Citrus Sinensis ID: 046702

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------
Protein Sequence
MAATPLAVPQNLSSHHSQSHFSFANCVNLKQSHHRIHPRSTLVAPNGVSAPHKFSSFKKFSKPITVLGHNSKFLQMGSQETQNLSIKSMASDSGSTSATLSKRVLGIAHLVVSLGIILVVEKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVKTEMIDAEPMAKPSPFSPTEVWAWSGVFLISFVAALFYPTALGTSARTCLPFLLASTVLGYMVGSGLPSDVKKVFHPIICCALSADLAALAFGYLSKSGLDPVLGNYLTKVSSNPGA
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHccccEEEccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccEHHHHccccccccccccccEEccccccccccEEcccccccccccccccHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccEEcccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHcHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
maatplavpqnlsshhsqshfsfancvnlkqshhrihprstlvapngvsaphkfssfkkfskpitvlghnskflqmgsqetqNLSIKsmasdsgstsatLSKRVLGIAHLVVSLGIILVVEKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRwlplfyvpslvilplsvrdipaasglKICYIIFGGWFASLCVAGFTAIAVRKIVKTEmidaepmakpspfsptevWAWSGVFLISFVAALfyptalgtsartcLPFLLASTVLGYmvgsglpsdvkkvfHPIICCALSADLAALAFGYlsksgldpvlgnyltkvssnpga
Flexible Loop (DISEMBL)
MAATPLAVPQNLSSHHSQSHFSFANCVNLKQSHHRIHPRSTLVAPNGVSAPHKFSSFKKFSKPITVLGHNSKFLQMGSQETQNLSIKSMASDSGSTSATLSKRVLGIAHLVVSLGIILVVEKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVKTEMIDAEPMAKPSPFSPTEVWAWSGVFLISFVAALFYPTALGTSARTCLPFLLASTVLGYMVGSGLPSDVKKVFHPIICCALSADLAALAFGYLSKSGLDPVLGnyltkvssnpga
Low Complexity Region (SEG)
MAATPLAVPQNLsshhsqshfsfANCVNLKQSHHRIHPRSTLVAPNGVSAPHkfssfkkfskPITVLGHNSKFLQMGSQETQNLSIKSMASDSGSTSATLSKRVLGIAHLVVSLGIILVVEKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVKTEMIDAEPMAKPSPFSPTEVWAWSGVFLISFVAALFYPTALGTSARTCLPFLLASTVLGYMVGSGLPSDVKKVFHPIICCalsadlaalaFGYLSKSGLDPVLGNYLTKVSSNPGA
Disordered region (IsUnstruct)
*********************SFANCVNLK********************************PITVLG*********************************KRVLGIAHLVVSLGIILVVEKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVKTEM****************VWAWSGVFLISFVAALFYPTALGTSARTCLPFLLASTVLGYMVGSGLPSDVKKVFHPIICCALSADLAALAFGYLSKSGLDPVLGNYLT********
Disordered Region (DISOPRED)
***************HSQSHFSFANCVNLKQS***I*PR*TLVAPNGVSA***************************************************KRVLGIAHLVVSLGIILVVEKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRK*******************PTEVWAWSGVFLISFVAALFYPTALGTSARTCLPFLLASTVLGYMVGSGLPSDVKKVFHPIICCALSADLAALAFGYLSKSGLDPVLGNYL*********
Disordered Region (DISEMBL)
*******************HFSFANCVNLKQSHHRIHPRSTLVAPNGVSAPHKFSSFKKFSKPITVLGHNSKFLQMGSQETQNLSI*************LSKRVLGIAHLVVSLGIILVVEKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVKTEMIDAEPMAKPSPFSPTEVWAWSGVFLISFVAALFYPTALGTSARTCLPFLLASTVLGYMVGSGLPSDVKKVFHPIICCALSADLAALAFGYLSKSGLDPVLGNYLTKVSSNPGA
Disordered Region (DISPRO)
****************SQSHFSFANCVNLKQSHHRIHPRSTLVAPNGVSAPHKFSSFKKFSKPITVLGHNS*FLQ************************LSKRVLGIAHLVVSLGIILVVEKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVKTEMIDAEPMAKPSPFSPTEVWAWSGVFLISFVAALFYPTALGTSARTCLPFLLASTVLGYMVGSGLPSDVKKVFHPIICCALSADLAALAFGYLSKSGLDPVLGNYLTK*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAATPLAVPQNLSSHHSQSHFSFANCVNLKQSHHRIHPRSTLVAPNGVSAPHKFSSFKKFSKPITVLGHNSKFLQMGSQETQNLSIKSMASDSGSTSATLSKRVLGIAHLVVSLGIILVVEKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVKTEMIDAEPMAKPSPFSPTEVWAWSGVFLISFVAALFYPTALGTSARTCLPFLLASTVLGYMVGSGLPSDVKKVFHPIICCALSADLAALAFGYLSKSGLDPVLGNYLTKVSSNPGA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	347
255555937	534	conserved hypothetical protein [Ricinus	0.979	0.636	0.679	1e-133
356559047	501	PREDICTED: uncharacterized protein LOC10	0.864	0.598	0.682	1e-118
21593232	512	unknown [Arabidopsis thaliana]	0.827	0.560	0.712	1e-115
18398254	512	putative membrane protein [Arabidopsis t	0.827	0.560	0.712	1e-115
297851634	506	hypothetical protein ARALYDRAFT_473391 [	0.801	0.549	0.734	1e-113
296085918	450	unnamed protein product [Vitis vinifera]	0.775	0.597	0.785	1e-111
449453443	525	PREDICTED: uncharacterized protein LOC10	0.853	0.563	0.715	1e-110
225439243	434	PREDICTED: uncharacterized protein LOC10	0.743	0.594	0.806	1e-109
224074387	404	predicted protein [Populus trichocarpa]	0.657	0.564	0.877	1e-106
356495970	456	PREDICTED: uncharacterized protein LOC10	0.778	0.592	0.68	1e-104

>gi|255555937|ref|XP_002519004.1| conserved hypothetical protein [Ricinus communis] gi|223541991|gb|EEF43537.1| conserved hypothetical protein [Ricinus communis]

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 246/362 (67%), Positives = 287/362 (79%), Gaps = 22/362 (6%)

Query: 2   AATPLAVPQNLSSHHSQSHFSFANCVNLKQSHHRIHP----------RSTLVAPNGVSA- 50
           ++ P A PQ LS      HF     ++  + H  +HP          +++ V  NG+   
Sbjct: 3   SSAPSATPQYLS------HFLLTTNLHHSKQHLFLHPQPFVSTTPYSKASPVVFNGLQTI 56

Query: 51  --PHKFSSFKKFSKPITVLGHNSKFLQMGSQE---TQNLSIKSMASDSGSTSATLSKRVL 105
              +  S+  K S PI  L  NS+FLQM  Q+   ++  S KS++SD  +TS+TLS+ V 
Sbjct: 57  RYRYHSSNLHKSSVPIRFLEPNSRFLQMECQDNSSSRKFSTKSLSSDGSATSSTLSQSVF 116

Query: 106 GIAHLVVSLGIILVVEKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMS 165
           G+ HL+VSLGIIL ++KLLKKAFVAAAIKFPSALFGMFCIFS+LMILDSTIP AATSLM+
Sbjct: 117 GVLHLLVSLGIILAMDKLLKKAFVAAAIKFPSALFGMFCIFSVLMILDSTIPAAATSLMN 176

Query: 166 FFEPALLFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIA 225
           FFEPALLFIQRWLPLFYVPSLV+LPLSV+DIPAASG+KIC+II GGW ASLCVAGFTAI+
Sbjct: 177 FFEPALLFIQRWLPLFYVPSLVVLPLSVKDIPAASGIKICFIIAGGWLASLCVAGFTAIS 236

Query: 226 VRKIVKTEMIDAEPMAKPSPFSPTEVWAWSGVFLISFVAALFYPTALGTSARTCLPFLLA 285
           VRKIVKTEM DAEPMAKPSPFSP E+W W G+FL+SF AALFYPT+LGT+ARTCLPFLLA
Sbjct: 237 VRKIVKTEMTDAEPMAKPSPFSPIEIWTWCGIFLVSFAAALFYPTSLGTTARTCLPFLLA 296

Query: 286 STVLGYMVGSGLPSDVKKVFHPIICCALSADLAALAFGYLSKSGLDPVLGNYLTKVSSNP 345
           STV+GYMVGSGLPS VKK+FHPIICCALSADLAA AFGY+S+SGLDPVLG YLTK SSNP
Sbjct: 297 STVIGYMVGSGLPSAVKKIFHPIICCALSADLAAFAFGYVSRSGLDPVLGYYLTKASSNP 356

Query: 346 GA 347
           GA
Sbjct: 357 GA 358

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559047|ref|XP_003547813.1| PREDICTED: uncharacterized protein LOC100775540 [Glycine max]

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/315 (68%), Positives = 254/315 (80%), Gaps = 15/315 (4%)

Query: 33  HHRIHPRSTLVAPNGVSAPHKFSSFKKFSKPITVLGHNSKFLQMGSQETQNLSIKSMASD 92
              + P STL A     AP +  S   FS  +T           G+ +T++++ KS  +D
Sbjct: 26  RRTLFPNSTLNA-----APKRTVSSTTFSLTLT----------NGTCKTRHVAAKSSEAD 70

Query: 93  SGSTSATLSKRVLGIAHLVVSLGIILVVEKLLKKAFVAAAIKFPSALFGMFCIFSILMIL 152
           +G+TS +L++ V G+ HL VSLG+IL V+K LK+AFVAAAIKFPSALFGMFCIFS+L+IL
Sbjct: 71  TGNTSTSLTQTVFGVLHLAVSLGLILAVDKFLKQAFVAAAIKFPSALFGMFCIFSVLIIL 130

Query: 153 DSTIPDAATSLMSFFEPALLFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYIIFGGW 212
           DST+P AAT+ +SFFEPA +FIQRWLPLFYVPSLV+LPL+V+DIPAASG KI  I+ GGW
Sbjct: 131 DSTVPAAATAFVSFFEPAFMFIQRWLPLFYVPSLVVLPLAVKDIPAASGAKIGLILVGGW 190

Query: 213 FASLCVAGFTAIAVRKIVKTEMIDAEPMAKPSPFSPTEVWAWSGVFLISFVAALFYPTAL 272
            A+LCVAG+TAIAVRK VKTE++DAEPM KP+PFS  EVW W+ V LISFV+ALFYPTAL
Sbjct: 191 LATLCVAGYTAIAVRKAVKTELVDAEPMGKPAPFSSLEVWTWTAVLLISFVSALFYPTAL 250

Query: 273 GTSARTCLPFLLASTVLGYMVGSGLPSDVKKVFHPIICCALSADLAALAFGYLSKSGLDP 332
           GTSARTCLPFLLA+TVLGYMVGSGLPS+VKKVFHPIICCALSADL A AFGY SKSGL+P
Sbjct: 251 GTSARTCLPFLLAATVLGYMVGSGLPSNVKKVFHPIICCALSADLTAFAFGYFSKSGLEP 310

Query: 333 VLGNYLTKVSSNPGA 347
           VLG YLTK SSNPGA
Sbjct: 311 VLGYYLTKASSNPGA 325

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593232|gb|AAM65181.1| unknown [Arabidopsis thaliana]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/296 (71%), Positives = 247/296 (83%), Gaps = 9/296 (3%)

Query: 56  SFKKFSKPITVLGHNSKFLQMGSQETQN----LSIKSMASDSGSTSATLSKRVLGIAHLV 111
           +  KF KP        +FLQMGS +  N    LS+++M       ++T+S+ V+ I+HL+
Sbjct: 46  NLSKFRKP-----DGQRFLQMGSSKEMNFERKLSVQAMDGAGTGNTSTISRNVIAISHLL 100

Query: 112 VSLGIILVVEKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPAL 171
           VSLGIIL  +  LK+AFVAA+IKFPSALFGMFCIFS+LMI DS +P AA  LM+FFEPA 
Sbjct: 101 VSLGIILAADYFLKQAFVAASIKFPSALFGMFCIFSVLMIFDSVVPAAANGLMNFFEPAF 160

Query: 172 LFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVK 231
           LFIQRWLPLFYVPSLV+LPLSVRDIPAASG+KICYI+ GGW ASLCVAG+TAIAVRK+VK
Sbjct: 161 LFIQRWLPLFYVPSLVVLPLSVRDIPAASGVKICYIVAGGWLASLCVAGYTAIAVRKMVK 220

Query: 232 TEMIDAEPMAKPSPFSPTEVWAWSGVFLISFVAALFYPTALGTSARTCLPFLLASTVLGY 291
           TEM +AEPMAKPSPFS  E+W+WSG+F++SFV ALFYP +LGTSART LPFLL+STVLGY
Sbjct: 221 TEMTEAEPMAKPSPFSTLELWSWSGIFVVSFVGALFYPNSLGTSARTSLPFLLSSTVLGY 280

Query: 292 MVGSGLPSDVKKVFHPIICCALSADLAALAFGYLSKSGLDPVLGNYLTKVSSNPGA 347
           +VGSGLPS +KKVFHPIICCALSA LAALAFGY S SGLDPVLGNYLTKV+S+PGA
Sbjct: 281 IVGSGLPSSIKKVFHPIICCALSAVLAALAFGYASGSGLDPVLGNYLTKVASDPGA 336

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18398254|ref|NP_564388.1| putative membrane protein [Arabidopsis thaliana] gi|10801363|gb|AAG23435.1|AC084165_1 unknown protein [Arabidopsis thaliana] gi|12321470|gb|AAG50795.1|AC074309_12 unknown protein [Arabidopsis thaliana] gi|14532512|gb|AAK63984.1| At1g32080/F3C3_12 [Arabidopsis thaliana] gi|20855884|gb|AAM26636.1| At1g32080/F3C3_12 [Arabidopsis thaliana] gi|332193313|gb|AEE31434.1| putative membrane protein [Arabidopsis thaliana]

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/296 (71%), Positives = 247/296 (83%), Gaps = 9/296 (3%)

Query: 56  SFKKFSKPITVLGHNSKFLQMGSQETQN----LSIKSMASDSGSTSATLSKRVLGIAHLV 111
           +  KF KP        +FLQMGS +  N    LS+++M       ++T+S+ V+ I+HL+
Sbjct: 46  NLSKFRKP-----DGQRFLQMGSSKEMNFERKLSVQAMDGAGTGNTSTISRNVIAISHLL 100

Query: 112 VSLGIILVVEKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPAL 171
           VSLGIIL  +  LK+AFVAA+IKFPSALFGMFCIFS+LMI DS +P AA  LM+FFEPA 
Sbjct: 101 VSLGIILAADYFLKQAFVAASIKFPSALFGMFCIFSVLMIFDSVVPAAANGLMNFFEPAF 160

Query: 172 LFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVK 231
           LFIQRWLPLFYVPSLV+LPLSVRDIPAASG+KICYI+ GGW ASLCVAG+TAIAVRK+VK
Sbjct: 161 LFIQRWLPLFYVPSLVVLPLSVRDIPAASGVKICYIVAGGWLASLCVAGYTAIAVRKMVK 220

Query: 232 TEMIDAEPMAKPSPFSPTEVWAWSGVFLISFVAALFYPTALGTSARTCLPFLLASTVLGY 291
           TEM +AEPMAKPSPFS  E+W+WSG+F++SFV ALFYP +LGTSART LPFLL+STVLGY
Sbjct: 221 TEMTEAEPMAKPSPFSTLELWSWSGIFVVSFVGALFYPNSLGTSARTSLPFLLSSTVLGY 280

Query: 292 MVGSGLPSDVKKVFHPIICCALSADLAALAFGYLSKSGLDPVLGNYLTKVSSNPGA 347
           +VGSGLPS +KKVFHPIICCALSA LAALAFGY S SGLDPVLGNYLTKV+S+PGA
Sbjct: 281 IVGSGLPSSIKKVFHPIICCALSAVLAALAFGYASGSGLDPVLGNYLTKVASDPGA 336

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297851634|ref|XP_002893698.1| hypothetical protein ARALYDRAFT_473391 [Arabidopsis lyrata subsp. lyrata] gi|297339540|gb|EFH69957.1| hypothetical protein ARALYDRAFT_473391 [Arabidopsis lyrata subsp. lyrata]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/282 (73%), Positives = 241/282 (85%), Gaps = 4/282 (1%)

Query: 70  NSKFLQMGSQET----QNLSIKSMASDSGSTSATLSKRVLGIAHLVVSLGIILVVEKLLK 125
             +FLQMGS +     + LS+++M       ++T+S+ V  I+HL+VSLGIIL  +  LK
Sbjct: 49  KQRFLQMGSSKEMTFERKLSVQAMDGAGTGNTSTISRNVFAISHLLVSLGIILAADYFLK 108

Query: 126 KAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPS 185
           +AFVAA+IKFPSALFGMFCIFS+LMI DS +P AA  LM+FFEPA LFIQRWLPLFYVPS
Sbjct: 109 QAFVAASIKFPSALFGMFCIFSVLMIFDSVVPAAANGLMNFFEPAFLFIQRWLPLFYVPS 168

Query: 186 LVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVKTEMIDAEPMAKPSP 245
           LV+LPLSVRDIPAASG+KICYI+ GGW ASLCVAGFTAIAVRK+VKTEM +AEPMAKPSP
Sbjct: 169 LVVLPLSVRDIPAASGVKICYIVDGGWLASLCVAGFTAIAVRKMVKTEMTEAEPMAKPSP 228

Query: 246 FSPTEVWAWSGVFLISFVAALFYPTALGTSARTCLPFLLASTVLGYMVGSGLPSDVKKVF 305
           FS  E+ +WSG+F++SFV ALFYP +LGTSARTCLPFLL+STVLGY+VGSGLPS +KKVF
Sbjct: 229 FSTLELCSWSGIFVVSFVGALFYPNSLGTSARTCLPFLLSSTVLGYIVGSGLPSSIKKVF 288

Query: 306 HPIICCALSADLAALAFGYLSKSGLDPVLGNYLTKVSSNPGA 347
           HPIICCALSA LAALAFGY S SGLDPVLGNYLTKV+S+PGA
Sbjct: 289 HPIICCALSAVLAALAFGYASGSGLDPVLGNYLTKVASDPGA 330

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085918|emb|CBI31242.3| unnamed protein product [Vitis vinifera]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 212/270 (78%), Positives = 238/270 (88%), Gaps = 1/270 (0%)

Query: 78  SQETQNLSIKSMASDSGSTSATLSKRVLGIAHLVVSLGIILVVEKLLKKAFVAAAIKFPS 137
           S+  +   +KSM +DSGST   L + V G+ HLVVSLGIIL ++KLLKKAFVAAAIKFPS
Sbjct: 6   SRPLRRFQVKSMGTDSGSTPLGL-QSVFGVLHLVVSLGIILAMDKLLKKAFVAAAIKFPS 64

Query: 138 ALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPSLVILPLSVRDIP 197
           ALFGMFCIF+IL+ILDST+P AA SL++FF+PALLFIQRWLPLFYVPSLV+LPL+V+DIP
Sbjct: 65  ALFGMFCIFTILVILDSTVPAAAKSLINFFQPALLFIQRWLPLFYVPSLVVLPLAVKDIP 124

Query: 198 AASGLKICYIIFGGWFASLCVAGFTAIAVRKIVKTEMIDAEPMAKPSPFSPTEVWAWSGV 257
           AASGLKIC+II GGW ASL VAG+TAIAVRKIVKTEMI AEPM KPSPF+  EVW W+G+
Sbjct: 125 AASGLKICFIIVGGWLASLSVAGYTAIAVRKIVKTEMIPAEPMEKPSPFTSIEVWTWTGI 184

Query: 258 FLISFVAALFYPTALGTSARTCLPFLLASTVLGYMVGSGLPSDVKKVFHPIICCALSADL 317
           FLISFV+AL YPT LGT+ARTCLPFLLASTVLGY+VGSG PS VKKVFHPIICCALSADL
Sbjct: 185 FLISFVSALLYPTLLGTNARTCLPFLLASTVLGYVVGSGFPSTVKKVFHPIICCALSADL 244

Query: 318 AALAFGYLSKSGLDPVLGNYLTKVSSNPGA 347
           AALAFGY S+SGL PVLG YLTK SSNPGA
Sbjct: 245 AALAFGYFSQSGLYPVLGYYLTKASSNPGA 274

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453443|ref|XP_004144467.1| PREDICTED: uncharacterized protein LOC101212883 [Cucumis sativus] gi|449500107|ref|XP_004161006.1| PREDICTED: uncharacterized protein LOC101224322 [Cucumis sativus]

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 216/302 (71%), Positives = 253/302 (83%), Gaps = 6/302 (1%)

Query: 52  HKFSSFKKFSKPITVL-GHNSKFLQMGSQET----QNLSIKSMASDSG-STSATLSKRVL 105
           HK  S K+ +KP+      + +FL   S ++    +++ +KS ASD G STS++ S+ VL
Sbjct: 48  HKSHSPKESNKPLFRFPSSHPRFLPTDSSQSTPTYRDVLLKSAASDGGVSTSSSFSQTVL 107

Query: 106 GIAHLVVSLGIILVVEKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMS 165
           G+ HL+VSLGII+  +KLLK AFVAAAIKFPSALFGMFCIFS+L++LDST+P AAT +M+
Sbjct: 108 GVVHLIVSLGIIVATDKLLKGAFVAAAIKFPSALFGMFCIFSVLLVLDSTVPAAATGVMN 167

Query: 166 FFEPALLFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIA 225
           FFEPALLFIQRWLPLFYVPSLVILPLSV+DIPAASG+KIC+II  GW A+LCVAG+ AIA
Sbjct: 168 FFEPALLFIQRWLPLFYVPSLVILPLSVKDIPAASGIKICFIIVVGWLATLCVAGYMAIA 227

Query: 226 VRKIVKTEMIDAEPMAKPSPFSPTEVWAWSGVFLISFVAALFYPTALGTSARTCLPFLLA 285
           VR IVKTEM DAEPM KPS FS  E+W+W+G+FL SFVAALFYPTALGTSART LPFLLA
Sbjct: 228 VRNIVKTEMTDAEPMKKPSSFSSVEMWSWTGIFLASFVAALFYPTALGTSARTFLPFLLA 287

Query: 286 STVLGYMVGSGLPSDVKKVFHPIICCALSADLAALAFGYLSKSGLDPVLGNYLTKVSSNP 345
           STVLGY+VGS LP  VK VFHPIICCALSADLAALAFGYLS+SGLDP+L +YLTK SSNP
Sbjct: 288 STVLGYIVGSNLPGSVKTVFHPIICCALSADLAALAFGYLSRSGLDPILASYLTKTSSNP 347

Query: 346 GA 347
           GA
Sbjct: 348 GA 349

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439243|ref|XP_002277191.1| PREDICTED: uncharacterized protein LOC100250226 [Vitis vinifera]

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/259 (80%), Positives = 232/259 (89%), Gaps = 1/259 (0%)

Query: 89  MASDSGSTSATLSKRVLGIAHLVVSLGIILVVEKLLKKAFVAAAIKFPSALFGMFCIFSI 148
           M +DSGST   L + V G+ HLVVSLGIIL ++KLLKKAFVAAAIKFPSALFGMFCIF+I
Sbjct: 1   MGTDSGSTPLGL-QSVFGVLHLVVSLGIILAMDKLLKKAFVAAAIKFPSALFGMFCIFTI 59

Query: 149 LMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYII 208
           L+ILDST+P AA SL++FF+PALLFIQRWLPLFYVPSLV+LPL+V+DIPAASGLKIC+II
Sbjct: 60  LVILDSTVPAAAKSLINFFQPALLFIQRWLPLFYVPSLVVLPLAVKDIPAASGLKICFII 119

Query: 209 FGGWFASLCVAGFTAIAVRKIVKTEMIDAEPMAKPSPFSPTEVWAWSGVFLISFVAALFY 268
            GGW ASL VAG+TAIAVRKIVKTEMI AEPM KPSPF+  EVW W+G+FLISFV+AL Y
Sbjct: 120 VGGWLASLSVAGYTAIAVRKIVKTEMIPAEPMEKPSPFTSIEVWTWTGIFLISFVSALLY 179

Query: 269 PTALGTSARTCLPFLLASTVLGYMVGSGLPSDVKKVFHPIICCALSADLAALAFGYLSKS 328
           PT LGT+ARTCLPFLLASTVLGY+VGSG PS VKKVFHPIICCALSADLAALAFGY S+S
Sbjct: 180 PTLLGTNARTCLPFLLASTVLGYVVGSGFPSTVKKVFHPIICCALSADLAALAFGYFSQS 239

Query: 329 GLDPVLGNYLTKVSSNPGA 347
           GL PVLG YLTK SSNPGA
Sbjct: 240 GLYPVLGYYLTKASSNPGA 258

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074387|ref|XP_002304362.1| predicted protein [Populus trichocarpa] gi|222841794|gb|EEE79341.1| predicted protein [Populus trichocarpa]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/228 (87%), Positives = 216/228 (94%)

Query: 120 VEKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLP 179
           ++KLLKKAFVAAAIKFPSALFGMFCIFS+L+ILD TIP AATSLM+FF+PALLFIQRWLP
Sbjct: 1   MDKLLKKAFVAAAIKFPSALFGMFCIFSVLVILDITIPAAATSLMNFFQPALLFIQRWLP 60

Query: 180 LFYVPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVKTEMIDAEP 239
           LFYVPSLV+LPLSV+DIPAASG+KIC+I  GGW ASLCVAGFTAIAVRK+VKTEM DAEP
Sbjct: 61  LFYVPSLVVLPLSVKDIPAASGVKICFITAGGWLASLCVAGFTAIAVRKMVKTEMTDAEP 120

Query: 240 MAKPSPFSPTEVWAWSGVFLISFVAALFYPTALGTSARTCLPFLLASTVLGYMVGSGLPS 299
           MAKPSPFSP E+WAWSGVFL+SFV AL Y TALGT+ARTCLPFLLASTVLGYMVGSGLPS
Sbjct: 121 MAKPSPFSPLEIWAWSGVFLVSFVVALLYRTALGTAARTCLPFLLASTVLGYMVGSGLPS 180

Query: 300 DVKKVFHPIICCALSADLAALAFGYLSKSGLDPVLGNYLTKVSSNPGA 347
            VKKVFHPIICCALSADLAALAFG+LS+SGLDPVLG YLTKVSSNPGA
Sbjct: 181 GVKKVFHPIICCALSADLAALAFGFLSQSGLDPVLGYYLTKVSSNPGA 228

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356495970|ref|XP_003516843.1| PREDICTED: uncharacterized protein LOC100818144 [Glycine max]

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/275 (68%), Positives = 224/275 (81%), Gaps = 5/275 (1%)

Query: 78  SQETQNLSIKSMASDSGSTSA-----TLSKRVLGIAHLVVSLGIILVVEKLLKKAFVAAA 132
           S +++ L  + + S +G TS      TL  +V G+ H VVSLG+IL ++ LLKKAFVAA+
Sbjct: 6   SCKSEELCTELLESQTGDTSTGSVIQTLRLQVFGVLHWVVSLGLILAIDFLLKKAFVAAS 65

Query: 133 IKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPSLVILPLS 192
           I+FPSALFGMFCIFS+L+ILD  IP AA +LM FFEP ++FIQRWLPLFYVP LV+LPLS
Sbjct: 66  IEFPSALFGMFCIFSVLIILDCAIPSAAVALMKFFEPGIMFIQRWLPLFYVPYLVVLPLS 125

Query: 193 VRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVKTEMIDAEPMAKPSPFSPTEVW 252
           ++DIP +S +KIC+I+ GGW A+LCV G TAI VRK VKTE+IDAEPM KPSPFS  E+W
Sbjct: 126 LKDIPPSSAIKICFIVVGGWLATLCVTGMTAIGVRKAVKTELIDAEPMEKPSPFSSIELW 185

Query: 253 AWSGVFLISFVAALFYPTALGTSARTCLPFLLASTVLGYMVGSGLPSDVKKVFHPIICCA 312
           AW+G+FLISFVA+L YPTALGT ART LPFLLASTVLGYM+GSGLPS VKKV HPII CA
Sbjct: 186 AWTGIFLISFVASLVYPTALGTRARTYLPFLLASTVLGYMIGSGLPSSVKKVLHPIIFCA 245

Query: 313 LSADLAALAFGYLSKSGLDPVLGNYLTKVSSNPGA 347
            SA++ A+ FG+LSKSGLDPVLG YLT  SS+PGA
Sbjct: 246 ASAEVTAVVFGFLSKSGLDPVLGYYLTNSSSDPGA 280

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	347
TAIR|locus:2031745	512	LrgB [Arabidopsis thaliana (ta	0.792	0.537	0.715	3.1e-106
CGD|CAL0000300	646	orf19.3610 [Candida albicans (	0.164	0.088	0.327	0.00078
UNIPROTKB|Q59Y39	646	CaO19.11093 "Putative uncharac	0.164	0.088	0.327	0.00078

TAIR|locus:2031745 LrgB [Arabidopsis thaliana (taxid:3702)]

 Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
 Identities = 201/281 (71%), Positives = 237/281 (84%)

Query:    72 KFLQMGSQETQN----LSIKSM-ASDSGSTSATLSKRVLGIAHLVVSLGIILVVEKLLKK 126
             +FLQMGS +  N    LS+++M  + +G+TS T+S+ V+ I+HL+VSLGIIL  +  LK+
Sbjct:    57 RFLQMGSSKEMNFERKLSVQAMDGAGTGNTS-TISRNVIAISHLLVSLGIILAADYFLKQ 115

Query:   127 AFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPSL 186
             AFVAA+IKFPSALFGMFCIFS+LMI DS +P AA  LM+FFEPA LFIQRWLPLFYVPSL
Sbjct:   116 AFVAASIKFPSALFGMFCIFSVLMIFDSVVPAAANGLMNFFEPAFLFIQRWLPLFYVPSL 175

Query:   187 VILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVKTEMIDAEPMAKPSPF 246
             V+LPLSVRDIPAASG+KICYI+ GGW ASLCVAG+TAIAVRK+VKTEM +AEPMAKPSPF
Sbjct:   176 VVLPLSVRDIPAASGVKICYIVAGGWLASLCVAGYTAIAVRKMVKTEMTEAEPMAKPSPF 235

Query:   247 SPTEVWAWSGVFLISFVAALFYPTALGTSARTCLPFLLASTVLGYMVGSGLPSDVKKVFH 306
             S  E+W+WSG+F++SFV ALFYP +LGTSART LPFLL+STVLGY+VGSGLPS +KKVFH
Sbjct:   236 STLELWSWSGIFVVSFVGALFYPNSLGTSARTSLPFLLSSTVLGYIVGSGLPSSIKKVFH 295

Query:   307 PIICCXXXXXXXXXXFGYLSKSGLDPVLGNYLTKVSSNPGA 347
             PIICC          FGY S SGLDPVLGNYLTKV+S+PGA
Sbjct:   296 PIICCALSAVLAALAFGYASGSGLDPVLGNYLTKVASDPGA 336

GO:0005886 "plasma membrane" evidence=ISM

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009658 "chloroplast organization" evidence=IMP

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

CGD|CAL0000300 orf19.3610 [Candida albicans (taxid:5476)]

 Score = 83 (34.3 bits), Expect = 0.00078, Sum P(3) = 0.00078
 Identities = 19/58 (32%), Positives = 31/58 (53%)

Query:   161 TSLMSFFEPALLFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCV 218
             T+ +   +P++ F  +W+ +F++PS VILPLS   I     LKI  +   G    + V
Sbjct:   119 TNYLRLIKPSMNFTLKWINVFFIPSFVILPLS-DPITFIECLKIAGVFIVGMIILILV 175

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q59Y39 CaO19.11093 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 83 (34.3 bits), Expect = 0.00078, Sum P(3) = 0.00078
 Identities = 19/58 (32%), Positives = 31/58 (53%)

Query:   161 TSLMSFFEPALLFIQRWLPLFYVPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCV 218
             T+ +   +P++ F  +W+ +F++PS VILPLS   I     LKI  +   G    + V
Sbjct:   119 TNYLRLIKPSMNFTLKWINVFFIPSFVILPLS-DPITFIECLKIAGVFIVGMIILILV 175

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00003851001	SubName- Full=Chromosome chr8 scaffold_150, whole genome shotgun sequence; (518 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00037644001	SubName- Full=Chromosome chr9 scaffold_90, whole genome shotgun sequence; (395 aa)				•					0.472
	GSVIVG00024835001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (329 aa)				•					0.466
	GSVIVG00011932001	SubName- Full=Chromosome undetermined scaffold_2569, whole genome shotgun sequence; (393 aa)				•					0.465
	GSVIVG00023910001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (216 aa)				•					0.461
	GSVIVG00009459001	SubName- Full=Chromosome undetermined scaffold_235, whole genome shotgun sequence; (546 aa)				•			•		0.458
	GSVIVG00015908001	SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (324 aa)				•					0.452
	GSVIVG00036212001	SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (397 aa)				•					0.452
	GSVIVG00020753001	SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (448 aa)				•					0.452
	GSVIVG00017591001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (399 aa)				•					0.448
	GSVIVG00026129001	SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (273 aa)				•					0.442

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	347
PRK04125	141	murein hydrolase regulator LrgA; Provisional	99.89
PRK01658	122	holin-like protein; Validated	99.89
PRK01821	133	hypothetical protein; Provisional	99.89
COG1380	128	Putative effector of murein hydrolase LrgA [Genera	99.88
PF03788	96	LrgA: LrgA family; InterPro: IPR005538 This family	99.83

>PRK04125 murein hydrolase regulator LrgA; Provisional

Probab=99.89  E-value=3.3e-23  Score=181.54  Aligned_cols=114  Identities=14%  Similarity=0.190  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHH---HHHHHHHhhhCCccCChhHHHHHHHHHHHHhhhccCchhhhhhhhhhHHHHHHHHHcCCcccccc
Q 046702          109 HLVVSLGIILVV---EKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPS  185 (347)
Q Consensus       109 ~~~~sL~lLl~~---ge~I~~~f~aa~IpfPgsViGMlLLFalLl~~~~l~~~~a~~~~~~iep~A~fLLrwLpLFFVPS  185 (347)
                      +.+.+++++++|   ||++.+.++   +|+||||+||++||++|+...--        .+|+|++++|+++||++||||+
T Consensus         8 ~~l~ql~ill~~~~lGe~i~~ll~---lPiPGsViGMlLL~l~L~~~~vk--------~~~v~~~a~~LL~~m~LfFVPa   76 (141)
T PRK04125          8 SFLHQAFIFAAIMLISNIIASFLP---IPMPASVIGLVLLFVLLCTKVVK--------LEQVESLGTALTNNIGFLFVPS   76 (141)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcC---CCCcHHHHHHHHHHHHHHhCCcC--------HHHHHHHHHHHHHHHHHHHhhh
Confidence            444555555555   999999997   99999999999999999954221        7999999999999999999999


Q ss_pred             eeeccccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 046702          186 LVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVKTEM  234 (347)
Q Consensus       186 ~VgLpls~~~i~~~eglkI~ai~VvstliTL~vTa~v~~~l~r~~~te~  234 (347)
                      +||+|.|.+ ...+++++|++++++||+++|++||++++.+.|..+.+.
T Consensus        77 gVGim~~~~-ll~~~~~~Il~~ivvSTllvl~vtg~v~~~l~r~~~~~~  124 (141)
T PRK04125         77 GISVINSLG-VMSQYPVQIIGVIIVATILLLACTGLFSQFILGKTEKEK  124 (141)
T ss_pred             HhHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999955 999999999999999999999999999999887655433

>PRK01658 holin-like protein; Validated

Probab=99.89  E-value=4.2e-23  Score=176.75  Aligned_cols=112  Identities=18%  Similarity=0.376  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHHHH---HHHHHHHhhhCCccCChhHHHHHHHHHHHHh-hhccCchhhhhhhhhhHHHHHHHHHcCCcccc
Q 046702          108 AHLVVSLGIILVV---EKLLKKAFVAAAIKFPSALFGMFCIFSILMI-LDSTIPDAATSLMSFFEPALLFIQRWLPLFYV  183 (347)
Q Consensus       108 ~~~~~sL~lLl~~---ge~I~~~f~aa~IpfPgsViGMlLLFalLl~-~~~l~~~~a~~~~~~iep~A~fLLrwLpLFFV  183 (347)
                      .+.+.+++++++|   ||++.+.++   +|+|||++||++||++|.. +.+         .+|+|++++|+++||++|||
T Consensus         4 ~~~l~~l~il~~~~~~G~~i~~~l~---lpiPGsViGmlLL~~~L~~~~ik---------~~~v~~~a~~Ll~~m~llFV   71 (122)
T PRK01658          4 VKLLVQIALLYVFALVGTWIQEQLH---LPIPGSIIGIFLLLLLLSFKILK---------LKWIELGAETLLAELPLFFI   71 (122)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcC---CCCCHHHHHHHHHHHHHHhCCcC---------HHHHHHHHHHHHHHHHHHHH
Confidence            4556666666666   999999997   9999999999999999985 333         79999999999999999999


Q ss_pred             cceeeccccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 046702          184 PSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVKT  232 (347)
Q Consensus       184 PS~VgLpls~~~i~~~eglkI~ai~VvstliTL~vTa~v~~~l~r~~~t  232 (347)
                      |++||++.|.+ ...+|+++|++++++||+++|++||++++++.|+.+.
T Consensus        72 Pa~VGi~~~~~-ll~~~~~~il~~ivvsT~l~l~vtg~~~~~l~~~~~~  119 (122)
T PRK01658         72 PSAVGVMNYGD-FLSSKGISLFLVVVISTFVVMIVTGYLTQLLAKRKER  119 (122)
T ss_pred             HhhhHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            99999999955 9999999999999999999999999999998876544

>PRK01821 hypothetical protein; Provisional

Probab=99.89  E-value=6.4e-23  Score=178.13  Aligned_cols=113  Identities=19%  Similarity=0.254  Sum_probs=100.6

Q ss_pred             HHHHHHHHHHHHHH---HHHHHHHhhhCCccCChhHHHHHHHHHHHHhhhccCchhhhhhhhhhHHHHHHHHHcCCcccc
Q 046702          107 IAHLVVSLGIILVV---EKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYV  183 (347)
Q Consensus       107 ~~~~~~sL~lLl~~---ge~I~~~f~aa~IpfPgsViGMlLLFalLl~~~~l~~~~a~~~~~~iep~A~fLLrwLpLFFV  183 (347)
                      +.+.+.+++++++|   ||++.+.++   +|+||||+||++||++|....--        .+|+|++++|+++||++|||
T Consensus         8 ~~~~l~~l~ill~~~~~Ge~i~~~l~---lpiPGsViGmlLLf~~L~~~~vk--------~~~v~~~a~~LL~~m~LfFV   76 (133)
T PRK01821          8 IWQYLRAFVLIYACLYAGIFIASLLP---ITIPGSIIGMLILFVLLALQILP--------AKWVKPGCSLLIRYMALLFV   76 (133)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcC---CCCcHHHHHHHHHHHHHHhCCcC--------HHHHHHHHHHHHHHHHHHHh
Confidence            34667777777666   999999997   99999999999999999853221        78999999999999999999


Q ss_pred             cceeeccccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046702          184 PSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVK  231 (347)
Q Consensus       184 PS~VgLpls~~~i~~~eglkI~ai~VvstliTL~vTa~v~~~l~r~~~  231 (347)
                      |++||++.|.+ ...+++++|++++++||+++|++||+++++++|+.+
T Consensus        77 Pa~VGim~~~~-ll~~~~~~il~~ivvST~lvl~vtg~~~~~l~~~~~  123 (133)
T PRK01821         77 PIGVGVMQYYD-LLRAQFGPIVVSCIVSTLVVLLVVGWSSHYVHGERK  123 (133)
T ss_pred             hhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            99999999955 999999999999999999999999999999987643

>COG1380 Putative effector of murein hydrolase LrgA [General function prediction only]

Probab=99.88  E-value=1.2e-22  Score=175.42  Aligned_cols=114  Identities=22%  Similarity=0.356  Sum_probs=102.6

Q ss_pred             HHHHHHHHHHHHHH---HHHHHHHhhhCCccCChhHHHHHHHHHHHH-hhhccCchhhhhhhhhhHHHHHHHHHcCCccc
Q 046702          107 IAHLVVSLGIILVV---EKLLKKAFVAAAIKFPSALFGMFCIFSILM-ILDSTIPDAATSLMSFFEPALLFIQRWLPLFY  182 (347)
Q Consensus       107 ~~~~~~sL~lLl~~---ge~I~~~f~aa~IpfPgsViGMlLLFalLl-~~~~l~~~~a~~~~~~iep~A~fLLrwLpLFF  182 (347)
                      ..+...+++++++|   ||++++.++   +|+|||++||++||++|. ...+         .+|+|++|+|++|+|++||
T Consensus         4 ~~~~~~q~~ii~~~~~~G~~i~~~l~---lplPGsIiGmvLLfllL~~~iv~---------l~wv~~~a~~Ll~~m~llF   71 (128)
T COG1380           4 VMQILRQLAIILGFLFLGEWIASLLH---LPLPGSIIGMVLLFLLLALKIVK---------LEWVERGATFLLRNMALLF   71 (128)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC---CCCChhHHHHHHHHHHHHhCCcc---------HHHHHHHHHHHHHHHHHHH
Confidence            45666777777776   999999997   999999999999999999 4444         8999999999999999999


Q ss_pred             ccceeeccccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 046702          183 VPSLVILPLSVRDIPAASGLKICYIIFGGWFASLCVAGFTAIAVRKIVKTE  233 (347)
Q Consensus       183 VPS~VgLpls~~~i~~~eglkI~ai~VvstliTL~vTa~v~~~l~r~~~te  233 (347)
                      ||++||+|.|.+ ...+++++|++++++||+++|.+|||+++.+.|..+.+
T Consensus        72 VPa~VgVm~y~~-~l~~~~~~Il~~~iiST~lv~~vtg~~~~~l~~~~~~~  121 (128)
T COG1380          72 VPAGVGVMNYFD-LLAADGLPILVVIIISTLLVLLVTGWVVQLLIRWQSKR  121 (128)
T ss_pred             hcchHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999944 99999999999999999999999999999998775544

>PF03788 LrgA: LrgA family; InterPro: IPR005538 This family is represented by: YohJ, an inner membrane protein with four predicted transmembrane domains; the C terminus is located in the periplasm []

Probab=99.83  E-value=3.6e-21  Score=158.49  Aligned_cols=95  Identities=24%  Similarity=0.450  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHhhhCCccCChhHHHHHHHHHHHHhhhccCchhhhhhhhhhHHHHHHHHHcCCcccccceeeccccCCccc
Q 046702          118 LVVEKLLKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPSLVILPLSVRDIP  197 (347)
Q Consensus       118 l~~ge~I~~~f~aa~IpfPgsViGMlLLFalLl~~~~l~~~~a~~~~~~iep~A~fLLrwLpLFFVPS~VgLpls~~~i~  197 (347)
                      +.+||++++.++   +|+|||++||++||++|.. ... +      .+++|++++++++||++||||++||++.+.+ ..
T Consensus         2 ~~~G~~i~~~l~---lpiPgsviGmllL~~~L~~-~~v-k------~~~i~~~a~~Ll~~m~lfFvPa~VGi~~~~~-~l   69 (96)
T PF03788_consen    2 QLLGEWISRLLP---LPIPGSVIGMLLLFLLLMF-KIV-K------LEWIEPAANFLLKNMALFFVPAGVGIMEYFD-LL   69 (96)
T ss_pred             chHHHHHHHHcC---CCCChHHHHHHHHHHHHHc-CCc-c------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence            467999999997   9999999999999999992 221 1      5999999999999999999999999999954 99


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046702          198 AASGLKICYIIFGGWFASLCVAGFTAI  224 (347)
Q Consensus       198 ~~eglkI~ai~VvstliTL~vTa~v~~  224 (347)
                      .+|++++++++++||++++.+|||++|
T Consensus        70 ~~~~~~i~~~i~vsT~l~~~~tg~~~q   96 (96)
T PF03788_consen   70 AQEGLPILVVIVVSTLLVLAVTGWVVQ   96 (96)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            999999999999999999999999875

LrgA, a protein that has been hypothesised to export murein hydrolases []. In Staphylococcus aureus, lrg and cid operons encode homologous proteins that regulate extracellular murein hydrolase activity and penicillin tolerance [, ]. Since the proteins encoded by cidA and lrgA are so similar to the bacteriophage-encoded holin family of proteins, they are considered analogous []. The proteins in this entry are functionally uncharacterised.; GO: 0016021 integral to membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00