Citrus Sinensis ID: 046572

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Protein Sequence
MSSSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDSFSGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKTVGDVLLAL
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHcHHHHEEEHHHHHccccHHHHHHHHccccccccEEEccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHcHEEEccccHHHHHHHccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MSSSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATkllgsnphdqllirtsDSFSGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKTVGDVLLAL
Flexible Loop (DISEMBL)
MSSSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDSFSGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKTVGDVLLAL
Low Complexity Region (SEG)
MSSSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDsfsglllfaigflifMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKTVGDVLLAL
Disordered region (IsUnstruct)
*****AFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDSFSGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKTVGDVLL**
Disordered Region (DISOPRED)
****GAF*VICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDSFSGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKTVGDVLLAL
Disordered Region (DISEMBL)
MSSSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDSFSGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKTVGDVLLAL
Disordered Region (DISPRO)
***SGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDSFSGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKTVGDVLLAL
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSSSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDSFSGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKTVGDVLLAL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
357446601	203	hypothetical protein MTR_2g013680 [Medic	1.0	0.640	0.792	3e-54
388507262	145	unknown [Medicago truncatula]	1.0	0.896	0.792	3e-54
255536809	145	conserved hypothetical protein [Ricinus	1.0	0.896	0.784	4e-53
224125514	146	predicted protein [Populus trichocarpa]	0.992	0.883	0.806	5e-53
224077104	143	predicted protein [Populus trichocarpa]	0.976	0.888	0.787	2e-51
225467229	150	PREDICTED: uncharacterized protein LOC10	1.0	0.866	0.776	2e-51
356555305	148	PREDICTED: uncharacterized protein LOC10	0.984	0.864	0.765	3e-50
449433836	139	PREDICTED: uncharacterized protein LOC10	0.923	0.863	0.791	3e-49
351720894	150	uncharacterized protein LOC100305662 pre	0.953	0.826	0.758	7e-49
147801862	269	hypothetical protein VITISV_027197 [Viti	0.976	0.472	0.724	2e-48

>gi|357446601|ref|XP_003593576.1| hypothetical protein MTR_2g013680 [Medicago truncatula] gi|355482624|gb|AES63827.1| hypothetical protein MTR_2g013680 [Medicago truncatula]

 Score =  216 bits (550), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 103/130 (79%), Positives = 117/130 (90%)

Query: 1   MSSSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSD 60
           MSSS AF VIC+LHS+IA+TSGALMMF MKE+YT  HG +TATKLLGS PHDQLLI+TSD
Sbjct: 1   MSSSSAFFVICILHSIIAITSGALMMFYMKEVYTFGHGVQTATKLLGSTPHDQLLIKTSD 60

Query: 61  SFSGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLR 120
           SFSGLLL AIGFL+FMVSFVKD++FQ FFAKGC +L +FMA WR+YFER+VE LAWDWLR
Sbjct: 61  SFSGLLLVAIGFLLFMVSFVKDRDFQHFFAKGCFLLHVFMALWRIYFERKVEDLAWDWLR 120

Query: 121 KTVGDVLLAL 130
           +TVGDVLLAL
Sbjct: 121 QTVGDVLLAL 130

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507262|gb|AFK41697.1| unknown [Medicago truncatula]

 Score =  216 bits (549), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 103/130 (79%), Positives = 117/130 (90%)

Query: 1   MSSSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSD 60
           MSSS AF VIC+LHS+IA+TSGALMMF MKE+YT  HG +TATKLLGS PHDQLLI+TSD
Sbjct: 1   MSSSSAFFVICILHSIIAITSGALMMFYMKEVYTFGHGVQTATKLLGSTPHDQLLIKTSD 60

Query: 61  SFSGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLR 120
           SFSGLLL AIGFL+FMVSFVKD++FQ FFAKGC +L +FMA WR+YFER+VE LAWDWLR
Sbjct: 61  SFSGLLLVAIGFLLFMVSFVKDRDFQHFFAKGCFLLHVFMALWRIYFERKVEDLAWDWLR 120

Query: 121 KTVGDVLLAL 130
           +TVGDVLLAL
Sbjct: 121 QTVGDVLLAL 130

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255536809|ref|XP_002509471.1| conserved hypothetical protein [Ricinus communis] gi|223549370|gb|EEF50858.1| conserved hypothetical protein [Ricinus communis]

 Score =  212 bits (540), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 102/130 (78%), Positives = 115/130 (88%)

Query: 1   MSSSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSD 60
           MSSS AF +IC+LHS+IALTSG+LMMF MKEIYT THG++ A KL+GS PHDQLLIRTSD
Sbjct: 1   MSSSSAFSIICILHSLIALTSGSLMMFHMKEIYTFTHGSDAALKLMGSTPHDQLLIRTSD 60

Query: 61  SFSGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLR 120
           SFSGLLLFAIGFLIFMVSFVKD++ Q+FFAKGC VL +FMA WRV FERRV+ LAWDWLR
Sbjct: 61  SFSGLLLFAIGFLIFMVSFVKDRDLQAFFAKGCTVLHVFMAIWRVTFERRVDVLAWDWLR 120

Query: 121 KTVGDVLLAL 130
           + VGD LLAL
Sbjct: 121 QIVGDFLLAL 130

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125514|ref|XP_002329824.1| predicted protein [Populus trichocarpa] gi|222870886|gb|EEF08017.1| predicted protein [Populus trichocarpa]

 Score =  211 bits (538), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 104/129 (80%), Positives = 113/129 (87%)

Query: 2   SSSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDS 61
           SSS AF  IC+LHS+IA+TSG LMMF+MKEIYT THG ETATKL+GS PHDQLLIRTSDS
Sbjct: 3   SSSSAFSTICILHSLIAITSGTLMMFQMKEIYTFTHGNETATKLMGSTPHDQLLIRTSDS 62

Query: 62  FSGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRK 121
           FSGLLLF IGFLIFMVSFVKD+EFQSFFAKGC VL +FM  WRV FERRVE LAW  LR+
Sbjct: 63  FSGLLLFDIGFLIFMVSFVKDREFQSFFAKGCAVLHVFMVLWRVNFERRVEVLAWVCLRQ 122

Query: 122 TVGDVLLAL 130
           TVGD+LLAL
Sbjct: 123 TVGDILLAL 131

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224077104|ref|XP_002305133.1| predicted protein [Populus trichocarpa] gi|118484061|gb|ABK93916.1| unknown [Populus trichocarpa] gi|222848097|gb|EEE85644.1| predicted protein [Populus trichocarpa]

 Score =  206 bits (525), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 100/127 (78%), Positives = 110/127 (86%)

Query: 4   SGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDSFS 63
           S AF VIC+LHS+IA+TSG LMMF MKEIYT THG ETAT L+GS P DQLLIRTSDSFS
Sbjct: 2   SSAFPVICILHSLIAITSGTLMMFHMKEIYTFTHGNETATILMGSTPQDQLLIRTSDSFS 61

Query: 64  GLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKTV 123
           GLLLFAIG+LIFMVSF+KD EFQ FFAKGC +L +FMA WRV FERRVE LAWDWLR+TV
Sbjct: 62  GLLLFAIGWLIFMVSFIKDGEFQYFFAKGCTLLHVFMAIWRVNFERRVEVLAWDWLRQTV 121

Query: 124 GDVLLAL 130
           GD+LL L
Sbjct: 122 GDILLGL 128

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225467229|ref|XP_002263054.1| PREDICTED: uncharacterized protein LOC100256771 [Vitis vinifera] gi|297735997|emb|CBI23971.3| unnamed protein product [Vitis vinifera]

 Score =  206 bits (524), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 101/130 (77%), Positives = 111/130 (85%)

Query: 1   MSSSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSD 60
           M SS  F VICLLHS+IALT G LMMF MKEIY   HG ETATKLLGS PHDQLLIRTSD
Sbjct: 6   MGSSSGFFVICLLHSIIALTCGGLMMFYMKEIYEFGHGPETATKLLGSTPHDQLLIRTSD 65

Query: 61  SFSGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLR 120
           SFSGLLLFAIGFL+FMV+FV+D++FQSFFAKGC+VL + MA WR YFERRVE LA DWLR
Sbjct: 66  SFSGLLLFAIGFLLFMVAFVRDRDFQSFFAKGCIVLHVSMALWRFYFERRVEDLALDWLR 125

Query: 121 KTVGDVLLAL 130
           + VGD+LLAL
Sbjct: 126 QIVGDILLAL 135

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555305|ref|XP_003545974.1| PREDICTED: uncharacterized protein LOC100527898 [Glycine max]

 Score =  202 bits (515), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 98/128 (76%), Positives = 112/128 (87%)

Query: 3   SSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDSF 62
           +S AF+VIC+LHSVIA+T GALMMF MKE+YT  HG + ATKLLGS PHDQLLI+TSDSF
Sbjct: 6   ASSAFMVICILHSVIAMTCGALMMFYMKEVYTFGHGVQAATKLLGSTPHDQLLIKTSDSF 65

Query: 63  SGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKT 122
           SGLLL AIGFL+FMVSFVKD++FQ FFAKGC +L +FMA WRVYFER+VE LA DWLR+T
Sbjct: 66  SGLLLVAIGFLLFMVSFVKDRDFQVFFAKGCTLLHLFMAMWRVYFERKVEDLALDWLRQT 125

Query: 123 VGDVLLAL 130
           VGD LLAL
Sbjct: 126 VGDFLLAL 133

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433836|ref|XP_004134703.1| PREDICTED: uncharacterized protein LOC101204514 [Cucumis sativus] gi|449479303|ref|XP_004155564.1| PREDICTED: uncharacterized LOC101204514 [Cucumis sativus]

 Score =  199 bits (506), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 95/120 (79%), Positives = 104/120 (86%)

Query: 2   SSSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDS 61
           SSS  F VICLLHSV+A+TSG LMMF MKEIYT+ HG E ATKL+GS PHDQLLIRTSDS
Sbjct: 3   SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIEIATKLMGSTPHDQLLIRTSDS 62

Query: 62  FSGLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRK 121
           FSGLLLFAIGFL+FMV+FVKD+EFQ FFAKGC VL + MA WR YFERRVE LAWDWLR+
Sbjct: 63  FSGLLLFAIGFLLFMVAFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWLRQ 122

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351720894|ref|NP_001238727.1| uncharacterized protein LOC100305662 precursor [Glycine max] gi|255626237|gb|ACU13463.1| unknown [Glycine max]

 Score =  198 bits (503), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 94/124 (75%), Positives = 108/124 (87%)

Query: 7   FVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDSFSGLL 66
           F+VIC+LHS+IA+T G LMMF MKE+YT  HG + ATKLLGS PHDQLLI+TSDSFSGLL
Sbjct: 12  FLVICILHSLIAVTCGGLMMFYMKEVYTFGHGVQAATKLLGSTPHDQLLIKTSDSFSGLL 71

Query: 67  LFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKTVGDV 126
           L AIGFL+FM SFVKD++FQ FFAKGC +L +FMA WRVYFER+VE LAWDWLR+TVGD 
Sbjct: 72  LVAIGFLLFMASFVKDRDFQVFFAKGCTLLHLFMAMWRVYFERKVEDLAWDWLRQTVGDF 131

Query: 127 LLAL 130
           LLAL
Sbjct: 132 LLAL 135

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147801862|emb|CAN74977.1| hypothetical protein VITISV_027197 [Vitis vinifera]

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 92/127 (72%), Positives = 106/127 (83%)

Query: 4   SGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDSFS 63
           S AF + C+LHSVIALT GALMMF   EI+   HG E A KL GS PHDQLLIRTSDSFS
Sbjct: 3   SAAFFLTCILHSVIALTCGALMMFYTNEIFVFGHGPEIARKLQGSTPHDQLLIRTSDSFS 62

Query: 64  GLLLFAIGFLIFMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKTV 123
           GLLLFAIGFL+FMV+FVKD+EFQSFFAKGCV L +FMA WR+YFER++E LAWDW ++ V
Sbjct: 63  GLLLFAIGFLLFMVAFVKDREFQSFFAKGCVTLHVFMALWRIYFERKLEDLAWDWPKQVV 122

Query: 124 GDVLLAL 130
           GD++LAL
Sbjct: 123 GDIVLAL 129

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
TAIR|locus:505006180	150	AT1G53035 "AT1G53035" [Arabido	0.953	0.826	0.508	3.1e-28
TAIR|locus:1006230226	144	AT3G15358 "AT3G15358" [Arabido	0.984	0.888	0.476	4e-26

TAIR|locus:505006180 AT1G53035 "AT1G53035" [Arabidopsis thaliana (taxid:3702)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 63/124 (50%), Positives = 82/124 (66%)

Query:     7 FVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDXXXXXX 66
             F VIC+LHS+IALTSG LMMF  ++      G+E A+KL GS PHD+LLI+ S       
Sbjct:    12 FRVICILHSIIALTSGTLMMFYTEKASIFGPGSEIASKLKGSTPHDELLIQISQSFSGLL 71

Query:    67 XXXXXXXXXMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKTVGDV 126
                      MVSFVKDKEF SFFA G V+L + MA WRV FE ++E LA++W ++ +GD+
Sbjct:    72 LFAIGLVLFMVSFVKDKEFHSFFAGGSVILYVLMAMWRVLFEWKIEDLAYEWPKQALGDI 131

Query:   127 LLAL 130
              LA+
Sbjct:   132 ALAI 135

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0007623 "circadian rhythm" evidence=RCA

TAIR|locus:1006230226 AT3G15358 "AT3G15358" [Arabidopsis thaliana (taxid:3702)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 61/128 (47%), Positives = 82/128 (64%)

Query:     3 SSGAFVVICLLHSVIALTSGALMMFKMKEIYTLTHGAETATKLLGSNPHDQLLIRTSDXX 62
             +S  F VIC+LHS+IALTSG LMMF  ++     HG++ A KL GS PHD+ LI+ S   
Sbjct:     2 NSYLFRVICILHSIIALTSGTLMMFYTEKASIFGHGSDIANKLKGSTPHDEQLIQISQSF 61

Query:    63 XXXXXXXXXXXXXMVSFVKDKEFQSFFAKGCVVLLIFMASWRVYFERRVEYLAWDWLRKT 122
                          MVSFVKD+EF SFFA G V+L + MA WRV FE ++E LA++  ++ 
Sbjct:    62 SGLLLFAIGLVLFMVSFVKDREFHSFFAAGSVILYMVMALWRVMFEWKIEDLAFECPKQA 121

Query:   123 VGDVLLAL 130
             +GD+ LA+
Sbjct:   122 LGDIALAV 129


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.137   0.418    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      130       115   0.00091  102 3  11 22  0.36    30
                                                     29  0.45    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  595 (63 KB)
  Total size of DFA:  129 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.88u 0.14s 9.02t   Elapsed:  00:00:00
  Total cpu time:  8.88u 0.14s 9.02t   Elapsed:  00:00:00
  Start:  Mon May 20 18:08:25 2013   End:  Mon May 20 18:08:25 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00