTTNETLPFF+Q +
Sbjct: 1   MKAGALELGHASKTTKS-GVNRGMSILDLFIRIIAIIATLGSAIAMGTTNETLPFFTQFV 59

Query: 61  RFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALL 120
           RF+A+Y DLP+FTFFV ANA+VS YL+LSL LSI+HI+RSRAQ +RI L+FFD AML LL
Sbjct: 60  RFKAKYSDLPTFTFFVVANAIVSAYLVLSLGLSIYHIMRSRAQATRIALIFFDAAMLGLL 119

Query: 121 TGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGV 180
           TG ASA+AAIVYLAHKGN K NWF ICQQ++SFC R SGSL+GSF G  L+IL+I L  +
Sbjct: 120 TGGASASAAIVYLAHKGNRKTNWFPICQQYDSFCHRTSGSLVGSFAGSVLIILLIFLSAI 179

Query: 181 ALSRR 185
           ALSR+
Sbjct: 180 ALSRQ 184

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.
Solanum tuberosum (taxid: 4113)

>sp|B9T4E6|CSPL3_RICCO CASP-like protein RCOM_0299440 OS=Ricinus communis GN=RCOM_0299440 PE=3 SV=1

 Score =  260 bits (665), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 136/185 (73%), Positives = 157/185 (84%)

Query: 1   MKAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLI 60
           MK  A+E+G AK+STP  G N+G+SILDF+LRL+A  G L SAI MGTTNETLPF +Q I
Sbjct: 1   MKTDAIELGVAKDSTPIGGANRGVSILDFILRLVALVGTLASAILMGTTNETLPFATQFI 60

Query: 61  RFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALL 120
           RFRAEYDDLP+FTFFV AN VVSGYL+LSL LSI +IVRS A+  RI+L+ FDTAMLALL
Sbjct: 61  RFRAEYDDLPTFTFFVVANIVVSGYLLLSLPLSIVNIVRSTAKNRRIILIIFDTAMLALL 120

Query: 121 TGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGV 180
           T  ASAAAAIVYLAHKGN +ANWFAICQQFNSFC+RISGSLIGSFVG+A+ IL+I++   
Sbjct: 121 TAGASAAAAIVYLAHKGNTRANWFAICQQFNSFCERISGSLIGSFVGVAVFILLILMSAS 180

Query: 181 ALSRR 185
           ALSRR
Sbjct: 181 ALSRR 185

Ricinus communis (taxid: 3988)

>sp|B9I534|CASP1_POPTR Casparian strip membrane protein POPTRDRAFT_569472 OS=Populus trichocarpa GN=POPTRDRAFT_569472 PE=3 SV=1

 Score =  259 bits (661), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 131/185 (70%), Positives = 154/185 (83%)

Query: 1   MKAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLI 60
           MKAG +E+GE K+S P   VN+G++ILDF+LR+LAF G LGSAI+M TTNETLPFF+Q I
Sbjct: 1   MKAGPIELGEGKSSAPKAAVNRGVAILDFILRILAFIGTLGSAISMATTNETLPFFTQFI 60

Query: 61  RFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALL 120
           RFRAEYDDLP+FTFFV AN VVS YL+ SL  SIF+IVRS+AQ SRILL+  DTAML LL
Sbjct: 61  RFRAEYDDLPTFTFFVVANGVVSAYLLFSLPFSIFNIVRSKAQNSRILLIILDTAMLGLL 120

Query: 121 TGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGV 180
           +  ASAAAAIVYLAH+GN + NW AICQQFNSFC+RISGSLIGSF+G+ + IL+I L  V
Sbjct: 121 SAGASAAAAIVYLAHQGNVRTNWSAICQQFNSFCERISGSLIGSFIGVVVFILLISLSAV 180

Query: 181 ALSRR 185
           ALSR 
Sbjct: 181 ALSRH 185

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

Populus trichocarpa (taxid: 3694)

>sp|C6T1G0|CSPL1_SOYBN CASP-like protein 1 OS=Glycine max PE=2 SV=1

 Score =  253 bits (645), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 120/186 (64%), Positives = 153/186 (82%), Gaps = 1/186 (0%)

Query: 1   MKAGAVEIGE-AKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQL 59
           MK G++E GE +K+++P  GV +G+SI+DF+LR++A    LGSA+AMGTTNETLPF +Q 
Sbjct: 1   MKGGSIEAGEVSKDASPRKGVARGLSIMDFILRIIAAVATLGSALAMGTTNETLPFATQF 60

Query: 60  IRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLAL 119
           I+FRAE+DDLPS  FFV ANAVV GYL+LSL +S+FHI+RS   KSRILLV  DT ML+L
Sbjct: 61  IKFRAEFDDLPSLVFFVMANAVVCGYLVLSLMISVFHILRSTPVKSRILLVALDTVMLSL 120

Query: 120 LTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCG 179
           +T SASAA +IVY+AH GN  ANWFAICQQ+N+FC+RISGSLIGS++ +AL I++IML  
Sbjct: 121 VTASASAATSIVYIAHNGNTGANWFAICQQYNNFCERISGSLIGSYIAVALFIILIMLSL 180

Query: 180 VALSRR 185
           VA+SR 
Sbjct: 181 VAISRN 186

Glycine max (taxid: 3847)

>sp|Q67X40|CASP3_ORYSJ Casparian strip membrane protein Os06g0231050 OS=Oryza sativa subsp. japonica GN=Os06g0231050 PE=2 SV=1

 Score =  247 bits (630), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 121/182 (66%), Positives = 150/182 (82%)

Query: 4   GAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFR 63
           G+ E GE   +  + GV+KG+SILD +LR +A  G L SAIAMGTTN+TLPFF+Q IRF+
Sbjct: 3   GSEEHGETSKAPLSRGVSKGVSILDVILRFVAIIGTLASAIAMGTTNQTLPFFTQFIRFK 62

Query: 64  AEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALLTGS 123
           A+Y DLP+ TFFV AN++VS YLILSL LSI H++RSRA+ SR++L+FFD AMLAL+T  
Sbjct: 63  AQYSDLPTLTFFVVANSIVSAYLILSLPLSIVHVIRSRAKYSRLILIFFDAAMLALVTAG 122

Query: 124 ASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALS 183
           ASAAAAIVYLAHKGNA+ANW AICQQF+SFC+RISGSLIGSF  M +L+L+I L  +AL+
Sbjct: 123 ASAAAAIVYLAHKGNARANWLAICQQFDSFCERISGSLIGSFAAMVVLVLLIFLSAIALA 182

Query: 184 RR 185
           RR
Sbjct: 183 RR 184

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YAZ1|CASP3_ORYSI Casparian strip membrane protein OsI_22263 OS=Oryza sativa subsp. indica GN=OsI_22263 PE=2 SV=1

 Score =  247 bits (630), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 121/182 (66%), Positives = 150/182 (82%)

Query: 4   GAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFR 63
           G+ E GE   +  + GV+KG+SILD +LR +A  G L SAIAMGTTN+TLPFF+Q IRF+
Sbjct: 3   GSEEHGETSKAPLSRGVSKGVSILDVILRFVAIIGTLASAIAMGTTNQTLPFFTQFIRFK 62

Query: 64  AEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALLTGS 123
           A+Y DLP+ TFFV AN++VS YLILSL LSI H++RSRA+ SR++L+FFD AMLAL+T  
Sbjct: 63  AQYSDLPTLTFFVVANSIVSAYLILSLPLSIVHVIRSRAKYSRLILIFFDAAMLALVTAG 122

Query: 124 ASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALS 183
           ASAAAAIVYLAHKGNA+ANW AICQQF+SFC+RISGSLIGSF  M +L+L+I L  +AL+
Sbjct: 123 ASAAAAIVYLAHKGNARANWLAICQQFDSFCERISGSLIGSFAAMVVLVLLIFLSAIALA 182

Query: 184 RR 185
           RR
Sbjct: 183 RR 184

Regulates membrane-cell wall junctions and localised cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

Oryza sativa subsp. indica (taxid: 39946)

>sp|A7PMY7|CASP3_VITVI Casparian strip membrane protein VIT_14s0108g01050 OS=Vitis vinifera GN=VIT_14s0108g01050 PE=3 SV=1

 Score =  239 bits (611), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 129/168 (76%), Positives = 149/168 (88%), Gaps = 1/168 (0%)

Query: 1   MKAGAVEIGE-AKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQL 59
           MKAGA+E+GE +K S P  GVN+GISILDF+LRL+   G LGSAIAMGTTNETLPFF+Q 
Sbjct: 1   MKAGALELGEGSKTSIPRGGVNRGISILDFILRLITIIGTLGSAIAMGTTNETLPFFTQF 60

Query: 60  IRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLAL 119
            +FRAEYDDLP+FTFFV AN++VSGYL+LSL +SI HIVRS A+ SRI+L+FFDTAMLAL
Sbjct: 61  TQFRAEYDDLPTFTFFVIANSIVSGYLVLSLPMSILHIVRSGARASRIVLIFFDTAMLAL 120

Query: 120 LTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVG 167
           LT +ASAA+AIVYLAHKGNA+ANWFAICQQF SFC+RISGSLIGSF G
Sbjct: 121 LTAAASAASAIVYLAHKGNAQANWFAICQQFKSFCERISGSLIGSFGG 168

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

Vitis vinifera (taxid: 29760)

>sp|P0DI34|CASP2_PANVG Casparian strip membrane protein 2 OS=Panicum virgatum PE=2 SV=1

 Score =  231 bits (589), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 122/189 (64%), Positives = 142/189 (75%), Gaps = 5/189 (2%)

Query: 2   KAGAVEIGEAKNST-----PTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFF 56
           K   VE GE+  +         GV +  S+ D  LR LA  G + SAI+MGTTNETLPFF
Sbjct: 3   KDVVVEHGESSKAPLVAAPAASGVGRAASVADVFLRFLAIVGTIASAISMGTTNETLPFF 62

Query: 57  SQLIRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAM 116
           +Q I+F A+Y DLPSFTFFVAANAVV  YL+LS+ LSI HIVR RA+ SR++LVFFD AM
Sbjct: 63  TQFIQFEAKYSDLPSFTFFVAANAVVCTYLVLSIPLSIVHIVRPRARYSRLVLVFFDAAM 122

Query: 117 LALLTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIM 176
           L LLT  ASAAAAIVYLAHKGN +ANWFAICQQF+SFC+RISGSLIGSF  M LLI++I 
Sbjct: 123 LTLLTAGASAAAAIVYLAHKGNVRANWFAICQQFDSFCERISGSLIGSFAAMVLLIMLIF 182

Query: 177 LCGVALSRR 185
           L   AL+RR
Sbjct: 183 LSAFALARR 191

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

Panicum virgatum (taxid: 38727)

>sp|G7L218|CSPL3_MEDTR CASP-like protein MTR_7g011090 OS=Medicago truncatula GN=MTR_7g011090 PE=3 SV=1

 Score =  231 bits (589), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 115/184 (62%), Positives = 144/184 (78%)

Query: 2   KAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIR 61
           K+  VE+GE K S     + +G+SILDF+LRL+A    L SAIAMGTT+E+LPFF+Q +R
Sbjct: 3   KSTYVELGEEKTSNQKGNMKRGVSILDFILRLIAIVATLASAIAMGTTDESLPFFTQFVR 62

Query: 62  FRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALLT 121
           FRA YDDLP+  FFV A+A+VSGYLILSL LSI HI+RS A  +R++ +  DT ML LLT
Sbjct: 63  FRANYDDLPTLRFFVVASAIVSGYLILSLPLSILHIIRSSAGMTRVIFIILDTVMLGLLT 122

Query: 122 GSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVA 181
             +SAAA+IVYLAHKGN KANWFA CQQ+NSFC+RISGSLIGSF+ + L I++I+L  + 
Sbjct: 123 AGSSAAASIVYLAHKGNRKANWFAFCQQYNSFCERISGSLIGSFIAIPLFIMLILLSALV 182

Query: 182 LSRR 185
           LSRR
Sbjct: 183 LSRR 186

Medicago truncatula (taxid: 3880)

>sp|B6T959|CASP1_MAIZE Casparian strip membrane protein 1 OS=Zea mays PE=2 SV=1

 Score =  229 bits (584), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 110/165 (66%), Positives = 130/165 (78%), Gaps = 3/165 (1%)

Query: 4   GAVEIGEAKNSTP---TYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLI 60
           G+ E GE     P   + GV+KG+S+LD +LR +A  G L SAIAMGTTNETLPFF+Q I
Sbjct: 3   GSSEHGETSKQAPLGSSRGVSKGVSVLDLILRFIAIIGTLASAIAMGTTNETLPFFTQFI 62

Query: 61  RFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALL 120
           RF+A+Y DLP+ TFFV AN++V  YL LSL LSI HI+RSRA+ SR+LLV  D AMLAL+
Sbjct: 63  RFKAQYSDLPTLTFFVVANSIVCAYLTLSLPLSIVHIIRSRAKYSRLLLVVLDAAMLALV 122

Query: 121 TGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSF 165
           T  ASAAAAIVYLAHKGN +ANW AICQQF+SFC+RISG LIGSF
Sbjct: 123 TPGASAAAAIVYLAHKGNVRANWLAICQQFDSFCERISGCLIGSF 167

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

Zea mays (taxid: 4577)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	185
391738036	188	RecName: Full=Casparian strip membrane p	0.994	0.978	0.675	9e-69
255584795	186	conserved hypothetical protein [Ricinus	1.0	0.994	0.735	2e-67
449447379	186	PREDICTED: casparian strip membrane prot	1.0	0.994	0.691	3e-67
224120596	186	predicted protein [Populus trichocarpa]	1.0	0.994	0.708	4e-67
351727415	186	CASP-like protein 1 [Glycine max] gi|288	1.0	0.994	0.645	3e-65
297724625	184	Os06g0231050 [Oryza sativa Japonica Grou	0.983	0.989	0.664	2e-63
225452867	186	PREDICTED: casparian strip membrane prot	0.902	0.897	0.767	3e-61
391738023	192	RecName: Full=Casparian strip membrane p	0.994	0.958	0.645	1e-58
357501949	186	hypothetical protein MTR_7g011090 [Medic	0.994	0.989	0.625	1e-58
388499472	186	unknown [Lotus japonicus]	1.0	0.994	0.602	2e-58

>gi|391738036|sp|P0DI44.1|CASP_SOLTU RecName: Full=Casparian strip membrane protein 1

 Score =  265 bits (676), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 125/185 (67%), Positives = 153/185 (82%), Gaps = 1/185 (0%)

Query: 1   MKAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLI 60
           MKAGA+E+G A  +T + GVN+G+SILD  +R++A    LGSAIAMGTTNETLPFF+Q +
Sbjct: 1   MKAGALELGHASKTTKS-GVNRGMSILDLFIRIIAIIATLGSAIAMGTTNETLPFFTQFV 59

Query: 61  RFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALL 120
           RF+A+Y DLP+FTFFV ANA+VS YL+LSL LSI+HI+RSRAQ +RI L+FFD AML LL
Sbjct: 60  RFKAKYSDLPTFTFFVVANAIVSAYLVLSLGLSIYHIMRSRAQATRIALIFFDAAMLGLL 119

Query: 121 TGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGV 180
           TG ASA+AAIVYLAHKGN K NWF ICQQ++SFC R SGSL+GSF G  L+IL+I L  +
Sbjct: 120 TGGASASAAIVYLAHKGNRKTNWFPICQQYDSFCHRTSGSLVGSFAGSVLIILLIFLSAI 179

Query: 181 ALSRR 185
           ALSR+
Sbjct: 180 ALSRQ 184

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584795|ref|XP_002533115.1| conserved hypothetical protein [Ricinus communis] gi|238055372|sp|B9T4E6.1|CSPL3_RICCO RecName: Full=CASP-like protein RCOM_0299440 gi|223527078|gb|EEF29260.1| conserved hypothetical protein [Ricinus communis]

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 136/185 (73%), Positives = 157/185 (84%)

Query: 1   MKAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLI 60
           MK  A+E+G AK+STP  G N+G+SILDF+LRL+A  G L SAI MGTTNETLPF +Q I
Sbjct: 1   MKTDAIELGVAKDSTPIGGANRGVSILDFILRLVALVGTLASAILMGTTNETLPFATQFI 60

Query: 61  RFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALL 120
           RFRAEYDDLP+FTFFV AN VVSGYL+LSL LSI +IVRS A+  RI+L+ FDTAMLALL
Sbjct: 61  RFRAEYDDLPTFTFFVVANIVVSGYLLLSLPLSIVNIVRSTAKNRRIILIIFDTAMLALL 120

Query: 121 TGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGV 180
           T  ASAAAAIVYLAHKGN +ANWFAICQQFNSFC+RISGSLIGSFVG+A+ IL+I++   
Sbjct: 121 TAGASAAAAIVYLAHKGNTRANWFAICQQFNSFCERISGSLIGSFVGVAVFILLILMSAS 180

Query: 181 ALSRR 185
           ALSRR
Sbjct: 181 ALSRR 185

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447379|ref|XP_004141446.1| PREDICTED: casparian strip membrane protein 1-like [Cucumis sativus] gi|449527611|ref|XP_004170803.1| PREDICTED: casparian strip membrane protein 1-like [Cucumis sativus]

 Score =  259 bits (662), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 128/185 (69%), Positives = 150/185 (81%)

Query: 1   MKAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLI 60
           MKA A +  E K+S    GVN+G+SI DF+LRL A  GALGSAIAMGTT +TLPF +Q I
Sbjct: 1   MKAVASDSSELKSSKLKPGVNRGLSIFDFILRLAAIVGALGSAIAMGTTTQTLPFATQFI 60

Query: 61  RFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALL 120
           +FRAEY+DLP FTFFV A A+VSGYL+LSL LSIFHI+RSRA+ +R++LVF D  M+ALL
Sbjct: 61  QFRAEYNDLPMFTFFVVACAIVSGYLVLSLPLSIFHILRSRARATRVVLVFLDAGMMALL 120

Query: 121 TGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGV 180
           T  ASAAAAIVYLAHKGN K NW AICQQFNSFC+R SGSLIGSFV + LL+++I L G 
Sbjct: 121 TSGASAAAAIVYLAHKGNGKTNWLAICQQFNSFCERTSGSLIGSFVAIVLLMIMIFLSGA 180

Query: 181 ALSRR 185
           ALSRR
Sbjct: 181 ALSRR 185

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120596|ref|XP_002318369.1| predicted protein [Populus trichocarpa] gi|238055373|sp|B9I534.1|CASP1_POPTR RecName: Full=Casparian strip membrane protein POPTRDRAFT_569472 gi|222859042|gb|EEE96589.1| predicted protein [Populus trichocarpa]

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 131/185 (70%), Positives = 154/185 (83%)

Query: 1   MKAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLI 60
           MKAG +E+GE K+S P   VN+G++ILDF+LR+LAF G LGSAI+M TTNETLPFF+Q I
Sbjct: 1   MKAGPIELGEGKSSAPKAAVNRGVAILDFILRILAFIGTLGSAISMATTNETLPFFTQFI 60

Query: 61  RFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALL 120
           RFRAEYDDLP+FTFFV AN VVS YL+ SL  SIF+IVRS+AQ SRILL+  DTAML LL
Sbjct: 61  RFRAEYDDLPTFTFFVVANGVVSAYLLFSLPFSIFNIVRSKAQNSRILLIILDTAMLGLL 120

Query: 121 TGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGV 180
           +  ASAAAAIVYLAH+GN + NW AICQQFNSFC+RISGSLIGSF+G+ + IL+I L  V
Sbjct: 121 SAGASAAAAIVYLAHQGNVRTNWSAICQQFNSFCERISGSLIGSFIGVVVFILLISLSAV 180

Query: 181 ALSRR 185
           ALSR 
Sbjct: 181 ALSRH 185

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727415|ref|NP_001236648.1| CASP-like protein 1 [Glycine max] gi|288559151|sp|C6T1G0.1|CSPL1_SOYBN RecName: Full=CASP-like protein 1 gi|255630091|gb|ACU15399.1| unknown [Glycine max]

 Score =  253 bits (645), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 120/186 (64%), Positives = 153/186 (82%), Gaps = 1/186 (0%)

Query: 1   MKAGAVEIGE-AKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQL 59
           MK G++E GE +K+++P  GV +G+SI+DF+LR++A    LGSA+AMGTTNETLPF +Q 
Sbjct: 1   MKGGSIEAGEVSKDASPRKGVARGLSIMDFILRIIAAVATLGSALAMGTTNETLPFATQF 60

Query: 60  IRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLAL 119
           I+FRAE+DDLPS  FFV ANAVV GYL+LSL +S+FHI+RS   KSRILLV  DT ML+L
Sbjct: 61  IKFRAEFDDLPSLVFFVMANAVVCGYLVLSLMISVFHILRSTPVKSRILLVALDTVMLSL 120

Query: 120 LTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCG 179
           +T SASAA +IVY+AH GN  ANWFAICQQ+N+FC+RISGSLIGS++ +AL I++IML  
Sbjct: 121 VTASASAATSIVYIAHNGNTGANWFAICQQYNNFCERISGSLIGSYIAVALFIILIMLSL 180

Query: 180 VALSRR 185
           VA+SR 
Sbjct: 181 VAISRN 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297724625|ref|NP_001174676.1| Os06g0231050 [Oryza sativa Japonica Group] gi|75116473|sp|Q67X40.1|CASP3_ORYSJ RecName: Full=Casparian strip membrane protein Os06g0231050 gi|342162483|sp|A2YAZ1.1|CASP3_ORYSI RecName: Full=Casparian strip membrane protein OsI_22263 gi|51535409|dbj|BAD37279.1| integral membrane family protein-like [Oryza sativa Japonica Group] gi|125554646|gb|EAZ00252.1| hypothetical protein OsI_22263 [Oryza sativa Indica Group] gi|125596586|gb|EAZ36366.1| hypothetical protein OsJ_20694 [Oryza sativa Japonica Group] gi|255676859|dbj|BAH93404.1| Os06g0231050 [Oryza sativa Japonica Group]

 Score =  247 bits (630), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 121/182 (66%), Positives = 150/182 (82%)

Query: 4   GAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFR 63
           G+ E GE   +  + GV+KG+SILD +LR +A  G L SAIAMGTTN+TLPFF+Q IRF+
Sbjct: 3   GSEEHGETSKAPLSRGVSKGVSILDVILRFVAIIGTLASAIAMGTTNQTLPFFTQFIRFK 62

Query: 64  AEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALLTGS 123
           A+Y DLP+ TFFV AN++VS YLILSL LSI H++RSRA+ SR++L+FFD AMLAL+T  
Sbjct: 63  AQYSDLPTLTFFVVANSIVSAYLILSLPLSIVHVIRSRAKYSRLILIFFDAAMLALVTAG 122

Query: 124 ASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALS 183
           ASAAAAIVYLAHKGNA+ANW AICQQF+SFC+RISGSLIGSF  M +L+L+I L  +AL+
Sbjct: 123 ASAAAAIVYLAHKGNARANWLAICQQFDSFCERISGSLIGSFAAMVVLVLLIFLSAIALA 182

Query: 184 RR 185
           RR
Sbjct: 183 RR 184

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452867|ref|XP_002278569.1| PREDICTED: casparian strip membrane protein VIT_14s0108g01050 [Vitis vinifera] gi|226713606|sp|A7PMY7.1|CASP3_VITVI RecName: Full=Casparian strip membrane protein VIT_14s0108g01050 gi|296082941|emb|CBI22242.3| unnamed protein product [Vitis vinifera]

 Score =  239 bits (611), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 129/168 (76%), Positives = 149/168 (88%), Gaps = 1/168 (0%)

Query: 1   MKAGAVEIGE-AKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQL 59
           MKAGA+E+GE +K S P  GVN+GISILDF+LRL+   G LGSAIAMGTTNETLPFF+Q 
Sbjct: 1   MKAGALELGEGSKTSIPRGGVNRGISILDFILRLITIIGTLGSAIAMGTTNETLPFFTQF 60

Query: 60  IRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLAL 119
            +FRAEYDDLP+FTFFV AN++VSGYL+LSL +SI HIVRS A+ SRI+L+FFDTAMLAL
Sbjct: 61  TQFRAEYDDLPTFTFFVIANSIVSGYLVLSLPMSILHIVRSGARASRIVLIFFDTAMLAL 120

Query: 120 LTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVG 167
           LT +ASAA+AIVYLAHKGNA+ANWFAICQQF SFC+RISGSLIGSF G
Sbjct: 121 LTAAASAASAIVYLAHKGNAQANWFAICQQFKSFCERISGSLIGSFGG 168

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|391738023|sp|P0DI34.1|CASP2_PANVG RecName: Full=Casparian strip membrane protein 2

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 122/189 (64%), Positives = 142/189 (75%), Gaps = 5/189 (2%)

Query: 2   KAGAVEIGEAKNST-----PTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFF 56
           K   VE GE+  +         GV +  S+ D  LR LA  G + SAI+MGTTNETLPFF
Sbjct: 3   KDVVVEHGESSKAPLVAAPAASGVGRAASVADVFLRFLAIVGTIASAISMGTTNETLPFF 62

Query: 57  SQLIRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAM 116
           +Q I+F A+Y DLPSFTFFVAANAVV  YL+LS+ LSI HIVR RA+ SR++LVFFD AM
Sbjct: 63  TQFIQFEAKYSDLPSFTFFVAANAVVCTYLVLSIPLSIVHIVRPRARYSRLVLVFFDAAM 122

Query: 117 LALLTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIM 176
           L LLT  ASAAAAIVYLAHKGN +ANWFAICQQF+SFC+RISGSLIGSF  M LLI++I 
Sbjct: 123 LTLLTAGASAAAAIVYLAHKGNVRANWFAICQQFDSFCERISGSLIGSFAAMVLLIMLIF 182

Query: 177 LCGVALSRR 185
           L   AL+RR
Sbjct: 183 LSAFALARR 191

Source: Panicum virgatum

Species: Panicum virgatum

Genus: Panicum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357501949|ref|XP_003621263.1| hypothetical protein MTR_7g011090 [Medicago truncatula] gi|391358722|sp|G7L218.1|CSPL3_MEDTR RecName: Full=CASP-like protein MTR_7g011090 gi|355496278|gb|AES77481.1| hypothetical protein MTR_7g011090 [Medicago truncatula]

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 115/184 (62%), Positives = 144/184 (78%)

Query: 2   KAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIR 61
           K+  VE+GE K S     + +G+SILDF+LRL+A    L SAIAMGTT+E+LPFF+Q +R
Sbjct: 3   KSTYVELGEEKTSNQKGNMKRGVSILDFILRLIAIVATLASAIAMGTTDESLPFFTQFVR 62

Query: 62  FRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLALLT 121
           FRA YDDLP+  FFV A+A+VSGYLILSL LSI HI+RS A  +R++ +  DT ML LLT
Sbjct: 63  FRANYDDLPTLRFFVVASAIVSGYLILSLPLSILHIIRSSAGMTRVIFIILDTVMLGLLT 122

Query: 122 GSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVA 181
             +SAAA+IVYLAHKGN KANWFA CQQ+NSFC+RISGSLIGSF+ + L I++I+L  + 
Sbjct: 123 AGSSAAASIVYLAHKGNRKANWFAFCQQYNSFCERISGSLIGSFIAIPLFIMLILLSALV 182

Query: 182 LSRR 185
           LSRR
Sbjct: 183 LSRR 186

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499472|gb|AFK37802.1| unknown [Lotus japonicus]

 Score =  230 bits (586), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 112/186 (60%), Positives = 148/186 (79%), Gaps = 1/186 (0%)

Query: 1   MKAGAVEIGE-AKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQL 59
           MK G++EIGE +K ++   G+ +G+SI+DF+LR++A A  LG A+ MGT  E+LPF +  
Sbjct: 1   MKGGSIEIGEVSKGASQRKGMKRGLSIMDFILRIVAAAATLGGAVGMGTAEESLPFVTNF 60

Query: 60  IRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRILLVFFDTAMLAL 119
           ++FRAEYDDLPSF FFV AN++V GYL+LSL LS+FHIVRS A KSR+LL+ FDT ML L
Sbjct: 61  MQFRAEYDDLPSFVFFVLANSLVCGYLVLSLILSVFHIVRSSAVKSRVLLIVFDTVMLGL 120

Query: 120 LTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCG 179
           L   ASAAAAIVYLAH GN+KANWF ICQQFN++CQ+ SGS++GS++ +A LI++I+L  
Sbjct: 121 LIAGASAAAAIVYLAHNGNSKANWFPICQQFNNYCQQASGSVVGSYIAVAFLIILILLSA 180

Query: 180 VALSRR 185
            A+SR 
Sbjct: 181 AAISRH 186

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	185
TAIR|locus:2150986	187	CASP5 "Casparian strip membran	1.0	0.989	0.526	9.8e-48
TAIR|locus:2035791	209	AT1G14160 "AT1G14160" [Arabido	0.989	0.875	0.436	3.9e-37
TAIR|locus:2160747	202	CASP4 "AT5G06200" [Arabidopsis	0.994	0.910	0.402	9.2e-36
TAIR|locus:2080742	204	CASP2 "AT3G11550" [Arabidopsis	0.994	0.901	0.408	3.1e-35
TAIR|locus:2038638	221	CASP3 "AT2G27370" [Arabidopsis	0.897	0.751	0.379	2.3e-30
TAIR|locus:2053514	206	CASP1 "AT2G36100" [Arabidopsis	0.897	0.805	0.379	7.9e-30
TAIR|locus:2128776	164	AT4G03540 "AT4G03540" [Arabido	0.745	0.841	0.346	4.2e-15
TAIR|locus:2020773	164	AT1G03700 "AT1G03700" [Arabido	0.745	0.841	0.333	2.3e-14
UNIPROTKB|A2Y2B7	162	BLE3 "CASP-like protein BLE3"	0.767	0.876	0.298	1e-13
UNIPROTKB|Q84UT5	162	BLE3 "CASP-like protein BLE3"	0.767	0.876	0.298	1e-13

TAIR|locus:2150986 CASP5 "Casparian strip membrane domain protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
 Identities = 98/186 (52%), Positives = 123/186 (66%)

Query:     1 MKAGAVEIGEAKNSTPTYGV-NKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQL 59
             MK+G  EI E        G+ ++ I+IL+F+LR++AF   +GSAI MGTT+ETLPFF+Q 
Sbjct:     1 MKSGQAEIMETSKGIQKSGLMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQF 60

Query:    60 IRFRAEYDDLPSFTFFVAANAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXX 119
             IRF+AEY+DLP+ TFFV ANAVVSGY          HIV+ + Q +RILL+  D      
Sbjct:    61 IRFQAEYNDLPALTFFVVANAVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGL 120

Query:   120 XXXXXXXXXXXXXXXHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCG 179
                            H GN K NWFAICQQFNSFC+RISGSLIGSF+ + LLIL+I+L  
Sbjct:   121 LTSGASSAAAIVYLAHNGNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSA 180

Query:   180 VALSRR 185
             +ALSRR
Sbjct:   181 IALSRR 186

GO:0005739 "mitochondrion" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2035791 AT1G14160 "AT1G14160" [Arabidopsis thaliana (taxid:3702)]

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 83/190 (43%), Positives = 112/190 (58%)

Query:     2 KAGAVEIGEAKNST-------PTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLP 54
             +A  +E GE   S+       P   +NKGIS+L FVLRL A  G +GSA+AMGTT+E++ 
Sbjct:    19 EAKQIEAGETSRSSRKLITFEPKLVINKGISVLGFVLRLFAVFGTIGSALAMGTTHESVV 78

Query:    55 FFSQLIRFRAEYDDLPSFTFFVAANAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDT 114
               SQL+  + +Y DLP+  FFV ANA+  GY         FHI  ++A+ SRI+L+  DT
Sbjct:    79 SLSQLVLLKVKYSDLPTLMFFVVANAISGGYLVLSLPVSIFHIFSTQAKTSRIILLVVDT 138

Query:   115 XXXXXXXXXXXXXXXXXXXXHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILI 174
                                 H+GN  ANW  ICQQF+ FC+RISGSLIGSF  + LL+LI
Sbjct:   139 VMLALVSSGASAATATVYLAHEGNTTANWPPICQQFDGFCERISGSLIGSFCAVILLMLI 198

Query:   175 IMLCGVALSR 184
             ++   ++LSR
Sbjct:   199 VINSAISLSR 208

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2160747 CASP4 "AT5G06200" [Arabidopsis thaliana (taxid:3702)]

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 74/184 (40%), Positives = 105/184 (57%)

Query:     1 MKAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLI 60
             +K  A  +G A++ T + G  +G+SI DF+LRL A   AL +A  MGT++ETLPFF+Q +
Sbjct:    18 IKGKAPLLGLARDHTGSGGYKRGLSIFDFLLRLAAIVAALAAAATMGTSDETLPFFTQFL 77

Query:    61 RFRAEYDDLPSFTFFVAANAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXXX 120
             +F A YDDLP+F FFV A A+V+GY           IVR  A   R+LL+  DT      
Sbjct:    78 QFEASYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTIVRPLAVAPRLLLLVLDTAALALD 137

Query:   121 XXXXXXXXXXXXXXHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGV 180
                           H GN   NW  ICQQF  FCQ+ SG+++ +F  +  L +++++ GV
Sbjct:   138 TAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAVVSAFASVTFLAILVVISGV 197

Query:   181 ALSR 184
             +L R
Sbjct:   198 SLKR 201

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2080742 CASP2 "AT3G11550" [Arabidopsis thaliana (taxid:3702)]

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 76/186 (40%), Positives = 105/186 (56%)

Query:     1 MKAGAVEIGEAKNSTPTY--GVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQ 58
             MK  A  IG A++ T +   G N+G++I DF+LRL A   AL +A  MGT++ETLPFF+Q
Sbjct:    18 MKGKAPLIGVARDHTTSGSGGYNRGLAIFDFLLRLAAIVAALAAAATMGTSDETLPFFTQ 77

Query:    59 LIRFRAEYDDLPSFTFFVAANAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXX 118
              ++F A YDDLP+F FFV A A+V GY           I+R  A   R+LL+  DT    
Sbjct:    78 FLQFEASYDDLPTFQFFVIAMALVGGYLVLSLPISVVTILRPLATAPRLLLLVLDTGVLA 137

Query:   119 XXXXXXXXXXXXXXXXHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLC 178
                             H GN   NW  ICQQF  FCQ+ SG+++ +FV +    +++++ 
Sbjct:   138 LNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDFCQKSSGAVVSAFVSVVFFTILVVIS 197

Query:   179 GVALSR 184
             GVAL R
Sbjct:   198 GVALKR 203

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2038638 CASP3 "AT2G27370" [Arabidopsis thaliana (taxid:3702)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 63/166 (37%), Positives = 92/166 (55%)

Query:    19 GVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAA 78
             G  +G++I DFVLRL+A   A+ +A  M TT ETLPFF+Q ++F+A+Y DLP+ + FV  
Sbjct:    54 GWKRGVAIFDFVLRLIAAITAMAAAAKMATTEETLPFFTQFLQFQADYTDLPTMSSFVIV 113

Query:    79 NAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGN 138
             N++V GY           I+R  A   R+ L+  DT                    H GN
Sbjct:   114 NSIVGGYLTLSLPFSIVCILRPLAVPPRLFLILCDTVMMGLTLMAASASAAIVYLAHNGN 173

Query:   139 AKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSR 184
             + +NW  +CQQF  FCQ  SG+++ SF+   LL+ +++L   AL R
Sbjct:   174 SSSNWLPVCQQFGDFCQGTSGAVVASFIAATLLMFLVILSAFALKR 219

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2053514 CASP1 "AT2G36100" [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 63/166 (37%), Positives = 90/166 (54%)

Query:    19 GVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAA 78
             G  +G++I DF+LRL A A  +G+A  M T  ETLPFF+Q ++F+A YDDLP+F +FV A
Sbjct:    40 GAKRGLAIFDFLLRLAAIAVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIA 99

Query:    79 NAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGN 138
              AVV+ Y           IVR  A   R++L+  DT                    H GN
Sbjct:   100 VAVVASYLVLSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGN 159

Query:   139 AKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSR 184
                NW  ICQQF  FCQ +S +++   + +   I++I++  +AL R
Sbjct:   160 QSTNWLPICQQFGDFCQNVSTAVVADSIAILFFIVLIIISAIALKR 205

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2128776 AT4G03540 "AT4G03540" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 51/147 (34%), Positives = 67/147 (45%)

Query:    30 VLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGYXXXX 89
             VLRL AF  AL + I M T+ E   F +  I   A+Y D+ +F +FV ANAVVS Y    
Sbjct:    12 VLRLAAFGAALAALIVMITSRERASFLA--ISLEAKYTDMAAFKYFVIANAVVSVYSFLV 69

Query:    90 XXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGNAKANWFAICQQ 149
                  F    S   K    +V  D                      KGNA A W  IC Q
Sbjct:    70 L----FLPKESLLWK---FVVVLDLVMTMLLTSSLSAALAVAQVGKKGNANAGWLPICGQ 122

Query:   150 FNSFCQRISGSLIGSFVGMALLILIIM 176
                FC +I+G+LI  FV + L +L+++
Sbjct:   123 VPKFCDQITGALIAGFVALVLYVLLLL 149

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2020773 AT1G03700 "AT1G03700" [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 49/147 (33%), Positives = 67/147 (45%)

Query:    30 VLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGYXXXX 89
             VLR  AF  ALG+ IAM T+ E   FF  +I   A+Y DL +F +FV ANA+V+ Y    
Sbjct:    12 VLRFAAFCAALGAVIAMITSRERSSFF--VISLVAKYSDLAAFKYFVIANAIVTVYSFLV 69

Query:    90 XXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGNAKANWFAICQQ 149
                  F    S   K    +V  D                      +GNA A W  IC Q
Sbjct:    70 L----FLPKESLLWK---FVVVLDLMVTMLLTSSLSAAVAVAQVGKRGNANAGWLPICGQ 122

Query:   150 FNSFCQRISGSLIGSFVGMALLILIIM 176
                FC +I+G+LI   V + L + +++
Sbjct:   123 VPRFCDQITGALIAGLVALVLYVFLLI 149

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|A2Y2B7 BLE3 "CASP-like protein BLE3" [Oryza sativa Indica Group (taxid:39946)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 45/151 (29%), Positives = 69/151 (45%)

Query:    26 ILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGY 85
             +++ VLRL A A A  +A+ M T+ ET  FF   I+  A+Y   PSF FFV A AV + Y
Sbjct:     7 LMNAVLRLAAAAAAATAAVVMVTSRETTSFFG--IQMEAKYSYTPSFIFFVVAYAVAAAY 64

Query:    86 XXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGNAKANWFA 145
                         V + +  SR+ L   D                       GN+ A W  
Sbjct:    65 SLLVLA------VPAGSALSRLALTT-DVVLGMVLAGAVASAGAISDIAKNGNSHAGWLP 117

Query:   146 ICQQFNSFCQRISGSLIGSFVGMALLILIIM 176
             +C Q +++C  +  +LI  FV +A+  +++M
Sbjct:   118 VCGQIHAYCNHVMAALIAGFVALAVHFVVVM 148

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0009741 "response to brassinosteroid stimulus" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS

UNIPROTKB|Q84UT5 BLE3 "CASP-like protein BLE3" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 45/151 (29%), Positives = 69/151 (45%)

Query:    26 ILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGY 85
             +++ VLRL A A A  +A+ M T+ ET  FF   I+  A+Y   PSF FFV A AV + Y
Sbjct:     7 LMNAVLRLAAAAAAATAAVVMVTSRETTSFFG--IQMEAKYSYTPSFIFFVVAYAVAAAY 64

Query:    86 XXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGNAKANWFA 145
                         V + +  SR+ L   D                       GN+ A W  
Sbjct:    65 SLLVLA------VPAGSALSRLALTT-DVVLGMVLAGAVASAGAISDIAKNGNSHAGWLP 117

Query:   146 ICQQFNSFCQRISGSLIGSFVGMALLILIIM 176
             +C Q +++C  +  +LI  FV +A+  +++M
Sbjct:   118 VCGQIHAYCNHVMAALIAGFVALAVHFVVVM 148

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IMP

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0035264 "multicellular organism growth" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P0DI32	CASP_TARKO	No assigned EC number	0.5149	0.9027	0.8067	N/A	no
G7L218	CSPL3_MEDTR	No assigned EC number	0.625	0.9945	0.9892	N/A	no
P0DI30	CASP1_TRIPD	No assigned EC number	0.5628	0.9027	0.8028	N/A	no
P0DI31	CASP2_TRIPD	No assigned EC number	0.5269	0.9027	0.8267	N/A	no
P0DI36	CSPL4_BRADI	No assigned EC number	0.6208	0.9837	0.9891	yes	no
P0DI34	CASP2_PANVG	No assigned EC number	0.6455	0.9945	0.9583	N/A	no
B6T959	CASP1_MAIZE	No assigned EC number	0.6666	0.8756	0.8663	N/A	no
B9T4E6	CSPL3_RICCO	No assigned EC number	0.7351	1.0	0.9946	N/A	no
P0DI58	CSPL1_LOTJA	No assigned EC number	0.5614	1.0	0.9893	N/A	no
F2QA93	CASP_ORYRU	No assigned EC number	0.6540	0.9729	0.9677	N/A	no
D7M7B3	CASP5_ARALL	No assigned EC number	0.6445	0.8918	0.8823	N/A	no
A7PMY7	CASP3_VITVI	No assigned EC number	0.7678	0.9027	0.8978	yes	no
A2XU91	CASP1_ORYSI	No assigned EC number	0.6540	0.9729	0.9677	N/A	no
P0DI53	CASP3_MIMGU	No assigned EC number	0.5449	0.9027	0.8067	N/A	no
P0DI54	CSPL_MALDO	No assigned EC number	0.7450	0.8270	0.8742	N/A	no
D7LAP2	CASP2_ARALL	No assigned EC number	0.5080	1.0	0.9068	N/A	no
B9S8Z3	CSPL1_RICCO	No assigned EC number	0.5675	0.9783	0.9476	N/A	no
P0DI35	CSPL_LACSI	No assigned EC number	0.5652	0.9945	0.9583	N/A	no
Q7XUV7	CASP1_ORYSJ	No assigned EC number	0.6540	0.9729	0.9677	yes	no
Q60D27	CSPL2_SOLDE	No assigned EC number	0.5621	1.0	1.0	N/A	no
C5Y9U6	CASP1_SORBI	No assigned EC number	0.6349	0.9945	0.9583	N/A	no
P0DI44	CASP_SOLTU	No assigned EC number	0.6756	0.9945	0.9787	N/A	no
P0DI42	CSPL_WHEAT	No assigned EC number	0.6201	0.9675	0.9781	N/A	no
B8AEC9	CSPL2_ORYSI	No assigned EC number	0.5373	0.9945	0.9154	N/A	no
Q9LXF3	CASP5_ARATH	No assigned EC number	0.6566	0.8918	0.8823	yes	no
Q67X40	CASP3_ORYSJ	No assigned EC number	0.6648	0.9837	0.9891	yes	no
D7KBH3	CSPL1_ARALL	No assigned EC number	0.5340	0.9945	0.8479	N/A	no
B9SX12	CASP3_RICCO	No assigned EC number	0.5209	0.9027	0.835	N/A	no
A2YAZ1	CASP3_ORYSI	No assigned EC number	0.6648	0.9837	0.9891	N/A	no
C5Z7E3	CASP2_SORBI	No assigned EC number	0.6686	0.9027	0.8978	N/A	no
G7JG80	CSPL1_MEDTR	No assigned EC number	0.5430	0.9945	0.9735	N/A	no
Q5NRN4	CSPL1_SOLDE	No assigned EC number	0.5621	1.0	1.0	N/A	no
P0DI59	CSPL_LACSA	No assigned EC number	0.6108	0.9675	1.0	N/A	no
B9I534	CASP1_POPTR	No assigned EC number	0.7081	1.0	0.9946	yes	no
G7KGQ4	CSPL2_MEDTR	No assigned EC number	0.6162	0.9945	0.9892	N/A	no
P0DI33	CASP1_PANVG	No assigned EC number	0.6707	0.8864	0.8913	N/A	no
C6T1G0	CSPL1_SOYBN	No assigned EC number	0.6451	1.0	0.9946	yes	no
B9SCX0	CASP1_RICCO	No assigned EC number	0.5388	0.9729	0.8372	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	185
TIGR01569	154	TIGR01569, A_tha_TIGR01569, plant integral membran	1e-43
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	2e-41

>gnl|CDD|233471 TIGR01569, A_tha_TIGR01569, plant integral membrane protein TIGR01569

 Score =  142 bits (359), Expect = 1e-43
 Identities = 71/149 (47%), Positives = 95/149 (63%)

Query: 29  FVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGYLIL 88
            +LR+LAF+  L +AI MGT  ET   F QLI F+A++ DLP+F +FV ANA+  GY +L
Sbjct: 1   LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLL 60

Query: 89  SLSLSIFHIVRSRAQKSRILLVFFDTAMLALLTGSASAAAAIVYLAHKGNAKANWFAICQ 148
           SL +SIF +++ R     I L F D  MLALL+   SAAAA+ Y+   GN +A W  IC 
Sbjct: 61  SLVVSIFGLLKRRVFFKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICG 120

Query: 149 QFNSFCQRISGSLIGSFVGMALLILIIML 177
            F  FC RI+GSL  S   + LL+L+ +L
Sbjct: 121 VFGKFCDRIAGSLALSLFAVILLVLLSIL 149

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized. Length = 154

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score =  136 bits (344), Expect = 2e-41
 Identities = 65/152 (42%), Positives = 92/152 (60%), Gaps = 4/152 (2%)

Query: 21  NKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANA 80
            + + + + VLRL AF  AL +A+ MGT  +T PFF   I+ +A + DLP+F + V ANA
Sbjct: 1   GRPLRLAELVLRLAAFVLALAAAVVMGTNKQTKPFFF--IQKKASFSDLPAFRYLVVANA 58

Query: 81  VVSGYLILSLSLSIFHIVRSRAQKSRILLVFF--DTAMLALLTGSASAAAAIVYLAHKGN 138
           + +GY +L L LS++ + R + +   +  + F  D  M  LL  +ASAAAAIVYLA  GN
Sbjct: 59  IAAGYSLLQLVLSVYLLSRKKPRTKGLAWLLFILDQVMAYLLLAAASAAAAIVYLARNGN 118

Query: 139 AKANWFAICQQFNSFCQRISGSLIGSFVGMAL 170
           + ANW  IC QF  FC R + S+  SF+   L
Sbjct: 119 SHANWMKICNQFGRFCNRAAASVALSFLAFLL 150

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	185
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	100.0
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	100.0
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	98.67

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=100.00  E-value=3e-46  Score=295.05  Aligned_cols=154  Identities=47%  Similarity=0.817  Sum_probs=146.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCccccccccceeeeeeeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhhH
Q 045471           29 FVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQKSRIL  108 (185)
Q Consensus        29 l~LR~~a~~~sl~a~~vM~t~~q~~~~~~~~~~~~~~f~~~~af~ylv~a~~i~~~Ysllql~~~i~~~~~~~~~~~~~~  108 (185)
                      ++||+++++++++|+++|+||+|+.+++++.+++++||+|+++|+|+|++|+|+|+|+++|++++++.+.+++....+|+
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~~~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~~~~~~~~~   80 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKRRVFFKLIA   80 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeecccceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence            46999999999999999999999998866557889999999999999999999999999999999998877766666799


Q ss_pred             HhhHHHHHHHHHHHHhhhHHHHHHHHHhCCccchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 045471          109 LVFFDTAMLALLTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVAL  182 (185)
Q Consensus       109 ~f~~Dqv~ayLL~saasAA~~i~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Si~lsf~a~~~~~~~s~lSa~~L  182 (185)
                      +|++||+++||++||++||+++++++|+||+|.+|+|+|+++++||+|+++|++++|++++++++++++|++++
T Consensus        81 ~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~~~~FC~~~~~sl~~s~~a~v~~~llsv~Sa~~~  154 (154)
T TIGR01569        81 LFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAISL  154 (154)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999985

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=100.00  E-value=8e-40  Score=256.47  Aligned_cols=147  Identities=38%  Similarity=0.683  Sum_probs=136.4

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhcCccccccccceeeeeeeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 045471           22 KGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSR  101 (185)
Q Consensus        22 ~~~~~~~l~LR~~a~~~sl~a~~vM~t~~q~~~~~~~~~~~~~~f~~~~af~ylv~a~~i~~~Ysllql~~~i~~~~~~~  101 (185)
                      |+.+..+++||+++++++++|+++|++|+|+.++.+  .+++++|+|+++|+|++++|+|+++|+++|++.+++.+.+++
T Consensus         1 ~~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~~~--~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~~~~~~~   78 (149)
T PF04535_consen    1 RSLRIASLVLRLLAFVLSLAALAVMATNKQTVSVFS--IQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIYSLSRGK   78 (149)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhcCCcceeec--cccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            456789999999999999999999999999987753  678999999999999999999999999999999999887654


Q ss_pred             --ccchhhHHhhHHHHHHHHHHHHhhhHHHHHHHHHhCCccchhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q 045471          102 --AQKSRILLVFFDTAMLALLTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMAL  170 (185)
Q Consensus       102 --~~~~~~~~f~~Dqv~ayLL~saasAA~~i~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Si~lsf~a~~~  170 (185)
                        .+...|++|++||+++||++|+++||+++++++++|+++.+|+++|+.+++||+|+++|++++|+++++
T Consensus        79 ~~~~~~~~~~f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~~~~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   79 LRSKLLAWFLFILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQFGKFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             CcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccchhhHHHHHHHHHHHHHHHHHC
Confidence              234568999999999999999999999999999999999999999999999999999999999999874

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=98.67  E-value=7.5e-07  Score=67.63  Aligned_cols=141  Identities=16%  Similarity=0.055  Sum_probs=99.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCccccccccceeeeeeeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc
Q 045471           25 SILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSFTFFVAANAVVSGYLILSLSLSIFHIVRSRAQK  104 (185)
Q Consensus        25 ~~~~l~LR~~a~~~sl~a~~vM~t~~q~~~~~~~~~~~~~~f~~~~af~ylv~a~~i~~~Ysllql~~~i~~~~~~~~~~  104 (185)
                      +....+||+++++++++.+.+++....+..        .......++..|.+.+.++...+++.-++..........+..
T Consensus         3 ~s~~~ilR~lq~~~~~i~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~   74 (144)
T PF01284_consen    3 RSPSGILRILQLVFALIIFGLVASSIATGS--------QIYGGSPSACGFALFVAVLSFLYTLIFLLLYLFSLKYRPRIP   74 (144)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHHHhccc--------cccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            345789999999999999999998764321        123455678899999999999999888888776521122233


Q ss_pred             hhhHHhhHHHHHHHHHHHHhhhHHHHHHHHHhCCccchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 045471          105 SRILLVFFDTAMLALLTGSASAAAAIVYLAHKGNAKANWFAICQQFNSFCQRISGSLIGSFVGMALLILIIM  176 (185)
Q Consensus       105 ~~~~~f~~Dqv~ayLL~saasAA~~i~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Si~lsf~a~~~~~~~s~  176 (185)
                      +.+.+++.|.+++.+-+.+..+-+.-..-.+.+++   +.+.+...++-|+...++.+++++.++.+..+..
T Consensus        75 ~~~~~~~~~~v~~il~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~Aa~~f~~~~~~l~~~s~~  143 (144)
T PF01284_consen   75 WPLVEFIFDAVFAILWLAAFIALAAYLSDHSCSNT---GNDYSYSGCSRCGAWKAAAAFGFLNWLLFIVSAV  143 (144)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhcCcccccC---CCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            45678999999999988876665432211111111   2233344567899999999999999999987764

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00