Citrus Sinensis ID: 046550

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-----
Protein Sequence
DVSPRKYGGLSYSTENVGQVLAISSAKLKMLLVLSIPLLTSYIAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAVSLTKTAGPAVGGAIFSWSQKRQDAGFLPVLGLIS
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc
Coil and Loop (DISEMBL)
dvsprkygglsysteNVGQVLAISSAKLKMLLVLSIPLLTSYIAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAVSltktagpavggaifswsqkrqdagflpvlglis
Flexible Loop (DISEMBL)
dvsprkygglsystenvGQVLAISSAKLKMLLVLSIPLLTSYIAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAVSLTKTAGPAVGGAIFswsqkrqdagflpvlglis
Low Complexity Region (SEG)
DVSPRKYGGLSYSTENVGQVLAISSAKLKMLLVLSIPLLTSYIAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAVSLTKTAGPAVGGAIFSWSQKRQDAGFLPVLGLIS
Disordered region (IsUnstruct)
**********SYSTENVGQVLAISSAKLKMLLVLSIPLLTSYIAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAVSLTKTAGPAVGGAIFSWSQKRQDAGFLPVLGL**
Disordered Region (DISOPRED)
***PRKYGGLSYSTENVGQVLAISSAKLKMLLVLSIPLLTSYIAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAVSLTKTAGPAVGGAIFSWSQKRQDAGFLPVLGLI*
Disordered Region (DISEMBL)
DVSPRKYGGLSYSTENVGQVLAISSAKLKMLLVLSIPLLTSYIAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAVSLTKTAGPAVGGAIFSWSQKRQDAGFLPVLGLIS
Disordered Region (DISPRO)
*****KYGGLSYSTENVGQVLAISSAKLKMLLVLSIPLLTSYIAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAVSLTKTAGPAVGGAIFSWSQKRQDAGFLPV*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
DVSPRKYGGLSYSTENVGQVLAISSAKLKMLLVLSIPLLTSYIAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAVSLTKTAGPAVGGAIFSWSQKRQDAGFLPVLGLIS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	115	2.2.26 [Sep-21-2011]
Q3EAQ5	484	Probable peptide/nitrate	yes	no	0.939	0.223	0.448	3e-24
Q8RWN2	486	Protein ZINC INDUCED FACI	no	no	0.930	0.220	0.431	2e-19
Q94BZ1	478	Protein ZINC INDUCED FACI	no	no	0.895	0.215	0.42	2e-18

>sp|Q3EAQ5|PTR36_ARATH Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2

 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/147 (44%), Positives = 90/147 (61%), Gaps = 39/147 (26%)

Query: 2   VSPRKYGGLSYSTENVGQVLAISS---------------------AKLKMLLVLSIPLLT 40
           VS R YGGLS+S+++VG+VLAIS                      A +++  VL IPLL+
Sbjct: 303 VSDRSYGGLSFSSQDVGEVLAISGLGLLVFQLLVYPPLEKSVGLLAVIRLSAVLLIPLLS 362

Query: 41  SY--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV----------------S 82
            Y  IA+LSG +  L+INCAS++KN LS+S++TGLF++ N+AV                S
Sbjct: 363 CYPYIALLSGVTLHLVINCASIIKNALSISLVTGLFIMLNKAVPQNQRGAANGISMTAMS 422

Query: 83  LTKTAGPAVGGAIFSWSQKRQDAGFLP 109
           + K+ GPA GG +FSW+QKRQDA FLP
Sbjct: 423 VFKSFGPAGGGVLFSWAQKRQDATFLP 449

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RWN2|ZIF1_ARATH Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 77/146 (52%), Gaps = 39/146 (26%)

Query: 3   SPRKYGGLSYSTENVGQVLAISSAKLKMLLVLSIPLLTSYIA--MLSGFSRALLI----- 55
           SPRKYGGLSYST  VG VLAIS   L    V   PL    +   +++ ++ AL+I     
Sbjct: 311 SPRKYGGLSYSTNEVGTVLAISGLGLFSFQVFVYPLAEKLLGPVLVTRYAGALMIPIQMS 370

Query: 56  ----------------NCASVMKNVLSVSIITGLFLLQNRAV----------------SL 83
                           NCAS++ NVLSVS ITGL +LQNRAV                SL
Sbjct: 371 YPFIAGLSGLSLSLMLNCASILINVLSVSAITGLLILQNRAVDQSQRGAANGIAMTAMSL 430

Query: 84  TKTAGPAVGGAIFSWSQKRQDAGFLP 109
            KT GPA  G +FSWS++R +A FLP
Sbjct: 431 FKTVGPAGAGILFSWSERRLNAAFLP 456

Major facilitator superfamily (MFS) transporter involved in zinc tolerance by participating in vacuolar sequestration of zinc.

Arabidopsis thaliana (taxid: 3702)

>sp|Q94BZ1|ZIFL1_ARATH Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 74/150 (49%), Gaps = 47/150 (31%)

Query: 3   SPRKYGGLSYSTENVGQVLAIS---------------------------SAKLKMLLVLS 35
           SPRKYGGL YST +VG VLA S                           S  L M+++  
Sbjct: 303 SPRKYGGLGYSTADVGSVLAFSGFGLLIFQLSLYSYAERLLGPIIVTRISGSLAMVVLSC 362

Query: 36  IPLLTSYIAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV-------------- 81
            PL    IA LSG +  + +  ASV K+VL  S ITGLF+LQN+AV              
Sbjct: 363 YPL----IAKLSGLALTVTVTSASVAKSVLGTSAITGLFILQNKAVRQDQRGAANGIAMT 418

Query: 82  --SLTKTAGPAVGGAIFSWSQKRQDAGFLP 109
             SL K  GPA  G IFSWS+KRQ A FLP
Sbjct: 419 AMSLFKAIGPAAAGIIFSWSEKRQGAAFLP 448

Major facilitator superfamily (MFS) transporter probably involved in 2,4-dichlorophenoxyacetic acid (2,4-D) export.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
296085441	163	unnamed protein product [Vitis vinifera]	0.939	0.662	0.551	2e-26
359487104	1624	PREDICTED: uncharacterized protein LOC10	0.939	0.066	0.537	2e-25
296085436	518	unnamed protein product [Vitis vinifera]	0.939	0.208	0.537	3e-25
224086687	478	predicted protein [Populus trichocarpa]	0.939	0.225	0.496	4e-25
255567998	384	Multidrug resistance protein mdtG, putat	0.939	0.281	0.551	5e-25
357456173	245	hypothetical protein MTR_3g010820 [Medic	0.939	0.440	0.482	7e-24
359481459	490	PREDICTED: protein ZINC INDUCED FACILITA	0.939	0.220	0.489	7e-24
224097490	495	predicted protein [Populus trichocarpa]	0.930	0.216	0.486	1e-23
7362779	479	transporter-like protein [Arabidopsis th	0.939	0.225	0.448	1e-22
42572573	484	zinc induced facilitator-like 2 protein	0.939	0.223	0.448	1e-22

>gi|296085441|emb|CBI29173.3| unnamed protein product [Vitis vinifera]

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/147 (55%), Positives = 88/147 (59%), Gaps = 39/147 (26%)

Query: 2   VSPRKYGGLSYSTENVGQVLAISS-----------AKLKMLL----------VLSIPLLT 40
           VSPRKYGGLSYST++VG VLAIS              L+ LL          VLSIPLL 
Sbjct: 15  VSPRKYGGLSYSTDDVGVVLAISGFGVLVFQLSLYPYLEKLLGPIIICRIAGVLSIPLLA 74

Query: 41  SY--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV----------------S 82
            Y  IAMLSGFS +L +NCAS MKNVLSVSI TGL +LQNRAV                S
Sbjct: 75  IYPLIAMLSGFSLSLALNCASAMKNVLSVSIGTGLIILQNRAVEQHQRGAANGITMTTMS 134

Query: 83  LTKTAGPAVGGAIFSWSQKRQDAGFLP 109
           L K AGPA GG IFSW+Q RQ A F P
Sbjct: 135 LFKAAGPAGGGVIFSWAQGRQRAAFFP 161

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487104|ref|XP_002274088.2| PREDICTED: uncharacterized protein LOC100259102 [Vitis vinifera]

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/147 (53%), Positives = 87/147 (59%), Gaps = 39/147 (26%)

Query: 2    VSPRKYGGLSYSTENVGQVLAISS-----------AKLKMLL----------VLSIPLLT 40
            VSPRKYGGLSYST++VG VLAIS              L+ LL          VLSIPLL 
Sbjct: 1448 VSPRKYGGLSYSTDDVGVVLAISGFGVLVFQLFLYPYLEKLLGPIIICRIAGVLSIPLLA 1507

Query: 41   SY--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV----------------S 82
             Y  IAMLSGF+ +L +NCAS MKNVLSVSI T L +LQNRAV                S
Sbjct: 1508 IYPLIAMLSGFNLSLALNCASAMKNVLSVSIGTSLIILQNRAVEQHQRGAANGITMTTMS 1567

Query: 83   LTKTAGPAVGGAIFSWSQKRQDAGFLP 109
            L K AGPA GG IFSW+Q RQ A F P
Sbjct: 1568 LFKAAGPAGGGVIFSWAQGRQRAAFFP 1594

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085436|emb|CBI29168.3| unnamed protein product [Vitis vinifera]

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/147 (53%), Positives = 87/147 (59%), Gaps = 39/147 (26%)

Query: 2   VSPRKYGGLSYSTENVGQVLAISS-----------AKLKMLL----------VLSIPLLT 40
           VSPRKYGGLSYST++VG VLAIS              L+ LL          VLSIPLL 
Sbjct: 342 VSPRKYGGLSYSTDDVGVVLAISGFGVLVFQLFLYPYLEKLLGPIIICRIAGVLSIPLLA 401

Query: 41  SY--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV----------------S 82
            Y  IAMLSGF+ +L +NCAS MKNVLSVSI T L +LQNRAV                S
Sbjct: 402 IYPLIAMLSGFNLSLALNCASAMKNVLSVSIGTSLIILQNRAVEQHQRGAANGITMTTMS 461

Query: 83  LTKTAGPAVGGAIFSWSQKRQDAGFLP 109
           L K AGPA GG IFSW+Q RQ A F P
Sbjct: 462 LFKAAGPAGGGVIFSWAQGRQRAAFFP 488

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086687|ref|XP_002307932.1| predicted protein [Populus trichocarpa] gi|222853908|gb|EEE91455.1| predicted protein [Populus trichocarpa]

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/147 (49%), Positives = 89/147 (60%), Gaps = 39/147 (26%)

Query: 2   VSPRKYGGLSYSTENVGQVLAISSAKL---------------------KMLLVLSIPLLT 40
           VSPRK GGLS+ST +VG+VLA S   L                     ++  VL+IPLL+
Sbjct: 299 VSPRKNGGLSFSTADVGEVLAFSGLGLLLFQLFIYPLVERNFGPVMVSRIGAVLTIPLLS 358

Query: 41  SY--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNR----------------AVS 82
           SY  +AML G +  LLINCAS++KNVL+VSI TGLFLLQNR                A+S
Sbjct: 359 SYPFLAMLKGLALMLLINCASILKNVLAVSITTGLFLLQNRSVTQQQRGAANGISMSAMS 418

Query: 83  LTKTAGPAVGGAIFSWSQKRQDAGFLP 109
           L K  GPA GG++FSW+QKRQDA F P
Sbjct: 419 LFKAIGPAAGGSLFSWAQKRQDAFFFP 445

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567998|ref|XP_002524976.1| Multidrug resistance protein mdtG, putative [Ricinus communis] gi|223535720|gb|EEF37383.1| Multidrug resistance protein mdtG, putative [Ricinus communis]

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/147 (55%), Positives = 96/147 (65%), Gaps = 39/147 (26%)

Query: 2   VSPRKYGGLSYSTENVGQVLAISSAKL---------------------KMLLVLSIPLLT 40
           VSPR++GGLSYST++VG+VLAIS   L                     ++  VLSIPLL 
Sbjct: 238 VSPRRFGGLSYSTQDVGEVLAISGFSLLVFQLSLYPYMERIFGPITLFRIAGVLSIPLLA 297

Query: 41  SY--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV----------------S 82
           SY  IAMLSGFS  L++NCAS++KNVLSVSIITGLFLLQNRAV                S
Sbjct: 298 SYPFIAMLSGFSLTLMLNCASILKNVLSVSIITGLFLLQNRAVDQHQRGAANGIAMTAMS 357

Query: 83  LTKTAGPAVGGAIFSWSQKRQDAGFLP 109
           L K AGPA GGA+FSW+QKR++A FLP
Sbjct: 358 LFKAAGPAGGGALFSWAQKRRNATFLP 384

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357456173|ref|XP_003598367.1| hypothetical protein MTR_3g010820 [Medicago truncatula] gi|355487415|gb|AES68618.1| hypothetical protein MTR_3g010820 [Medicago truncatula]

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/147 (48%), Positives = 89/147 (60%), Gaps = 39/147 (26%)

Query: 2   VSPRKYGGLSYSTENVGQVLAISSAKL---------------------KMLLVLSIPLLT 40
           VSPR+ GGL+++TENVG VLAIS   L                     ++  VL+IP+L 
Sbjct: 62  VSPRRLGGLNFTTENVGDVLAISGIGLIVYQLSLYPSLEKSFGPARFARISGVLAIPILQ 121

Query: 41  SY--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV----------------S 82
           SY  IAMLSG +  L+IN AS++KN+LSV+IITGLFL+QNRAV                S
Sbjct: 122 SYPFIAMLSGITLYLVINIASLLKNILSVTIITGLFLMQNRAVEQRQRGAANGIAMTGMS 181

Query: 83  LTKTAGPAVGGAIFSWSQKRQDAGFLP 109
           + KT GPA GGA+ +WSQKR  A FLP
Sbjct: 182 IFKTIGPAGGGAVLAWSQKRMHASFLP 208

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481459|ref|XP_003632620.1| PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Vitis vinifera] gi|297741718|emb|CBI32850.3| unnamed protein product [Vitis vinifera]

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/147 (48%), Positives = 89/147 (60%), Gaps = 39/147 (26%)

Query: 2   VSPRKYGGLSYSTENVGQVLAISS-----------AKLKMLL----------VLSIPLLT 40
           +SP +YGGLSYST +VG+VLA+S              L+ +L          VL++PLL+
Sbjct: 311 ISPSEYGGLSYSTADVGEVLAMSGLGLLLFQLFLYPPLERILGPVMVSRIGAVLTVPLLS 370

Query: 41  SY--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV----------------S 82
           SY  IAMLSG   +LLINCAS++KNVL VSI TGLFLLQNRAV                S
Sbjct: 371 SYPLIAMLSGVGLSLLINCASLLKNVLCVSITTGLFLLQNRAVTQQQRGAANGISMSAMS 430

Query: 83  LTKTAGPAVGGAIFSWSQKRQDAGFLP 109
             K  GPA GG++FSW+ KRQ+  FLP
Sbjct: 431 FFKAVGPAGGGSLFSWALKRQNDSFLP 457

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097490|ref|XP_002310957.1| predicted protein [Populus trichocarpa] gi|222850777|gb|EEE88324.1| predicted protein [Populus trichocarpa]

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/146 (48%), Positives = 86/146 (58%), Gaps = 39/146 (26%)

Query: 3   SPRKYGGLSYSTENVGQVLAISSAKL---------------------KMLLVLSIPLLTS 41
           S RK GGL Y+TE+VG+VLAIS   L                     ++   LSI LL+S
Sbjct: 313 SSRKLGGLGYTTEDVGEVLAISGFSLLVFQLSLYPFVERILGPIPVAQIAAALSILLLSS 372

Query: 42  Y--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV----------------SL 83
           Y  IAMLSG   ++LINCAS+MKNV SVSI+TG+F+LQN AV                SL
Sbjct: 373 YPFIAMLSGLGLSILINCASIMKNVFSVSIVTGMFILQNNAVDQNQRGAANGISMTGMSL 432

Query: 84  TKTAGPAVGGAIFSWSQKRQDAGFLP 109
            K  GPA GGAI SW+Q+RQ+A FLP
Sbjct: 433 FKAVGPAGGGAILSWAQRRQNAAFLP 458

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7362779|emb|CAB83151.1| transporter-like protein [Arabidopsis thaliana]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/147 (44%), Positives = 90/147 (61%), Gaps = 39/147 (26%)

Query: 2   VSPRKYGGLSYSTENVGQVLAISS---------------------AKLKMLLVLSIPLLT 40
           VS R YGGLS+S+++VG+VLAIS                      A +++  VL IPLL+
Sbjct: 298 VSDRSYGGLSFSSQDVGEVLAISGLGLLVFQLLVYPPLEKSVGLLAVIRLSAVLLIPLLS 357

Query: 41  SY--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV----------------S 82
            Y  IA+LSG +  L+INCAS++KN LS+S++TGLF++ N+AV                S
Sbjct: 358 CYPYIALLSGVTLHLVINCASIIKNALSISLVTGLFIMLNKAVPQNQRGAANGISMTAMS 417

Query: 83  LTKTAGPAVGGAIFSWSQKRQDAGFLP 109
           + K+ GPA GG +FSW+QKRQDA FLP
Sbjct: 418 VFKSFGPAGGGVLFSWAQKRQDATFLP 444

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42572573|ref|NP_974382.1| zinc induced facilitator-like 2 protein [Arabidopsis thaliana] gi|42572575|ref|NP_974383.1| zinc induced facilitator-like 2 protein [Arabidopsis thaliana] gi|310947332|sp|Q3EAQ5.2|PTR36_ARATH RecName: Full=Probable peptide/nitrate transporter At3g43790; AltName: Full=Protein ZINC INDUCED FACILITATOR-LIKE 2 gi|332644306|gb|AEE77827.1| zinc induced facilitator-like 2 protein [Arabidopsis thaliana] gi|332644308|gb|AEE77829.1| zinc induced facilitator-like 2 protein [Arabidopsis thaliana]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/147 (44%), Positives = 90/147 (61%), Gaps = 39/147 (26%)

Query: 2   VSPRKYGGLSYSTENVGQVLAISS---------------------AKLKMLLVLSIPLLT 40
           VS R YGGLS+S+++VG+VLAIS                      A +++  VL IPLL+
Sbjct: 303 VSDRSYGGLSFSSQDVGEVLAISGLGLLVFQLLVYPPLEKSVGLLAVIRLSAVLLIPLLS 362

Query: 41  SY--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV----------------S 82
            Y  IA+LSG +  L+INCAS++KN LS+S++TGLF++ N+AV                S
Sbjct: 363 CYPYIALLSGVTLHLVINCASIIKNALSISLVTGLFIMLNKAVPQNQRGAANGISMTAMS 422

Query: 83  LTKTAGPAVGGAIFSWSQKRQDAGFLP 109
           + K+ GPA GG +FSW+QKRQDA FLP
Sbjct: 423 VFKSFGPAGGGVLFSWAQKRQDATFLP 449

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
TAIR|locus:2101109	484	ZIFL2 "AT3G43790" [Arabidopsis	0.730	0.173	0.5	5.5e-17
TAIR|locus:2173254	486	ZIF1 "zinc induced facilitator	0.660	0.156	0.521	1.4e-14
TAIR|locus:2177105	478	ZIFL1 "zinc induced facilitato	0.826	0.198	0.422	1.2e-12

TAIR|locus:2101109 ZIFL2 "AT3G43790" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 5.5e-17, P = 5.5e-17
 Identities = 51/102 (50%), Positives = 70/102 (68%)

Query:    26 AKLKMLLVLSIPLLTSY--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV-- 81
             A +++  VL IPLL+ Y  IA+LSG +  L+INCAS++KN LS+S++TGLF++ N+AV  
Sbjct:   348 AVIRLSAVLLIPLLSCYPYIALLSGVTLHLVINCASIIKNALSISLVTGLFIMLNKAVPQ 407

Query:    82 ---------SLT-----KTAGPAVGGAIFSWSQKRQDAGFLP 109
                      S+T     K+ GPA GG +FSW+QKRQDA FLP
Sbjct:   408 NQRGAANGISMTAMSVFKSFGPAGGGVLFSWAQKRQDATFLP 449

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009624 "response to nematode" evidence=IEP

TAIR|locus:2173254 ZIF1 "zinc induced facilitator 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 49/94 (52%), Positives = 60/94 (63%)

Query:    34 LSIPLLTSY--IAMLSGFSRALLINCASVMKNVLSVSIITGLFLLQNRAV---------- 81
             L IP+  SY  IA LSG S +L++NCAS++ NVLSVS ITGL +LQNRAV          
Sbjct:   363 LMIPIQMSYPFIAGLSGLSLSLMLNCASILINVLSVSAITGLLILQNRAVDQSQRGAANG 422

Query:    82 ------SLTKTAGPAVGGAIFSWSQKRQDAGFLP 109
                   SL KT GPA  G +FSWS++R +A FLP
Sbjct:   423 IAMTAMSLFKTVGPAGAGILFSWSERRLNAAFLP 456

GO:0005215 "transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IEA

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009624 "response to nematode" evidence=IEP

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0010043 "response to zinc ion" evidence=IEP

GO:0055069 "zinc ion homeostasis" evidence=IMP

TAIR|locus:2177105 ZIFL1 "zinc induced facilitator-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 49/116 (42%), Positives = 63/116 (54%)

Query:    11 SYSTENVGQVLAIS-SAKLKMLLVLSIPLLTSYIAMLSGFSRALLINCASVMKNVLSVSI 69
             SY+   +G ++    S  L M+++   PL    IA LSG +  + +  ASV K+VL  S 
Sbjct:   337 SYAERLLGPIIVTRISGSLAMVVLSCYPL----IAKLSGLALTVTVTSASVAKSVLGTSA 392

Query:    70 ITGLFLLQNRAV----------------SLTKTAGPAVGGAIFSWSQKRQDAGFLP 109
             ITGLF+LQN+AV                SL K  GPA  G IFSWS+KRQ A FLP
Sbjct:   393 ITGLFILQNKAVRQDQRGAANGIAMTAMSLFKAIGPAAAGIIFSWSEKRQGAAFLP 448


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.373    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      115       115   0.00091  102 3  11 22  0.44    30
                                                     29  0.45    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  500 (53 KB)
  Total size of DFA:  97 KB (2070 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.97u 0.17s 11.14t   Elapsed:  00:00:01
  Total cpu time:  10.97u 0.17s 11.14t   Elapsed:  00:00:01
  Start:  Mon May 20 17:20:27 2013   End:  Mon May 20 17:20:28 2013

GO:0005215 "transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0080167 "response to karrikin" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	115
KOG2615	451	consensus Permease of the major facilitator superf	99.72

>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=99.72  E-value=5.2e-18  Score=144.91  Aligned_cols=110  Identities=28%  Similarity=0.359  Sum_probs=98.0

Q ss_pred             CCCCCC--CCcccccccceeeEeeechhh------------h----HHHHHHHHHH--HHHhhhcchhhHHHHHHHHHHH
Q 046550            2 VSPRKY--GGLSYSTENVGQVLAISSAKL------------K----MLLVLSIPLL--TSYIAMLSGFSRALLINCASVM   61 (115)
Q Consensus         2 vS~r~~--GGL~~sS~dVG~vlaisG~~~------------R----~~~vlsiPlL--~~Ym~~Lsg~~l~~~l~~asil   61 (115)
                      .+++++  |||+|+|+|+|.+++.+|+.+            |    ..+++-++++  .||...+++.+...++|+.+.+
T Consensus       282 ~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l  361 (451)
T KOG2615|consen  282 NTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTL  361 (451)
T ss_pred             hhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHH
Confidence            456777  999999999999999999998            1    3445445544  6669999999999999999999


Q ss_pred             hHhhHHHhhhhhHhhhhhhh----------------hhhhhhcccccceeeeeeccCccccccCCC
Q 046550           62 KNVLSVSIITGLFLLQNRAV----------------SLTKTAGPAVGGAIFSWSQKRQDAGFLPVL  111 (115)
Q Consensus        62 K~~l~~~~~t~~~IL~nnav----------------slfkAigPA~~G~iFSw~qkr~~a~f~pg~  111 (115)
                      |++++.+..||.++|||++.                +++||+||+.+|++|+|.|++|.+.+.||.
T Consensus       362 ~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~  427 (451)
T KOG2615|consen  362 KSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGA  427 (451)
T ss_pred             HHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHH
Confidence            99999999999999999998                999999999999999999999999998874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00