Citrus Sinensis ID: 046391

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170------
Protein Sequence
GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDENLDWRSPLH
Secondary Structure (PSIPRED)
cccHHHHHHHHHccEEEEEEEEccccEEEEEEEccHHHHHcccccccEEEEEEEEEEEEcccEEEEEEEcEEEEEEEccccccEEEEEEcccccccccccccEEEEEcccEEEEEEEEcccccccccEEEEEEEEEEEEEEEEccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHccEEEccEEEccccEEEEEEEccHHHHHHccccccEEEEEEEEEEEcccccEEEEEEcccEEEEEccccccEEEEEEcHccHHccccccEEEEEccccEEEEEEEccccccccccccEEEEEEEEEEEEEccccccccccccHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
GLDPIAVASVFSTAQYmgekrisdIDCFVLKLAAnqtdladrsdSTAEMIKHVIFGYFSQRSGLLVYLEdsyltriqspgslptywETTMATKIEDYRAIEGVmiahsgqsSVIITRFGDNLKAGLSITRMEEIWTIDDLAFnvaglsldcfippkevqkdsypvdenldwrsplh
Flexible Loop (DISEMBL)
GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTriqspgslptyWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIppkevqkdsypvdenldwrsplh
Low Complexity Region (SEG)
GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDENLDWRSPLH
Disordered region (IsUnstruct)
****IAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPP*********************
Disordered Region (DISOPRED)
**DPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQ***********EMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKE*******************
Disordered Region (DISEMBL)
GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDENLDWRSPLH
Disordered Region (DISPRO)
GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQK****************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDENLDWRSPLH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	176
225441559	362	PREDICTED: uncharacterized protein LOC10	0.988	0.480	0.852	2e-84
297739785	660	unnamed protein product [Vitis vinifera]	0.988	0.263	0.852	2e-84
224088152	360	predicted protein [Populus trichocarpa]	0.988	0.483	0.829	7e-83
224139938	313	predicted protein [Populus trichocarpa]	0.988	0.555	0.835	2e-82
255596814	174	conserved hypothetical protein [Ricinus	0.988	1.0	0.801	2e-80
356570933	353	PREDICTED: uncharacterized protein LOC10	0.988	0.492	0.778	3e-77
356500391	361	PREDICTED: uncharacterized protein LOC10	0.977	0.476	0.774	5e-75
356533085	385	PREDICTED: uncharacterized protein LOC10	0.948	0.433	0.766	2e-71
449533785	161	PREDICTED: uncharacterized protein LOC10	0.914	1.0	0.770	2e-69
449437546	365	PREDICTED: uncharacterized protein LOC10	0.914	0.441	0.763	6e-69

>gi|225441559|ref|XP_002281244.1| PREDICTED: uncharacterized protein LOC100267519 [Vitis vinifera]

 Score =  316 bits (810), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 150/176 (85%), Positives = 163/176 (92%), Gaps = 2/176 (1%)

Query: 1   GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
           GLDP+AV++VFS+AQYMGEKRI  +DCFVLKL+A+ TDLADRSD+TAEMIKHVIFGYFSQ
Sbjct: 188 GLDPLAVSAVFSSAQYMGEKRIMGVDCFVLKLSADHTDLADRSDNTAEMIKHVIFGYFSQ 247

Query: 61  RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
           RSGLLVYLEDSYLTRIQSPGS PTYWETTMATKIEDYR +EGVMIAH GQSS IITRFGD
Sbjct: 248 RSGLLVYLEDSYLTRIQSPGSRPTYWETTMATKIEDYRTVEGVMIAHGGQSSAIITRFGD 307

Query: 121 NLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDENLDWRSPLH 176
           NLK G +ITRMEE WTIDDLAFNV GLS+DCFIPP+EVQKD YP +ENLDWRSPLH
Sbjct: 308 NLKVGPAITRMEETWTIDDLAFNVPGLSMDCFIPPEEVQKD-YP-EENLDWRSPLH 361

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739785|emb|CBI29967.3| unnamed protein product [Vitis vinifera]

 Score =  316 bits (810), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 150/176 (85%), Positives = 163/176 (92%), Gaps = 2/176 (1%)

Query: 1   GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
           GLDP+AV++VFS+AQYMGEKRI  +DCFVLKL+A+ TDLADRSD+TAEMIKHVIFGYFSQ
Sbjct: 188 GLDPLAVSAVFSSAQYMGEKRIMGVDCFVLKLSADHTDLADRSDNTAEMIKHVIFGYFSQ 247

Query: 61  RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
           RSGLLVYLEDSYLTRIQSPGS PTYWETTMATKIEDYR +EGVMIAH GQSS IITRFGD
Sbjct: 248 RSGLLVYLEDSYLTRIQSPGSRPTYWETTMATKIEDYRTVEGVMIAHGGQSSAIITRFGD 307

Query: 121 NLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDENLDWRSPLH 176
           NLK G +ITRMEE WTIDDLAFNV GLS+DCFIPP+EVQKD YP +ENLDWRSPLH
Sbjct: 308 NLKVGPAITRMEETWTIDDLAFNVPGLSMDCFIPPEEVQKD-YP-EENLDWRSPLH 361

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088152|ref|XP_002308345.1| predicted protein [Populus trichocarpa] gi|222854321|gb|EEE91868.1| predicted protein [Populus trichocarpa]

 Score =  311 bits (797), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 146/176 (82%), Positives = 164/176 (93%), Gaps = 2/176 (1%)

Query: 1   GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
           GLDP+A+++VFS AQYMGEKR+S  DCFVLKL+A+Q DLA RSDSTAEMIKH+IFGYFSQ
Sbjct: 186 GLDPMAISAVFSPAQYMGEKRVSGTDCFVLKLSADQADLAARSDSTAEMIKHIIFGYFSQ 245

Query: 61  RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
           RSGLLV+LEDSYLTRIQSPG+ PTYWETTMATKIEDYR +EGVMIAH GQSSV+ITRFGD
Sbjct: 246 RSGLLVHLEDSYLTRIQSPGTYPTYWETTMATKIEDYRIVEGVMIAHGGQSSVMITRFGD 305

Query: 121 NLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDENLDWRSPLH 176
           +LK+GLSITRMEE WTIDDLAFNV GLS+DCFIPP+E+QKD YP +ENLDWRSPLH
Sbjct: 306 SLKSGLSITRMEETWTIDDLAFNVPGLSMDCFIPPEEMQKD-YP-EENLDWRSPLH 359

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139938|ref|XP_002323349.1| predicted protein [Populus trichocarpa] gi|222867979|gb|EEF05110.1| predicted protein [Populus trichocarpa]

 Score =  310 bits (793), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 147/176 (83%), Positives = 164/176 (93%), Gaps = 2/176 (1%)

Query: 1   GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
           GLDP+A+++VFS +QYMGEK IS +DCFVLKL+A+Q DLADRSDSTAEMIKHVIFGYFSQ
Sbjct: 140 GLDPMAISAVFSPSQYMGEKCISGMDCFVLKLSADQADLADRSDSTAEMIKHVIFGYFSQ 199

Query: 61  RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
           ++GLLVYLEDSYLTRIQSPG+ PTYWETTMATKIEDYRA+EGVMIAH GQSSV+I+RFGD
Sbjct: 200 KNGLLVYLEDSYLTRIQSPGTYPTYWETTMATKIEDYRAVEGVMIAHGGQSSVMISRFGD 259

Query: 121 NLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDENLDWRSPLH 176
           NLK GLSITRMEE WTIDDLAF+V GLS+DCFIPPKEVQKD YP +ENLDWRSPL 
Sbjct: 260 NLKEGLSITRMEETWTIDDLAFDVPGLSMDCFIPPKEVQKD-YP-EENLDWRSPLQ 313

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255596814|ref|XP_002536621.1| conserved hypothetical protein [Ricinus communis] gi|223519062|gb|EEF25762.1| conserved hypothetical protein [Ricinus communis]

 Score =  303 bits (775), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 141/176 (80%), Positives = 159/176 (90%), Gaps = 2/176 (1%)

Query: 1   GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
           GLDP+ ++ VFS AQYMGEK +S  DCF+LKL+A+Q DLADRSD+TAEMIKHVIFGYFSQ
Sbjct: 1   GLDPMTISGVFSQAQYMGEKCMSGTDCFILKLSADQADLADRSDTTAEMIKHVIFGYFSQ 60

Query: 61  RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
           RSGLLVYLEDSYLTRIQ+PG+ PTYWETT+AT+IEDYR +EGVMIAHSGQSSV+ITRFGD
Sbjct: 61  RSGLLVYLEDSYLTRIQTPGTYPTYWETTIATRIEDYRTVEGVMIAHSGQSSVMITRFGD 120

Query: 121 NLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDENLDWRSPLH 176
           NLKAGLSITRMEE W IDD AFNVAGLS+DCFIPP+EVQKD+    E+LDWRS LH
Sbjct: 121 NLKAGLSITRMEETWAIDDFAFNVAGLSMDCFIPPREVQKDN--SQEDLDWRSTLH 174

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356570933|ref|XP_003553637.1| PREDICTED: uncharacterized protein LOC100800778 [Glycine max]

 Score =  293 bits (749), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 137/176 (77%), Positives = 159/176 (90%), Gaps = 2/176 (1%)

Query: 1   GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
           GLDP+AV++VFS AQYMGEK+IS IDCFVLKL+ +Q DL DRSD+TAEMIKHV FGYFSQ
Sbjct: 179 GLDPLAVSAVFSAAQYMGEKQISGIDCFVLKLSPDQKDLVDRSDNTAEMIKHVAFGYFSQ 238

Query: 61  RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
           R+GLLV+LEDSYLTRIQSPG+ PTYWETTM+TKIEDY+ ++GVMIAH+G S+VIITRFGD
Sbjct: 239 RNGLLVHLEDSYLTRIQSPGTHPTYWETTMSTKIEDYKMVDGVMIAHAGHSTVIITRFGD 298

Query: 121 NLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDENLDWRSPLH 176
           NLK G +ITR+EE WTIDD+AFNV GLS+DCFIPPKE+ KD YP  E+LDWRSPLH
Sbjct: 299 NLKTGPAITRLEESWTIDDVAFNVQGLSMDCFIPPKELHKD-YP-QEDLDWRSPLH 352

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500391|ref|XP_003519015.1| PREDICTED: uncharacterized protein LOC100801654 [Glycine max]

 Score =  285 bits (729), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 134/173 (77%), Positives = 154/173 (89%), Gaps = 1/173 (0%)

Query: 1   GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
           GLDP+AV++VF  AQYMGEK IS +DCFVLKL+A+Q DL +RSD+TAEMIKH IFGYFSQ
Sbjct: 186 GLDPLAVSAVFCAAQYMGEKEISGMDCFVLKLSADQKDLVERSDNTAEMIKHAIFGYFSQ 245

Query: 61  RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
           RSGLLVYLEDSYLTRIQ+PGS PTYWETTM+TKIEDYR ++GVMIAH+G S+ +ITRFGD
Sbjct: 246 RSGLLVYLEDSYLTRIQAPGSHPTYWETTMSTKIEDYRIVDGVMIAHAGSSTALITRFGD 305

Query: 121 NLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDENLDWRS 173
           NLKAG SITR+EE WTIDD+AFNV GLSLDCFIPP+E+Q+D    DE LDWRS
Sbjct: 306 NLKAGPSITRLEESWTIDDVAFNVPGLSLDCFIPPQELQRDCSSDDE-LDWRS 357

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356533085|ref|XP_003535099.1| PREDICTED: uncharacterized protein LOC100800198 [Glycine max]

 Score =  273 bits (697), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 128/167 (76%), Positives = 145/167 (86%)

Query: 1   GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
           GLDP+AV+SVF  AQYMGEK IS +DCFVLKL+A Q DL +RSDS AEMIKH IFGYFSQ
Sbjct: 188 GLDPLAVSSVFCAAQYMGEKEISGMDCFVLKLSAEQKDLVERSDSKAEMIKHAIFGYFSQ 247

Query: 61  RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
           RSGLLVYL DSYLTRIQ+PGS PTYWETTM+TKIEDYR ++GVMIAH+G S+ +ITRFGD
Sbjct: 248 RSGLLVYLGDSYLTRIQAPGSHPTYWETTMSTKIEDYRIVDGVMIAHAGSSTTLITRFGD 307

Query: 121 NLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDE 167
           NLKAG SITR+EE WTIDD+AF V GLSLDCFIPP+E+Q+D    DE
Sbjct: 308 NLKAGPSITRLEESWTIDDVAFYVKGLSLDCFIPPQELQRDCSSDDE 354

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449533785|ref|XP_004173852.1| PREDICTED: uncharacterized protein LOC101228613, partial [Cucumis sativus]

 Score =  266 bits (680), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 124/161 (77%), Positives = 144/161 (89%)

Query: 1   GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
           GLDP+A++ VFS AQYMGEK+I  IDCFVLKL+A+QTDLADRSD+TAEMIKH I+GYF Q
Sbjct: 1   GLDPLAISEVFSPAQYMGEKQIMAIDCFVLKLSADQTDLADRSDNTAEMIKHAIYGYFCQ 60

Query: 61  RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
           R GLLVYLEDS LTRIQSPGS P YWETTM+TKI+DYR I+GVMIAHSG++ VIITRFGD
Sbjct: 61  RRGLLVYLEDSSLTRIQSPGSHPMYWETTMSTKIDDYRTIDGVMIAHSGETDVIITRFGD 120

Query: 121 NLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKD 161
           +LK G  ITR++EIW+IDD+AFNV GLS+D FIPPK+VQKD
Sbjct: 121 DLKTGPMITRLQEIWSIDDVAFNVPGLSMDSFIPPKQVQKD 161

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437546|ref|XP_004136553.1| PREDICTED: uncharacterized protein LOC101217417 [Cucumis sativus]

 Score =  265 bits (676), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 123/161 (76%), Positives = 144/161 (89%)

Query: 1   GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
           GLDP+A++ VFS AQYMGEK+I  IDCFVLKL+A+QTDLADRSD+TAEMIKH I+GYF Q
Sbjct: 205 GLDPLAISEVFSPAQYMGEKQIMAIDCFVLKLSADQTDLADRSDNTAEMIKHAIYGYFCQ 264

Query: 61  RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
           R GLLVYLEDS LTRIQSPGS P YWETTM+TKI+DYR I+GVMIAHSG++ VIITRFGD
Sbjct: 265 RRGLLVYLEDSSLTRIQSPGSHPMYWETTMSTKIDDYRTIDGVMIAHSGETDVIITRFGD 324

Query: 121 NLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKD 161
           +LK G  ITR++EIW+IDD+AFNV GLS+D FIPPK+VQK+
Sbjct: 325 DLKTGPMITRLQEIWSIDDVAFNVPGLSMDSFIPPKQVQKN 365

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	176
TAIR|locus:2144128	368	AT5G06610 "AT5G06610" [Arabido	0.943	0.451	0.666	9.3e-59
TAIR|locus:2199191	433	AT1G27690 "AT1G27690" [Arabido	0.943	0.383	0.524	1.9e-44
TAIR|locus:2101510	485	AT3G19540 "AT3G19540" [Arabido	0.914	0.331	0.530	3.9e-44
TAIR|locus:2206425	417	AT1G79420 "AT1G79420" [Arabido	0.954	0.402	0.520	8.1e-44
TAIR|locus:2166414	439	AT5G05840 "AT5G05840" [Arabido	0.943	0.378	0.491	3.2e-42
TAIR|locus:2007268	494	AT1G49840 "AT1G49840" [Arabido	0.914	0.325	0.5	5.2e-42
TAIR|locus:2078946	438	AT3G55720 "AT3G55720" [Arabido	0.892	0.358	0.443	3.7e-32
TAIR|locus:2173634	370	AT5G66740 "AT5G66740" [Arabido	0.886	0.421	0.431	1.6e-29
TAIR|locus:2025207	395	AT1G75160 "AT1G75160" [Arabido	0.897	0.4	0.392	5.7e-27

TAIR|locus:2144128 AT5G06610 "AT5G06610" [Arabidopsis thaliana (taxid:3702)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 112/168 (66%), Positives = 145/168 (86%)

Query:     1 GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
             GLDP+ ++SVFS+AQ++GEK I+  DCF+LKL+ +Q DL+ RSDSTAEMIKHV FGYFSQ
Sbjct:   191 GLDPLTISSVFSSAQFVGEKEINGKDCFILKLSTDQIDLSKRSDSTAEMIKHVAFGYFSQ 250

Query:    61 RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEG--VMIAHSGQSSVIITRF 118
             +SGLL+ LEDS LTRIQ PG++PTYWET+M++ +EDYRAIEG  V+IAHSG++ V+I+RF
Sbjct:   251 KSGLLICLEDSSLTRIQIPGTVPTYWETSMSSWMEDYRAIEGSEVVIAHSGKTDVLISRF 310

Query:   119 GDNLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVD 166
             G+ LK G+S+TRMEE WTIDD+AF+V GLS+DCFIPPKE++ D +  D
Sbjct:   311 GETLKGGISVTRMEEKWTIDDVAFDVPGLSVDCFIPPKEMKMDFHHQD 358

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2199191 AT1G27690 "AT1G27690" [Arabidopsis thaliana (taxid:3702)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 87/166 (52%), Positives = 119/166 (71%)

Query:     1 GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
             GLDP   A +F+ A+ +GEK+I   DCF+LKL A+   L  RS+  +E I+H +FGYFSQ
Sbjct:   252 GLDPRTTAYMFANARCIGEKKIDGEDCFILKLCADPATLKARSEGASETIRHTLFGYFSQ 311

Query:    61 RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
             ++GLLV+LEDS LTRIQ+ G    YWETT+ + +EDY+ +EG+MIAHSG+S   + RFGD
Sbjct:   312 KTGLLVHLEDSQLTRIQNNGGEAVYWETTINSYLEDYKPVEGIMIAHSGRSVATLLRFGD 371

Query:   121 NLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVD 166
                   + T M+E W ID+++FNV GLS+DCFIPP E++ DS+  D
Sbjct:   372 MSSGHNTKTTMQEAWVIDEISFNVPGLSIDCFIPPSELRFDSHVED 417

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:2101510 AT3G19540 "AT3G19540" [Arabidopsis thaliana (taxid:3702)]

 Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
 Identities = 86/162 (53%), Positives = 122/162 (75%)

Query:     1 GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
             GLDP   A++F+ A+ +GEK+++  DCF+LKL  +   L  RS+  AE+I+HV+FGYFSQ
Sbjct:   278 GLDPRTTAAMFAEAKCIGEKKVNGEDCFILKLCTDPETLKARSEGPAEIIRHVLFGYFSQ 337

Query:    61 RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
             ++GLLV++EDS+LTRIQS G    +WETT  + ++DYR +EG+MIAHSG S V + RFG+
Sbjct:   338 KTGLLVHIEDSHLTRIQSNGGETVFWETTYNSSLDDYRQVEGIMIAHSGHSVVTLFRFGE 397

Query:   121 NLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDS 162
              +    + T+MEE WTI+++AFNV GLSLDCFIPP +++  S
Sbjct:   398 -VATSHTRTKMEESWTIEEVAFNVPGLSLDCFIPPADLKTGS 438

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2206425 AT1G79420 "AT1G79420" [Arabidopsis thaliana (taxid:3702)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 90/173 (52%), Positives = 124/173 (71%)

Query:     1 GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDS--TAEMIKHVIFGYF 58
             GLDP   AS+F+ AQ +GE+RI D DCFVLK++A++  L +R+D+   AE+I+H ++GYF
Sbjct:   239 GLDPKTTASLFAKAQCLGERRIGDDDCFVLKVSADRDSLLERNDAGAPAEVIRHALYGYF 298

Query:    59 SQRSGLLVYLEDSYLTRIQ--SPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIIT 116
              Q+SGLLVYLEDS+LTR+   SP     YWETT+ T I DYR ++GV +AH G++   + 
Sbjct:   299 CQKSGLLVYLEDSHLTRVMTISPEDEAVYWETTIGTSIGDYRDVDGVAVAHCGRAVATVF 358

Query:   117 RFGDNLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDENL 169
             RFG+      S TRMEEIW IDD+ F+V GLSLD FIPP ++ +D+ P + N+
Sbjct:   359 RFGET-SLQYSRTRMEEIWRIDDVVFDVPGLSLDSFIPPADIFEDTNPNNNNI 410

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009887 "organ morphogenesis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0048439 "flower morphogenesis" evidence=RCA

GO:0048519 "negative regulation of biological process" evidence=RCA

TAIR|locus:2166414 AT5G05840 "AT5G05840" [Arabidopsis thaliana (taxid:3702)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 82/167 (49%), Positives = 122/167 (73%)

Query:     1 GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
             GLDP + A++F+ +  MGEK+I+D DCF+LKL A  + L  RS S  E+I+H ++G FSQ
Sbjct:   230 GLDPKSTANLFARSVCMGEKKINDEDCFILKLDAEPSALKARSSSNVEIIRHTVWGCFSQ 289

Query:    61 RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
             R+GLL+ LEDS+L RI++      +WETTM + I+DYR ++G+++AH+G+SSV + RFG+
Sbjct:   290 RTGLLIQLEDSHLLRIKAQDDNSIFWETTMESLIQDYRTVDGILVAHAGKSSVSLFRFGE 349

Query:   121 NLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDE 167
             N     S TRMEE W I+++ FN+ GLS+DCF+PP +++KD    +E
Sbjct:   350 N-SDNHSRTRMEETWEIEEMDFNIKGLSMDCFLPPSDLKKDDDEEEE 395

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2007268 AT1G49840 "AT1G49840" [Arabidopsis thaliana (taxid:3702)]

 Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
 Identities = 81/162 (50%), Positives = 120/162 (74%)

Query:     1 GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
             GLDP   A++F+ ++ +GE++++  DCF+LKL  +   L  RS+  AE+++H++FGYFSQ
Sbjct:   286 GLDPRTTATMFAESKCVGERKVNGEDCFILKLCTDPETLRARSEGPAEIVRHILFGYFSQ 345

Query:    61 RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
             R+GLL  +EDS LTRIQS      YWETT+ + ++DY+ +EG+MIAHSG+S V + RFG+
Sbjct:   346 RTGLLAQIEDSQLTRIQSNDGDAVYWETTINSSLDDYKQVEGIMIAHSGRSVVTLFRFGE 405

Query:   121 NLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKDS 162
              +    + T+MEE WTI+++AFNV GLSLDCFIPP +++  S
Sbjct:   406 -VAMSHTRTKMEERWTIEEVAFNVPGLSLDCFIPPADLRSGS 446

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2078946 AT3G55720 "AT3G55720" [Arabidopsis thaliana (taxid:3702)]

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 71/160 (44%), Positives = 106/160 (66%)

Query:     1 GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
             GLDP   A++F+ +  +GEK +++ +CFVLKL    + L  RS S  E +KH ++G F Q
Sbjct:   232 GLDPKTTANLFAGSVCVGEKAVNNEECFVLKLETQPSGLKSRSKSGMETVKHTVWGCFGQ 291

Query:    61 RSGLLVYLEDSYLTRIQS--PGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRF 118
             R+GLLV LED+YL RI++         WETT  T I+DY++I+G+ IAH G++ V + R 
Sbjct:   292 RTGLLVQLEDTYLVRIKTGLEDEDMVLWETTSETLIQDYKSIDGIQIAHRGKTRVSLLRL 351

Query:   119 GDNLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEV 158
              ++L++  S T MEE W I+++ FNV GLS D F+PP ++
Sbjct:   352 DESLESH-SKTTMEESWEIEEVGFNVKGLSSDFFLPPGDL 390

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0080167 "response to karrikin" evidence=IEP

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2173634 AT5G66740 "AT5G66740" [Arabidopsis thaliana (taxid:3702)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 69/160 (43%), Positives = 102/160 (63%)

Query:     1 GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
             GLDP + A++F  A  +GEK I+  DCF+LKL  +      +S    E+I H I+GYFSQ
Sbjct:   211 GLDPRSTANLFLDATCIGEKIINGEDCFILKLETSPAVREAQSGPNFEIIHHTIWGYFSQ 270

Query:    61 RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
             RSGLL+  EDS L R+++      +WET+  + ++DYR ++ V IAH G++SV + R+G+
Sbjct:   271 RSGLLIQFEDSRLLRMRTKEDEDVFWETSAESVMDDYRYVDNVNIAHGGKTSVTVFRYGE 330

Query:   121 NLKAGLSITR-MEEIWTIDDLAFNVAGLSLDCFIPPKEVQ 159
                A  +  R M E W I+++ FNV GLS+D F+PP  +Q
Sbjct:   331 ---ASANHRRQMTEKWRIEEVDFNVWGLSVDHFLPPANLQ 367

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2025207 AT1G75160 "AT1G75160" [Arabidopsis thaliana (taxid:3702)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 64/163 (39%), Positives = 97/163 (59%)

Query:     1 GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
             GLDP   AS+F  A  +GE+ ++  DCFVLK+      L  +     E+I H ++GYFSQ
Sbjct:   235 GLDPRCTASLFLDAVCIGEQPVNGEDCFVLKVETPSDILKAQCSPNTEVIHHTVWGYFSQ 294

Query:    61 RSGLLVYLEDSYLTRIQSP-GSLP-TYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRF 118
             R+GLLV   D+ L R++S  G     +WET+M + I+DY  ++ V IAH GQ+   + R+
Sbjct:   295 RTGLLVKFGDTKLVRVKSGRGKNDGVFWETSMESIIDDYIFVDAVNIAHGGQTVTTLYRY 354

Query:   119 GDNLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPKEVQKD 161
             G  +       R+EE W I+++ FN+ GL L+ F+PP ++  D
Sbjct:   355 GGAVNHR---RRIEEKWRIEEVDFNICGLCLESFLPPSDINND 394


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      176       176   0.00081  109 3  11 22  0.41    32
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  157 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.31u 0.13s 15.44t   Elapsed:  00:00:01
  Total cpu time:  15.31u 0.13s 15.44t   Elapsed:  00:00:01
  Start:  Sat May 11 09:50:40 2013   End:  Sat May 11 09:50:41 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00025444001 SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (362 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	176
pfam04788	243	pfam04788, DUF620, Protein of unknown function (DU	4e-81

>gnl|CDD|191093 pfam04788, DUF620, Protein of unknown function (DUF620)

 Score =  240 bits (613), Expect = 4e-81
 Identities = 97/155 (62%), Positives = 120/155 (77%), Gaps = 1/155 (0%)

Query: 1   GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQ 60
           GLDP   AS+F+ AQ +GEKR+   DCFVLKL A+   L+ RSD  AE+I+H +FGYFSQ
Sbjct: 90  GLDPKTTASLFANAQCVGEKRVDGEDCFVLKLDADPAALSARSDGPAEVIRHTLFGYFSQ 149

Query: 61  RSGLLVYLEDSYLTRIQSPGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGD 120
           RSGLLV LEDS+LTRIQ+PG+   YWETT+ + + DYRA++GVMIAHSG+S V + RFG+
Sbjct: 150 RSGLLVRLEDSHLTRIQTPGADAVYWETTIESSLGDYRAVDGVMIAHSGRSVVTLFRFGE 209

Query: 121 NLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPP 155
           +  +  S TRMEE WTIDD+AFNV GLS D FIPP
Sbjct: 210 DSGSH-SRTRMEEAWTIDDVAFNVPGLSPDSFIPP 243

Family of uncharacterized proteins. Length = 243

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	176
PF04788	245	DUF620: Protein of unknown function (DUF620); Inte	100.0

>PF04788 DUF620: Protein of unknown function (DUF620); InterPro: IPR006873 This is a family of uncharacterised proteins

Probab=100.00  E-value=6e-95  Score=617.30  Aligned_cols=154  Identities=62%  Similarity=1.034  Sum_probs=151.1

Q ss_pred             CCChhhhhhhhhcceeeeeceeCCcceeEEEeccCchhhhcccCCCceEEEeeeecccccccceeEEEeeeeeeeeeC--
Q 046391            1 GLDPIAVASVFSTAQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQS--   78 (176)
Q Consensus         1 GLDPr~tA~lF~~a~ciGEk~i~geDCFiLkl~a~~~~l~ars~~~~EiirH~~~GYFSQrtGLLv~lEDs~Ltriq~--   78 (176)
                      |||||+|||||++|+|||||+|||||||||||+|||++|++||++++|||||++|||||||||||||||||||+|||+  
T Consensus        90 GLDPr~ta~lF~~A~cvGEk~i~gedCFvLkl~ad~~~l~ars~~~~EiirH~~~GYFSQrtGLLv~lEDS~L~ri~~~~  169 (245)
T PF04788_consen   90 GLDPRSTANLFSNAVCVGEKRINGEDCFVLKLEADPSALKARSSGNAEIIRHTLWGYFSQRTGLLVQLEDSHLTRIQSGR  169 (245)
T ss_pred             hcChhhHHHhhhhceEeeeeccCCcccEEEEeeCCHHHHhhhcCCCcEEEEEeeecccccccceeeeeecceeEEeeecC
Confidence            899999999999999999999999999999999999999999999999999999999999999999999999999999  


Q ss_pred             CCCCCeEEeecccccccccccccceeeecCCcceEEEEEecCcccCCcceeeeeeeeeeeeeeeeccCCCcccccCC
Q 046391           79 PGSLPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPP  155 (176)
Q Consensus        79 ~~~~~vyWETt~eS~i~DYR~VdGi~IAH~G~t~vtl~RfGe~~~~~~~~trmEE~WtIeev~FNV~GLS~DcFiPP  155 (176)
                      +++++|||||||+|.|+|||+||||||||+|||+||||||||+ .++|++|||||+|+|||||||||||||||||||
T Consensus       170 ~~~~~vyWETt~es~i~DYR~Vdgv~IAH~G~t~vtl~RfGe~-~~~h~rTrmEE~W~Ieev~FNV~GLS~DcFiPP  245 (245)
T PF04788_consen  170 PGGDAVYWETTMESSIEDYRAVDGVNIAHSGRTVVTLFRFGEN-SMSHSRTRMEETWTIEEVDFNVPGLSMDCFIPP  245 (245)
T ss_pred             CCCCceEEEEeecccccccccccceeeeccCCceEEEEecccc-cccCceeeEeeeeEeeeEEeccCCcchhcccCC
Confidence            7899999999999999999999999999999999999999997 466699999999999999999999999999999

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	176
3buu_A	229	Uncharacterized LOLA superfamily protein NE2245; P	92.02
3bk5_A	237	Putative outer membrane lipoprotein-sorting prote;	91.45

>3buu_A Uncharacterized LOLA superfamily protein NE2245; PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.20A {Nitrosomonas europaea atcc 19718}

Probab=92.02  E-value=1.1  Score=34.59  Aligned_cols=108  Identities=20%  Similarity=0.239  Sum_probs=62.9

Q ss_pred             ceeeeeceeCCcceeEEEeccCchhhhcccCCCceEEEeeeecccccccceeEEEeeeeeeeeeCCCCCCeEEeeccccc
Q 046391           14 AQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGSLPTYWETTMATK   93 (176)
Q Consensus        14 a~ciGEk~i~geDCFiLkl~a~~~~l~ars~~~~EiirH~~~GYFSQrtGLLv~lEDs~Ltriq~~~~~~vyWETt~eS~   93 (176)
                      ...+|++.++|.+|.+|++.+-... +  .     .=+..  =|+.+.|+|+++.+-  +      ....--|++..   
T Consensus       117 ~~l~g~~~v~g~~~~vl~~~pk~~~-~--~-----y~k~~--lwiD~~t~~p~k~~~--~------d~~G~l~k~~~---  175 (229)
T 3buu_A          117 PQLLRNESIDDEDYYVLELTGIDRS-V--T-----YQKVL--LWVNQSNFRPYKAEF--Y------SVSGRLLKTSR---  175 (229)
T ss_dssp             EEEEEEEEETTEEEEEEEEEESSTT-S--S-----CSEEE--EEEETTTCCEEEEEE--E------CTTSCEEEEEE---
T ss_pred             eEEeeeeeeCCeeEEEEEEEecCCC-C--c-----eEEEE--EEEECCCCcEEEEEE--E------cCCCCEEEEEE---
Confidence            3689999999999999998764432 1  0     00111  145677888777643  1      12233566443   


Q ss_pred             ccccccccceeeecCCcceEEEEEecCcccCCcceeeeeeeeeeeeeeeeccCCCcccccCCc
Q 046391           94 IEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIPPK  156 (176)
Q Consensus        94 i~DYR~VdGi~IAH~G~t~vtl~RfGe~~~~~~~~trmEE~WtIeev~FNV~GLS~DcFiPP~  156 (176)
                      ..+|..++|+.+++       -...-+....+ .+|.|+    +.++.||  +|+-..|-|+.
T Consensus       176 ~~~~~~~~g~~~~~-------~~~~~d~~~~g-~~t~~~----~~~~~~~--~l~~~~Ft~~~  224 (229)
T 3buu_A          176 YENFDNILGEMRPT-------RIIMEDALKSG-EVSVLD----YSDMKLR--DLPDKIFTKDY  224 (229)
T ss_dssp             EEEEEEETTEEEEE-------EEEEEESSSSC-CEEEEE----EEEEEEC--CCCGGGSSTGG
T ss_pred             eeccEEECCEEEeE-------EEEEEeCcCCC-CEEEEE----EeeeEeC--CCChHhCCHHH
Confidence            45677777765543       22222211122 256654    5688898  88888886543

>3bk5_A Putative outer membrane lipoprotein-sorting prote; putative outer membrane protein domain, PSI-2, protein struc initiative; HET: MSE; 2.00A {Vibrio parahaemolyticus rimd 2210633}

Probab=91.45  E-value=0.88  Score=35.43  Aligned_cols=106  Identities=18%  Similarity=0.286  Sum_probs=62.6

Q ss_pred             ceeeeeceeCCcceeEEEeccCchhhhcccCCCceEEEeeeecccccccceeEEEeeeeeeeeeCCCCCCeEEeeccccc
Q 046391           14 AQYMGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGSLPTYWETTMATK   93 (176)
Q Consensus        14 a~ciGEk~i~geDCFiLkl~a~~~~l~ars~~~~EiirH~~~GYFSQrtGLLv~lEDs~Ltriq~~~~~~vyWETt~eS~   93 (176)
                      ...+|+++++|.+|.+|++.+-...       + ..-+..+  |..+.++++++.+-  .   . ..|  --|++-.   
T Consensus       126 ~~l~g~~~~~g~~~~vl~~~pk~~~-------~-~y~k~~~--wiD~~t~~~~k~~~--~---d-~~G--~l~~~~~---  184 (237)
T 3bk5_A          126 FNHLKDEKFNGQDVFVLEQIPTDKN-------S-GYTKQVV--WLDKAHYRPLKVEF--Y---D-RKG--ALLKTLT---  184 (237)
T ss_dssp             EEEEEEEEETTEEEEEEEEEESCTT-------S-SEEEEEE--EEETTTCCEEEEEE--E---E-TTS--CEEEEEE---
T ss_pred             eEEeeeeEECCeeEEEEEEEECCCC-------C-CceEEEE--EEECCCCeEEEEEE--E---c-CCC--CEEEEEE---
Confidence            4889999999999999998664332       1 1222222  46778888888753  1   1 122  2455443   


Q ss_pred             ccccccccc-eeeecCCcceEEEEEecCcccCCcceeeeeeeeeeeeeeeeccCCCcccccC
Q 046391           94 IEDYRAIEG-VMIAHSGQSSVIITRFGDNLKAGLSITRMEEIWTIDDLAFNVAGLSLDCFIP  154 (176)
Q Consensus        94 i~DYR~VdG-i~IAH~G~t~vtl~RfGe~~~~~~~~trmEE~WtIeev~FNV~GLS~DcFiP  154 (176)
                      +.+|+.++| +.+++       ....-+ +..+ ..|.|+    +.++.||. +|.-..|=|
T Consensus       185 ~~~~~~~~g~~~~~~-------~~~~~d-l~~g-~~t~~~----~~~~~~~~-~~~~~~Ft~  232 (237)
T 3bk5_A          185 FANYKQYLDKYWRAH-------TMAMTN-HQTG-KSTELN----TSDLRFQT-GLEENDFNK  232 (237)
T ss_dssp             EEEEEEETTTEEEEE-------EEEEEE-TTTC-CEEEEE----EEEEEECC-CCCGGGGCG
T ss_pred             EeeeEEEcceEEEEE-------EEEEEE-CCCC-CEEEEE----EeeEEeCC-CCChHhCCH
Confidence            346777787 55543       222222 2222 256665    55899998 676666644

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00