Citrus Sinensis ID: 046521

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200--
Protein Sequence
IVVKASVKNCNTDLNIIMSGCLFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKFYDISCGENLKLYILAFCAWKHYRLCICDFKGRWIILPLKVLKTCGGCLTISIPKFLTRFQGHLLKKRSICEQGIL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccHHHHcccccEEEEEEEEccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cEEEEcccccccccccccccccccccccHHHHcccccHHEEEEEcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
ivvkasvkncntdlniimsgclfglqrplhdilgggtVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWskaaglipmspptvdeirlsdrtctsLFANVNClltkfydiscgenLKLYILAFCAWKHYRLCICdfkgrwiilpLKVLKtcggcltisiPKFLTRFQGhllkkrsiceqgil
Flexible Loop (DISEMBL)
ivvkasvkncntdlNIIMSGCLFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKFYDISCGENLKLYILAFCAWKHYRLCICDFKGRWIILPLKVLKTCGGCLTISIPKFLTrfqghllkkrsiceqgil
Low Complexity Region (SEG)
IVVKASVKNCNTDLNIIMSGCLFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKFYDISCGENLKLYILAFCAWKHYRLCICDFKGRWIILPLKVLKTCGGCLTISIPKFLTRFQGHLLKKRSICEQGIL
Disordered region (IsUnstruct)
*****SVKNCNTDLNIIMSGCLFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKFYDISCGENLKLYILAFCAWKHYRLCICDFKGRWIILPLKVLKTCGGCLTISIPKFLTRFQGHLLKKRSIC*****
Disordered Region (DISOPRED)
******************************DILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKFYDISCGENLKLYILAFCAWKHYRLCICDFKGRWIILPLKVLKTCGGCLTISIPKFLTRFQGHLLKKRSICEQGIL
Disordered Region (DISEMBL)
IVVKASVKNCNTDLNIIMSGCLFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKFYDISCGENLKLYILAFCAWKHYRLCICDFKGRWIILPLKVLKTCGGCLTISIPKFLTRFQGHLLKKRSICEQGIL
Disordered Region (DISPRO)
IV***S**************CLFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKFYDISCGENLKLYILAFCAWKHYRLCICDFKGRWIILPLKVLKTCGGCLTISIPKFLTRFQGHLLKKRSICEQGIL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
IVVKASVKNCNTDLNIIMSGCLFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKFYDISCGENLKLYILAFCAWKHYRLCICDFKGRWIILPLKVLKTCGGCLTISIPKFLTRFQGHLLKKRSICEQGIL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	202	2.2.26 [Sep-21-2011]
Q9SUR3	275	Reticulon-like protein B1	yes	no	0.613	0.450	0.335	3e-22
Q9SUT9	271	Reticulon-like protein B2	no	no	0.613	0.457	0.335	9e-22
Q6DBN4	253	Reticulon-like protein B6	no	no	0.618	0.494	0.361	2e-21
Q9FFS0	257	Reticulon-like protein B4	no	no	0.613	0.482	0.359	3e-21
Q9LJQ5	225	Reticulon-like protein B9	no	no	0.698	0.626	0.337	3e-21
Q9SH59	255	Reticulon-like protein B3	no	no	0.613	0.486	0.359	2e-20
O82352	255	Reticulon-like protein B5	no	no	0.663	0.525	0.342	2e-20
Q9SS37	247	Reticulon-like protein B8	no	no	0.599	0.489	0.384	5e-20
A2RVT6	215	Reticulon-like protein B1	no	no	0.579	0.544	0.411	1e-19
Q8GYH6	226	Reticulon-like protein B1	no	no	0.806	0.721	0.267	3e-13

>sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1

 Score =  105 bits (261), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 76/128 (59%), Gaps = 4/128 (3%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           LFG ++P+H +LGGG  AD+ +WKN+ +S  +L   T  W++FE++EY+ +TLLC+ +  
Sbjct: 73  LFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIV 132

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSDRT----CTSLFANVNCLLTKFYDISCGENLK 137
           ++  LF+WS A   I  SPP + E+ + +       + L   +N   +   +I+ G +LK
Sbjct: 133 VLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLK 192

Query: 138 LYILAFCA 145
            +++A   
Sbjct: 193 KFLIAIAG 200

Plays a role in the Agrobacterium-mediated plant transformation via its interaction with VirB2, the major component of the T-pilus.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUT9|RTNLB_ARATH Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1

 Score =  103 bits (256), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 75/128 (58%), Gaps = 4/128 (3%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           LFG +RP+H +LGGG  AD+ +WK++ +S  +    TV W+LFE++EY+ +TLLC+ +  
Sbjct: 69  LFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIV 128

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSDRT----CTSLFANVNCLLTKFYDISCGENLK 137
            +  LF+WS A   I  SPP + E+ + +       + L   +N  ++   +I+ G ++K
Sbjct: 129 ALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIK 188

Query: 138 LYILAFCA 145
            ++ A   
Sbjct: 189 KFLSAIAG 196

Plays a role in the Agrobacterium-mediated plant transformation via its interaction with VirB2, the major component of the T-pilus.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBN4|RTNLF_ARATH Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1

 Score =  102 bits (253), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 80/130 (61%), Gaps = 5/130 (3%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           LFG ++P+H +LGGG  AD+ LW+++ LSA++L V T IW+LFE++EY+F++L+C+ L F
Sbjct: 52  LFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIF 111

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSDRT----CTSLFANVNCLLTKFYDISCGENLK 137
            +  LF+ S A   +  +PP + EI + +       ++L   +N        I+ G +LK
Sbjct: 112 ALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLK 171

Query: 138 LYIL-AFCAW 146
            +++  F  W
Sbjct: 172 KFLMVVFGLW 181

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFS0|RTNLD_ARATH Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1

 Score =  101 bits (252), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 4/128 (3%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           LFG ++P+H +LGGG  AD+ LW+N+ +S  +L  VT  W+LFE+ EY+ +  LC+F  F
Sbjct: 52  LFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIF 111

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSD----RTCTSLFANVNCLLTKFYDISCGENLK 137
            +  LF+WS A   I  S P + E+ + +    +  + L   +N  LT   +I+ G+++K
Sbjct: 112 ALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVK 171

Query: 138 LYILAFCA 145
            +IL    
Sbjct: 172 KFILVIAG 179

Plays a role in the Agrobacterium-mediated plant transformation via its interaction with VirB2, the major component of the T-pilus.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LJQ5|RTNLI_ARATH Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1

 Score =  101 bits (251), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 80/145 (55%), Gaps = 4/145 (2%)

Query: 2   VVKASVKNCNTDLNIIMSGCLFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIW 61
           +   S  +   +  I  +  LF  QR +H I GGG VAD+LLW+   ++A +++ V+++W
Sbjct: 3   IFTGSSSDSEDERTIHKTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILW 62

Query: 62  LLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSDRT----CTSLF 117
            L E++EYNFITL+C+     M+  FIWS A+  +    P + E+ L + +      S  
Sbjct: 63  FLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFH 122

Query: 118 ANVNCLLTKFYDISCGENLKLYILA 142
              N +LTK  D++CG +  L+ L 
Sbjct: 123 VRFNQILTKLLDVACGRDPPLFFLT 147

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SH59|RTNLC_ARATH Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1

 Score = 98.6 bits (244), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 4/128 (3%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           LFG ++PLH + GGG  AD+ LW+N+ +S  +L   TV W+LFE+LEYN +TL  +    
Sbjct: 48  LFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISIL 107

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSD----RTCTSLFANVNCLLTKFYDISCGENLK 137
            +  LF+WS A+  I  SP  + E+ + +    +  + L   +N   T   DI+ G +LK
Sbjct: 108 ALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLK 167

Query: 138 LYILAFCA 145
            ++L    
Sbjct: 168 KFLLVIAG 175

Arabidopsis thaliana (taxid: 3702)

>sp|O82352|RTNLE_ARATH Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1

 Score = 98.6 bits (244), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 9/143 (6%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           +FG ++P+H +LGGG  AD+ LW+++ LS A+L V T IW+LFE++EY+ ++LLC+    
Sbjct: 52  MFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISIL 111

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSDRT----CTSLFANVNCLLTKFYDISCGENLK 137
            +  LF+WS A  LI  + P + EI + +       +SL   +N        I+ G +LK
Sbjct: 112 ALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLK 171

Query: 138 LYILAFCAWKHYRLCICDFKGRW 160
            +++         L I    G W
Sbjct: 172 KFLMVVVG-----LWIISVVGNW 189

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SS37|RTNLH_ARATH Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1

 Score = 97.8 bits (242), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 76/125 (60%), Gaps = 4/125 (3%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           LF  Q+P+H +LGGG  AD+LLW+N+ +SA++L+  T IW+LFE + ++F++L+CY L  
Sbjct: 45  LFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLL 104

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSD----RTCTSLFANVNCLLTKFYDISCGENLK 137
            MI  F+WS A+G +  S   V  + L          ++   VN  L    D++C  NLK
Sbjct: 105 GMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLK 164

Query: 138 LYILA 142
            +++A
Sbjct: 165 QFLMA 169

Arabidopsis thaliana (taxid: 3702)

>sp|A2RVT6|RTNLN_ARATH Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2

 Score = 96.3 bits (238), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 2/119 (1%)

Query: 29  LHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFI 88
           L+  LGGG  AD++ WKN+  S  IL V T+IW LFE++EY FIT LC  L   +    I
Sbjct: 22  LYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLI 81

Query: 89  WS--KAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKFYDISCGENLKLYILAFCA 145
           WS   ++ LI   PP+++++R+S+     LF  +N  + K YDIS G++ +L  LA  +
Sbjct: 82  WSYIGSSQLIQSKPPSINDLRISESNWRFLFNKINWFIIKLYDISSGKDFRLLFLAVVS 140

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GYH6|RTNLP_ARATH Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1

 Score = 75.1 bits (183), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           L G Q  +H  +GGG  AD+LLW+ R+LS  ++++ TV WL+FE     F+++    L  
Sbjct: 25  LLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLI 84

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFAN----VNCLLTKFYDISCGENLK 137
           +++  F+ ++ +        ++ E+ LS+    S  A+    +N LL   +D++ G + +
Sbjct: 85  VIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFR 144

Query: 138 LYI-LAFCAWKHYRLCICDFKGRWIILPLKVLKTCGGCLTISIPKFLTRFQGHLLK 192
           L+  +  C W      +    G +I   L  L   G  L+++IP   +++Q  + K
Sbjct: 145 LFFKVVICLW------LLSAIGSYI--SLCTLLYIGTILSVTIPALYSKYQSKVDK 192

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	202
225424075	216	PREDICTED: reticulon-like protein B9-lik	0.579	0.541	0.521	5e-30
297737775	267	unnamed protein product [Vitis vinifera]	0.579	0.438	0.521	9e-30
351723139	212	uncharacterized protein LOC100306402 [Gl	0.618	0.589	0.468	8e-27
356575584	211	PREDICTED: reticulon-like protein B9-lik	0.594	0.568	0.458	2e-25
218188884	231	hypothetical protein OsI_03344 [Oryza sa	0.648	0.567	0.427	9e-25
115434434	213	Os01g0139000 [Oryza sativa Japonica Grou	0.594	0.563	0.419	3e-24
125553216	220	hypothetical protein OsI_20880 [Oryza sa	0.589	0.540	0.447	5e-24
357127289	216	PREDICTED: reticulon-like protein B4-lik	0.594	0.555	0.419	6e-24
255561156	247	conserved hypothetical protein [Ricinus	0.613	0.502	0.429	9e-24
125524344	213	hypothetical protein OsI_00312 [Oryza sa	0.594	0.563	0.411	1e-23

>gi|225424075|ref|XP_002282955.1| PREDICTED: reticulon-like protein B9-like [Vitis vinifera]

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 61/117 (52%), Positives = 86/117 (73%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           LF  Q+ +H +LGGG VAD+LLW+N+ +SAAIL+  T+IW LFE+LEY+F+TLLCY + F
Sbjct: 18  LFDHQKSIHALLGGGKVADILLWRNKYVSAAILIGFTIIWFLFEVLEYHFVTLLCYSMLF 77

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKFYDISCGENLKL 138
           +M+ +FIWS  AG I  +PP VD+  LS+ T  S  + +N +L+ FY +S GE+L L
Sbjct: 78  LMLAIFIWSNGAGYINWNPPDVDKFTLSEHTVRSFHSKINTVLSTFYRVSRGEDLAL 134

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737775|emb|CBI26976.3| unnamed protein product [Vitis vinifera]

 Score =  135 bits (340), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 61/117 (52%), Positives = 86/117 (73%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           LF  Q+ +H +LGGG VAD+LLW+N+ +SAAIL+  T+IW LFE+LEY+F+TLLCY + F
Sbjct: 69  LFDHQKSIHALLGGGKVADILLWRNKYVSAAILIGFTIIWFLFEVLEYHFVTLLCYSMLF 128

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKFYDISCGENLKL 138
           +M+ +FIWS  AG I  +PP VD+  LS+ T  S  + +N +L+ FY +S GE+L L
Sbjct: 129 LMLAIFIWSNGAGYINWNPPDVDKFTLSEHTVRSFHSKINTVLSTFYRVSRGEDLAL 185

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723139|ref|NP_001238292.1| uncharacterized protein LOC100306402 [Glycine max] gi|255628421|gb|ACU14555.1| unknown [Glycine max]

 Score =  125 bits (315), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 59/126 (46%), Positives = 87/126 (69%), Gaps = 1/126 (0%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           L   QRPLH +LGGG +AD+LLWK++ LSAA++   ++IW LFE++EYNF+TLLC+ L  
Sbjct: 14  LLDRQRPLHAVLGGGKLADILLWKDKILSAAMVAGFSIIWFLFEVVEYNFLTLLCHILMA 73

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKFYDISCGENLKLYIL 141
           +M+ LF+W  AAGLI  + P + + ++ + T   LF  +N  L +FYDIS G++L L+ +
Sbjct: 74  VMLILFVWYNAAGLITWNLPQIYDFQIPEPTFRFLFQKLNSFLRRFYDISTGKDLTLFFV 133

Query: 142 AF-CAW 146
              C W
Sbjct: 134 TIACLW 139

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575584|ref|XP_003555919.1| PREDICTED: reticulon-like protein B9-like [Glycine max]

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 82/120 (68%)

Query: 26  QRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMIT 85
           QRPLH +LGGG +AD+LLWK++  SA+++   ++IW LFE++EYNF+TLLC+ L  IM+ 
Sbjct: 18  QRPLHAVLGGGKLADILLWKDKISSASMVAGFSIIWFLFEVVEYNFLTLLCHILMAIMLI 77

Query: 86  LFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKFYDISCGENLKLYILAFCA 145
           LF+W  AAGLI  + P + + ++ + T   LF   N  L +FYDIS G++L L+ +    
Sbjct: 78  LFVWYNAAGLITWNLPQIYDFQIPEPTFRFLFQKFNSFLRRFYDISTGKDLTLFFVTIAG 137

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218188884|gb|EEC71311.1| hypothetical protein OsI_03344 [Oryza sativa Indica Group] gi|222619085|gb|EEE55217.1| hypothetical protein OsJ_03084 [Oryza sativa Japonica Group]

 Score =  119 bits (297), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 7/138 (5%)

Query: 8   KNCNTDLNIIMSGCLFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEIL 67
           ++ ++D N+ M    F   + +H +LGGG VAD+LLWKNRNLSA +L   T+IW LF+++
Sbjct: 7   RDSDSDQNVRMP---FHGHKSIHKLLGGGQVADILLWKNRNLSAGVLAGATLIWFLFDVV 63

Query: 68  EYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTK- 126
           EYN I LLC      M+ +FIWS AA L+  +PP + EI +S+     +   V+  LT  
Sbjct: 64  EYNIIPLLCQIAILAMLVIFIWSNAAPLLDRAPPRIPEIIISEHAFREMALTVHYKLTYT 123

Query: 127 ---FYDISCGENLKLYIL 141
               YDI+CG++LK ++L
Sbjct: 124 VSVLYDIACGKDLKRFLL 141

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115434434|ref|NP_001041975.1| Os01g0139000 [Oryza sativa Japonica Group] gi|54290299|dbj|BAD61299.1| hypothetical protein [Oryza sativa Japonica Group] gi|54290837|dbj|BAD61476.1| hypothetical protein [Oryza sativa Japonica Group] gi|113531506|dbj|BAF03889.1| Os01g0139000 [Oryza sativa Japonica Group] gi|125568955|gb|EAZ10470.1| hypothetical protein OsJ_00305 [Oryza sativa Japonica Group]

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 81/124 (65%), Gaps = 4/124 (3%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           LFG +RPLHD LGG   AD++LW+ R +SA+I+   TV W LFE+ EY+F++L CY    
Sbjct: 13  LFGRERPLHDALGGHKAADIILWRERRVSASIVAGATVAWYLFEVAEYHFLSLACYLAML 72

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLT----KFYDISCGENLK 137
            M+ +FIW+ A+    +  P + EI +S+RT   +   ++  LT    + YDI+CG+++K
Sbjct: 73  GMLVVFIWANASAFFNLPAPRIPEIFVSERTTRQVILALHSRLTWFVHRLYDIACGKDIK 132

Query: 138 LYIL 141
           ++IL
Sbjct: 133 MFIL 136

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125553216|gb|EAY98925.1| hypothetical protein OsI_20880 [Oryza sativa Indica Group] gi|222632469|gb|EEE64601.1| hypothetical protein OsJ_19453 [Oryza sativa Japonica Group]

 Score =  116 bits (290), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/123 (44%), Positives = 79/123 (64%), Gaps = 4/123 (3%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           LF  Q+P+H ILGG  VAD++LW++RNLSA IL   T+IW LF++ EYN +TLLC+    
Sbjct: 19  LFHRQKPVHKILGGRKVADIMLWRDRNLSAGILAGATLIWFLFDVAEYNLVTLLCHIALL 78

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKF----YDISCGENLK 137
            M+ LFIWS AA L   +PP + E+ +S+     L   ++  +  F    YDISCG+ L+
Sbjct: 79  GMLVLFIWSNAAPLFDRAPPRIPEVIVSEHAFRELALTLHSKVAHFSAVLYDISCGKELR 138

Query: 138 LYI 140
            ++
Sbjct: 139 KFL 141

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357127289|ref|XP_003565315.1| PREDICTED: reticulon-like protein B4-like [Brachypodium distachyon]

 Score =  116 bits (290), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 81/124 (65%), Gaps = 4/124 (3%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           LFG +RPLH  LGG   AD++LW+ + +SA+IL   T  W+LFE+ E++F+TL CY    
Sbjct: 16  LFGRERPLHAALGGRQAADIILWRRKEVSASILGAATAAWVLFEVAEFHFLTLACYAAMI 75

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLT----KFYDISCGENLK 137
            M+T FIW+ A+G + +  P + E  LS+RT   +   ++  LT    + YDI+CG+++K
Sbjct: 76  AMLTFFIWTNASGFLNLPVPRIPETLLSERTARQVILGLHRRLTWFVYRLYDIACGKDIK 135

Query: 138 LYIL 141
           ++IL
Sbjct: 136 MFIL 139

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255561156|ref|XP_002521590.1| conserved hypothetical protein [Ricinus communis] gi|223539268|gb|EEF40861.1| conserved hypothetical protein [Ricinus communis]

 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 55/128 (42%), Positives = 81/128 (63%), Gaps = 4/128 (3%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           LFG Q+P+H +LGGG  AD+LLW+N+ +SA++L   T IW+LFE L Y+F+TL+C  L  
Sbjct: 45  LFGRQKPVHHLLGGGKSADVLLWRNKKISASVLTGATAIWILFEWLNYHFLTLVCLALVL 104

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANV----NCLLTKFYDISCGENLK 137
            M+  F+W+ A+GL+  SPP V  + L D    S+  +V    N  L    D+SCG NLK
Sbjct: 105 GMLAQFVWTNASGLVNRSPPKVPRLVLPDEVFVSIGRSVGVEINHALQFLQDVSCGGNLK 164

Query: 138 LYILAFCA 145
            +++   +
Sbjct: 165 QFLVVVAS 172

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125524344|gb|EAY72458.1| hypothetical protein OsI_00312 [Oryza sativa Indica Group]

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 80/124 (64%), Gaps = 4/124 (3%)

Query: 22  LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
           LFG +RPLHD LGG   AD++LW+ R +S +I+   TV W LFE+ EY+F++L CY    
Sbjct: 13  LFGRERPLHDALGGHKAADIILWRERRVSVSIVAGATVAWYLFEVAEYHFLSLACYLAML 72

Query: 82  IMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLT----KFYDISCGENLK 137
            M+ +FIW+ A+    +  P + EI +S+RT   +   ++  LT    + YDI+CG+++K
Sbjct: 73  GMLVVFIWANASAFFNLPAPRIPEIFVSERTTRQVILALHSRLTWFVHRLYDIACGKDIK 132

Query: 138 LYIL 141
           ++IL
Sbjct: 133 MFIL 136

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	202
TAIR|locus:2089663	225	AT3G18260 "AT3G18260" [Arabido	0.594	0.533	0.379	1.9e-21
TAIR|locus:2128494	275	BTI1 "VIRB2-interacting protei	0.618	0.454	0.338	1.9e-21
TAIR|locus:2160447	257	BTI3 "VIRB2-interacting protei	0.618	0.486	0.361	3e-21
TAIR|locus:2128238	271	BTI2 "VIRB2-interacting protei	0.618	0.461	0.338	8e-21
TAIR|locus:2062882	255	AT2G46170 [Arabidopsis thalian	0.594	0.470	0.362	1.5e-19
TAIR|locus:2080315	203	AT3G54120 "AT3G54120" [Arabido	0.846	0.842	0.278	9.5e-18
TAIR|locus:2082772	264	AT3G61560 [Arabidopsis thalian	0.351	0.268	0.492	3.2e-17
TAIR|locus:1005716554	249	AT3G10915 [Arabidopsis thalian	0.722	0.586	0.25	3.7e-13
TAIR|locus:2049077	201	AT2G15280 "AT2G15280" [Arabido	0.836	0.840	0.247	7.4e-11
TAIR|locus:2090609	218	AT3G19460 "AT3G19460" [Arabido	0.574	0.532	0.296	5.1e-09

TAIR|locus:2089663 AT3G18260 "AT3G18260" [Arabidopsis thaliana (taxid:3702)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 47/124 (37%), Positives = 74/124 (59%)

Query:    22 LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
             LF  QR +H I GGG VAD+LLW+   ++A +++ V+++W L E++EYNFITL+C+    
Sbjct:    23 LFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMT 82

Query:    82 IMITLFIWSKAAGLIPMSPPTVDEIRLSDRT----CTSLFANVNCLLTKFYDISCGENLK 137
              M+  FIWS A+  +    P + E+ L + +      S     N +LTK  D++CG +  
Sbjct:    83 SMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPP 142

Query:   138 LYIL 141
             L+ L
Sbjct:   143 LFFL 146

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2128494 BTI1 "VIRB2-interacting protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 44/130 (33%), Positives = 78/130 (60%)

Query:    22 LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
             LFG ++P+H +LGGG  AD+ +WKN+ +S  +L   T  W++FE++EY+ +TLLC+ +  
Sbjct:    73 LFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIV 132

Query:    82 IMITLFIWSKAAGLIPMSPPTVDEIRLSD----RTCTSLFANVNCLLTKFYDISCGENLK 137
             ++  LF+WS A   I  SPP + E+ + +    +  + L   +N   +   +I+ G +LK
Sbjct:   133 VLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLK 192

Query:   138 LYILAFCA-W 146
              +++A    W
Sbjct:   193 KFLIAIAGLW 202

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0071458 "integral to cytosolic side of endoplasmic reticulum membrane" evidence=IDA

GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=IMP

TAIR|locus:2160447 BTI3 "VIRB2-interacting protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 47/130 (36%), Positives = 76/130 (58%)

Query:    22 LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
             LFG ++P+H +LGGG  AD+ LW+N+ +S  +L  VT  W+LFE+ EY+ +  LC+F  F
Sbjct:    52 LFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIF 111

Query:    82 IMITLFIWSKAAGLIPMSPPTVDEIRLSD----RTCTSLFANVNCLLTKFYDISCGENLK 137
              +  LF+WS A   I  S P + E+ + +    +  + L   +N  LT   +I+ G+++K
Sbjct:   112 ALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVK 171

Query:   138 LYILAFCA-W 146
              +IL     W
Sbjct:   172 KFILVIAGLW 181

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0071458 "integral to cytosolic side of endoplasmic reticulum membrane" evidence=IDA

GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2128238 BTI2 "VIRB2-interacting protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 44/130 (33%), Positives = 77/130 (59%)

Query:    22 LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
             LFG +RP+H +LGGG  AD+ +WK++ +S  +    TV W+LFE++EY+ +TLLC+ +  
Sbjct:    69 LFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIV 128

Query:    82 IMITLFIWSKAAGLIPMSPPTVDEIRLSD----RTCTSLFANVNCLLTKFYDISCGENLK 137
              +  LF+WS A   I  SPP + E+ + +    +  + L   +N  ++   +I+ G ++K
Sbjct:   129 ALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIK 188

Query:   138 LYILAFCA-W 146
              ++ A    W
Sbjct:   189 KFLSAIAGLW 198

GO:0005634 "nucleus" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0071458 "integral to cytosolic side of endoplasmic reticulum membrane" evidence=IDA

GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0010286 "heat acclimation" evidence=RCA

TAIR|locus:2062882 AT2G46170 [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 45/124 (36%), Positives = 75/124 (60%)

Query:    22 LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
             +FG ++P+H +LGGG  AD+ LW+++ LS A+L V T IW+LFE++EY+ ++LLC+    
Sbjct:    52 MFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISIL 111

Query:    82 IMITLFIWSKAAGLIPMSPPTVDEIRLSDRT----CTSLFANVNCLLTKFYDISCGENLK 137
              +  LF+WS A  LI  + P + EI + +       +SL   +N        I+ G +LK
Sbjct:   112 ALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLK 171

Query:   138 LYIL 141
              +++
Sbjct:   172 KFLM 175

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0080167 "response to karrikin" evidence=IEP

GO:0006007 "glucose catabolic process" evidence=RCA

TAIR|locus:2080315 AT3G54120 "AT3G54120" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 51/183 (27%), Positives = 92/183 (50%)

Query:    22 LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
             LF   R +H+ILGGG VAD++LW+ +N+S  I+ V    W++FE   Y   TL+   L  
Sbjct:     8 LFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLL 67

Query:    82 IMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTS----LFANVNCLLTKFYDISCGENLK 137
             ++  LF+WSK+A ++    P + E ++S+         L  +VN LL   +DI+   + +
Sbjct:    68 LLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSE 127

Query:   138 LYILAFCAWKHYRLCICDFKGRWIILPLKVLKTCGGCLTISIPKFLTRFQGHLLKK-RSI 196
             LY     +     L +    G   ++  + L      + +++P F  R++ +++     I
Sbjct:   128 LYTKVAVS-----LFLLSLIGS--LMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFI 180

Query:   197 CEQ 199
             C +
Sbjct:   181 CNK 183

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2082772 AT3G61560 [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 35/71 (49%), Positives = 55/71 (77%)

Query:    22 LFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCF 81
             LFG ++P+H +LGGG  AD+ LW+++ LSA++L V T IW+LFE++EY+F++L+C+ L F
Sbjct:    52 LFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIF 111

Query:    82 IMITLFIWSKA 92
              +  LF+ S A
Sbjct:   112 ALAALFLLSNA 122

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:1005716554 AT3G10915 [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
 Identities = 40/160 (25%), Positives = 80/160 (50%)

Query:    39 ADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPM 98
             AD+LLW+ R+LS  ++++ TV WL+FE     F+++    L  +++  F+ ++ +     
Sbjct:    64 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 123

Query:    99 SPPTVDEIRLSDRTCTSLFAN----VNCLLTKFYDISCGENLKLYI--LAFCAWKHYRLC 152
                ++ E+ LS+    S  A+    +N LL   +D++ G + +L+   +  C W      
Sbjct:   124 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLW------ 177

Query:   153 ICDFKGRWIILPLKVLKTCGGCLTISIPKFLTRFQGHLLK 192
             +    G +I   L  L   G  L+++IP   +++Q  + K
Sbjct:   178 LLSAIGSYI--SLCTLLYIGTILSVTIPALYSKYQSKVDK 215

GO:0005634 "nucleus" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2049077 AT2G15280 "AT2G15280" [Arabidopsis thaliana (taxid:3702)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 45/182 (24%), Positives = 86/182 (47%)

Query:    25 LQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMI 84
             ++  +H  +  G+VAD+++WKNR     +L   T++W LFE   Y+F   +       ++
Sbjct:     1 MEESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVV 60

Query:    85 TLFIWSKAAGLIPMSPPTVDEIRLSDR----TCTSLFANVNCLLTKFYDISCGENLK-LY 139
              LF+W+K+A L     P +  + +++        ++   +N +L    +I  G N K L+
Sbjct:    61 ILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLF 120

Query:   140 ILAFCAWKHYRLCICDFKGRWIILPLKVLKTCGGCLTISIPKFLTRFQGHLLKKRSICEQ 199
              ++   W         F G ++   L +L   G  L++ IP    R+Q  + +K S+  +
Sbjct:   121 RVSVVLWT------VSFVGNFLNF-LTILYL-GVVLSLLIPFLYERYQDLIDEKLSLTHR 172

Query:   200 GI 201
              I
Sbjct:   173 VI 174

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2090609 AT3G19460 "AT3G19460" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
 Identities = 37/125 (29%), Positives = 65/125 (52%)

Query:    38 VADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLI- 96
             VAD+LLW+NR  +  +L+  T  W LFE   YN ++ +   L  ++   F+W+K+A ++ 
Sbjct:     6 VADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLN 65

Query:    97 -PMSPPTVDEI--RLSDRTCTSLFANVNCLLTKFYDISCGEN-LKLYILAFC-AWKHYRL 151
              P+ P    EI    +++    L   +N +L+   DI+   N ++L  + F   W+   +
Sbjct:    66 RPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLWQ--TI 123

Query:   152 CICDF 156
             C C F
Sbjct:   124 C-CIF 127

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	202
pfam02453	164	pfam02453, Reticulon, Reticulon	3e-20

>gnl|CDD|217046 pfam02453, Reticulon, Reticulon

 Score = 82.6 bits (205), Expect = 3e-20
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 5/111 (4%)

Query: 38  VADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIP 97
           VAD+LLW++   S  +   + VIWLLF +  Y+ +++L Y L  ++   F+W  A  L+ 
Sbjct: 1   VADLLLWRDPKKSGVVFGSLLVIWLLFSLSGYSLLSVLSYLLLLLLAVTFLWRLAKKLLN 60

Query: 98  MSP-PTVDEIRLS----DRTCTSLFANVNCLLTKFYDISCGENLKLYILAF 143
             P P   ++ LS    +    SL   +N  L +   +  GE+L   + A 
Sbjct: 61  AVPEPLDPDVTLSEETVEEIADSLRVLINKALKELRRLFLGEDLVDSLKAA 111

Reticulon, also know as neuroendocrine-specific protein (NSP), is a protein of unknown function which associates with the endoplasmic reticulum. This family represents the C-terminal domain of the three reticulon isoforms and their homologues. Length = 164

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	202
KOG1792	230	consensus Reticulon [Intracellular trafficking, se	100.0
PF02453	169	Reticulon: Reticulon; InterPro: IPR003388 Eukaryot	100.0
PF04842	683	DUF639: Plant protein of unknown function (DUF639)	80.84

>KOG1792 consensus Reticulon [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.8e-48  Score=336.38  Aligned_cols=179  Identities=33%  Similarity=0.606  Sum_probs=172.2

Q ss_pred             CccccCCCCCCCCccccccCCCceeeeeeeccccchhHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhc
Q 046521           15 NIIMSGCLFGLQRPLHDILGGGTVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAG   94 (202)
Q Consensus        15 ~~~~~~~~f~r~~~~h~~LGgg~vaDlLlWRd~k~Sg~vl~~~t~~w~Lf~~~~ys~iSlv~~~ll~~l~~lFi~s~~~~   94 (202)
                      .+...+|+|+||+|+|+.+|||+++|+++|||+|.||++++++++.|++|+..+|+++|++|+++++.+.++|.|+++..
T Consensus        20 ~~~~~~rlf~~~~~v~~~lg~~~vaDlllWrdkk~s~~vl~~~~~~w~lf~~~~~~~vt~~~~i~ll~~~i~F~w~~~~~   99 (230)
T KOG1792|consen   20 AIEKSSRLFGREGPVHKVLGGGKVADLLLWRDKKKSGTVLGVATALWLLFEFFSYNSVTLLCHILLLALAILFLWSKAVT   99 (230)
T ss_pred             ccchhccccCCCccccccCCCCchhheeeeeccccceeehHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56788999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             ccCC-CCC--CCC-ceeechHHHH----HHHHHHHHHHHHhhhhccccCHHHHHH-HHHHHhccccccceEeccccccch
Q 046521           95 LIPM-SPP--TVD-EIRLSDRTCT----SLFANVNCLLTKFYDISCGENLKLYIL-AFCAWKHYRLCICDFKGRWIILPL  165 (202)
Q Consensus        95 ~~~~-~~p--~~p-~i~lsee~~~----~~~~~iN~~l~~l~~l~~g~d~~~~lk-~~~L~~~~~~~~ls~vGs~fs~~l  165 (202)
                      +++| ++|  ..| |+++|||.+.    +++.++|+.++++|++++|+|+++|+| ++.+|+      +|++|+|||+ +
T Consensus       100 ~~~k~~~~~~~lp~~i~ipee~~~~~a~~~~~~in~~l~~l~~ia~~~d~~~~lk~~v~lw~------lS~vGs~fn~-l  172 (230)
T KOG1792|consen  100 FLNKKSEPGAYLPVEITIPEEFVLALASSLRVEINQALSELRDIALGRDLKDFLKVAVGLWI------LSYVGSLFNF-L  172 (230)
T ss_pred             HHhcCCCccccCCceeecCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH------HHHHHHhhhH-H
Confidence            8888 777  788 9999999999    888899999999999999999999999 999999      9999999999 9


Q ss_pred             hHHHHhhhhhhhhhhHHHhhchHHHHHHHHHHhhcC
Q 046521          166 KVLKTCGGCLTISIPKFLTRFQGHLLKKRSICEQGI  201 (202)
Q Consensus       166 TLl~i~~v~~~fTlP~~Yekyq~~ID~~~~~~~~~~  201 (202)
                      |++|+|++ ++||+|++||||||+||++++.+++++
T Consensus       173 Tll~ig~v-~~~TvP~~YEky~d~ID~~~~~~~~~~  207 (230)
T KOG1792|consen  173 TLLYIGLV-LLFTVPVLYEKYEDQIDPYLGKVMEEL  207 (230)
T ss_pred             HHHHHHHH-HHhcccchhHHhHHHHhHHHHHHHHHH
Confidence            99999999 999999999999999999999998763

>PF02453 Reticulon: Reticulon; InterPro: IPR003388 Eukaryotic proteins of the reticulon (RTN) family all share an association with the endoplasmic reticulum (ER)

Probab=100.00  E-value=1.6e-36  Score=243.75  Aligned_cols=156  Identities=22%  Similarity=0.467  Sum_probs=43.6

Q ss_pred             eeeeeeeccccchhHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhcccCCCC------CCCCceeechH
Q 046521           38 VADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSP------PTVDEIRLSDR  111 (202)
Q Consensus        38 vaDlLlWRd~k~Sg~vl~~~t~~w~Lf~~~~ys~iSlv~~~ll~~l~~lFi~s~~~~~~~~~~------p~~p~i~lsee  111 (202)
                      |+|+++||||+.||.+|++++++|+++.+++||++|++|+++++++.+.+.+....+.+++.+      |+.++.++|||
T Consensus         1 V~dll~W~~~~~S~~v~~~~~~~~~l~~~~~~s~is~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (169)
T PF02453_consen    1 VADLLLWRDPKKSGIVFGAILLFWLLFWLFNYSLISLVSYILLLLLAISFLYRLLSKVLSRSPKGPFKEPLDYDLEISEE   80 (169)
T ss_dssp             ----------------------------------------------------THCCCTCCHHHHCTTHHHHCHHHHHCCH
T ss_pred             CceeeEecCCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccCCccccccccHH
Confidence            689999999999999999999999999999999999999999999999999999999898866      45557899999


Q ss_pred             HHH----HHHHHHHHHHHHhhhhccccCHHHHHH-HHHHHhccccccceEeccccccchhHHHHhhhhhhhhhhHHHhhc
Q 046521          112 TCT----SLFANVNCLLTKFYDISCGENLKLYIL-AFCAWKHYRLCICDFKGRWIILPLKVLKTCGGCLTISIPKFLTRF  186 (202)
Q Consensus       112 ~~~----~~~~~iN~~l~~l~~l~~g~d~~~~lk-~~~L~~~~~~~~ls~vGs~fs~~lTLl~i~~v~~~fTlP~~Yeky  186 (202)
                      .++    ++++.+|+.+..+|++..++|++.++| ++++|+      ++++|+++|+ +|++|++++ ++||+|.+||+|
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~l~~~~~l~~------l~~lg~~~s~-~~L~~l~~~-~~f~~P~ly~~~  152 (169)
T PF02453_consen   81 RVERLADSVAEWINSVLSWLRRLVFGEDPKKSLKVFVVLYI------LSFLGSWFSF-LTLLYLGVL-GAFTVPKLYEKY  152 (169)
T ss_dssp             HHHHHHHHCCCCCCHHHHHHHCCCHCT-TTGGG-----------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHH------HHHHHHHcCH-HHHHHHHHH-HHHhhHHHHHHH
Confidence            888    666688999999999999999999999 999999      9999999999 999999999 999999999999


Q ss_pred             hHHHHHHHHHHhhcC
Q 046521          187 QGHLLKKRSICEQGI  201 (202)
Q Consensus       187 q~~ID~~~~~~~~~~  201 (202)
                      |++||++++++++|+
T Consensus       153 ~~~Id~~~~~~~~~~  167 (169)
T PF02453_consen  153 QEEIDQYVAKVKEKV  167 (169)
T ss_dssp             ---------------
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999999986

Whereas amino-terminal regions are not related to one another, all reticulon proteins share a 200 amino acid residue region of sequence similarity at the C-terminal. This region contains two large hydrophobic regions separated by a 66 residue hydrophilic segment. The conserved hydrophobic C-terminal portion has been shown to play an essential role in the association of reticulons with the ER membrane. The hydrophobic portions are supposed to be membrane-embedded and the hydrophilic 66 residue localized to the lumenal/extracellular face of the membrane. Most reticulons have a di-lysine ER retention motif at the C-terminal. Because of their likely association with the rough as well as the smooth ER, the reticulons might play some role in transport processes or in regulation of intracellular calcium levels. It has been suggested that the reticulons may be serving as ER-associated channel-like complexes [, , , ].; GO: 0005783 endoplasmic reticulum; PDB: 2KO2_A 2JV5_A 2G31_A.

>PF04842 DUF639: Plant protein of unknown function (DUF639); InterPro: IPR006927 The sequences in this family are plant proteins of unknown function

Probab=80.84  E-value=7.5  Score=39.17  Aligned_cols=105  Identities=15%  Similarity=0.222  Sum_probs=60.3

Q ss_pred             ceeeeeeeccccchhHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhcccCCC--------CCCCC---c
Q 046521           37 TVADMLLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMS--------PPTVD---E  105 (202)
Q Consensus        37 ~vaDlLlWRd~k~Sg~vl~~~t~~w~Lf~~~~ys~iSlv~~~ll~~l~~lFi~s~~~~~~~~~--------~p~~p---~  105 (202)
                      ...++..|+||.+|...++....+.+ =.+.+|-+-++     ++.+++..+|.+-.+-.+|.        +|+-.   .
T Consensus       505 ~~~~l~~We~P~kt~~Fl~~~~~iI~-r~wl~Y~~p~~-----Ll~~a~~Ml~~r~~~~~g~~~~~v~V~~pP~~nTvEq  578 (683)
T PF04842_consen  505 WLQKLASWEEPLKTLVFLALFLYIIY-RGWLGYIFPAF-----LLFSAVFMLWLRYQGRLGKSFGEVTVRDPPPKNTVEQ  578 (683)
T ss_pred             HHHHHhhccCcchhHHHHHHHHHHHH-HHHHHHHHHHH-----HHHHHHHHHHHHhhhccCCccceEEecCCCCccHHHH
Confidence            44578899999999998877654322 23444443332     22223333443332122221        12111   1


Q ss_pred             eeechHHHH---HHHHHHHHHHHHhhhhccccCHHHHHH-HHHHHh
Q 046521          106 IRLSDRTCT---SLFANVNCLLTKFYDISCGENLKLYIL-AFCAWK  147 (202)
Q Consensus       106 i~lsee~~~---~~~~~iN~~l~~l~~l~~g~d~~~~lk-~~~L~~  147 (202)
                      +--=++...   ......|-++-++|.|.+....+-+-+ ++.|-.
T Consensus       579 ilalQ~Ais~~E~~iQ~~NI~LLKiRsllls~~PqaT~~Va~~Ll~  624 (683)
T PF04842_consen  579 ILALQEAISQLEEYIQAANIVLLKIRSLLLSKFPQATNKVALALLG  624 (683)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence            111112222   677788999999999999999998888 666655

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	202
2ko2_A	79	Reticulon-4; NOGO, membrane protein, peripheral, D	97.95
2g31_A	60	Reticulon-4; NOGO, helix, signaling protein; NMR {	96.93

>2ko2_A Reticulon-4; NOGO, membrane protein, peripheral, DPC micelle, myelin INHI endoplasmic reticulum, membrane, phosphoprotein, transmembr; NMR {Mus musculus}

Probab=97.95  E-value=3.6e-07  Score=66.68  Aligned_cols=57  Identities=16%  Similarity=0.160  Sum_probs=51.5

Q ss_pred             HHHHHHHHhcccCCCCCCCC-------ceeechHHHH----HHHHHHHHHHHHhhhhccccCHHHHHH
Q 046521           85 TLFIWSKAAGLIPMSPPTVD-------EIRLSDRTCT----SLFANVNCLLTKFYDISCGENLKLYIL  141 (202)
Q Consensus        85 ~lFi~s~~~~~~~~~~p~~p-------~i~lsee~~~----~~~~~iN~~l~~l~~l~~g~d~~~~lk  141 (202)
                      .+.+|+++.+.++|++..+|       |+.+|+|.++    .+..++|+++..+|+++++||+.+|+|
T Consensus        12 sfRiYk~vlqavqKtd~~hPFk~YLd~Di~ls~E~~~~~~~~~v~~in~~l~~LRrLfLVedlvDSLK   79 (79)
T 2ko2_A           12 GMRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLK   79 (79)
T ss_dssp             -CTHHHHTHHHHHCTTTTCCSHHHHHHHHHHTTCHHHHHHHCTTTHHHHHHHHHHHHHHHTCTTGGGC
T ss_pred             HHHHHHHHHHHHHhCCCCCCccccccccccCCHHHHHHHHHHHHHHHHHHHHHHhHHhhcccHHHhcC
Confidence            34589999999999999999       9999999998    777889999999999999999999876

>2g31_A Reticulon-4; NOGO, helix, signaling protein; NMR {Homo sapiens} PDB: 2jv5_A

Probab=96.93  E-value=9.3e-06  Score=56.21  Aligned_cols=47  Identities=17%  Similarity=0.277  Sum_probs=40.7

Q ss_pred             HHHHhcccCCCCCCCC-------ceeechHHHH----HHHHHHHHHHHHhhhhccccC
Q 046521           89 WSKAAGLIPMSPPTVD-------EIRLSDRTCT----SLFANVNCLLTKFYDISCGEN  135 (202)
Q Consensus        89 ~s~~~~~~~~~~p~~p-------~i~lsee~~~----~~~~~iN~~l~~l~~l~~g~d  135 (202)
                      |.++.+.++|++..+|       |+.+|+|.++    .+..++|+++..+|+++++||
T Consensus         3 Yk~vlqavqKt~~~hPFk~yLd~di~ls~e~~~~~~~~~v~~in~~l~~lrrLfLVed   60 (60)
T 2g31_A            3 YKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDD   60 (60)
T ss_dssp             CCTTTTHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHGGGTCHHHHHHHHTSSCTTC
T ss_pred             HHHHHHHHHhCCCCCCchhccccCcCCCHHHHHHHHHHHHHHHHHHHHHHhHhhccCC
Confidence            4556677788888888       9999999999    777889999999999999987

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00