Citrus Sinensis ID: 045631


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600
MGGLCSRSSNVDNAPGESFPSVNGHFGLVYQPRELPMKVNNNSTPSPVGENVENKELTEPFSFPTVNAIAAYGTNLEDINDGIPRLPRALSNKSRSTKSKQVAVAKVSEVSSLLGRAGTVGLGKAVDVLDTLGSSMTSLNLGSGFTSGVTTKGNKITILAFEVANTIVKGANLMQSLSKENIKHLKEVVLPSEGVQNLISRDMDELLRIAAADKREELKVFSGEVVRFGNRCEDPQLHNLDRYFAKLGSELTPQNQLKEEARTIMDQLMTLVQYTAELYHELHAWTDLNKIIDASFRKRIILMLLKEVMEKLVDTVHFLHLEIHEAFGSADGDRPVKGSQNSHKKLGSAGLALHYANIVTQIDTLVSRSSSVPPNTRDALYQGLPPTIKSALRSKLQLFQVKEELTIQQIKAEMEKTLQWLVPIATNTTKSEMNRKPVGTDLLRIETLHHADKEKTEAYILELVVWLHHLVSQARAGNVGIRSPVKSPIRSPNQKAIPLSTNPPHPPSPMLTVEDQEMLRDVSKRKKTPGISKSQEFDTAKNRLSKHHRLTKSNSHSPTSETKRDPFPIRRPSSVPVIDFDIDRIKALDVIDRVDTIRSL
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccHHHHHHHcccccccccccccccccccccccEEEEEHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHEHHHcccccHHHHHHHHHHHHHHHHHHEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHccccccccc
cccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccEccccccHHccccHccHHHHHHHHHHccccccccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEHccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccHHHHcccccccccccccccccccccccccccccccccEEEEcccHHHHHHHEccccccccc
mgglcsrssnvdnapgesfpsvnghfglvyqprelpmkvnnnstpspvgenvenkeltepfsfptVNAIAAYgtnledindgiprlpralsnksrstKSKQVAVAKVSEVSSLlgragtvglGKAVDVLDTLgssmtslnlgsgftsgvttkgnkITILAFEVANTIVKGANLMQSLSKENIKHLKevvlpsegvqnlISRDMDELLRIAAADKREELKVFSGEVvrfgnrcedpqlhnLDRYFAKlgseltpqnqlKEEARTIMDQLMTLVQYTAELYHELHAWTDLNKIIDASFRKRIILMLLKEVMEKLVDTVHFLHLEIHEafgsadgdrpvkgsqnshkklGSAGLALHYANIVTQIDTLvsrsssvppntrdalyqglppTIKSALRSKLQLFQVKEELTIQQIKAEMEKTLQWLVPIatnttksemnrkpvgtdLLRIETLHHADKEKTEAYILELVVWLHHLVSQaragnvgirspvkspirspnqkaiplstnpphppspmltveDQEMLRDVSkrkktpgisksqefdtaknrlskhhrltksnshsptsetkrdpfpirrpssvpvidfdidrikaldvidrvdtirsl
mgglcsrssnvdnapgesfpsvnGHFGLVYQPRELPMKVNNNSTPSPVGENVENKELTEPFSFPTVNAIAAYGTNLEDINDGIPRLPralsnksrstkskqvavakvsevssllgragtvglGKAVDVLDTLGSSMTSLNLGSGFTSGVTTKGNKITILAFEVANTIVKGANLMQSLSKENIKHLKEVVLPSEGVQNLISRDMDELLRIAAADKREELKvfsgevvrfgnrcedpqlHNLDRYFAKLGSELTPQNQLKEEARTIMDQLMTLVQYTAELYHELHAWTDLNKIIDASFRKRIILMLLKEVMEKLVDTVHFLHLEIHEAfgsadgdrpVKGSQNSHKKLGSAGLALHYANIVTQIDTLVSRSSSVPPNTRDALYQGLPPTIKSALRSKLQLFQVKEELTIQQIKAEMEKTLQWLVPIatnttksemnrkpVGTDLLRIETLHHADKEKTEAYILELVVWLHHLVSQARAGNVGIRSPVKSPIRSPNQkaiplstnpphppsPMLTVEDQEMLRDVSkrkktpgisksqefdtaknrlskhhrltksnshsptsetkrdpfpirrpssvpvidfdidrikaldvidrvdtirsl
MGGLCSRSSNVDNAPGESFPSVNGHFGLVYQPRELPMKVNNNSTPSPVGENVENKELTEPFSFPTVNAIAAYGTNLEDINDGIPRLPRALSNKSRSTKSKQVAVAKVSEVSSLLGRAGTVGLGKAVDVLDTLGSSMTSLNLGSGFTSGVTTKGNKITILAFEVANTIVKGANLMQSLSKENIKHLKEVVLPSEGVQNLISRDMDELLRIAAADKREELKVFSGEVVRFGNRCEDPQLHNLDRYFAKLGSELTPQNQLKEEARTIMDQLMTLVQYTAELYHELHAWTDLNKIIDASFRKRIILMLLKEVMEKLVDTVHFLHLEIHEAFGSADGDRPVKGSQNSHKKLGSAGLALHYANIVTQIDTLVSRSSSVPPNTRDALYQGLPPTIKSALRSKLQLFQVKEELTIQQIKAEMEKTLQWLVPIATNTTKSEMNRKPVGTDLLRIETLHHADKEKTEAYILELVVWLHHLVSQARAGNVGIRSPVKSPIRSPNQKAIplstnpphppspmltVEDQEMLRDVSKRKKTPGISKSQEFDTAKNRLSKHHRLTKSNSHSPTSETKRDPFPIRRPSSVPVIDFDIDRIKALDVIDRVDTIRSL
************************HFGLVY******************************FSFPTVNAIAAYGTNLEDIND***************************EVSSLLGRAGTVGLGKAVDVLDTLGSSMTSLNLGSGFTSGVTTKGNKITILAFEVANTIVKGANLMQSLSKENIKHLKEVVLPSEGVQNLISRDMDELLRIAAADKREELKVFSGEVVRFGNRCEDPQLHNLDRYFAKLGSEL*********ARTIMDQLMTLVQYTAELYHELHAWTDLNKIIDASFRKRIILMLLKEVMEKLVDTVHFLHLEIHEAFG********************AGLALHYANIVTQIDTLV*************LYQGLPPTIKSALRSKLQLFQVKEELTIQQIKAEMEKTLQWLVPIATNTT********VGTDLLRIETLHHADKEKTEAYILELVVWLHHLVSQARAGNVG**********************************************************************************************VPVIDFDIDRIKALDVIDRVD*****
MGGLCSR*************************************************************************************************************AGTVGLGKAVDVLDTLG***********************TILAFEVANTIVKGANLMQSLSKENIKHLKEVVLPSEGVQNLISRDMDELLRIAAADKREELKVFSGEVVRFGNRCEDPQLHNLDRYFAKLGSELTPQNQLKEEARTIMDQLMTLVQYTAELYHELHAWTDLNKII*******IILMLLKEVMEKLVDTVHFLHLEIHEAF***********************LALHYANIVTQIDTLVSR******NTRDALYQGLPPTIKSALRSKLQLFQVKEELTIQQIKAEMEKTLQWLVPIATNTTKS**********LLRIETLHHADKEKTEAYILELVVWLHHLV*********************************************EMLRD*****************************************************VPVIDFDIDRIKALDVIDRVDTIR**
************NAPGESFPSVNGHFGLVYQPRELPMKVNNNSTPSPVGENVENKELTEPFSFPTVNAIAAYGTNLEDINDGIPRLPRAL******************EVSSLLGRAGTVGLGKAVDVLDTLGSSMTSLNLGSGFTSGVTTKGNKITILAFEVANTIVKGANLMQSLSKENIKHLKEVVLPSEGVQNLISRDMDELLRIAAADKREELKVFSGEVVRFGNRCEDPQLHNLDRYFAKLGSELTPQNQLKEEARTIMDQLMTLVQYTAELYHELHAWTDLNKIIDASFRKRIILMLLKEVMEKLVDTVHFLHLEIHEAFGSAD**************LGSAGLALHYANIVTQIDTLVSRSSSVPPNTRDALYQGLPPTIKSALRSKLQLFQVKEELTIQQIKAEMEKTLQWLVPIATNTTKSEMNRKPVGTDLLRIETLHHADKEKTEAYILELVVWLHHLVSQARAGNVGIRSPVKSPIRSPNQKAIPLSTNPPHPPSPMLTVEDQEML*****************FDTAKNRLSK********************FPIRRPSSVPVIDFDIDRIKALDVIDRVDTIRSL
*************************************************************************************************************************LGKAVDVLDTLGSS**********TS*****GNKITILAFEVANTIVKGANLMQSLSKENIKHLKEVVLPSEGVQNLISRDMDELLRIAAADKREELKVFSGEVVRFGNRCEDPQLHNLDRYFAKLGSELTPQNQLKEEARTIMDQLMTLVQYTAELYHELHAWTDLNKIIDASFRKRIILMLLKEVMEKLVDTVHFLHLEIHEAFGSA*************KKLGSAGLALHYANIVTQIDTLVSRSSSVPPNTRDALYQGLPPTIKSALRSKLQLFQVKEELTIQQIKAEMEKTLQWLVPIATNTTKSEMNRKPVGTDLLRIETLHHADKEKTEAYILELVVWLHHLVSQARAG**********************************TVE*QEMLRDVSKRK*********************************************PSSVPVIDFDIDRIKALDVIDRVDTI***
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MGGLCSRSSNVDNAPGESFPSVNGHFGLVYQPRELPMKVNNNSTPSPVGENVENKELTEPFSFPTVNAIAAYGTNLEDINDGIPRLPRALSNKSRSTKSKQVAVAKVSEVSSLLGRAGTVGLGKAVDVLDTLGSSMTSLNLGSGFTSGVTTKGNKITILAFEVANTIVKGANLMQSLSKENIKHLKEVVLPSEGVQNLISRDMDELLRIAAADKREELKVFSGEVVRFGNRCEDPQLHNLDRYFAKLGSELTPQNQLKEEARTIMDQLMTLVQYTAELYHELHAWTDLNKIIDASFRKRIILMLLKEVMEKLVDTVHFLHLEIHEAFGSADGDRPVKGSQNSHKKLGSAGLALHYANIVTQIDTLVSRSSSVPPNTRDALYQGLPPTIKSALRSKLQLFQVKEELTIQQIKAEMEKTLQWLVPIATNTTKSEMNRKPVGTDLLRIETLHHADKEKTEAYILELVVWLHHLVSQARAGNVGIRSPVKSPIRSPNQKAIPLSTNPPHPPSPMLTVEDQEMLRDVSKRKKTPGISKSQEFDTAKNRLSKHHRLTKSNSHSPTSETKRDPFPIRRPSSVPVIDFDIDRIKALDVIDRVDTIRSL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query600
255586811637 conserved hypothetical protein [Ricinus 0.975 0.918 0.756 0.0
224135475649 predicted protein [Populus trichocarpa] 0.993 0.918 0.736 0.0
297735822653 unnamed protein product [Vitis vinifera] 0.998 0.917 0.737 0.0
225463926655 PREDICTED: uncharacterized protein LOC10 0.998 0.914 0.734 0.0
449443881652 PREDICTED: uncharacterized protein LOC10 0.986 0.907 0.687 0.0
297846428662 hypothetical protein ARALYDRAFT_473586 [ 0.993 0.900 0.660 0.0
15218580657 uncharacterized protein [Arabidopsis tha 0.971 0.887 0.652 0.0
356533999667 PREDICTED: uncharacterized protein LOC10 0.995 0.895 0.679 0.0
356574581662 PREDICTED: uncharacterized protein LOC10 0.995 0.901 0.678 0.0
224146429498 predicted protein [Populus trichocarpa] 0.745 0.897 0.761 0.0
>gi|255586811|ref|XP_002534019.1| conserved hypothetical protein [Ricinus communis] gi|223525970|gb|EEF28360.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  939 bits (2428), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/652 (75%), Positives = 525/652 (80%), Gaps = 67/652 (10%)

Query: 1   MGGLCSRSSNVDNAPGESFPSVNGHF---GLVYQPRELPMKVNNNSTPSPVGENVENKEL 57
           MGGLCSRSS VDNAPG  FP +NGHF    LVYQ REL  K+N+N+TPSPV ENVENK++
Sbjct: 1   MGGLCSRSSTVDNAPGGGFPHLNGHFNGSSLVYQSREL--KINSNTTPSPVVENVENKQV 58

Query: 58  TEPFSFPTVNAIAAYGTNLEDINDGIPRLPRALSNKSRSTKSKQVAVAKVSEVSSLLGRA 117
            EP SFP        G N +D N+GIP L R   NKSRSTKSKQ   AKVSEVSSLLGRA
Sbjct: 59  REPLSFPD-------GINPDDFNEGIPHLSR---NKSRSTKSKQ---AKVSEVSSLLGRA 105

Query: 118 GTVGLGKAVDVLDTLGSSMTSLNLGSGFTSGVTTKGNKITILAFEVANTIVKGANLMQSL 177
           GTVGL KAV+VLDTLGSSMT+LNL SGFTSGVTTKGNKI+ILAFEVANTIVKGANLMQSL
Sbjct: 106 GTVGLDKAVEVLDTLGSSMTNLNLSSGFTSGVTTKGNKISILAFEVANTIVKGANLMQSL 165

Query: 178 SKENIKHLKEVVLPSEGVQNLISRDMDELLRIAAADKREELKVFSGEVVRFGNRCEDPQL 237
           SKEN KHLKEVVLPSEGVQNLISRDMDELLRIAAADKREELKVFSGEVVRFGNRC+DPQ 
Sbjct: 166 SKENTKHLKEVVLPSEGVQNLISRDMDELLRIAAADKREELKVFSGEVVRFGNRCKDPQW 225

Query: 238 HNLDRYFAKLGSELTPQNQLKEEARTIMDQLMTLVQYTAELYHELHAWTDLNK------- 290
           HNLDRYF KLGSELTP+ QLKEEA  +M QLM LVQYTAELYHE+HA     +       
Sbjct: 226 HNLDRYFEKLGSELTPEKQLKEEAEIVMKQLMNLVQYTAELYHEMHALDRFEQDYRRKLQ 285

Query: 291 ---------------IIDASFR-----------KRIILMLLKEVMEKLVDTVHFLHLEIH 324
                          I+ A  +           K +   +L+EVMEKLVD VHFLHLEIH
Sbjct: 286 EDDSSNGPQRGDSLAILRAELKSQRKHVKSLKKKSLWSKILEEVMEKLVDIVHFLHLEIH 345

Query: 325 EAFGSADGDRPVKGSQNSHKKLGSAGLALHYANIVTQIDTLVSRSSSVPPNTRDALYQGL 384
           EAFGSADGDRPVKGS  SHKKLGSAGLALHYANI+TQIDTLVSRSSSVPPNTRDALYQGL
Sbjct: 346 EAFGSADGDRPVKGSSISHKKLGSAGLALHYANIITQIDTLVSRSSSVPPNTRDALYQGL 405

Query: 385 PPTIKSALRSKLQLFQVKEELTIQQIKAEMEKTLQWLVPIATNTTK-------------- 430
           PP+IKSALR KLQ   VKEELT+ QIKAEME+TLQWLVPIATNTTK              
Sbjct: 406 PPSIKSALRCKLQSLHVKEELTVAQIKAEMEQTLQWLVPIATNTTKAHHGFGWVGEWANT 465

Query: 431 -SEMNRKPVG-TDLLRIETLHHADKEKTEAYILELVVWLHHLVSQARAGNVGIRSPVKSP 488
            SE+NRKP G TDLLRIETLHHADKEKTE YIL+LVV LHHLVSQARA N GIRSPVKSP
Sbjct: 466 GSEVNRKPTGQTDLLRIETLHHADKEKTETYILDLVVRLHHLVSQARATNGGIRSPVKSP 525

Query: 489 IRSPNQKAIPLSTNPPHPPSPMLTVEDQEMLRDVSKRKKTPGISKSQEFDTAKNRLSKHH 548
           IRSPNQK I LST+ P  P PMLTVEDQEMLRDV KRKKTPGISKSQEFDTAK RL KHH
Sbjct: 526 IRSPNQKTIQLSTHKPSSPLPMLTVEDQEMLRDVPKRKKTPGISKSQEFDTAKTRLCKHH 585

Query: 549 RLTKSNSHSPTSETKRDPFPIRRPSSVPVIDFDIDRIKALDVIDRVDTIRSL 600
           RL+KS+SHSP +ETK+DPFPIRRPSSVPVIDFDIDRIKALDVIDRVDTIRSL
Sbjct: 586 RLSKSSSHSPMTETKKDPFPIRRPSSVPVIDFDIDRIKALDVIDRVDTIRSL 637




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135475|ref|XP_002327227.1| predicted protein [Populus trichocarpa] gi|222835597|gb|EEE74032.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297735822|emb|CBI18542.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225463926|ref|XP_002266039.1| PREDICTED: uncharacterized protein LOC100263351 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449443881|ref|XP_004139704.1| PREDICTED: uncharacterized protein LOC101220504 [Cucumis sativus] gi|449516605|ref|XP_004165337.1| PREDICTED: uncharacterized protein LOC101226834 [Cucumis sativus] Back     alignment and taxonomy information
>gi|297846428|ref|XP_002891095.1| hypothetical protein ARALYDRAFT_473586 [Arabidopsis lyrata subsp. lyrata] gi|297336937|gb|EFH67354.1| hypothetical protein ARALYDRAFT_473586 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15218580|ref|NP_174692.1| uncharacterized protein [Arabidopsis thaliana] gi|37202044|gb|AAQ89637.1| At1g34320 [Arabidopsis thaliana] gi|51970944|dbj|BAD44164.1| hypothetical protein [Arabidopsis thaliana] gi|51971088|dbj|BAD44236.1| hypothetical protein [Arabidopsis thaliana] gi|332193576|gb|AEE31697.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356533999|ref|XP_003535545.1| PREDICTED: uncharacterized protein LOC100812676 [Glycine max] Back     alignment and taxonomy information
>gi|356574581|ref|XP_003555424.1| PREDICTED: uncharacterized protein LOC100811297 [Glycine max] Back     alignment and taxonomy information
>gi|224146429|ref|XP_002326004.1| predicted protein [Populus trichocarpa] gi|222862879|gb|EEF00386.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query600
TAIR|locus:2026135657 AT1G34320 [Arabidopsis thalian 0.465 0.424 0.704 2.3e-159
TAIR|locus:504956337649 AT5G08660 "AT5G08660" [Arabido 0.463 0.428 0.545 1.1e-135
TAIR|locus:505006158615 AT1G30755 [Arabidopsis thalian 0.298 0.291 0.583 2.3e-64
TAIR|locus:2086218531 AT3G23160 "AT3G23160" [Arabido 0.215 0.242 0.342 1.5e-24
TAIR|locus:2151451474 AT5G51670 [Arabidopsis thalian 0.208 0.263 0.343 3.9e-19
TAIR|locus:2184417599 AT5G04550 "AT5G04550" [Arabido 0.226 0.227 0.333 4e-19
TAIR|locus:2026135 AT1G34320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 984 (351.4 bits), Expect = 2.3e-159, Sum P(2) = 2.3e-159
 Identities = 203/288 (70%), Positives = 235/288 (81%)

Query:     1 MGGLCSRSSNVDNAPGESFPSVNGHFGLVYQPRELPMKVNNNST---PSPVGENVE-NKE 56
             MGGLCSRSS+V+NAPG +F  VNGH  L     +L      +     PSPV ENV+ NK 
Sbjct:     1 MGGLCSRSSSVNNAPGGTFAHVNGHH-LNNNASDLNSHSGESGLKDDPSPVTENVDDNKH 59

Query:    57 LTEPFSFPTVNAIAAYGTNLEDINDGIPRLPRALSNKSRSTKSKQVAVAKVSEVSSLLGR 116
              +E FSFP V++    G++ ++I DGIPRL R LS KSRSTKS+Q AVAKVSEVSSLLGR
Sbjct:    60 TSESFSFPIVSS----GSHPQNIEDGIPRLSRVLSQKSRSTKSRQAAVAKVSEVSSLLGR 115

Query:   117 AGTVGLGKAVDVLDTLGSSMTSLNLGSGFTSGVTTKGNKITILAFEVANTIVKGANLMQS 176
             AGT+GLGKAVDVLDTLGSSMT+LNL  GF+S  T KGNKI+IL+FEVANTIVKGANLM S
Sbjct:   116 AGTMGLGKAVDVLDTLGSSMTNLNLSGGFSSATTVKGNKISILSFEVANTIVKGANLMHS 175

Query:   177 LSKENIKHLKEVVLPSEGVQNLISRDMDELLRIAAADKREELKVFSGEVVRFGNRCEDPQ 236
             LSK++I HLKEVVLPSEGVQNLIS+DMDELLRIAAADKREEL++FSGEVVRFGNRC+DPQ
Sbjct:   176 LSKDSITHLKEVVLPSEGVQNLISKDMDELLRIAAADKREELRIFSGEVVRFGNRCKDPQ 235

Query:   237 LHNLDRYFAKLGSELTPQNQLKEEARTIMDQLMTLVQYTAELYHELHA 284
              HNLDR+F +LGSE TPQ  LK+EA TIM Q+M+ V +TA+LYHELHA
Sbjct:   236 YHNLDRFFDRLGSEFTPQKHLKQEAETIMHQMMSFVHFTADLYHELHA 283


GO:0009507 "chloroplast" evidence=ISM
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:504956337 AT5G08660 "AT5G08660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006158 AT1G30755 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086218 AT3G23160 "AT3G23160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151451 AT5G51670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184417 AT5G04550 "AT5G04550" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query600
pfam0500387 pfam05003, DUF668, Protein of unknown function (DU 1e-34
pfam1196157 pfam11961, DUF3475, Domain of unknown function (DU 1e-23
>gnl|CDD|218374 pfam05003, DUF668, Protein of unknown function (DUF668) Back     alignment and domain information
 Score =  125 bits (316), Expect = 1e-34
 Identities = 43/86 (50%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 346 LGSAGLALHYANIVTQIDTLVSRSSSVPPNTRDALYQGLPPTIKSALRSKLQLF-QVKEE 404
           LG AGLALHYAN++ QI+ L S   SVP   RD LYQ LP TI++ALRSKL+ + +  +E
Sbjct: 2   LGGAGLALHYANVIIQIEKLASVPHSVPLEARDDLYQMLPATIRAALRSKLKPYLKDYDE 61

Query: 405 LTIQQIKAEMEKTLQWLVPIATNTTK 430
               + K  M++ L+WL P+A NT +
Sbjct: 62  GLATEWKDAMDRILEWLAPMAHNTIR 87


Uncharacterized plant protein. Length = 87

>gnl|CDD|192898 pfam11961, DUF3475, Domain of unknown function (DUF3475) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 600
PF0500389 DUF668: Protein of unknown function (DUF668); Inte 100.0
PF1196157 DUF3475: Domain of unknown function (DUF3475); Int 99.94
>PF05003 DUF668: Protein of unknown function (DUF668); InterPro: IPR007700 This is a family of uncharacterised plant proteins of unknown function Back     alignment and domain information
Probab=100.00  E-value=7.6e-44  Score=307.48  Aligned_cols=86  Identities=62%  Similarity=0.957  Sum_probs=85.1

Q ss_pred             CcchhhhhhhhHHHHHHHHHhhhcCCCCCCchHHHhhccCchHHHHHHHhcccccccc---chhhHHHHHHHHHHHhhhh
Q 045631          345 KLGSAGLALHYANIVTQIDTLVSRSSSVPPNTRDALYQGLPPTIKSALRSKLQLFQVK---EELTIQQIKAEMEKTLQWL  421 (600)
Q Consensus       345 TLG~AgLALHYANIIi~IEkLvs~p~~v~~~aRD~LYqmLP~sIRsaLRskLr~~~~~---de~la~ewk~amekiL~WL  421 (600)
                      |||+|||||||||||+|||+|+++|++||+|+||+||||||++||++||+|||+|++.   |+.+++|||++|+|||+||
T Consensus         1 tLG~AgLALhYANvI~~ie~l~~~p~~v~~~aRD~LY~mLP~~ir~aLr~kL~~~~~~~~~d~~~a~~~~~~m~kiL~WL   80 (89)
T PF05003_consen    1 TLGGAGLALHYANVIIQIEKLVSRPSSVPPNARDDLYQMLPPSIRSALRSKLRSYWKKAIYDELLAAEWKDAMEKILEWL   80 (89)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHcCcccCCchHHHHHHhhCcHHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999999999999999999999   9999999999999999999


Q ss_pred             hhhhhhccc
Q 045631          422 VPIATNTTK  430 (600)
Q Consensus       422 aPmAhNTir  430 (600)
                      +||||||+|
T Consensus        81 ~P~A~nt~r   89 (89)
T PF05003_consen   81 APMAHNTIR   89 (89)
T ss_pred             HHHHHhccC
Confidence            999999997



>PF11961 DUF3475: Domain of unknown function (DUF3475); InterPro: IPR021864 This presumed domain is functionally uncharacterised Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query600
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 59.9 bits (144), Expect = 2e-09
 Identities = 76/536 (14%), Positives = 155/536 (28%), Gaps = 166/536 (30%)

Query: 55  KELTEPFSFPTVNAIAAYGTNLEDINDGIPRLPRALSNKSRSTKSKQV--AVAKVSEVSS 112
            E  +P S  T      Y    + + +      +   N SR     ++  A+ ++    +
Sbjct: 100 TEQRQP-SMMTRM----YIEQRDRLYNDNQVFAK--YNVSRLQPYLKLRQALLELRPAKN 152

Query: 113 LL--GRAGTVGLGKAVDVLDTLGSSMTSLNLGSGFTSGV--TTKGNKITILAFEVANTIV 168
           +L  G  G+   GK    LD       S  +       +      N  +        T++
Sbjct: 153 VLIDGVLGS---GKTWVALDVC----LSYKVQCKMDFKIFWLNLKNCNS------PETVL 199

Query: 169 KGANLMQSLSKENIKHLKEVVLPSEGVQNLISRDMDELLR-IAAADKREEL----KVFSG 223
           +   ++Q L  +   +       S  ++  I     EL R + +      L     V + 
Sbjct: 200 E---MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA 256

Query: 224 EVVR-FGNRC-------------------------EDPQL----HNLDRYFAK-LGSELT 252
           +    F   C                         +   +      +     K L     
Sbjct: 257 KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD---C 313

Query: 253 PQNQLKEEARTIMDQLMTLVQYTAELYHELHA-WT--------DLNKIIDAS-------- 295
               L  E  T   + ++++   AE   +  A W          L  II++S        
Sbjct: 314 RPQDLPREVLTTNPRRLSII---AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE 370

Query: 296 ----------FRK--RI---ILMLL---------KEVMEKLVD-------------TVHF 318
                     F     I   +L L+           V+ KL               ++  
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS 430

Query: 319 LHLEIHEAFGSADGDRPVKGSQNSHKKLGSAGLALHYANIVTQIDTLVSRSSSVPPNTRD 378
           ++LE+            ++     H+ +    +  HY NI    D+       +PP    
Sbjct: 431 IYLELK---------VKLENEYALHRSI----VD-HY-NIPKTFDS----DDLIPPYLDQ 471

Query: 379 ALYQGLPPTIKSALRS-KLQLFQVKEELTIQQIKAEMEKTLQWLVPIATNTTKSEMNRKP 437
             Y  +   +K+     ++ LF+    L  + ++ ++          A N + S +N   
Sbjct: 472 YFYSHIGHHLKNIEHPERMTLFR-MVFLDFRFLEQKIRHD-----STAWNASGSILN--- 522

Query: 438 VGTDLLRIETL--HHADKEKT-EAYILELVVWLHHLVSQARAGNVGIRSPVKSPIR 490
               L +++    +  D +   E  +  ++ +L       +     I S     +R
Sbjct: 523 ---TLQQLKFYKPYICDNDPKYERLVNAILDFLP------KIEENLICSKYTDLLR 569


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00