Citrus Sinensis ID: 045506

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170---
Protein Sequence
MSLLIFLLHLNFISSCLGARKLTSLYQPSPIAMTYHKGALLEGNLPVSILWYGEFSPAQKSIIADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMKKAGKGQTRVFIASQFSDKNCSLGKILKKAQGFCMSNCGFHGSNPQHNSAFIWVGNSVTPCPGQCAWPFHQPIY
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHcccccccccccccccccccccccccEEccEEEEEEEEEcccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEcEEEcccccccccHHHHcccccccccccccccccccEEEEEcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccccEEcccEEEEEEEEccccHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHccccccEEEEEcEEEccccccccccHHHccHcHHccccccccccccEEEEEEcccccccccccccccccccc
Coil and Loop (DISEMBL)
MSLLIFLLHLNFISSClgarkltslyqpspiamtyhkgallegnlpvsilwygefspaqKSIIADFLLslnpqknqlgshfttpqpsvskrWHTIQTYMKKAGKGQTRVFIAsqfsdkncsLGKILKKAQgfcmsncgfhgsnpqhnsafiwvgnsvtpcpgqcawpfhqpiy
Flexible Loop (DISEMBL)
MSLLIFLLHLNFISSCLGARKLTSLYQPSPIAMTYHKGALLEGNLPVSILWYGEFSPAQKSIIADFLLSLNPQKNQLGShfttpqpsvskrWHTIQTYMKKAGKGQTRVFIASQFSDKNCSLGKILKKAQGFCMSNCGFHGSNPQHNSAFIWVGNSVTPCPGQCAWPFHQPIY
Low Complexity Region (SEG)
MSLLIFLLHLNFISSCLGARKLTSLYQPSPIAMTYHKGALLEGNLPVSILWYGEFSPAQKSIIADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMKKAGKGQTRVFIASQFSDKNCSLGKILKKAQGFCMSNCGFHGSNPQHNSAFIWVGNSVTPCPGQCAWPFHQPIY
Disordered region (IsUnstruct)
**LLIFLLHLNFISSCLGARKLTSLYQPSPIAMTYHKGALLEGNLPVSILWYGEFSPAQKSIIADFLLSLN******************KRWHTIQTYMKKAGKGQTRVFIASQFSDKNCSLGKILKKAQGFCMSNCGFHGSNPQHNSAFIWVGNSVTPCPGQCAWPFH****
Disordered Region (DISOPRED)
MSLLIFLLHLNFISSC*************PIAMTYHKGALLEGNLPVSILWYGEFSPAQKSIIADFL**********************KRWHTIQTY***************QFSDKNCSLGKILKKAQGFCMSNCGFHGSNPQHNSAFIWVGNSVTPCPGQCAWPFHQPIY
Disordered Region (DISEMBL)
MSLLIFLLHLNFISSCLGARKLTSLYQPSPIAMTYHKGALLEGNLPVSILWYGEFSPAQKSIIADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMKKAGKGQTRVFIASQFSDKNCSLGKILKKAQGFCMSNCGFHGSNPQHNSAFIWVGNSVTPCPGQCAWPFHQPIY
Disordered Region (DISPRO)
MSLLIFLLHLNFISSCLGARKLTSLYQPSPIAMTYHKGALLEGNLPVSILWYGEFSPAQKSIIADFLLSLN*************QPSVSKRWHTIQTYMKKAGKGQTRVFIASQFSDKNCSLGKILKKAQGFCMSNCGFHGSNPQHNSAFIWVGNSVTPCPGQCAWPFHQP**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSLLIFLLHLNFISSCLGARKLTSLYQPSPIAMTYHKGALLEGNLPVSILWYGEFSPAQKSIIADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMKKAGKGQTRVFIASQFSDKNCSLGKILKKAQGFCMSNCGFHGSNPQHNSAFIWVGNSVTPCPGQCAWPFHQPIY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	173
225459249	316	PREDICTED: uncharacterized protein LOC10	0.988	0.541	0.565	3e-59
302141980	215	unnamed protein product [Vitis vinifera]	0.947	0.762	0.587	1e-51
255545760	313	conserved hypothetical protein [Ricinus	0.971	0.536	0.553	1e-50
449528271	313	PREDICTED: uncharacterized protein LOC10	0.965	0.533	0.442	8e-41
242062462	330	hypothetical protein SORBIDRAFT_04g02737	0.872	0.457	0.456	1e-38
449469851	273	PREDICTED: uncharacterized protein LOC10	0.803	0.509	0.476	1e-38
218191607	328	hypothetical protein OsI_08995 [Oryza sa	0.947	0.5	0.423	2e-38
195608908	325	phi-1-like phosphate-induced protein [Ze	0.959	0.510	0.435	3e-38
357138040	318	PREDICTED: uncharacterized protein LOC10	0.936	0.509	0.438	5e-38
326501902	327	predicted protein [Hordeum vulgare subsp	0.849	0.449	0.446	7e-38

>gi|225459249|ref|XP_002285764.1| PREDICTED: uncharacterized protein LOC100253906 [Vitis vinifera] gi|147765767|emb|CAN68979.1| hypothetical protein VITISV_040775 [Vitis vinifera]

 Score =  233 bits (593), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 113/200 (56%), Positives = 142/200 (71%), Gaps = 29/200 (14%)

Query: 1   MSLLIFLLHLNFISSCLGARKLTSLYQPSPIAMTYHKGALLEGNLPVSILWYGEFSPAQK 60
           + +++ + HL FIS C  ARKLTSLYQP P+A+TYH GALLEG+LPVSILWYG+FSPAQK
Sbjct: 12  LVVVVVIFHLFFISPCFCARKLTSLYQPPPMALTYHNGALLEGHLPVSILWYGQFSPAQK 71

Query: 61  SIIADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMKKAGKGQTRVFIASQFSDKNC 120
           SI+ADFLLSL+P       + ++ +PS S+ W TIQTY+KKAGK + ++ +++Q SD++C
Sbjct: 72  SIVADFLLSLDPHDQP--ENLSSKKPSTSQWWKTIQTYLKKAGKREIQIELSNQISDESC 129

Query: 121 SLGKILKKAQ---------------------------GFCMSNCGFHGSNPQHNSAFIWV 153
           S+GK LKK+Q                           GFCMSNCGFHGS+ +  SAFIWV
Sbjct: 130 SMGKTLKKSQISELARAVSSKSSGLTLVLTAKDVAVEGFCMSNCGFHGSDARKRSAFIWV 189

Query: 154 GNSVTPCPGQCAWPFHQPIY 173
           GNS T CPGQCAWPFHQPIY
Sbjct: 190 GNSETQCPGQCAWPFHQPIY 209

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302141980|emb|CBI19183.3| unnamed protein product [Vitis vinifera]

 Score =  207 bits (528), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 101/172 (58%), Positives = 128/172 (74%), Gaps = 8/172 (4%)

Query: 1   MSLLIFLLHLNFISSCLGARKLTSLYQPSPIAMTYHKGALLEGNLPVSILWYGEFSPAQK 60
           + +++ + HL FIS C  ARKLTSLYQP P+A+TYH GALLEG+LPVSILWYG+FSPAQK
Sbjct: 12  LVVVVVIFHLFFISPCFCARKLTSLYQPPPMALTYHNGALLEGHLPVSILWYGQFSPAQK 71

Query: 61  SIIADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMKKAGKGQTRVFIASQFSDKNC 120
           SI+ADFLLSL+P       + ++ +PS S+ W TIQTY+KKAGK + ++ +++Q SD + 
Sbjct: 72  SIVADFLLSLDPHDQP--ENLSSKKPSTSQWWKTIQTYLKKAGKREIQIELSNQISDDSK 129

Query: 121 SLGKIL------KKAQGFCMSNCGFHGSNPQHNSAFIWVGNSVTPCPGQCAW 166
           S G  L         +GFCMSNCGFHGS+ +  SAFIWVGNS T CPGQCAW
Sbjct: 130 SSGLTLVLTAKDVAVEGFCMSNCGFHGSDARKRSAFIWVGNSETQCPGQCAW 181

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545760|ref|XP_002513940.1| conserved hypothetical protein [Ricinus communis] gi|223547026|gb|EEF48523.1| conserved hypothetical protein [Ricinus communis]

 Score =  204 bits (519), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/204 (55%), Positives = 144/204 (70%), Gaps = 36/204 (17%)

Query: 1   MSL--LIFLLHLNFISSCLGARKLTSLYQPSPIAMTYHKGALLEGNLPVSILWYGEFSPA 58
           MSL  ++F+L +   +SC  +RKLTSLY+P P++++YH G LLEG++ VSILWYG+F+P 
Sbjct: 12  MSLFFIVFIL-ITLTNSCHCSRKLTSLYEPPPMSLSYHNGPLLEGDVHVSILWYGQFTPP 70

Query: 59  QKSIIADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMKKAGKGQTRVFIASQFSDK 118
           Q+SI++DFLLSLNP      S  ++PQPSVSK W+ +QTYMK+AGK +T + +++Q SDK
Sbjct: 71  QQSIVSDFLLSLNPTH----SSSSSPQPSVSKWWNLVQTYMKRAGKKETDIVLSNQTSDK 126

Query: 119 NCSLGKILKKA-----------------------------QGFCMSNCGFHGSNPQHNSA 149
           N SLGKILKK+                             +GFCMSNCGFHGSN + NSA
Sbjct: 127 NYSLGKILKKSHITELANKVINNSRPGGLTIVLTDKEVAVEGFCMSNCGFHGSNSKQNSA 186

Query: 150 FIWVGNSVTPCPGQCAWPFHQPIY 173
           FIWVGNSVT CPGQCAWPFHQPIY
Sbjct: 187 FIWVGNSVTQCPGQCAWPFHQPIY 210

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449528271|ref|XP_004171128.1| PREDICTED: uncharacterized protein LOC101224428 [Cucumis sativus]

 Score =  171 bits (434), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 88/199 (44%), Positives = 118/199 (59%), Gaps = 32/199 (16%)

Query: 3   LLIFLLHLNFISSCLGARKLTSLYQPSPIAMTYHKGALLEGNLPVSILWYGEFSPAQKSI 62
           ++I    +N  +   GARKL SLY+  P+ + YH GALL+GN+PVSILWYG+F+  QK+I
Sbjct: 12  VVIVFCMMNLFNLGFGARKLASLYEAPPMGIRYHNGALLQGNVPVSILWYGKFTAPQKAI 71

Query: 63  IADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYM-KKAGKGQTRVFIASQFSDKNCS 121
           + DF LSL+   ++  S      PSVS+ W+T+Q  + +K+ K   ++ +A Q +D   S
Sbjct: 72  VIDFFLSLDSHSDKSNSV----TPSVSRWWNTVQVRLYEKSRKKDAKLILAKQITDDEYS 127

Query: 122 LGKILKKAQ---------------------------GFCMSNCGFHGSNPQHNSAFIWVG 154
           +GK LK+ Q                           GFCMS CGFH  + +  SAFIWVG
Sbjct: 128 IGKFLKRNQISELSRRAGSKYGGMTLVLTAEDVAVEGFCMSTCGFHNWDHKSKSAFIWVG 187

Query: 155 NSVTPCPGQCAWPFHQPIY 173
           NSV  CPGQCAWPFHQPIY
Sbjct: 188 NSVNQCPGQCAWPFHQPIY 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242062462|ref|XP_002452520.1| hypothetical protein SORBIDRAFT_04g027370 [Sorghum bicolor] gi|241932351|gb|EES05496.1| hypothetical protein SORBIDRAFT_04g027370 [Sorghum bicolor]

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/195 (45%), Positives = 112/195 (57%), Gaps = 44/195 (22%)

Query: 17  LGARKLTSLYQPSPIAM-TYHKGALLEGNLPVSILWYGEFSPAQKSIIADFLLSLNPQKN 75
           +  R L  LY+P   A+ TYH GA+L+G +PVSILWYG F+PAQK+++ DFL SL     
Sbjct: 35  VAGRSLLELYKPPASALLTYHNGAVLQGRIPVSILWYGRFTPAQKAVVTDFLQSLTT--- 91

Query: 76  QLGSHFTTPQPSVSKRWHTI-QTYMKKA---------GKGQTRVFIASQFSDKNCSLGKI 125
              +  TTP PSVS+ W+TI Q Y+ KA         G G  +V +  Q +D+ CSLGK 
Sbjct: 92  ---ASPTTPSPSVSQWWNTINQLYLSKARTRGNGARSGGGSAQVALVGQTTDEGCSLGKR 148

Query: 126 LKKAQ---------------------------GFCMSNCGFHGSNPQHNSAFIWVGNSVT 158
           L  AQ                           GFCMS CG HGS+ +  +A+IWVGNS T
Sbjct: 149 LTLAQLPRLAARAGTKKGGIALVLTAQDVAVDGFCMSRCGLHGSDARAGTAYIWVGNSAT 208

Query: 159 PCPGQCAWPFHQPIY 173
            CPGQCAWPFHQP+Y
Sbjct: 209 QCPGQCAWPFHQPLY 223

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469851|ref|XP_004152632.1| PREDICTED: uncharacterized protein LOC101221347 [Cucumis sativus]

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/170 (47%), Positives = 104/170 (61%), Gaps = 31/170 (18%)

Query: 31  IAMTYHKGALLEGNLPVSILWYGEFSPAQKSIIADFLLSLNPQKNQLGSHFTTPQPSVSK 90
           + + YH GALL+GN+PVSILWYG+F+  QK+I+ DF LSL+   ++  S      PSVS+
Sbjct: 1   MGIRYHNGALLQGNVPVSILWYGKFTAPQKAIVIDFFLSLDSHSDKSNSV----TPSVSR 56

Query: 91  RWHTIQTYMKKAGKGQTRVFIASQFSDKNCSLGKILKKAQ-------------------- 130
            W+T+Q YMK+AGK   ++ +A Q +D   S+GK LK+ Q                    
Sbjct: 57  WWNTVQVYMKRAGKKDAKLILAKQITDDEYSIGKFLKRNQISELSRRAGSKYGGMTLVLT 116

Query: 131 -------GFCMSNCGFHGSNPQHNSAFIWVGNSVTPCPGQCAWPFHQPIY 173
                  GFCMS CGFH  + +  SAFIWVGNSV  CPGQCAWPFHQPIY
Sbjct: 117 AEDVAVEGFCMSTCGFHNWDHKSKSAFIWVGNSVNQCPGQCAWPFHQPIY 166

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218191607|gb|EEC74034.1| hypothetical protein OsI_08995 [Oryza sativa Indica Group]

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/210 (42%), Positives = 117/210 (55%), Gaps = 46/210 (21%)

Query: 3   LLIFLLHLNFISSCLGARKLTSLYQPSPIA-MTYHKGALLEGNLPVSILWYGEFSPAQKS 61
           +L+ +L L       GAR+L  LY+P P   +TYH G +L G++PVS++WYG F+PAQK+
Sbjct: 19  VLVSVLLLCSAHPSAGARRLMELYKPPPSEQLTYHNGTVLRGDIPVSVVWYGRFTPAQKA 78

Query: 62  IIADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTI-QTYMKKAGKG----------QTRVF 110
           +++DFLLSL             P PSVS+ W+TI Q Y+ KA              T+V 
Sbjct: 79  VVSDFLLSLTVAS-------PAPTPSVSQWWNTINQLYLSKAAAQGKNGGGGGKITTQVR 131

Query: 111 IASQFSDKNCSLGKILKKAQ---------------------------GFCMSNCGFHGSN 143
           +A Q +D  CSLGK LK +Q                           GFCMS CG H SN
Sbjct: 132 LAGQLTDDQCSLGKSLKLSQLPALAARAKPKKGGIALVLTAQDVSVEGFCMSRCGTHASN 191

Query: 144 PQHNSAFIWVGNSVTPCPGQCAWPFHQPIY 173
            +  +A++WVGNS T CPGQCAWPFHQP+Y
Sbjct: 192 AKARTAYVWVGNSATQCPGQCAWPFHQPVY 221

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195608908|gb|ACG26284.1| phi-1-like phosphate-induced protein [Zea mays]

 Score =  162 bits (411), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 88/202 (43%), Positives = 114/202 (56%), Gaps = 36/202 (17%)

Query: 4   LIFLLHLNFISSCLGARKLTSLYQPSPIAM-TYHKGALLEGNLPVSILWYGEFSPAQKSI 62
           L+ +L L+      G R L  LY+P   A+ TYH GA+L+G +PVSI+WYG F+PAQK++
Sbjct: 21  LVSVLILSSARLSAGGRSLLELYKPPASALLTYHNGAVLQGRIPVSIIWYGRFTPAQKAV 80

Query: 63  IADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTI-QTYMKKA---GKGQTRVFIASQFSDK 118
           + DFL SL        +    P PSVS+ W TI Q Y+ KA   G G  RV +  Q +D+
Sbjct: 81  VTDFLGSLT----TAAASPLAPSPSVSQWWSTIDQLYLSKARGSGSGGARVALVGQATDE 136

Query: 119 NCSLGKILKKAQ---------------------------GFCMSNCGFHGSNPQHNSAFI 151
            CSLGK L  AQ                           GFC S CG HGS+ +  +A++
Sbjct: 137 GCSLGKRLTLAQLPQLAARAGPRKGGIALVLTAQDVGVDGFCTSRCGLHGSDARAGTAYV 196

Query: 152 WVGNSVTPCPGQCAWPFHQPIY 173
           WVGNS T CPGQCAWPFH+P+Y
Sbjct: 197 WVGNSATQCPGQCAWPFHRPLY 218

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357138040|ref|XP_003570606.1| PREDICTED: uncharacterized protein LOC100845396 [Brachypodium distachyon]

 Score =  162 bits (410), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 89/203 (43%), Positives = 116/203 (57%), Gaps = 41/203 (20%)

Query: 5   IFLLHLNFISSCLGA-RKLTSLYQPSPIAM-TYHKGALLEGNLPVSILWYGEFSPAQKSI 62
           +FLL L    S  GA RKL  LY+P P  + TYH GA+L+G++PVSILWYG F+PAQK++
Sbjct: 16  VFLLSLVAHGSSAGASRKLLELYRPQPSELLTYHNGAVLQGSIPVSILWYGHFTPAQKAV 75

Query: 63  IADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQT-YMKKAGKG----QTRVFIASQFSD 117
           ++DFLLSL        ++  TP PSVS+ W+TI   Y+ K         T+V +A Q +D
Sbjct: 76  VSDFLLSLT-------TNSQTPSPSVSQWWNTINNLYLSKTNGAHASINTQVTLARQITD 128

Query: 118 KNCSLGKILK---------------------------KAQGFCMSNCGFHGSNPQHNSAF 150
             CSLGK LK                             +GFCMS CG HGS+    +A 
Sbjct: 129 DKCSLGKNLKLSNIPELAAKAKPNKGGIALVLTAEDVAMEGFCMSRCGLHGSDTAAQTAH 188

Query: 151 IWVGNSVTPCPGQCAWPFHQPIY 173
           +W GN+   CPGQCAWPFH+P+Y
Sbjct: 189 VWAGNAAAQCPGQCAWPFHKPVY 211

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326501902|dbj|BAK06443.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  162 bits (409), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 84/188 (44%), Positives = 110/188 (58%), Gaps = 41/188 (21%)

Query: 20  RKLTSLYQPSPIAM-TYHKGALLEGNLPVSILWYGEFSPAQKSIIADFLLSLNPQKNQLG 78
           R+L  LY+P P  + TYH GA+L G +PVS+LWYG F+PAQK++++DFLLSL        
Sbjct: 40  RRLMELYKPDPSELLTYHNGAVLHGAIPVSVLWYGRFTPAQKAVVSDFLLSLT------- 92

Query: 79  SHFTTPQPSVSKRWHTI-QTYMKKAGKGQ-----TRVFIASQFSDKNCSLGKILK----- 127
           +    P PSVS+ W TI Q Y+ KA  G      T+V +A Q SD+ CSLGK LK     
Sbjct: 93  AASPAPTPSVSQWWGTIAQLYLSKANGGANAKRATQVALAGQASDERCSLGKSLKLPQLA 152

Query: 128 ----------------------KAQGFCMSNCGFHGSNPQHNSAFIWVGNSVTPCPGQCA 165
                                   +GFC S CG HGS+ +  +A++WVGNS + CPGQCA
Sbjct: 153 ALAARAKPRKGGIALVLTAEDVAVEGFCRSRCGMHGSDARARTAYVWVGNSASQCPGQCA 212

Query: 166 WPFHQPIY 173
           WPFH+P+Y
Sbjct: 213 WPFHKPVY 220

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	173
TAIR|locus:2173428	305	EXL2 "AT5G64260" [Arabidopsis	0.653	0.370	0.360	3.7e-31
TAIR|locus:2203314	309	PHI-1 "AT1G35140" [Arabidopsis	0.254	0.142	0.591	3.1e-28
TAIR|locus:2184792	278	EXL4 "AT5G09440" [Arabidopsis	0.254	0.158	0.652	4.7e-25
TAIR|locus:2059652	363	EXL5 "AT2G17230" [Arabidopsis	0.514	0.245	0.356	1.9e-17
TAIR|locus:2138753	314	EXO "AT4G08950" [Arabidopsis t	0.728	0.401	0.388	4.1e-17
TAIR|locus:2063399	323	EXL7 "AT2G35150" [Arabidopsis	0.693	0.371	0.298	2.8e-14
TAIR|locus:2075482	332	EXL6 "AT3G02970" [Arabidopsis	0.306	0.159	0.372	1.8e-09
TAIR|locus:2153087	337	EXL3 "AT5G51550" [Arabidopsis	0.520	0.267	0.333	5.9e-08

TAIR|locus:2173428 EXL2 "AT5G64260" [Arabidopsis thaliana (taxid:3702)]

 Score = 185 (70.2 bits), Expect = 3.7e-31, Sum P(2) = 3.7e-31
 Identities = 44/122 (36%), Positives = 66/122 (54%)

Query:     6 FLLHLNFISSCLGARKLTSLYQPSPIAMTYHKGALLEGNLPVSILWYGEFSPAQKSIIAD 65
             F + L    +  G     +L +  P+ M YH G LL+GN+ V+++WYG+F+P Q+S+I D
Sbjct:     7 FAIFLTLFFATAGF-SAAALVEEQPLVMKYHNGVLLKGNITVNLVWYGKFTPIQRSVIVD 65

Query:    66 FLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMKKAGKGQTRVFIASQFSDKNCSLGKI 125
             F+ SLN  K+   S      PSV+  W T + Y    G G + + +  Q   +N  LGK 
Sbjct:    66 FIHSLN-SKDVASS---AAVPSVASWWKTTEKYK---G-GSSTLVVGKQLLLENYPLGKS 117

Query:   126 LK 127
             LK
Sbjct:   118 LK 119

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0046685 "response to arsenic-containing substance" evidence=RCA

TAIR|locus:2203314 PHI-1 "AT1G35140" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 3.1e-28, Sum P(2) = 3.1e-28
 Identities = 29/49 (59%), Positives = 33/49 (67%)

Query:   130 QGFCMSNCGFHGSNPQHNS-----AFIWVGNSVTPCPGQCAWPFHQPIY 173
             QGFCM+ CG HG+           A+IWVGNS T CPGQCAWPFH P+Y
Sbjct:   154 QGFCMNRCGSHGTGSGSGKKGSRFAYIWVGNSETQCPGQCAWPFHAPVY 202

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0040007 "growth" evidence=IMP

GO:0001666 "response to hypoxia" evidence=IEP

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009612 "response to mechanical stimulus" evidence=RCA

TAIR|locus:2184792 EXL4 "AT5G09440" [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 4.7e-25, Sum P(2) = 4.7e-25
 Identities = 30/46 (65%), Positives = 34/46 (73%)

Query:   130 QGFCMSNCGFHGSNPQH-NS-AFIWVGNSVTPCPGQCAWPFHQPIY 173
             +G CM+ CG HGS     NS A++WVGNS T CPG CAWPFHQPIY
Sbjct:   138 EGLCMNRCGTHGSKSSSVNSGAYVWVGNSETQCPGYCAWPFHQPIY 183

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0050832 "defense response to fungus" evidence=IEP

TAIR|locus:2059652 EXL5 "AT2G17230" [Arabidopsis thaliana (taxid:3702)]

 Score = 146 (56.5 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
 Identities = 36/101 (35%), Positives = 55/101 (54%)

Query:    31 IAMTYHKGALLEGNLPVSI--LWYGEFSPAQKSIIADFLLSLNPQKNQLGSHFTTPQPSV 88
             + + YH G +L  + P++I  +WYG++S   KS+I DFL S++  K         P PSV
Sbjct:    77 VHLRYHMGPVLSSS-PINIYVIWYGQWSRPHKSLIRDFLNSISDAK--------APSPSV 127

Query:    89 SKRWHTIQTYMKKAGKGQTR-VFIASQFSDKNCSLGKILKK 128
             S+ W T   Y  + G   +R V IA ++SD   S G+ L +
Sbjct:   128 SEWWRTASLYTDQTGSNVSRSVLIAGEYSDSKYSHGQHLTR 168

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2138753 EXO "AT4G08950" [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 54/139 (38%), Positives = 80/139 (57%)

Query:     1 MSLLIF--LLHLNFISSCLGARKLTSLYQPSPIAMT-YHKGALLEGNLPVSILWYGEFSP 57
             M LL+F   L L+ +   + AR L S  +P+   +  YHKGALL G + V+++WYG+F P
Sbjct:     1 MYLLVFKLFLFLSLLQISVSARNLAS-QEPNQFQLLKYHKGALLSGKISVNLIWYGKFKP 59

Query:    58 AQKSIIADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMKKA--GKGQT--RVFIAS 113
             +Q++II+DF+ SL    +   +  T  QPSV+  W T + Y K A   K  +   + +  
Sbjct:    60 SQRAIISDFITSLT---HTSPTSKTLHQPSVATWWKTTEKYYKLATPSKNSSPLSLTLGK 116

Query:   114 QFSDKNCSLGKIL--KKAQ 130
             Q  D++CSLGK L  KK Q
Sbjct:   117 QIIDESCSLGKSLTDKKIQ 135

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA;IMP

GO:0005829 "cytosol" evidence=RCA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016126 "sterol biosynthetic process" evidence=RCA

TAIR|locus:2063399 EXL7 "AT2G35150" [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
 Identities = 40/134 (29%), Positives = 63/134 (47%)

Query:     1 MSLLIFLLHLNFISSCLGARKLTSL-YQPSP--IAMTYHKGALLEGNLP-VSILWYGEFS 56
             MSL+I     + + +  G     S  Y+ S   + + YH G ++   +  + I+WYG ++
Sbjct:     1 MSLIIVFFFFSLLLTSNGQFFDESKNYEGSSDLVDLQYHLGPVISSPVTSLYIIWYGRWN 60

Query:    57 PAQKSIIADFLLSLN-PQKNQLGSHFTTPQPSVSKRWHTIQTYMKKAGKGQTRVFIAS-Q 114
             P  +SII DFL S++ P   Q         PSVS  W T++ Y  + G   T   + S +
Sbjct:    61 PTHQSIIRDFLYSVSAPAPAQY--------PSVSNWWKTVRLYRDQTGSNITDTLVLSGE 112

Query:   115 FSDKNCSLGKILKK 128
             F D   S G  L +
Sbjct:   113 FHDSTYSHGSHLTR 126

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2075482 EXL6 "AT3G02970" [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query:    43 GNLPVSILWYGEFSPAQKSIIADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMKK 101
             G L +S+LWYG+F+P QK  + DF+ SLN    + G       P VS  W  +++Y ++
Sbjct:    37 GTLDLSLLWYGQFTPTQKERVHDFIESLNFDAKE-GL-----DPKVSAWWKVVESYQER 89

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2153087 EXL3 "AT5G51550" [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 5.9e-08, P = 5.9e-08
 Identities = 33/99 (33%), Positives = 52/99 (52%)

Query:    31 IAMTYHKGALLEGNLPVSILWYGEFSPAQKSIIADFLLSLNPQKNQLGSHFTTPQPSVSK 90
             + + YH G +L  N+ V  +WYG +  +QK II +F+ S++     +GS      PSVS 
Sbjct:    53 VRLRYHMGPVLTNNITVHPIWYGTWQKSQKKIIREFINSISA----VGSK----HPSVSG 104

Query:    91 RWHTIQTYMKKAGKGQT-RVFIASQFSDKNCSLGKILKK 128
              W T+Q Y  + G   T  V +  + +D+  S GK L +
Sbjct:   105 WWKTVQLYTDQTGSNITGTVRLGEEKNDRFYSHGKSLTR 143


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.440    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      173       173   0.00097  108 3  11 22  0.37    32
                                                     31  0.48    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  175 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.86u 0.14s 16.00t   Elapsed:  00:00:01
  Total cpu time:  15.86u 0.14s 16.00t   Elapsed:  00:00:01
  Start:  Tue May 21 00:38:18 2013   End:  Tue May 21 00:38:19 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0080167 "response to karrikin" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

GO:0007020 "microtubule nucleation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00015204001 SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (305 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	173
pfam04674	273	pfam04674, Phi_1, Phosphate-induced protein 1 cons	2e-58

>gnl|CDD|218205 pfam04674, Phi_1, Phosphate-induced protein 1 conserved region

 Score =  182 bits (465), Expect = 2e-58
 Identities = 70/173 (40%), Positives = 95/173 (54%), Gaps = 39/173 (22%)

Query: 33  MTYHKGALLEGNLPVSILWYGEFSPAQKSIIADFLLSLNPQKNQLGSHFTTPQPSVSKRW 92
           +TYH GA+L GN+ V+++WYG+F+PAQ++II DFLLSL+            P PSV+  W
Sbjct: 1   LTYHMGAVLSGNISVNLIWYGKFTPAQRAIIRDFLLSLSSPSP-------APSPSVAAWW 53

Query: 93  HTIQTYMKKAGKGQT-RVFIASQFSDKNCSLGKILKKA---------------------- 129
            T++ Y  + G   +  + +  Q  D++ SLGK L +                       
Sbjct: 54  KTVELYYDQTGANISASLVLGGQVLDESYSLGKSLTRLQIQSLAAKAGTHRGGVYLVLTS 113

Query: 130 -----QGFCMSNCGFHGSNP----QHNSAFIWVGNSVTPCPGQCAWPFHQPIY 173
                +GFCMS CGFHGS       +  A+ WVGNS T CPGQCAWPFHQP+Y
Sbjct: 114 PDVTVEGFCMSRCGFHGSTFPSVVGYRFAYAWVGNSATQCPGQCAWPFHQPVY 166

Family of conserved plant proteins. Conserved region identified in a phosphate-induced protein of unknown function. Length = 273

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	173
PF04674	273	Phi_1: Phosphate-induced protein 1 conserved regio	100.0

>PF04674 Phi_1: Phosphate-induced protein 1 conserved region; InterPro: IPR006766 This entry represents a family of conserved plant proteins

Probab=100.00  E-value=3.7e-66  Score=446.83  Aligned_cols=134  Identities=56%  Similarity=1.099  Sum_probs=127.5

Q ss_pred             eeecCCcceecceeEEEEEeecCChhhHhHHHHHHHhcCcccccCCCCCCCCCCchhhhhhhhHHhhhccCCCc-eeEEe
Q 045506           33 MTYHKGALLEGNLPVSILWYGEFSPAQKSIIADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMKKAGKGQ-TRVFI  111 (173)
Q Consensus        33 l~YH~GplLtg~i~V~lIwYG~ftp~QksiI~DFl~SLs~~~~~~~~~~~~~~PSVs~WW~t~~~Y~~~~~~~v-~~v~l  111 (173)
                      |+|||||||+|+|+|||||||+|+|+||+||+|||+||++       +++++.|||++||+|+++|++++++++ .+|+|
T Consensus         1 L~YH~GplLtg~i~V~lIWYG~ftp~QkaiI~DFl~SLs~-------~~~~~~PSVa~WW~t~~~Y~~~~~~~~~~~v~l   73 (273)
T PF04674_consen    1 LTYHGGPLLTGNINVYLIWYGRFTPAQKAIIRDFLRSLSS-------SAPAPSPSVAQWWKTTEKYYDQAGANVSGRVVL   73 (273)
T ss_pred             CCCCCCceeecCeeEEEEEeeCCCHHHHHHHHHHHHhcCC-------CCCCCCCChhhhhhhHHhhcccccccccceEEE
Confidence            7999999999999999999999999999999999999998       434789999999999999999999988 99999


Q ss_pred             eeEEecCCCCCCCCcccc---------------------------CCcccccccCCCCC----CCCceeEEEecCCCCCC
Q 045506          112 ASQFSDKNCSLGKILKKA---------------------------QGFCMSNCGFHGSN----PQHNSAFIWVGNSVTPC  160 (173)
Q Consensus       112 ~~qv~D~~ySlGKsL~~~---------------------------~gFC~s~CG~H~~~----~~~~~~YaWVGNs~~qC  160 (173)
                      |+|+.|++|||||+|++.                           |||||++||+|++.    .+.+++|+||||||+||
T Consensus        74 ~~qv~D~~ySlGksL~~~~i~~lv~~~~~~~~gvylVLTa~DV~v~gFC~~~CG~H~~~~~~~~~~~~~YawVGns~~qC  153 (273)
T PF04674_consen   74 GGQVSDENYSLGKSLSRSQIQQLVAKAIPDPNGVYLVLTAADVAVEGFCMSRCGFHGSTFPSSVGKRLPYAWVGNSETQC  153 (273)
T ss_pred             eeEEecCCCCCCcccCHHHHHHHHHhcCCCCCceEEEEecccceecccccccccCCcCCcccccccceeEEEecCccCCC
Confidence            999999999999999988                           99999999999985    34689999999999999


Q ss_pred             CCCCCCCCCCCCC
Q 045506          161 PGQCAWPFHQPIY  173 (173)
Q Consensus       161 PG~CAwPFh~P~Y  173 (173)
                      ||+||||||||+|
T Consensus       154 Pg~CAwPf~~p~y  166 (273)
T PF04674_consen  154 PGQCAWPFHQPIY  166 (273)
T ss_pred             CCCCCCCCccccc
Confidence            9999999999998

A conserved region in these proteins was identified in a phosphate-induced protein of unknown function [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00