Citrus Sinensis ID: 046100

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---
Protein Sequence
MAESEEYPKDYYSNPTTRVSSSSSSSTTSVHVTALDGIVNVNSLFTIAVFVGLSLTTPGQHSLENPSACDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLINSKDVDEAFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSAVHAAAALIVLVSTALLAYISTAIYAFWH
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccEEEEEccccEEEccHHHHHHHHHHHcccccccccccccccccccHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccEEccccccccccHEHHHHHcccEEHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
maeseeypkdyysnpttrvsssssssttsVHVTALDGIVNVNSLFTIAVFVGlslttpgqhslenpsacdaGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLINSKDVDEAFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSAVHAAAALIVLVSTALLAYISTAIYAFWH
Flexible Loop (DISEMBL)
maeseeypkdyysnpttrvsssssssTTSVHVTALDGIVNVNSLFTIAVFVGLSLTTPGQHSLENPSACDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLINSKDVDEAFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSAVHAAAALIVLVSTALLAYISTAIYAFWH
Low Complexity Region (SEG)
MAESEEYPKDYYSNPttrvsssssssttsvhvtALDGIVNVNSLFTIAVFVGLSLTTPGQHSLENPSACDAGVDVAKKllvfevvsfsfflfsslvAQGLKLALNLINSKDVDEAFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSavhaaaalivlvSTALLAYISTAIYAFWH
Disordered region (IsUnstruct)
*****************************VHVTALDGIVNVNSLFTIAVFVGLSLTTPGQHSLENPSACDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLINSKDVDEAFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSAVHAAAALIVLVSTALLAYISTAIYAFW*
Disordered Region (DISOPRED)
*******************************VTALDGIVNVNSLFTIAVFVGLSLTT************DAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLINSKDVDEAFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSAVHAAAALIVLVSTALLAYISTAIYAFWH
Disordered Region (DISEMBL)
******************************HVTALDGIVNVNSLFTIAVFVGLSLTTPGQHSLENPSACDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLINSKDVDEAFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSAVHAAAALIVLVSTALLAYISTAIYAFWH
Disordered Region (DISPRO)
******YPKDYYSNPTTRVSSSSSSSTTSVHVTALDGIVNVNSLFTIAVFVGLSLTTPGQHSLENPSACDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLINSKDVDEAFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSAVHAAAALIVLVSTALLAYISTAIYAFWH
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAESEEYPKDYYSNPTTRVSSSSSSSTTSVHVTALDGIVNVNSLFTIAVFVGLSLTTPGQHSLENPSACDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLINSKDVDEAFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSAVHAAAALIVLVSTALLAYISTAIYAFWH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
225470397	194	PREDICTED: uncharacterized protein LOC10	0.974	0.969	0.783	9e-69
356527277	194	PREDICTED: uncharacterized protein LOC10	1.0	0.994	0.783	1e-68
449462445	197	PREDICTED: uncharacterized protein LOC10	0.994	0.974	0.823	2e-66
118483745	195	unknown [Populus trichocarpa]	1.0	0.989	0.8	2e-65
6041846	180	unknown protein [Arabidopsis thaliana]	0.849	0.911	0.835	1e-64
18397969	189	uncharacterized protein [Arabidopsis tha	0.849	0.867	0.835	1e-64
297833540	189	hypothetical protein ARALYDRAFT_478070 [	0.849	0.867	0.835	1e-64
224069693	191	predicted protein [Populus trichocarpa]	0.989	1.0	0.777	7e-64
356567714	196	PREDICTED: uncharacterized protein LOC10	1.0	0.984	0.831	1e-63
224129350	170	predicted protein [Populus trichocarpa]	0.880	1.0	0.823	4e-63

>gi|225470397|ref|XP_002273015.1| PREDICTED: uncharacterized protein LOC100246515 [Vitis vinifera] gi|359495402|ref|XP_003634982.1| PREDICTED: uncharacterized protein LOC100855266 [Vitis vinifera]

 Score =  265 bits (676), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 148/189 (78%), Positives = 168/189 (88%), Gaps = 1/189 (0%)

Query: 5   EEYPKDYYSNPTTRVSSSSSSSTTSVHVTALDGIVNVNSLFTIAVFVGLSLTTPGQHSLE 64
           E Y K+Y        SSS   STTSVHVTALDG+VNVNSLFTIAVFVGLSLTTP QHSLE
Sbjct: 7   EPYSKEY-DGRRIASSSSCPPSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPNQHSLE 65

Query: 65  NPSACDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLINSKDVDEAFRAHINLKV 124
           N + CDAG+DVA++LLVFEVVSFSFFLFSSL+AQGLKLA+NL+NSKDVD+AFRAHINLKV
Sbjct: 66  NRAGCDAGIDVARRLLVFEVVSFSFFLFSSLIAQGLKLAINLLNSKDVDDAFRAHINLKV 125

Query: 125 LRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSAVHAAAALIVLVSTALLAYI 184
           LRFGM G A+GSV+GCLFLMLS+VNVI+IRLG+LSCGS+SAVHA AAL+VLVS+AL+ YI
Sbjct: 126 LRFGMLGSAVGSVLGCLFLMLSMVNVIEIRLGLLSCGSRSAVHAVAALLVLVSSALVVYI 185

Query: 185 STAIYAFWH 193
           STA+YAF H
Sbjct: 186 STAVYAFMH 194

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527277|ref|XP_003532238.1| PREDICTED: uncharacterized protein LOC100801428 [Glycine max]

 Score =  264 bits (675), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 152/194 (78%), Positives = 167/194 (86%), Gaps = 1/194 (0%)

Query: 1   MAESEEYPKDYYSNPTTRVSSSSSSSTTSVHVT-ALDGIVNVNSLFTIAVFVGLSLTTPG 59
           M ESE+YPK+YY N  T     SSSS+T+     ALDG+VNVNSLFTIAVFVGLSLTTPG
Sbjct: 1   MDESEQYPKEYYPNDQTITRRVSSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPG 60

Query: 60  QHSLENPSACDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLINSKDVDEAFRAH 119
           Q SLEN S+CDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNL+NSKD DEAFRAH
Sbjct: 61  QRSLENRSSCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDADEAFRAH 120

Query: 120 INLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSAVHAAAALIVLVSTA 179
           INLK LR GM G AIGSVMGCLFL+LS+VNVI+IRLGMLSCGSK+A HA A ++VLVS+A
Sbjct: 121 INLKALRLGMLGSAIGSVMGCLFLVLSMVNVIEIRLGMLSCGSKAAAHAVATMVVLVSSA 180

Query: 180 LLAYISTAIYAFWH 193
           L+ YISTAIYAF  
Sbjct: 181 LVLYISTAIYAFTR 194

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462445|ref|XP_004148951.1| PREDICTED: uncharacterized protein LOC101219594 [Cucumis sativus] gi|449502060|ref|XP_004161532.1| PREDICTED: uncharacterized LOC101219594 [Cucumis sativus]

 Score =  256 bits (655), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 163/198 (82%), Positives = 176/198 (88%), Gaps = 6/198 (3%)

Query: 1   MAESEEYPKDYYSNPTTRVSS-----SSSSSTTSVHVTALDGIVNVNSLFTIAVFVGLSL 55
           M ESE YPKD++ N  +R        SSSSSTTSVHVTALDG+VNVNSLFTIAVFVGLSL
Sbjct: 1   MDESEAYPKDHF-NGRSRAEEIQRTSSSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 59

Query: 56  TTPGQHSLENPSACDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLINSKDVDEA 115
           TTPGQHSLEN S CDAG+DVA+KLLVFEVVSFSFFLFSSLVAQGLKLA+NL+NSKDVDEA
Sbjct: 60  TTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 119

Query: 116 FRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSAVHAAAALIVL 175
           FRAHINLKVLR GM   AIGSVMGCLFLMLS+V+VIQIRLGMLSCGSKSAVHA +AL+VL
Sbjct: 120 FRAHINLKVLRLGMLASAIGSVMGCLFLMLSMVDVIQIRLGMLSCGSKSAVHAVSALLVL 179

Query: 176 VSTALLAYISTAIYAFWH 193
           VS+ALL YISTAIYAF H
Sbjct: 180 VSSALLVYISTAIYAFLH 197

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118483745|gb|ABK93765.1| unknown [Populus trichocarpa]

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 156/195 (80%), Positives = 174/195 (89%), Gaps = 2/195 (1%)

Query: 1   MAESEEYPKD-YYS-NPTTRVSSSSSSSTTSVHVTALDGIVNVNSLFTIAVFVGLSLTTP 58
           MAES+ YPKD YYS N TTR SS SS STTSVHVTALDG+VNVNSLFTIAVFVGLSLTTP
Sbjct: 1   MAESDPYPKDSYYSENMTTRGSSRSSISTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTP 60

Query: 59  GQHSLENPSACDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLINSKDVDEAFRA 118
            Q SLEN ++CDA +DV + LLVFEVVSFSFFLFSSL+AQGLKLA+NL+NSKDVDEAFRA
Sbjct: 61  NQRSLENRTSCDASIDVERNLLVFEVVSFSFFLFSSLIAQGLKLAINLLNSKDVDEAFRA 120

Query: 119 HINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSAVHAAAALIVLVST 178
           HINLK LRFGM G AIGSV+GC+FLMLS++NVI+IRLGMLSCGSKS VHA  AL++LVS+
Sbjct: 121 HINLKALRFGMMGSAIGSVLGCVFLMLSMINVIEIRLGMLSCGSKSTVHAVTALVLLVSS 180

Query: 179 ALLAYISTAIYAFWH 193
           ALL YISTA+YAF H
Sbjct: 181 ALLVYISTAVYAFLH 195

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6041846|gb|AAF02155.1|AC009853_15 unknown protein [Arabidopsis thaliana]

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 137/164 (83%), Positives = 149/164 (90%)

Query: 30  VHVTALDGIVNVNSLFTIAVFVGLSLTTPGQHSLENPSACDAGVDVAKKLLVFEVVSFSF 89
           VHV+ALDG+VNVNSLFTIAVFVGLSL TPGQHSLE  S+CDA  DVAKKLLVFEVVSFSF
Sbjct: 17  VHVSALDGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKKLLVFEVVSFSF 76

Query: 90  FLFSSLVAQGLKLALNLINSKDVDEAFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVN 149
           FLFSSLVAQGLKLALNL+NSKDV+E FRAHIN+KVLR+GM   A+GSVMGCLFLMLS+VN
Sbjct: 77  FLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVMGCLFLMLSMVN 136

Query: 150 VIQIRLGMLSCGSKSAVHAAAALIVLVSTALLAYISTAIYAFWH 193
           VIQIRLG+LSCGSKSA  A A L+ LVS+ALL YISTAIYAFWH
Sbjct: 137 VIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAFWH 180

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18397969|ref|NP_566310.1| uncharacterized protein [Arabidopsis thaliana] gi|145331996|ref|NP_001078120.1| uncharacterized protein [Arabidopsis thaliana] gi|13877549|gb|AAK43852.1|AF370475_1 Unknown protein [Arabidopsis thaliana] gi|20148735|gb|AAM10258.1| unknown protein [Arabidopsis thaliana] gi|332641030|gb|AEE74551.1| uncharacterized protein [Arabidopsis thaliana] gi|332641031|gb|AEE74552.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 137/164 (83%), Positives = 149/164 (90%)

Query: 30  VHVTALDGIVNVNSLFTIAVFVGLSLTTPGQHSLENPSACDAGVDVAKKLLVFEVVSFSF 89
           VHV+ALDG+VNVNSLFTIAVFVGLSL TPGQHSLE  S+CDA  DVAKKLLVFEVVSFSF
Sbjct: 26  VHVSALDGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKKLLVFEVVSFSF 85

Query: 90  FLFSSLVAQGLKLALNLINSKDVDEAFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVN 149
           FLFSSLVAQGLKLALNL+NSKDV+E FRAHIN+KVLR+GM   A+GSVMGCLFLMLS+VN
Sbjct: 86  FLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVMGCLFLMLSMVN 145

Query: 150 VIQIRLGMLSCGSKSAVHAAAALIVLVSTALLAYISTAIYAFWH 193
           VIQIRLG+LSCGSKSA  A A L+ LVS+ALL YISTAIYAFWH
Sbjct: 146 VIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAFWH 189

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297833540|ref|XP_002884652.1| hypothetical protein ARALYDRAFT_478070 [Arabidopsis lyrata subsp. lyrata] gi|297330492|gb|EFH60911.1| hypothetical protein ARALYDRAFT_478070 [Arabidopsis lyrata subsp. lyrata]

 Score =  251 bits (640), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 137/164 (83%), Positives = 149/164 (90%)

Query: 30  VHVTALDGIVNVNSLFTIAVFVGLSLTTPGQHSLENPSACDAGVDVAKKLLVFEVVSFSF 89
           VHV+ALDG+VNVNSLFTIAVFVGLSL TPGQHSLE  S+CDA  DVAKKLLVFEVVSFSF
Sbjct: 26  VHVSALDGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKKLLVFEVVSFSF 85

Query: 90  FLFSSLVAQGLKLALNLINSKDVDEAFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVN 149
           FLFSSLVAQGLKLALNL+NSKDV+E FRAHIN+KVLR+GM   A+GSVMGCLFLMLS+VN
Sbjct: 86  FLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVMGCLFLMLSMVN 145

Query: 150 VIQIRLGMLSCGSKSAVHAAAALIVLVSTALLAYISTAIYAFWH 193
           VIQIRLG+LSCGSKSA  A A L+ LVS+ALL YISTAIYAFWH
Sbjct: 146 VIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAFWH 189

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069693|ref|XP_002303022.1| predicted protein [Populus trichocarpa] gi|222844748|gb|EEE82295.1| predicted protein [Populus trichocarpa]

 Score =  248 bits (634), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 150/193 (77%), Positives = 165/193 (85%), Gaps = 2/193 (1%)

Query: 1   MAESEEYPKDYYSNPTTRVSSSSSSSTTSVHVTALDGIVNVNSLFTIAVFVGLSLTTPGQ 60
           M E    PKD Y +  T  S   +SSTTSVHVTALDGIVNVNSLFT+AVFVGLSLTTP Q
Sbjct: 1   MDECSPCPKDSYHSENT--SPGVASSTTSVHVTALDGIVNVNSLFTVAVFVGLSLTTPNQ 58

Query: 61  HSLENPSACDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLINSKDVDEAFRAHI 120
            SLEN  +CDAG+D+AK LLVFEVVSFSFFLFSSLVAQGLKLA+NL+NSKDVD+AFRA I
Sbjct: 59  RSLENRISCDAGIDMAKNLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDDAFRARI 118

Query: 121 NLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSAVHAAAALIVLVSTAL 180
           NLKVLRFGM G AIGSVMGC+FLMLS+VNVIQIRLG+LSCGSKS VHA  AL++LVS+AL
Sbjct: 119 NLKVLRFGMMGSAIGSVMGCVFLMLSMVNVIQIRLGLLSCGSKSTVHAVTALVLLVSSAL 178

Query: 181 LAYISTAIYAFWH 193
           L YISTA YAF H
Sbjct: 179 LVYISTAFYAFLH 191

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567714|ref|XP_003552062.1| PREDICTED: uncharacterized protein LOC100802538 [Glycine max]

 Score =  247 bits (631), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 163/196 (83%), Positives = 177/196 (90%), Gaps = 3/196 (1%)

Query: 1   MAESEEYPKDYYSNPTT---RVSSSSSSSTTSVHVTALDGIVNVNSLFTIAVFVGLSLTT 57
           M ESE+YPK+YY N  T   RVSSSSSSSTTSVHVTALDG+VNVNSLFTIAVFVGLSLTT
Sbjct: 1   MDESEQYPKEYYPNDQTLTRRVSSSSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTT 60

Query: 58  PGQHSLENPSACDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLINSKDVDEAFR 117
           PGQ SLEN S+CDA VDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNL+NSKD DEAFR
Sbjct: 61  PGQRSLENRSSCDADVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDADEAFR 120

Query: 118 AHINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSAVHAAAALIVLVS 177
           AHINL+ LR GM G AIGSVMGCLFL+LS+VNVI+IRLGMLSCGSK+A HA AA++VLVS
Sbjct: 121 AHINLRALRLGMLGSAIGSVMGCLFLVLSMVNVIEIRLGMLSCGSKAAAHAVAAMVVLVS 180

Query: 178 TALLAYISTAIYAFWH 193
           +AL+ YISTAIYAF H
Sbjct: 181 SALVLYISTAIYAFTH 196

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129350|ref|XP_002320565.1| predicted protein [Populus trichocarpa] gi|222861338|gb|EEE98880.1| predicted protein [Populus trichocarpa]

 Score =  246 bits (628), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 140/170 (82%), Positives = 155/170 (91%)

Query: 24  SSSTTSVHVTALDGIVNVNSLFTIAVFVGLSLTTPGQHSLENPSACDAGVDVAKKLLVFE 83
           S STTSVHVTALDG+VNVNSLFTIAVFVGLSLTTP Q SLEN ++CDA +DV K LLVFE
Sbjct: 1   SISTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPNQRSLENRTSCDASIDVEKNLLVFE 60

Query: 84  VVSFSFFLFSSLVAQGLKLALNLINSKDVDEAFRAHINLKVLRFGMTGCAIGSVMGCLFL 143
           VVSFSFFLFSSL+AQGLKLA+NL+NSKDVDEAFRAHINLK LRFGM G AIGSVMGC+FL
Sbjct: 61  VVSFSFFLFSSLIAQGLKLAINLLNSKDVDEAFRAHINLKALRFGMMGSAIGSVMGCVFL 120

Query: 144 MLSIVNVIQIRLGMLSCGSKSAVHAAAALIVLVSTALLAYISTAIYAFWH 193
           MLS++NVI+IRLGMLSCGSKS VHA  AL++LVS+ALL YISTA+YAF H
Sbjct: 121 MLSMINVIEIRLGMLSCGSKSTVHAVTALVLLVSSALLVYISTAVYAFLH 170

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
TAIR|locus:2079666	189	AT3G07510 "AT3G07510" [Arabido	0.829	0.846	0.687	3.5e-52
TAIR|locus:2153689	175	MEE60 "AT5G05950" [Arabidopsis	0.818	0.902	0.375	1.7e-20
TAIR|locus:2102742	204	AT3G46890 "AT3G46890" [Arabido	0.398	0.377	0.333	1.7e-07

TAIR|locus:2079666 AT3G07510 "AT3G07510" [Arabidopsis thaliana (taxid:3702)]

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 110/160 (68%), Positives = 120/160 (75%)

Query:    34 ALDGIVNVNSLFTIAVFVGLSLTTPGQHSLENPSACDAGVDVAKKXXXXXXXXXXXXXXX 93
             ALDG+VNVNSLFTIAVFVGLSL TPGQHSLE  S+CDA  DVAKK               
Sbjct:    30 ALDGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKKLLVFEVVSFSFFLFS 89

Query:    94 XXXAQGLKLALNLINSKDVDEAFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQI 153
                AQGLKLALNL+NSKDV+E FRAHIN+KVLR+GM   A+GSVMGCLFLMLS+VNVIQI
Sbjct:    90 SLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVMGCLFLMLSMVNVIQI 149

Query:   154 RLGMLSCGSKSXXXXXXXXXXXXSTALLAYISTAIYAFWH 193
             RLG+LSCGSKS            S+ALL YISTAIYAFWH
Sbjct:   150 RLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAFWH 189

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2153689 MEE60 "AT5G05950" [Arabidopsis thaliana (taxid:3702)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 62/165 (37%), Positives = 83/165 (50%)

Query:    34 ALDGIVNVNSLFTIAVFVGLSLT-TPGQHSLENPSACDAGVDVAKKXXXXXXXXXXXXXX 92
             ALDGIVNVNSLFT+AVF+GL+   T   +SL     C     +A+               
Sbjct:     9 ALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVYSFASFLF 68

Query:    93 XXXXAQGLKLA--LNLINSKDVDEAFRA---HINLKVLRFGMTGCAIGSVMGCLFLMLSI 147
                 A GLK A  LN+ +S  +         ++N   LRFGM    +GSV GC FLML++
Sbjct:    69 SSLIALGLKQAMRLNIASSFHISTRIDPVVYYVNKTALRFGMVTSGLGSVCGCGFLMLAL 128

Query:   148 VNVIQIRLGMLSCGSKSXXXXXXX-XXXXXSTALLAYISTAIYAF 191
             +NV+QI+LG L CG+                +AL  Y+S  +YAF
Sbjct:   129 INVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLYAF 173

GO:0003674 "molecular_function" evidence=ND

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

TAIR|locus:2102742 AT3G46890 "AT3G46890" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 1.7e-07, P = 1.7e-07
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query:   115 AFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCG-SKSXXXXXXXXX 173
             A    +NL  LR G+    + SV+GC FL +++V+++QI+LG L C  S           
Sbjct:   125 AGEGRVNLAALRVGIVASCVASVLGCGFLTMALVDLVQIKLGPLECKRSFHALAAIVPLV 184

Query:   174 XXXSTALLAYISTAIYAF 191
                 +AL+ Y+   +YAF
Sbjct:   185 VLVPSALIIYVFLVLYAF 202


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      193       145   0.00071  103 3  11 22  0.42    31
                                                     30  0.49    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  566 (60 KB)
  Total size of DFA:  122 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.09u 0.19s 10.28t   Elapsed:  00:00:01
  Total cpu time:  10.09u 0.19s 10.28t   Elapsed:  00:00:01
  Start:  Fri May 10 20:25:07 2013   End:  Fri May 10 20:25:08 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00009767001 SubName- Full=Chromosome undetermined scaffold_248, whole genome shotgun sequence; (194 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00