Citrus Sinensis ID: 046320
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 198 | ||||||
| 224061605 | 441 | predicted protein [Populus trichocarpa] | 0.979 | 0.439 | 0.598 | 1e-67 | |
| 224122154 | 441 | predicted protein [Populus trichocarpa] | 0.974 | 0.437 | 0.592 | 3e-66 | |
| 255564978 | 479 | histidinol dehydrogenase, putative [Rici | 0.979 | 0.405 | 0.594 | 4e-66 | |
| 356555910 | 471 | PREDICTED: histidinol dehydrogenase, chl | 0.969 | 0.407 | 0.590 | 8e-66 | |
| 359493020 | 562 | PREDICTED: histidinol dehydrogenase, chl | 0.979 | 0.345 | 0.573 | 2e-65 | |
| 296088118 | 546 | unnamed protein product [Vitis vinifera] | 0.979 | 0.355 | 0.573 | 3e-65 | |
| 449435520 | 490 | PREDICTED: histidinol dehydrogenase, chl | 0.974 | 0.393 | 0.563 | 1e-64 | |
| 449488538 | 490 | PREDICTED: histidinol dehydrogenase, chl | 0.974 | 0.393 | 0.563 | 1e-64 | |
| 217075801 | 478 | unknown [Medicago truncatula] | 0.969 | 0.401 | 0.582 | 2e-64 | |
| 357448555 | 478 | Histidinol dehydrogenase [Medicago trunc | 0.969 | 0.401 | 0.582 | 2e-64 |
| >gi|224061605|ref|XP_002300563.1| predicted protein [Populus trichocarpa] gi|222847821|gb|EEE85368.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/239 (59%), Positives = 167/239 (69%), Gaps = 45/239 (18%)
Query: 1 AEKIFGPGNKYVTAAKMILQLQFFPAILKKSHDKVQTAQVLVIADRYPSPLHVAADLLSQ 60
AEKIFGPGN+YVTAAKMILQ A++ ++VLVIADRY SP+H+AADLLSQ
Sbjct: 204 AEKIFGPGNQYVTAAKMILQNS--EAMISIDM-PAGPSEVLVIADRYASPVHIAADLLSQ 260
Query: 61 --RGPDSQGVLVIVGDGVDIKAIEEEIRMQCQSLP-----------NFMVFAREIMRAIT 107
GPDSQ VLV+ GDGVD+KAIEEEI QCQSLP +F VFAR+++ A++
Sbjct: 261 AEHGPDSQVVLVVAGDGVDMKAIEEEISKQCQSLPRGEYASKALSHSFTVFARDMVEAVS 320
Query: 108 FSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPES-----------------ARMY 150
FSNLYAPEHLI++ K+ EKWES IENAGS+ G WTPES ARMY
Sbjct: 321 FSNLYAPEHLIINVKEAEKWESFIENAGSVFLGPWTPESVGDYASGTNHVLPTYGYARMY 380
Query: 151 GGVSLDSFLKYVTVQSL------------ATMAEIEGLEAHKRAITLRLQDIAARQVSS 197
GGVSLDSF KY+TVQSL ATMAE+EGL+AHKRA+TLRLQDI ARQVS+
Sbjct: 381 GGVSLDSFQKYMTVQSLTEEGLRKLGPYVATMAEVEGLDAHKRAVTLRLQDIEARQVSN 439
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224122154|ref|XP_002330554.1| predicted protein [Populus trichocarpa] gi|222872112|gb|EEF09243.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255564978|ref|XP_002523482.1| histidinol dehydrogenase, putative [Ricinus communis] gi|223537310|gb|EEF38941.1| histidinol dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356555910|ref|XP_003546272.1| PREDICTED: histidinol dehydrogenase, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|359493020|ref|XP_002264907.2| PREDICTED: histidinol dehydrogenase, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|296088118|emb|CBI35507.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449435520|ref|XP_004135543.1| PREDICTED: histidinol dehydrogenase, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449488538|ref|XP_004158076.1| PREDICTED: histidinol dehydrogenase, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|217075801|gb|ACJ86260.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357448555|ref|XP_003594553.1| Histidinol dehydrogenase [Medicago truncatula] gi|355483601|gb|AES64804.1| Histidinol dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 198 | ||||||
| TAIR|locus:2163946 | 466 | HDH "histidinol dehydrogenase" | 0.732 | 0.311 | 0.546 | 2.9e-52 | |
| ASPGD|ASPL0000057819 | 867 | AN0797 [Emericella nidulans (t | 0.757 | 0.173 | 0.378 | 5e-26 | |
| UNIPROTKB|Q9F854 | 431 | hisD "Histidinol dehydrogenase | 0.737 | 0.338 | 0.335 | 8e-25 | |
| TIGR_CMR|VC_1133 | 431 | VC_1133 "histidinol dehydrogen | 0.737 | 0.338 | 0.335 | 8e-25 | |
| UNIPROTKB|G4MYK1 | 865 | MGG_01309 "Histidine biosynthe | 0.762 | 0.174 | 0.386 | 1.1e-24 | |
| TIGR_CMR|CPS_3890 | 434 | CPS_3890 "histidinol dehydroge | 0.732 | 0.334 | 0.362 | 2.1e-21 | |
| POMBASE|SPBC1711.13 | 439 | his2 "histidinol dehydrogenase | 0.737 | 0.332 | 0.358 | 4e-21 | |
| UNIPROTKB|P06988 | 434 | hisD "HisD" [Escherichia coli | 0.732 | 0.334 | 0.333 | 8.4e-20 | |
| TIGR_CMR|CJE_1770 | 428 | CJE_1770 "histidinol dehydroge | 0.732 | 0.338 | 0.339 | 3e-19 | |
| CGD|CAL0000622 | 838 | HIS4 [Candida albicans (taxid: | 0.742 | 0.175 | 0.347 | 1.2e-18 |
| TAIR|locus:2163946 HDH "histidinol dehydrogenase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 386 (140.9 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 89/163 (54%), Positives = 108/163 (66%)
Query: 2 EKIFGPGNKYVTAAKMILQLQFFPAILKKSHDK-VQTAQVLVIADRYPSPLHVAADLLSQ 60
EKIFGPGN+YVTAAKMILQ A++ S D ++VLVIAD + SP+++AADLLSQ
Sbjct: 233 EKIFGPGNQYVTAAKMILQNS--EAMV--SIDMPAGPSEVLVIADEHASPVYIAADLLSQ 288
Query: 61 --RGPDSQXXXXXXXXXXXXKAIEEEIRMQCQSLP-----------NFMVFAREIMRAIT 107
GPDSQ AIEEEI QC+SLP +F VFAR+++ AI+
Sbjct: 289 AEHGPDSQVVLVVVGDSVDLNAIEEEIAKQCKSLPRGEFASKALSHSFTVFARDMIEAIS 348
Query: 108 FSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPESARMY 150
FSNLYAPEHLI++ KD EKWE +IENAGS+ G WTPES Y
Sbjct: 349 FSNLYAPEHLIINVKDAEKWEGLIENAGSVFIGPWTPESVGDY 391
|
|
| ASPGD|ASPL0000057819 AN0797 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9F854 hisD "Histidinol dehydrogenase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|VC_1133 VC_1133 "histidinol dehydrogenase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4MYK1 MGG_01309 "Histidine biosynthesis trifunctional protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|CPS_3890 CPS_3890 "histidinol dehydrogenase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPBC1711.13 his2 "histidinol dehydrogenase His2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P06988 hisD "HisD" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|CJE_1770 CJE_1770 "histidinol dehydrogenase" [Campylobacter jejuni RM1221 (taxid:195099)] | Back alignment and assigned GO terms |
|---|
| CGD|CAL0000622 HIS4 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 198 | |||
| PLN02926 | 431 | PLN02926, PLN02926, histidinol dehydrogenase | 1e-81 | |
| pfam00815 | 413 | pfam00815, Histidinol_dh, Histidinol dehydrogenase | 2e-54 | |
| cd06572 | 390 | cd06572, Histidinol_dh, Histidinol dehydrogenase, | 3e-50 | |
| PRK00877 | 425 | PRK00877, hisD, bifunctional histidinal dehydrogen | 8e-48 | |
| TIGR00069 | 393 | TIGR00069, hisD, histidinol dehydrogenase | 9e-48 | |
| COG0141 | 425 | COG0141, HisD, Histidinol dehydrogenase [Amino aci | 6e-43 | |
| PRK12447 | 426 | PRK12447, PRK12447, histidinol dehydrogenase; Revi | 4e-21 | |
| PRK13770 | 416 | PRK13770, PRK13770, histidinol dehydrogenase; Prov | 4e-09 |
| >gnl|CDD|215500 PLN02926, PLN02926, histidinol dehydrogenase | Back alignment and domain information |
|---|
Score = 248 bits (635), Expect = 1e-81
Identities = 130/237 (54%), Positives = 151/237 (63%), Gaps = 58/237 (24%)
Query: 2 EKIFGPGNKYVTAAKMILQLQFFPAILKKSHDKVQT------AQVLVIADRYPSPLHVAA 55
+KIFGPGN+YVTAAKMILQ S V ++VLVIAD+ +P+HVAA
Sbjct: 205 DKIFGPGNQYVTAAKMILQ---------NSEAMVSIDMPAGPSEVLVIADKTANPVHVAA 255
Query: 56 DLLSQ--RGPDSQGVLVIVGDGVDIKAIEEEIRMQCQSLP-----------NFMVFAREI 102
DLLSQ GPDSQ VLV VGD VD+ AIEEE+ QCQSLP +F+V AR++
Sbjct: 256 DLLSQAEHGPDSQVVLVAVGD-VDLDAIEEEVEKQCQSLPRGEIASKALGHSFIVVARDM 314
Query: 103 MRAITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPES---------------- 146
AI+FSNLYAPEHLIV+ +D E W I+NAGS+ G WTPES
Sbjct: 315 AEAISFSNLYAPEHLIVNVEDAESWLDKIDNAGSVFLGRWTPESVGDYASGTNHVLPTYG 374
Query: 147 -ARMYGGVSLDSFLKYVTVQSL------------ATMAEIEGLEAHKRAITLRLQDI 190
ARMYGGVSLDSFLKY+TVQSL A MAE+EGLEAHKRA+TLRL DI
Sbjct: 375 YARMYGGVSLDSFLKYMTVQSLTEEGLQNLGPYVARMAEVEGLEAHKRAVTLRLGDI 431
|
Length = 431 |
| >gnl|CDD|216133 pfam00815, Histidinol_dh, Histidinol dehydrogenase | Back alignment and domain information |
|---|
| >gnl|CDD|119329 cd06572, Histidinol_dh, Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
| >gnl|CDD|234853 PRK00877, hisD, bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|232808 TIGR00069, hisD, histidinol dehydrogenase | Back alignment and domain information |
|---|
| >gnl|CDD|223219 COG0141, HisD, Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|237103 PRK12447, PRK12447, histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|172308 PRK13770, PRK13770, histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 198 | |||
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 100.0 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 100.0 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 100.0 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 100.0 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 100.0 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 100.0 | |
| PLN02926 | 431 | histidinol dehydrogenase | 100.0 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 100.0 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 100.0 | |
| KOG2697 | 446 | consensus Histidinol dehydrogenase [Amino acid tra | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 95.53 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 93.37 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 92.97 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 90.92 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 90.79 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 90.73 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 90.69 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 90.57 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 90.39 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 89.97 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 89.11 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 88.58 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 88.02 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 87.95 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 87.91 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 87.9 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 87.72 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 87.31 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 87.27 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 87.23 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 87.13 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 86.32 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 86.14 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 85.51 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 85.29 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 85.21 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 85.11 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 84.97 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 84.81 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 84.53 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 84.51 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 84.28 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 83.94 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 82.76 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 82.58 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 82.35 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 81.76 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 81.61 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 80.88 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 80.87 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 80.79 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 80.71 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 80.25 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 80.07 |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-75 Score=536.25 Aligned_cols=182 Identities=43% Similarity=0.661 Sum_probs=178.1
Q ss_pred CcEEecCCcHHHHHHHHHhhcccccccccccCc-cCCcceEEEEeCCCCCHHHHHHHHhhc--cCCCCceEEEecCchHh
Q 046320 1 AEKIFGPGNKYVTAAKMILQLQFFPAILKKSHD-KVQTAQVLVIADRYPSPLHVAADLLSQ--RGPDSQGVLVIVGDGVD 77 (198)
Q Consensus 1 VDkIvGPGN~yV~~AK~~v~~~~~~~~V~~gID-~AGPSEvlViAD~tAnp~~vAaDLLaQ--Hdp~a~avLvt~~~~l~ 77 (198)
||||+||||+|||+|||+|+|. | ||| +|||||++||||+++||+|||+||||| |||+|++||||+|++++
T Consensus 199 VdkIvGPGN~yVtaAKr~v~g~-----V--~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd~~a~aiLvT~s~~la 271 (425)
T COG0141 199 VDKIVGPGNAYVTAAKRLVSGV-----V--GIDMIAGPSEVLVIADETANPDFVAADLLSQAEHDPDAQAILVTDSEELA 271 (425)
T ss_pred cCeeeCCCcHHHHHHHHHhhCC-----c--ccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhcCCCceEEEEeCcHHHH
Confidence 8999999999999999999885 8 999 999999999999999999999999999 99999999999999995
Q ss_pred HHHHHHHHHHHHhhCC------------ceEEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccchhcccccCCCCcc
Q 046320 78 IKAIEEEIRMQCQSLP------------NFMVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPE 145 (198)
Q Consensus 78 ~~~V~~~i~~~l~~l~------------g~iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~nAGsiFlG~~tp~ 145 (198)
++|.++|++||+.+| |.||+++|++||++++|+||||||+|+++||++++++|+|||+||||+|||+
T Consensus 272 -~~v~~~v~~~l~~l~~~ei~~~~l~~~g~iilv~~l~ea~~~~N~~APEHLei~~~~p~~~l~~I~nAGsIFlG~~sPe 350 (425)
T COG0141 272 -EAVEAAVERQLETLPRAEIARKALENYGAIILVDDLDEAVEISNEYAPEHLELQTENPRELLGKIRNAGSIFLGHYSPE 350 (425)
T ss_pred -HHHHHHHHHHHHhccHHHHHHHHHHhCCeEEEECCHHHHHHHHHhhChHhhhhhhcCHHHHHHHhcccceeeecCCCCc
Confidence 999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred c-----------------cccccCCccccccccchHHHH------------HHHHHhhCCHHHHHHHHHHHHhh
Q 046320 146 S-----------------ARMYGGVSLDSFLKYVTVQSL------------ATMAEIEGLEAHKRAITLRLQDI 190 (198)
Q Consensus 146 a-----------------AR~~sgLsv~~FlK~~s~~~~------------~~lA~~EGL~aHa~si~~R~~~~ 190 (198)
+ |||+|||||+||+|++|+++| .+||++|||++|++|++.|++++
T Consensus 351 ~~GDY~aG~NHVLPT~g~AR~~s~L~v~dF~K~~tv~~~~~~~~~~l~~~~~~LA~~EgL~aHa~av~~R~~~~ 424 (425)
T COG0141 351 SLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSTVQELSEEGLARLAETVITLAEAEGLTAHAEAVRIRLERL 424 (425)
T ss_pred cccccccCCCccCCCCccchhcCCccHHHhhhHHHHHHcCHHHHHHhHHHHHHHHHhcCcHHHHHHHHHHHhcc
Confidence 9 999999999999999999999 89999999999999999999764
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >KOG2697 consensus Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 198 | ||||
| 1kae_A | 434 | L-Histidinol Dehydrogenase (Hisd) Structure Complex | 3e-22 | ||
| 1k75_A | 434 | The L-Histidinol Dehydrogenase (Hisd) Structure Imp | 3e-22 | ||
| 4gic_A | 423 | Crystal Structure Of A Putative Histidinol Dehydrog | 1e-05 |
| >pdb|1KAE|A Chain A, L-Histidinol Dehydrogenase (Hisd) Structure Complexed With L- Histidinol (Substrate), Zinc And Nad (Cofactor) Length = 434 | Back alignment and structure |
|
| >pdb|1K75|A Chain A, The L-Histidinol Dehydrogenase (Hisd) Structure Implicates Domain Swapping And Gene Duplication. Length = 434 | Back alignment and structure |
| >pdb|4GIC|A Chain A, Crystal Structure Of A Putative Histidinol Dehydrogenase (Target Psi- 014034) From Methylococcus Capsulatus Length = 423 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 198 | |||
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 3e-57 |
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A Length = 434 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 3e-57
Identities = 74/237 (31%), Positives = 109/237 (45%), Gaps = 54/237 (22%)
Query: 3 KIFGPGNKYVTAAKMILQLQF-FPAILKKSHDKVQTA---QVLVIADRYPSPLHVAADLL 58
KIFGPGN +VT AK + + AI D A +VLVIAD +P VA+DLL
Sbjct: 205 KIFGPGNAFVTEAKRQVSQRLDGAAI-----DMP--AGPSEVLVIADSGATPDFVASDLL 257
Query: 59 SQ--RGPDSQGVLVIVGDGVDIKAIEEEIRMQCQSLP-----------NFMVFAREIMRA 105
SQ GPDSQ +L+ + + + E + Q LP + ++ +++ +
Sbjct: 258 SQAEHGPDSQVILLTPAADM-ARRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQC 316
Query: 106 ITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPES-----------------AR 148
+ SN Y PEHLI+ ++ + I +AGS+ G+W+PES
Sbjct: 317 VEISNQYGPEHLIIQTRNARELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTA 376
Query: 149 MYGGVSLDSFLKYVTVQSL------------ATMAEIEGLEAHKRAITLRLQDIAAR 193
+ L F K +TVQ L T+A E L AHK A+TLR+ + +
Sbjct: 377 TCSSLGLADFQKRMTVQELSKEGFSALASTIETLAAAERLTAHKNAVTLRVNALKEQ 433
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 198 | |||
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 91.9 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 91.5 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 91.38 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 91.13 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 90.81 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 90.77 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 90.76 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 90.57 | |
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 89.66 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 89.57 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 89.41 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 89.38 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 89.01 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 88.89 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 88.79 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 88.26 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 87.92 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 87.54 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 87.15 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 85.37 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 84.32 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 83.28 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 82.86 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 82.85 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 81.93 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 80.9 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 80.69 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 80.55 |
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-75 Score=540.66 Aligned_cols=182 Identities=39% Similarity=0.642 Sum_probs=177.1
Q ss_pred CcEEecCCcHHHHHHHHHh---hcccccccccccCc-cCCcceEEEEeCCCCCHHHHHHHHhhc--cCCCCceEEEecCc
Q 046320 1 AEKIFGPGNKYVTAAKMIL---QLQFFPAILKKSHD-KVQTAQVLVIADRYPSPLHVAADLLSQ--RGPDSQGVLVIVGD 74 (198)
Q Consensus 1 VDkIvGPGN~yV~~AK~~v---~~~~~~~~V~~gID-~AGPSEvlViAD~tAnp~~vAaDLLaQ--Hdp~a~avLvt~~~ 74 (198)
||||+||||+||++|||+| +|. | ||| +|||||++||||++|||+|||+||||| |||+|++||||+|+
T Consensus 203 VDkI~GPGN~yVa~AKr~Vs~~~G~-----V--gIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd~~a~aiLvT~s~ 275 (434)
T 1kae_A 203 VDKIFGPGNAFVTEAKRQVSQRLDG-----A--AIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPAA 275 (434)
T ss_dssp CSEEECCCCHHHHHHHHHHHHCTTS-----C--EESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCTTCEEEEEESCH
T ss_pred ccEEECCCcHHHHHHHHHhHhhcCc-----c--ccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCCCCcEEEEECCH
Confidence 8999999999999999999 774 9 999 999999999999999999999999999 99999999999999
Q ss_pred hHhHHHHHHHHHHHHhhCC-----------ceEEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccchhcccccCCCC
Q 046320 75 GVDIKAIEEEIRMQCQSLP-----------NFMVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWT 143 (198)
Q Consensus 75 ~l~~~~V~~~i~~~l~~l~-----------g~iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~nAGsiFlG~~t 143 (198)
+++ ++|.++|++||+.|| ..+|+|+|++||++++|+||||||+|+++||++++++|||||+||||+||
T Consensus 276 ~la-~~V~~ev~~ql~~lpr~~ia~~sl~~~~ii~v~~l~ea~~~~N~~APEHLel~~~dp~~~l~~I~nAGaIFlG~~t 354 (434)
T 1kae_A 276 DMA-RRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQCVEISNQYGPEHLIIQTRNARELVDSITSAGSVFLGDWS 354 (434)
T ss_dssp HHH-HHHHHHHHHHHTTCTTHHHHHHHHTTCEEEECSSHHHHHHHHHHHCCSEEEEESTTHHHHGGGCCSCSEEEESTTC
T ss_pred HHH-HHHHHHHHHHHHhCChHHHHHHHHHcCeEEEECCHHHHHHHHHHhhhHhhhhhhcCHHHHHhhcCcccchhcCCCC
Confidence 995 999999999999999 46899999999999999999999999999999999999999999999999
Q ss_pred ccc-----------------cccccCCccccccccchHHHH------------HHHHHhhCCHHHHHHHHHHHHhh
Q 046320 144 PES-----------------ARMYGGVSLDSFLKYVTVQSL------------ATMAEIEGLEAHKRAITLRLQDI 190 (198)
Q Consensus 144 p~a-----------------AR~~sgLsv~~FlK~~s~~~~------------~~lA~~EGL~aHa~si~~R~~~~ 190 (198)
|++ |||+|||||+||||++|+|+| .+||++|||++|++|++.|++++
T Consensus 355 pe~~GDY~aG~NHvLPT~G~AR~~sgLsV~~F~K~~s~~~~s~~~l~~l~~~~~~lA~~EGL~aHa~av~~R~~~~ 430 (434)
T 1kae_A 355 PESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELSKEGFSALASTIETLAAAERLTAHKNAVTLRVNAL 430 (434)
T ss_dssp CHHHHHHTSSSCCCCCCTTGGGTCCCSCGGGGEEEEEEEEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chhhcccccCCCcccCCCCceeccCCCcHHhccceeeEEEECHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHh
Confidence 999 999999999999999999998 89999999999999999999865
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 198 | ||||
| d1k75a_ | 431 | c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Esc | 6e-24 |
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} Length = 431 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Score = 95.5 bits (237), Expect = 6e-24
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 44/231 (19%)
Query: 1 AEKIFGPGNKYVTAAKMILQLQFFPAILKKSHDKVQTAQVLVIADRYPSPLHVAADLLSQ 60
+KIFGPGN +VT AK + + A + ++VLVIAD +P VA+DLLSQ
Sbjct: 200 VDKIFGPGNAFVTEAKRQVSQRLDGAAIDMP---AGPSEVLVIADSGATPDFVASDLLSQ 256
Query: 61 RGPDSQGVLVIVGDGVD------------IKAIEEEIRMQCQSLPNFMVFAREIMRAITF 108
++++ D + + + + ++ +++ + +
Sbjct: 257 AEHGPDSQVILLTPAADMARRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQCVEI 316
Query: 109 SNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPES-----------------ARMYG 151
SN Y PEHLI+ ++ + I +AGS+ G+W+PES
Sbjct: 317 SNQYGPEHLIIQTRNARELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCS 376
Query: 152 GVSLDSFLKYVTVQSL------------ATMAEIEGLEAHKRAITLRLQDI 190
+ L F K +TVQ L T+A E L AHK A+TLR+ +
Sbjct: 377 SLGLADFQKRMTVQELSKEGFSALASTIETLAAAERLTAHKNAVTLRVNAL 427
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 198 | |||
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 93.83 | |
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 93.46 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 93.21 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 93.17 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 91.34 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 90.32 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 90.1 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 89.96 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 88.57 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 84.3 |
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.1e-73 Score=523.82 Aligned_cols=188 Identities=38% Similarity=0.631 Sum_probs=179.6
Q ss_pred CcEEecCCcHHHHHHHHHhhcccccccccccCc-cCCcceEEEEeCCCCCHHHHHHHHhhc--cCCCCceEEEecCchHh
Q 046320 1 AEKIFGPGNKYVTAAKMILQLQFFPAILKKSHD-KVQTAQVLVIADRYPSPLHVAADLLSQ--RGPDSQGVLVIVGDGVD 77 (198)
Q Consensus 1 VDkIvGPGN~yV~~AK~~v~~~~~~~~V~~gID-~AGPSEvlViAD~tAnp~~vAaDLLaQ--Hdp~a~avLvt~~~~l~ 77 (198)
|||||||||.||++|||+|+|.. +.| ||| +|||||++||||+++||+|+|+||||| |||+|++||||+|++++
T Consensus 200 VdkI~GPGN~yV~~AK~~v~g~~--~~v--gID~~aGPSEv~viAD~~a~p~~iAaDllaQAEH~~~a~~ilvt~~~~l~ 275 (431)
T d1k75a_ 200 VDKIFGPGNAFVTEAKRQVSQRL--DGA--AIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPAADMA 275 (431)
T ss_dssp CSEEECCCSHHHHHHHHHHHHST--TSC--EESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCTTCEEEEEESCHHHH
T ss_pred cceeecCCchhhhhhHHhhcccC--Ccc--ccccccCCceEEEEecCCCCHHHHHHHHHhccCCcccceeEEEeccHHHH
Confidence 89999999999999999997631 128 999 999999999999999999999999999 99999999999999995
Q ss_pred HHHHHHHHHHHHhhCC-----------ceEEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccchhcccccCCCCccc
Q 046320 78 IKAIEEEIRMQCQSLP-----------NFMVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPES 146 (198)
Q Consensus 78 ~~~V~~~i~~~l~~l~-----------g~iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~nAGsiFlG~~tp~a 146 (198)
++|.++|++||+.+| +++++|+|++||++++|+||||||+|+++||++++++|+|||+||||+|||++
T Consensus 276 -~~v~~~i~~~l~~l~r~~i~~~s~~~~~ii~v~~~~ea~~~~N~~APEHL~l~~~~~~~~~~~i~nAGsIflG~~sp~a 354 (431)
T d1k75a_ 276 -RRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQCVEISNQYGPEHLIIQTRNARELVDSITSAGSVFLGDWSPES 354 (431)
T ss_dssp -HHHHHHHHHHHHTCSSCHHHHHHHTTCEEEECSSHHHHHHHHHHHCCSEEEEESTTHHHHGGGCCCCSEEEESTTCCHH
T ss_pred -HHHHHHHHHHhhhchHHHHHHhhhccceEEEecCHHHHHHHHHhhhHHHHHHHhcCHHHHHhhhhhcchhhcCCCCcch
Confidence 999999999999999 67999999999999999999999999999999999999999999999999999
Q ss_pred -----------------cccccCCccccccccchHHHH------------HHHHHhhCCHHHHHHHHHHHHhhhhh
Q 046320 147 -----------------ARMYGGVSLDSFLKYVTVQSL------------ATMAEIEGLEAHKRAITLRLQDIAAR 193 (198)
Q Consensus 147 -----------------AR~~sgLsv~~FlK~~s~~~~------------~~lA~~EGL~aHa~si~~R~~~~~~~ 193 (198)
|||+|||||+||||++|++++ .+||++|||++|++|++.|+++++.+
T Consensus 355 ~GDY~aGpnHvLPT~G~Ar~~sgLsv~dF~k~~s~~~~s~~~~~~l~~~~~~lA~~Egl~aHa~sv~~Rl~~~~~~ 430 (431)
T d1k75a_ 355 AGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELSKEGFSALASTIETLAAAERLTAHKNAVTLRVNALKEQ 430 (431)
T ss_dssp HHHHTSSSCCCCCCTTGGGTCCCCCGGGGEEEEEEEEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hhccccCCCccCCCCCceeecCCCCHHHeeeeeeEEEECHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhc
Confidence 999999999999999999988 89999999999999999999987654
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|