Citrus Sinensis ID: 046827

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
Protein Sequence
MAKHHPNFLLPLLFLITATVSATFPPPNNKTNTPPLSTIPQQDDRQLNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLDPFIFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGIQNILDYSVYGGSTPSPPSLFPPPPPPPHSRDSFVEEAEVAG
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccEEEEEEcccccccccccccccccccccccHHHHHcccccccccccccccEEEEEEcccccEEEccEEEccccccccccEEEEEEcccccccccccccccccccccccccccccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccccccccEEEcccccccccccccHEEEEEEcccccHHHHHHccccccccccccccEEEEEEcccccEEEccEEEEccccccccEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHcc
Coil and Loop (DISEMBL)
makhhpnflLPLLFLITAtvsatfpppnnktntpplstipqqddrQLNNIIDALvgtgdfnswENIITAadestsavvafpfsatffipsndfrfpldpfifpyhivpqrlsfsdllllkplsrlptllpkksilvtntsasnftlddslvfypdlyltsTIAVHGIQNIldysvyggstpsppslfppppppphsrdsfVEEAEVAG
Flexible Loop (DISEMBL)
MAKHHPNFLLPLLFLITATVSATFPPPNNKTNTPPLSTIPQQDDRQLNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLDPFIFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVtntsasnftlddSLVFYPDLYLTSTIAVHGIQNILDYSVYGGSTPSPPSLFPPPPPPPHSRDSFVEEAEVAG
Low Complexity Region (SEG)
MAKhhpnfllpllflITATVSAtfpppnnktntppLSTIPQQDDRQLNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLDPFIFPYHIVPQRlsfsdllllkplsrlptllpkksILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGIQNILDYSVYGGstpsppslfppppppphsRDSFVEEAEVAG
Disordered region (IsUnstruct)
******NFLLPLLFLITATVSAT***********************LNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLDPFIFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGIQNILDYSVYG*******************************
Disordered Region (DISOPRED)
*****PN*LLPLLFLITAT*****************************NIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLDPFIFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGIQNILDYS*****************************A****
Disordered Region (DISEMBL)
MAKHHPNFLLPLLFLITATVSATFPPPNNKTNTPPLSTIPQQDDRQLNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLDPFIFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGIQNILDYSVYGGST****************************
Disordered Region (DISPRO)
****HPNFLLPLLFLITATVSATFPPPNNKTNTPPLSTIPQQDDRQLNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLDPFIFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGIQNILDYSVYGGS*PSPPSLFPPP*P****************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAKHHPNFLLPLLFLITATVSATFPPPNNKTNTPPLSTIPQQDDRQLNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLDPFIFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGIQNILDYSVYGGSTPSPPSLFPPPPPPPHSRDSFVEEAEVAG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	208	2.2.26 [Sep-21-2011]
Q5Q0H2	248	Fasciclin-like arabinogal	no	no	0.427	0.358	0.404	5e-06
P0DH64	260	FAS1 domain-containing pr	N/A	no	0.615	0.492	0.283	1e-05

>sp|Q5Q0H2|FLA19_ARATH Fasciclin-like arabinogalactan protein 19 OS=Arabidopsis thaliana GN=FLA19 PE=2 SV=2

 Score = 51.2 bits (121), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 51/99 (51%), Gaps = 10/99 (10%)

Query: 83  SATFFIPSNDFRFPLD-----PF---IFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSI 134
           S T F P++   F LD     PF       H VP RLS S L  L   S LPTLLP   +
Sbjct: 68  SLTLFAPTDSMLFDLDMTHSLPFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRL 127

Query: 135 LVTNTSASNFT--LDDSLVFYPDLYLTSTIAVHGIQNIL 171
           L+T  S+SN +  LD   +  P L+    IAVHG+ ++L
Sbjct: 128 LLTKHSSSNDSIFLDGVQLLIPGLFDGQHIAVHGLADLL 166

May be a cell surface adhesion protein.
Arabidopsis thaliana (taxid: 3702)

>sp|P0DH64|Y4891_SELML FAS1 domain-containing protein SELMODRAFT_448915 OS=Selaginella moellendorffii GN=SELMODRAFT_448915 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 20/148 (13%)

Query: 50  IIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLDPFI-------- 101
           ++  ++G G          AA  + S     P  +T  IPSN+    +D  +        
Sbjct: 75  LVSNMIGQG-------FTVAAAVAQSLQTLIPIRSTLLIPSNNAIAGVDANLSQEDIINT 127

Query: 102 FPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTST 161
             YH++    SF  L      + LPT+L  + I VT+ S  NFTL++  + +PD+  ++ 
Sbjct: 128 LQYHVLTFPTSFEALSRNDVGAELPTMLQGEMITVTSNSPGNFTLNEVNITHPDVCSSTR 187

Query: 162 -IAVHGIQNILDYS----VYGGSTPSPP 184
            IA HGI  +L Y+       G   SPP
Sbjct: 188 FIACHGIDRVLAYNSSLVTAAGPEASPP 215

Selaginella moellendorffii (taxid: 88036)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
255578027	258	conserved hypothetical protein [Ricinus	0.687	0.554	0.608	2e-41
359483990	265	PREDICTED: uncharacterized protein LOC10	0.687	0.539	0.551	5e-37
224115238	396	predicted protein [Populus trichocarpa]	0.673	0.353	0.567	2e-36
297846038	235	hypothetical protein ARALYDRAFT_473311 [	0.644	0.570	0.480	7e-28
357442889	225	hypothetical protein MTR_1g091740 [Medic	0.697	0.644	0.477	9e-28
15221503	239	Fasciclin-like arabinogalactan family pr	0.870	0.757	0.394	1e-25
18417505	169	uncharacterized protein [Arabidopsis tha	0.649	0.798	0.378	6e-17
116831411	170	unknown [Arabidopsis thaliana]	0.649	0.794	0.378	6e-17
21593736	169	unknown [Arabidopsis thaliana]	0.649	0.798	0.378	7e-17
297798984	170	hypothetical protein ARALYDRAFT_491757 [	0.701	0.858	0.350	2e-16

>gi|255578027|ref|XP_002529884.1| conserved hypothetical protein [Ricinus communis] gi|223530611|gb|EEF32487.1| conserved hypothetical protein [Ricinus communis]

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/156 (60%), Positives = 111/156 (71%), Gaps = 13/156 (8%)

Query: 45  RQLNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPL------D 98
           +QLNNIIDAL+G GDFNSW NI++ AD +T      P SAT FIP++D   P+      D
Sbjct: 58  QQLNNIIDALIGAGDFNSWVNILSVADAAT-----LPLSATLFIPADDSPSPIATTITID 112

Query: 99  PFIFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYL 158
           PFIFPYHIVPQRLSFSDL      SRLPTLL  KSIL+TN S SNFTLDDSL+ +PDL+ 
Sbjct: 113 PFIFPYHIVPQRLSFSDLCQFNLSSRLPTLLSFKSILITNNSISNFTLDDSLLSHPDLFS 172

Query: 159 TSTIAVHGIQNILDYSVYGGSTPSP--PSLFPPPPP 192
           + TIAVHGI  +LDYSVYG + P P  P +   PPP
Sbjct: 173 SDTIAVHGIATLLDYSVYGDAYPKPSQPEVLARPPP 208

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483990|ref|XP_002271093.2| PREDICTED: uncharacterized protein LOC100259675 [Vitis vinifera]

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 86/156 (55%), Positives = 108/156 (69%), Gaps = 13/156 (8%)

Query: 41  QQDDRQLNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFP---- 96
           ++  +QLNNIIDAL+GTGDF  W N++ +AD ST      P +AT FIPS++        
Sbjct: 57  REQQQQLNNIIDALIGTGDFGGWANLLYSADPST-----LPITATLFIPSDNATAAAAAT 111

Query: 97  ---LDPFIFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFY 153
              L+P IFPYHIVPQRLSFSDL      SRLPTLLP  SIL+TN + SNFT+DDS + +
Sbjct: 112 TTTLNPLIFPYHIVPQRLSFSDLQRFTTHSRLPTLLPTMSILITNNTPSNFTIDDSPITH 171

Query: 154 PDLYLTSTIAVHGIQNILDYSVYGGST-PSPPSLFP 188
           PDLYL S ++VHG+ ++LDYS+YG  T P  PSL P
Sbjct: 172 PDLYLASAVSVHGVASVLDYSLYGNETFPLKPSLPP 207

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115238|ref|XP_002332195.1| predicted protein [Populus trichocarpa] gi|222875302|gb|EEF12433.1| predicted protein [Populus trichocarpa]

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/155 (56%), Positives = 105/155 (67%), Gaps = 15/155 (9%)

Query: 33  TPPLSTIPQQDD------RQLNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATF 86
           TPP +   QQDD       Q+ NIIDA++GTGDF +W N +  AD +T     FP SATF
Sbjct: 168 TPPSTFTRQQDDLKFVFQEQIYNIIDAILGTGDFKNWANALGMADSTT-----FPISATF 222

Query: 87  FIPSNDFRFPL----DPFIFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSAS 142
           FIPS++   P     DP IFPYHIVPQRLSF+DL   K  SRLPTLL  KSIL+TN SAS
Sbjct: 223 FIPSDNSLSPTTTSADPDIFPYHIVPQRLSFADLQQFKTFSRLPTLLFDKSILITNNSAS 282

Query: 143 NFTLDDSLVFYPDLYLTSTIAVHGIQNILDYSVYG 177
           NFTLD S + +PD+Y  + I VH I N+LD+SVYG
Sbjct: 283 NFTLDGSRLTHPDIYTNAAITVHCIDNLLDHSVYG 317

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297846038|ref|XP_002890900.1| hypothetical protein ARALYDRAFT_473311 [Arabidopsis lyrata subsp. lyrata] gi|297336742|gb|EFH67159.1| hypothetical protein ARALYDRAFT_473311 [Arabidopsis lyrata subsp. lyrata]

 Score =  129 bits (324), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 74/154 (48%), Positives = 97/154 (62%), Gaps = 20/154 (12%)

Query: 39  IPQQDDRQLNNIIDALVGTGDFNSWE-NIITAADESTSAVVAFPFSATFFIPSNDF---- 93
           +  QD +  + II+A++G GDF  W  + ++A D+     +  P SAT F+PS DF    
Sbjct: 28  LTSQDHQHADRIIEAMIGAGDFRDWAADFLSAVDDQ----LGIPLSATIFVPS-DFDSAD 82

Query: 94  ----RFPLDPFIFP------YHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASN 143
                   D   +P      YHIVPQRLSF+DL LLKPLSRLPTLLP  SI+VTN S S 
Sbjct: 83  VSSSSTTGDNNAYPRRLSVAYHIVPQRLSFTDLRLLKPLSRLPTLLPGNSIVVTNNSVSG 142

Query: 144 FTLDDSLVFYPDLYLTSTIAVHGIQNILDYSVYG 177
           +TLD  LV  PDL+L+S+IA+HG+ + LD+S YG
Sbjct: 143 YTLDGVLVSEPDLFLSSSIAIHGVASSLDFSRYG 176

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357442889|ref|XP_003591722.1| hypothetical protein MTR_1g091740 [Medicago truncatula] gi|358344553|ref|XP_003636353.1| hypothetical protein MTR_038s0016 [Medicago truncatula] gi|355480770|gb|AES61973.1| hypothetical protein MTR_1g091740 [Medicago truncatula] gi|355502288|gb|AES83491.1| hypothetical protein MTR_038s0016 [Medicago truncatula]

 Score =  129 bits (323), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 76/159 (47%), Positives = 102/159 (64%), Gaps = 14/159 (8%)

Query: 45  RQLNNIIDALVGTGD--FNSWENIITAADESTSAVVAFPFSATFFIPSNDF--RFPLDPF 100
           +++NNI+DAL+G+GD   N W +I++ +  S         S T FIP         L+PF
Sbjct: 48  QEMNNILDALIGSGDTSINKWVSILSISHPS--------LSLTLFIPQQPLPSSSTLNPF 99

Query: 101 IFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTS 160
            FPYHI+PQRL ++DLLLL   SR+PTLLP K+I VT+    NFTLDD L+  PDLY TS
Sbjct: 100 TFPYHIIPQRLVYADLLLLPRYSRIPTLLPGKTITVTDNFPGNFTLDDVLLTQPDLYNTS 159

Query: 161 TIAVHGIQNILDYSVYGGSTPSPPSLFPPPPPPPHSRDS 199
           ++AVHG+Q +LDYS +G ++  P S  PP  P   + DS
Sbjct: 160 SLAVHGVQRLLDYSTFGDASMMPNS--PPFMPVGETWDS 196

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15221503|ref|NP_174366.1| Fasciclin-like arabinogalactan family protein [Arabidopsis thaliana] gi|4926823|gb|AAD32933.1|AC004135_8 T17H7.8 [Arabidopsis thaliana] gi|45476557|gb|AAS65944.1| At1g30800 [Arabidopsis thaliana] gi|46402430|gb|AAS92317.1| At1g30800 [Arabidopsis thaliana] gi|332193155|gb|AEE31276.1| Fasciclin-like arabinogalactan family protein [Arabidopsis thaliana]

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 112/218 (51%), Gaps = 37/218 (16%)

Query: 1   MAKHHPNFLLPLLFLITATVSATFPPPNNKTNTPPLSTIPQQDDRQLNNIIDALVGTGDF 60
           MA     FLL L+  +T   SA  P           + +  QD +  + II+A++G GDF
Sbjct: 1   MATSSHLFLLFLITTVTFLTSAASP-----------AYLTSQDHQHADRIIEAMIGAGDF 49

Query: 61  NSWE-NIITAADESTSAVVAFPFSATFFIP----------------SNDFRFPLDPFIFP 103
             W  + ++A D+        P SAT FIP                 N+   P    +  
Sbjct: 50  RDWAADFLSAVDDQ----FGIPLSATIFIPSDFDSADISSSSSSTTGNNNANPRRLSV-A 104

Query: 104 YHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTSTIA 163
           YHIVPQRLSF+DL L KPLSRLPTLLP  +I+VTN S   + LD  LV  PDL+L+S+IA
Sbjct: 105 YHIVPQRLSFTDLRLFKPLSRLPTLLPGNTIVVTNNSVPGYALDGVLVSEPDLFLSSSIA 164

Query: 164 VHGIQNILDYSVYG----GSTPSPPSLFPPPPPPPHSR 197
           +HG+ + LD+S YG    G T    SL P P  P   R
Sbjct: 165 IHGVASSLDFSRYGDFGTGDTTLADSLRPWPFQPSSRR 202

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18417505|ref|NP_567838.1| uncharacterized protein [Arabidopsis thaliana] gi|4938474|emb|CAB43833.1| hypothetical protein [Arabidopsis thaliana] gi|7269898|emb|CAB80991.1| hypothetical protein [Arabidopsis thaliana] gi|89274165|gb|ABD65603.1| At4g29980 [Arabidopsis thaliana] gi|91806750|gb|ABE66102.1| unknown [Arabidopsis thaliana] gi|332660304|gb|AEE85704.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 5/140 (3%)

Query: 42  QDDRQLNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRF--PLDP 99
           + ++    IIDA+V +G F  W       ++  +  V    ++T F+P           P
Sbjct: 31  EQNQIATKIIDAMVSSGSFEDWSGAFLNNNDELNGPV---LTSTLFLPKTSVEGINATSP 87

Query: 100 FIFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLT 159
            +  YHIVPQ L FS + L+ P SR+PTLL   SI+VTN SAS FTLD  L+  PDL+++
Sbjct: 88  LVASYHIVPQWLDFSVISLMMPFSRIPTLLSGHSIVVTNNSASGFTLDGVLISEPDLFVS 147

Query: 160 STIAVHGIQNILDYSVYGGS 179
            TI +H +    ++S YGG 
Sbjct: 148 PTIVIHRMAFPFNFSRYGGG 167

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116831411|gb|ABK28658.1| unknown [Arabidopsis thaliana]

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 5/140 (3%)

Query: 42  QDDRQLNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRF--PLDP 99
           + ++    IIDA+V +G F  W       ++  +  V    ++T F+P           P
Sbjct: 31  EQNQIATKIIDAMVSSGSFEDWSGAFLNNNDELNGPV---LTSTLFLPKTSVEGINATSP 87

Query: 100 FIFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLT 159
            +  YHIVPQ L FS + L+ P SR+PTLL   SI+VTN SAS FTLD  L+  PDL+++
Sbjct: 88  LVASYHIVPQWLDFSVISLMMPFSRIPTLLSGHSIVVTNNSASGFTLDGVLISEPDLFVS 147

Query: 160 STIAVHGIQNILDYSVYGGS 179
            TI +H +    ++S YGG 
Sbjct: 148 PTIVIHRMAFPFNFSRYGGG 167

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593736|gb|AAM65703.1| unknown [Arabidopsis thaliana]

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 5/140 (3%)

Query: 42  QDDRQLNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRF--PLDP 99
           + ++    IIDA+V +G F  W       ++  +  V    ++T F+P           P
Sbjct: 31  EQNQIATKIIDAMVSSGSFEDWSGAXLNNNDELNGPV---LTSTLFLPKTSVEGINATSP 87

Query: 100 FIFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLT 159
            +  YHIVPQ L FS + L+ P SR+PTLL   SI+VTN SAS FTLD  L+  PDL+++
Sbjct: 88  LVASYHIVPQWLDFSVISLMMPFSRIPTLLSGHSIVVTNNSASGFTLDGVLISEPDLFVS 147

Query: 160 STIAVHGIQNILDYSVYGGS 179
            TI +H +    ++S YGG 
Sbjct: 148 PTIVIHRMAFPFNFSRYGGG 167

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798984|ref|XP_002867376.1| hypothetical protein ARALYDRAFT_491757 [Arabidopsis lyrata subsp. lyrata] gi|297313212|gb|EFH43635.1| hypothetical protein ARALYDRAFT_491757 [Arabidopsis lyrata subsp. lyrata]

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 5/151 (3%)

Query: 31  TNTPPLSTIPQQDDRQLNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPS 90
           T++  L  +  + ++    IIDA++ +G F  W       ++  +  V    ++T F+P 
Sbjct: 21  TSSTSLPFLTTEQNQIATKIIDAMISSGSFEDWSGAFLNNNDELNGPV---LTSTLFLPK 77

Query: 91  NDFRF--PLDPFIFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDD 148
                     P +  YHIVPQ L FS + L+ P SR+PTLL   SI+VTN SAS FTLD 
Sbjct: 78  TSVEGINATSPLVASYHIVPQWLDFSVISLMMPFSRIPTLLSGHSIVVTNNSASGFTLDG 137

Query: 149 SLVFYPDLYLTSTIAVHGIQNILDYSVYGGS 179
            L+  PDL+++ +I +H +    ++S YGG 
Sbjct: 138 VLISEPDLFVSPSIVIHRMAFPFNFSRYGGG 168

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
TAIR|locus:2196969	239	AT1G30800 "AT1G30800" [Arabido	0.649	0.564	0.335	4.2e-15
TAIR|locus:2126535	169	AT4G29980 "AT4G29980" [Arabido	0.668	0.822	0.301	5.6e-13
TAIR|locus:2123241	176	AT4G12950 "AT4G12950" [Arabido	0.605	0.715	0.335	1.5e-12

TAIR|locus:2196969 AT1G30800 "AT1G30800" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 52/155 (33%), Positives = 73/155 (47%)

Query:    39 IPQQDDRQLNNIIDALVGTGDFNSWE-NIITAADESTSAVVAFPFSATFFIPSN----DF 93
             +  QD +  + II+A++G GDF  W  + ++A D+        P SAT FIPS+    D 
Sbjct:    28 LTSQDHQHADRIIEAMIGAGDFRDWAADFLSAVDDQ----FGIPLSATIFIPSDFDSADI 83

Query:    94 RFP---------LDP--FIFPYHIVPQRXXXXXXXXXXXXXXXXXXXXXXXILVTNTSAS 142
                          +P      YHIVPQR                       I+VTN S  
Sbjct:    84 SSSSSSTTGNNNANPRRLSVAYHIVPQRLSFTDLRLFKPLSRLPTLLPGNTIVVTNNSVP 143

Query:   143 NFTLDDSLVFYPDLYLTSTIAVHGIQNILDYSVYG 177
              + LD  LV  PDL+L+S+IA+HG+ + LD+S YG
Sbjct:   144 GYALDGVLVSEPDLFLSSSIAIHGVASSLDFSRYG 178

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2126535 AT4G29980 "AT4G29980" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 44/146 (30%), Positives = 65/146 (44%)

Query:    36 LSTIPQQDDRQLNNIIDALVGTGDFNSWEN-IITAADESTSAVVAFPFSATFFIPSNDFR 94
             L  +  + ++    IIDA+V +G F  W    +   DE    V+    ++T F+P     
Sbjct:    25 LPFLTTEQNQIATKIIDAMVSSGSFEDWSGAFLNNNDELNGPVL----TSTLFLPKTSVE 80

Query:    95 F--PLDPFIFPYHIVPQRXXXXXXXXXXXXXXXXXXXXXXXILVTNTSASNFTLDDSLVF 152
                   P +  YHIVPQ                        I+VTN SAS FTLD  L+ 
Sbjct:    81 GINATSPLVASYHIVPQWLDFSVISLMMPFSRIPTLLSGHSIVVTNNSASGFTLDGVLIS 140

Query:   153 YPDLYLTSTIAVHGIQNILDYSVYGG 178
              PDL+++ TI +H +    ++S YGG
Sbjct:   141 EPDLFVSPTIVIHRMAFPFNFSRYGG 166

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2123241 AT4G12950 "AT4G12950" [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 44/131 (33%), Positives = 63/131 (48%)

Query:    49 NIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLDPF-IFPYHIV 107
             ++IDAL     F  W ++    ++   A V  P  +T FIP++      D   +  YHIV
Sbjct:    28 DVIDALAHA-PFEEWSSVFIETNDRIRAEV-IP--STLFIPNSSANGSDDRHKLASYHIV 83

Query:   108 PQRXXXXXXXXXXXXXXXXXXXXXXXILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGI 167
             PQR                       ILVTN SA++F++D  L+   D+Y+ S IA+H I
Sbjct:    84 PQRLEFADLLLKPSRSRLPTLLNGSSILVTNNSATSFSIDGVLIIELDIYVDSFIAIHRI 143

Query:   168 QNILDYSVYGG 178
                LDY+ YGG
Sbjct:   144 AYPLDYTTYGG 154


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      208       142   0.00091  102 3  11 22  0.42    31
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  549 (58 KB)
  Total size of DFA:  127 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.20u 0.14s 11.34t   Elapsed:  00:00:01
  Total cpu time:  11.20u 0.14s 11.34t   Elapsed:  00:00:01
  Start:  Fri May 10 01:31:36 2013   End:  Fri May 10 01:31:37 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0031225 "anchored to membrane" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	208
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	1e-05

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 17/99 (17%)

Query: 85  TFFIPSND----FRFPLDPF-------IFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKS 133
           T F P+++        L+         +  YH+VP RLS +D   L     LPTL   K 
Sbjct: 1   TVFAPTDEAFQKLPPDLNSLLADKLKNLLLYHVVPGRLSSAD---LLNGGTLPTLAGSK- 56

Query: 134 ILVTNTSASN-FTLDDSLVFYPDLYLTSTIAVHGIQNIL 171
           + +T +  S   T++ + +   D+  T+   VH I  +L
Sbjct: 57  LRITRSGGSGTVTVNGARIVEADIAATN-GVVHVIDRVL 94

Length = 97

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	208
COG2335	187	Secreted and surface protein containing fasciclin-	99.92
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.81
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.79
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	98.64
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	98.58

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.92  E-value=2.2e-25  Score=187.84  Aligned_cols=124  Identities=18%  Similarity=0.243  Sum_probs=110.0

Q ss_pred             chhhhhhhhHHHHHhcCCChHHHHHHHHHhcccccccccCCCCeEEEecCCcCCCCCC----------------cccccc
Q 046827           41 QQDDRQLNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLD----------------PFIFPY  104 (208)
Q Consensus        41 ~~~~~~~~~Ii~~L~~ag~F~tlv~~L~~a~~~~~~~L~~~~~~TIFAPtD~Af~~l~----------------~~lL~y  104 (208)
                      +.+...+.+|++.....++|++|+.+++++++..  +|++.|+||||||+|+||++++                .++|.|
T Consensus        41 ~~~~~~~~~iV~~a~~~~~f~tl~~a~~aa~Lv~--~L~~~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtY  118 (187)
T COG2335          41 AAVKGNRADIVESAANNPSFTTLVAALKAAGLVD--TLNETGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTY  118 (187)
T ss_pred             chhccchhHHHHHHccCcchHHHHHHHHhhhhHH--HhcCCCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEE
Confidence            3456678999999999999999999999999886  6889999999999999999973                389999


Q ss_pred             cccCCccChhhhcccCCCCccccccCCceEEEEEcCCCceEEccEEeeCCceeecCCeEEEEeCCccC
Q 046827          105 HIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGIQNILD  172 (208)
Q Consensus       105 HVVPg~ls~~dL~~l~~gs~l~T~l~g~~L~VT~~~~~~~~Vn~a~Vv~pDI~~~ngivIHgID~VL~  172 (208)
                      |||+|+++.+|+.+...   + ++++|..+.|...+ ++++||+++|+.+||.++|| +||.||+||.
T Consensus       119 HVv~Gk~~~~~l~~~~~---v-~t~~G~~~~i~~~~-~~~~Vn~a~v~~~di~a~Ng-vIhvID~Vl~  180 (187)
T COG2335         119 HVVEGKITAADLKSSGS---V-KTVQGADLKIKVTG-GGVYVNDATVTIADINASNG-VIHVIDKVLI  180 (187)
T ss_pred             EEEcCcccHHHhhcccc---c-eeecCceEEEEEcC-CcEEEeeeEEEeccEeccCc-EEEEEeeecc
Confidence            99999999999987433   4 34799999998876 56999999999999999999 6999999996

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.81  E-value=1e-20  Score=145.60  Aligned_cols=110  Identities=23%  Similarity=0.331  Sum_probs=89.0

Q ss_pred             CChHHHHHHHHHhcccccccc-cCCCCeEEEecCCcCCCCCC--------------cccccccccCCccChhhhcccCCC
Q 046827           58 GDFNSWENIITAADESTSAVV-AFPFSATFFIPSNDFRFPLD--------------PFIFPYHIVPQRLSFSDLLLLKPL  122 (208)
Q Consensus        58 g~F~tlv~~L~~a~~~~~~~L-~~~~~~TIFAPtD~Af~~l~--------------~~lL~yHVVPg~ls~~dL~~l~~g  122 (208)
                      .+|++|.++|+.+++..  .| ...+++|||||+|+||+++.              .++|+|||++|+++.++|...  .
T Consensus         1 ~~~s~f~~~l~~~~l~~--~l~~~~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~~--~   76 (128)
T PF02469_consen    1 PDLSTFSRLLEQAGLAD--LLNDSDGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRNG--K   76 (128)
T ss_dssp             -TTHHHHHHHHHTTCHH--HHGCSSSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHCH--H
T ss_pred             CCHHHHHHHHHHcCCHH--HHhcCCCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhccc--c
Confidence            37899999999998765  46 67799999999999997651              489999999999999998764  1


Q ss_pred             CccccccCCceEEEEEc-CCCceEEcc-EEeeCCceeecCCeEEEEeCCccC
Q 046827          123 SRLPTLLPKKSILVTNT-SASNFTLDD-SLVFYPDLYLTSTIAVHGIQNILD  172 (208)
Q Consensus       123 s~l~T~l~g~~L~VT~~-~~~~~~Vn~-a~Vv~pDI~~~ngivIHgID~VL~  172 (208)
                      ..+.|++.|..+.|+.. +.+.++||+ ++|+..|+.++|| +||.||+||.
T Consensus        77 ~~~~t~~~g~~~~v~~~~~~~~~~v~~~a~i~~~~~~~~nG-~ih~id~vL~  127 (128)
T PF02469_consen   77 QTLETLLNGQPLRVSSSPSNGTIYVNGKARIVKSDIEASNG-VIHIIDDVLI  127 (128)
T ss_dssp             EEEEBSSTTCEEEEEEEGGTTEEEECCEEEESEEEEEESSE-EEEEESS-TS
T ss_pred             ccceeccCCCEEEEEEEecCCceEecCceEEEeCCEEeCCE-EEEEECceEC
Confidence            35777789999999876 447899999 9999999999999 5999999986

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.79  E-value=4.2e-20  Score=137.34  Aligned_cols=83  Identities=33%  Similarity=0.450  Sum_probs=72.5

Q ss_pred             EEEecCCcCCCCCC-------------cccccccccCCccChhhhcccCCCCccccccCCceEEEEEcCC-CceEEccEE
Q 046827           85 TFFIPSNDFRFPLD-------------PFIFPYHIVPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSA-SNFTLDDSL  150 (208)
Q Consensus        85 TIFAPtD~Af~~l~-------------~~lL~yHVVPg~ls~~dL~~l~~gs~l~T~l~g~~L~VT~~~~-~~~~Vn~a~  150 (208)
                      |||||+|+||+++.             .++|+|||+|++++.++|..   +..++| +.|..|.|+..+. +.+++|+++
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~---~~~~~T-l~g~~l~v~~~~~~~~i~in~~~   76 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLN---GGTLPT-LAGSKLRVTRSGDSGTVTVNGAR   76 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhcc---CCcccc-CCCCEEEEEEeCCCCeEEEcceE
Confidence            89999999999862             38999999999999999975   456766 4688999988764 679999999


Q ss_pred             eeCCceeecCCeEEEEeCCccC
Q 046827          151 VFYPDLYLTSTIAVHGIQNILD  172 (208)
Q Consensus       151 Vv~pDI~~~ngivIHgID~VL~  172 (208)
                      |+.+|+.++|| +||+||+||.
T Consensus        77 v~~~di~~~nG-vih~Id~vL~   97 (99)
T smart00554       77 IVEADIAATNG-VVHVIDRVLL   97 (99)
T ss_pred             EEECCEecCCe-EEEEECceeC
Confidence            99999999999 6999999985

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=98.64  E-value=4.8e-08  Score=96.32  Aligned_cols=120  Identities=15%  Similarity=0.110  Sum_probs=87.9

Q ss_pred             hhHHHHHhcCCChHHHHHHHHHhcccccccccCCCCeEEEecCCcCCCCCC------------cccccccccCCccChhh
Q 046827           48 NNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLD------------PFIFPYHIVPQRLSFSD  115 (208)
Q Consensus        48 ~~Ii~~L~~ag~F~tlv~~L~~a~~~~~~~L~~~~~~TIFAPtD~Af~~l~------------~~lL~yHVVPg~ls~~d  115 (208)
                      .++.+.|++.+.++.+.++++.++..+  ++..++++|+|+|+|+||.+..            ..++.||++++.+. =+
T Consensus       508 ~~l~~~l~~d~r~s~~~~~le~~~l~e--~l~~~~~~t~fvPt~ka~~~~~~~~~~~~~~~~l~~~l~yH~v~~~~~-ls  584 (682)
T KOG1437|consen  508 VSLMEDLKTDGRISGTVQGLEGVLLPE--ELTPEGNYTLFVPTNKAWQKSTKDEKSLFHKKALQDFLKYHLVPGQSR-LS  584 (682)
T ss_pred             ccHHHHHhhccchhhhHHhhhhcCChh--hhccCCceEEEeecccccccCCcchhhcchHHHHHHHHHhccccceee-ee
Confidence            567788999999999999999998876  4567799999999999998641            27899999999875 11


Q ss_pred             hcccCCCCc--cccccCCceEEEEEcCCCceEEccEEeeCCceeecCCeEEEEeCCccCC
Q 046827          116 LLLLKPLSR--LPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGIQNILDY  173 (208)
Q Consensus       116 L~~l~~gs~--l~T~l~g~~L~VT~~~~~~~~Vn~a~Vv~pDI~~~ngivIHgID~VL~~  173 (208)
                      +...+- ..  +.-.+.|..+.+..-. ....+|-.+++..||+..|| ++|.||.|+.+
T Consensus       585 ~~~~~~-v~~~~k~s~~~~~~~~~~~~-~~~~vn~e~~~~~~i~~~n~-~~h~i~~vl~p  641 (682)
T KOG1437|consen  585 LGSSPY-VMIQVKLSLRGDHLFFSLVN-PRGDVNKERLVGIDIMGTNG-VVHVIDLVLKP  641 (682)
T ss_pred             cccccc-eeeeeeEEEecccEEeeeec-cccceeeeeeeccceeeecc-eeEEEEEEccc
Confidence            111110 00  1222344444444333 34678999999999999999 69999999964

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=98.58  E-value=1.1e-07  Score=93.91  Aligned_cols=120  Identities=22%  Similarity=0.299  Sum_probs=88.2

Q ss_pred             hhhHHHHHhcCCChHHHHHHHHHhcccccccccCCCCeEEEecCCcCCCCCC--------cccccccccCCccChhhhcc
Q 046827           47 LNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLD--------PFIFPYHIVPQRLSFSDLLL  118 (208)
Q Consensus        47 ~~~Ii~~L~~ag~F~tlv~~L~~a~~~~~~~L~~~~~~TIFAPtD~Af~~l~--------~~lL~yHVVPg~ls~~dL~~  118 (208)
                      .+++.+.+++. +=+++++++...++..  .|..++..|+|+|+|++|.++.        ..+|.||++|-++..+++..
T Consensus       373 ~~~l~~La~e~-~~st~~rlv~elgll~--~L~~n~e~t~~lp~n~~fd~~~~~~~r~l~~qIL~~HII~~~~~~~~~y~  449 (682)
T KOG1437|consen  373 LKNLMSLARED-EISTSMRLVAELGLLT--ALAPNDEATLLLPTNNLFDDLTPLESRRLAEQILYNHIIPEYLTSSSMYN  449 (682)
T ss_pred             HHHHHHHHhcc-cccHHHHHHHhccceE--EEcCCCceEEeeehhhhccCCChhhhHHHHHHHHHHhCcchhhhhhhhhc
Confidence            46677777754 5588899999988875  3655566999999999999874        37999999999999998765


Q ss_pred             cCCCCccccccCCceEEEE--EcC----CCceEEcc-EEeeCCceeecCCeEEEEeCCccCC
Q 046827          119 LKPLSRLPTLLPKKSILVT--NTS----ASNFTLDD-SLVFYPDLYLTSTIAVHGIQNILDY  173 (208)
Q Consensus       119 l~~gs~l~T~l~g~~L~VT--~~~----~~~~~Vn~-a~Vv~pDI~~~ngivIHgID~VL~~  173 (208)
                      ..  +.++| +.|..+.+-  ...    ...+.++| +.|+..|+...|| +||.||+||.+
T Consensus       450 ~~--~~v~t-~g~~~l~~fv~r~~~s~~~t~i~~~~~~~Ii~aDi~~~nG-vvH~id~vl~p  507 (682)
T KOG1437|consen  450 GQ--TTVRT-LGKNKLLYFVYRHSVSANVTDILIGNEACIIEADISVKNG-VVHIIDRVLDP  507 (682)
T ss_pred             cc--ceeec-cCCeEEEEEEecccccccceeeeccceeeEEecccceecC-ceEEeeEEcCc
Confidence            32  24555 455544331  111    12345555 4799999999999 69999999976

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	208
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 5e-05
 Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 47/196 (23%)

Query: 10  LPLLFLITATVSATFPPPNNKTNTPPLSTIPQQDDRQLNNIIDALVGTGDFNSWENIITA 69
             LL           P     TN  P             +II   +      +W+N    
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTN--PR----------RLSIIAESI-RDGLATWDNWKHV 350

Query: 70  ADESTSAVVAFPFSATFFIPSNDFR--FPLDPFIFPY--HIVPQRLSFSDLLLLKPLSRL 125
             +  + ++    +    +   ++R  F     +FP   HI    LS   L+    +   
Sbjct: 351 NCDKLTTIIESSLNV---LEPAEYRKMF-DRLSVFPPSAHIPTILLS---LIWFDVIKSD 403

Query: 126 P----TLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTSTI------AVHGIQNILD-YS 174
                  L K S++            +S +  P +YL   +      A+H  ++I+D Y+
Sbjct: 404 VMVVVNKLHKYSLVEKQP-------KESTISIPSIYLELKVKLENEYALH--RSIVDHYN 454

Query: 175 V---YGGSTPSPPSLF 187
           +   +      PP L 
Sbjct: 455 IPKTFDSDDLIPPYLD 470

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	208
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.94
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.93
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.91
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.79
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.77

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.94  E-value=1.7e-27  Score=186.93  Aligned_cols=117  Identities=26%  Similarity=0.319  Sum_probs=102.5

Q ss_pred             hhhHHHHHhcCCChHHHHHHHHHhcccccccccCCCCeEEEecCCcCCCCCC--------------cccccccccCCccC
Q 046827           47 LNNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLD--------------PFIFPYHIVPQRLS  112 (208)
Q Consensus        47 ~~~Ii~~L~~ag~F~tlv~~L~~a~~~~~~~L~~~~~~TIFAPtD~Af~~l~--------------~~lL~yHVVPg~ls  112 (208)
                      |.+|++.|++.++|++|+++++++++.+  .|++.+++|||||+|+||+++.              .++|+|||+|+++.
T Consensus         1 ~~ti~~~l~~~~~fs~~~~~l~~agl~~--~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~   78 (132)
T 2vxp_A            1 MGTVMDVLKGDNRFSMLVAAIQSAGLTE--TLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILV   78 (132)
T ss_dssp             CCCHHHHHTTSTTCHHHHHHHHHHTCHH--HHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCC
T ss_pred             CccHHHHHHcCCCHHHHHHHHHHcCcHH--HHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceee
Confidence            5689999999999999999999999875  5778899999999999998863              27899999999998


Q ss_pred             hhhhcccCCCCccccccCCceEEEEEcCCCceEEccEEeeCCceeecCCeEEEEeCCcc
Q 046827          113 FSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGIQNIL  171 (208)
Q Consensus       113 ~~dL~~l~~gs~l~T~l~g~~L~VT~~~~~~~~Vn~a~Vv~pDI~~~ngivIHgID~VL  171 (208)
                      .++|..   +..++| +.|+.|.|+.++ +.++|||++|+.+||.++|| |||+||+||
T Consensus        79 ~~~l~~---~~~~~t-l~G~~l~v~~~~-~~v~vn~a~v~~~di~a~NG-vIHvID~VL  131 (132)
T 2vxp_A           79 SGGIGA---LVRLKS-LQGDKLEVSLKN-NVVSVNKEPVAEPDIMATNG-VVHVITNVL  131 (132)
T ss_dssp             STTCSS---CEEEEB-TTSSEEEEEEET-TEEEESSCBEEEEEEEETTE-EEEEESSCC
T ss_pred             hhhccC---CceEec-CCCCEEEEEEeC-CEEEEeccEEEEcceecCCE-EEEEECcEe
Confidence            888753   445655 688899998876 67999999999999999999 699999998

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.93  E-value=3.2e-27  Score=186.46  Aligned_cols=116  Identities=22%  Similarity=0.267  Sum_probs=102.3

Q ss_pred             hhHHHHHhcCCChHHHHHHHHHhcccccccccCCCCeEEEecCCcCCCCCC----------------cccccccccCCcc
Q 046827           48 NNIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLD----------------PFIFPYHIVPQRL  111 (208)
Q Consensus        48 ~~Ii~~L~~ag~F~tlv~~L~~a~~~~~~~L~~~~~~TIFAPtD~Af~~l~----------------~~lL~yHVVPg~l  111 (208)
                      ++|+++|++.++|++|+++|+.+++..  .|++.+++|||||+|+||+++.                .++|+||||||++
T Consensus         3 ~~i~~~l~~~~~~s~f~~~l~~agl~~--~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~   80 (137)
T 1w7d_A            3 GDIVETATGAGSFTTLLTAAEAAGLVD--TLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEV   80 (137)
T ss_dssp             STTGGGGGSCSSSTTTTHHHHHTTTHH--HHTSSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCC
T ss_pred             CCHHHHHHhCCCHHHHHHHHHHcCCHH--HHcCCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEE
Confidence            578999999999999999999999875  5778899999999999999862                2689999999999


Q ss_pred             ChhhhcccCCCCccccccCCceEEEEEcCCCceEEccEEeeCCceeecCCeEEEEeCCccC
Q 046827          112 SFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGIQNILD  172 (208)
Q Consensus       112 s~~dL~~l~~gs~l~T~l~g~~L~VT~~~~~~~~Vn~a~Vv~pDI~~~ngivIHgID~VL~  172 (208)
                      ..+||..   +..+.| +.|+.|.|+..+ + ++|||++|+.+||.++|| |||+||+||.
T Consensus        81 ~~~~l~~---~~~~~t-l~G~~l~v~~~~-g-v~vn~a~v~~~di~~~NG-vIHvID~VL~  134 (137)
T 1w7d_A           81 MSSDLTE---GMTAET-VEGGALTVTLEG-G-PKVNGVSISQPDVDASNG-VIHVIDGVLM  134 (137)
T ss_dssp             CTTTSCS---SEEEEC-TTSCEEEEECTT-S-CEETTEECSBCCCBCSSS-EEEBCSSCCS
T ss_pred             cHHHhcC---CCeeec-cCCceEEEEecC-C-EEEeCcEEEECCeecCCe-EEEEECeeeC
Confidence            9999865   445655 688999999875 5 999999999999999999 5999999996

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.91  E-value=2e-25  Score=181.81  Aligned_cols=116  Identities=17%  Similarity=0.194  Sum_probs=102.2

Q ss_pred             hhhhHHHHHhcCCChHHHHHHHH-----HhcccccccccCCCCeEEEecCCcCCCCCC--------------cccccccc
Q 046827           46 QLNNIIDALVGTGDFNSWENIIT-----AADESTSAVVAFPFSATFFIPSNDFRFPLD--------------PFIFPYHI  106 (208)
Q Consensus        46 ~~~~Ii~~L~~ag~F~tlv~~L~-----~a~~~~~~~L~~~~~~TIFAPtD~Af~~l~--------------~~lL~yHV  106 (208)
                      ...+|+++|.+.++|++|+++|+     .+++.+  .|++.+ +|||||+|+||+++.              .++|+|||
T Consensus        26 ~~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~--~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHv  102 (163)
T 1nyo_A           26 SQDPVAVAASNNPELTTLTAALSGQLNPQVNLVD--TLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHV  102 (163)
T ss_dssp             HHSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHH--HHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTE
T ss_pred             CCcCHHHHHHhCCCHHHHHHHHHhccccccCHHH--HhCCCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhce
Confidence            56899999999999999999999     888765  577777 999999999998762              26999999


Q ss_pred             cCCccChhhhcccCCCCccccccCCceEEEEEcCCCceEEccEEeeCCceeecCCeEEEEeCCccC
Q 046827          107 VPQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGIQNILD  172 (208)
Q Consensus       107 VPg~ls~~dL~~l~~gs~l~T~l~g~~L~VT~~~~~~~~Vn~a~Vv~pDI~~~ngivIHgID~VL~  172 (208)
                      |||+++.+||.    | .++| +.|+.|.|+..+ +.++||+++|+.+||.++|| |||+||+||.
T Consensus       103 v~g~~~~~~l~----g-~~~T-l~G~~l~v~~~~-~~v~vn~a~V~~~di~a~NG-vIHvID~VL~  160 (163)
T 1nyo_A          103 VAGQTSPANVV----G-TRQT-LQGASVTVTGQG-NSLKVGNADVVCGGVSTANA-TVYMIDSVLM  160 (163)
T ss_dssp             EESCCCTTTSC----E-EEEC-TTSSEEEEEECS-SCEEETTEECSSBCCCCSSE-EEBCBSSCCC
T ss_pred             ECCEEcHHHhC----C-cccc-CCCCEEEEEEEC-CEEEEeccEEEECceEcCCE-EEEEECcEeC
Confidence            99999999986    3 5666 578999999876 67999999999999999999 6999999996

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.79  E-value=1.9e-20  Score=165.22  Aligned_cols=121  Identities=19%  Similarity=0.264  Sum_probs=90.0

Q ss_pred             hhHHHHHh------cCCChHHHHHHHHHhc--ccccccccCCCCeEEEecCCcCCCCC-------C----cccccccccC
Q 046827           48 NNIIDALV------GTGDFNSWENIITAAD--ESTSAVVAFPFSATFFIPSNDFRFPL-------D----PFIFPYHIVP  108 (208)
Q Consensus        48 ~~Ii~~L~------~ag~F~tlv~~L~~a~--~~~~~~L~~~~~~TIFAPtD~Af~~l-------~----~~lL~yHVVP  108 (208)
                      .+|.+.|.      +.++|++|+++|+.++  +.+  .|++.+++|||||+|+||.++       +    .++|+||||+
T Consensus         6 ~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~--~L~~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~   83 (324)
T 1o70_A            6 TTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLD--DINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIK   83 (324)
T ss_dssp             -------------CCHHHHHHHHHHHHHTCSHHHH--HHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEES
T ss_pred             hhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHH--HHcCCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeC
Confidence            44555555      7899999999999998  554  577889999999999999754       2    3899999999


Q ss_pred             CccChhhhcccCCC-C-ccccccCCce-EEEEEcC---CCceEEcc----EEeeCCceeecCCeEEEEeCCccC
Q 046827          109 QRLSFSDLLLLKPL-S-RLPTLLPKKS-ILVTNTS---ASNFTLDD----SLVFYPDLYLTSTIAVHGIQNILD  172 (208)
Q Consensus       109 g~ls~~dL~~l~~g-s-~l~T~l~g~~-L~VT~~~---~~~~~Vn~----a~Vv~pDI~~~ngivIHgID~VL~  172 (208)
                      |+++.++|.....+ . .++|+ .|.. +.++..+   ...+++||    ++|+.+|+.++|| +||+||+||.
T Consensus        84 g~~~~~~l~~~~~~~~~~~~Tl-~g~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~~NG-vIhvID~VL~  155 (324)
T 1o70_A           84 DRLNVDKIRQKNANLIAQVPTV-NNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNG-YVHIIDHVLG  155 (324)
T ss_dssp             SCCCHHHHHHHTSSSCCCEEBS-STTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSE-EEEEESSCTT
T ss_pred             CeecHHHHhhccCCCceEEEcC-CCCceEEEEEeecCCceEEEEcCCceeEEEEeccccccCc-EEEEEchhhh
Confidence            99999999876421 1 46665 4543 4444322   23588885    9999999999999 6999999996

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.77  E-value=3.1e-20  Score=163.86  Aligned_cols=121  Identities=18%  Similarity=0.195  Sum_probs=96.9

Q ss_pred             hhHHHHHhcCCChHHHHHHHHHhccccccccc-CCCCeEEEecCCcCCCCC--------------C-----ccccccccc
Q 046827           48 NNIIDALVGTGDFNSWENIITAADESTSAVVA-FPFSATFFIPSNDFRFPL--------------D-----PFIFPYHIV  107 (208)
Q Consensus        48 ~~Ii~~L~~ag~F~tlv~~L~~a~~~~~~~L~-~~~~~TIFAPtD~Af~~l--------------~-----~~lL~yHVV  107 (208)
                      .++.+.+++.+.|++|..+++.+++..  +|+ ..+++|||||+|+||+++              +     .++|+||||
T Consensus       159 ~ti~~~l~~~~~fs~~~~~l~~~gl~~--~L~~~~~~~TvFAPtd~Af~~l~~~~~~~~~~~l~~~~~~~l~~iL~yHvv  236 (324)
T 1o70_A          159 TTVLGKLESDPMMSDTYKMGKFSHFND--QLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLA  236 (324)
T ss_dssp             SCHHHHHHHCGGGHHHHHHTTTTTTTG--GGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEE
T ss_pred             hhHHHHhhcCchHHHHHHHHHhhCHHH--HhCCCCCCeEEEEeChHHHHhhhhhchhHHHHHhccCcHHHHHHHHHhcEe
Confidence            468899999999999999999988764  465 578999999999999864              0     278999999


Q ss_pred             CC--ccChhhhcccCC--CC-ccccccCCceEEEEEc-CCCceEEc----cEEeeCCceeecCCeEEEEeCCccCC
Q 046827          108 PQ--RLSFSDLLLLKP--LS-RLPTLLPKKSILVTNT-SASNFTLD----DSLVFYPDLYLTSTIAVHGIQNILDY  173 (208)
Q Consensus       108 Pg--~ls~~dL~~l~~--gs-~l~T~l~g~~L~VT~~-~~~~~~Vn----~a~Vv~pDI~~~ngivIHgID~VL~~  173 (208)
                      |+  .|+.++|.....  +. .++|+ . ..|.|+.. .++.++||    +++|+.+||.++|| |||+||+||.+
T Consensus       237 ~~~~~~~~~~l~~~~~~~~~~~~~Tl-~-~~l~v~~~~~~~~v~v~~~~~~a~v~~~di~~~NG-vIHvID~VL~P  309 (324)
T 1o70_A          237 ISDKEYTMKDLVKFSQESGSVILPTF-R-DSLSIRVEEEAGRYVIIWNYKKINVYRPDVECTNG-IIHVIDYPLLE  309 (324)
T ss_dssp             EESSCCCHHHHHHHHHHSSSEEEECS-S-SEEEEEEEEETTEEEEEETTEEEEEEEEEEEETTE-EEEEESSCSCC
T ss_pred             CCcceEcHHHHhhhccCCCeeeeecc-C-CcEEEEEEecCCEEEEEecCceeEEEEcccccCCC-eEEEeceeecC
Confidence            99  899999976431  11 36665 4 56777542 23568887    89999999999999 69999999963

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	208
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.88
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.77
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.77

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=3.1e-24  Score=174.05  Aligned_cols=115  Identities=17%  Similarity=0.193  Sum_probs=98.0

Q ss_pred             hhhHHHHHhcCCChHHHHHHHHH-----hcccccccccCCCCeEEEecCCcCCCCCC--------------ccccccccc
Q 046827           47 LNNIIDALVGTGDFNSWENIITA-----ADESTSAVVAFPFSATFFIPSNDFRFPLD--------------PFIFPYHIV  107 (208)
Q Consensus        47 ~~~Ii~~L~~ag~F~tlv~~L~~-----a~~~~~~~L~~~~~~TIFAPtD~Af~~l~--------------~~lL~yHVV  107 (208)
                      ...|.+++....+|++|+.+|++     +++.+  +|+ .|+||||||+|+||.++.              .++|+|||+
T Consensus        27 ~~~v~~~a~~~p~lstl~~Al~a~~~~~a~L~~--~L~-~gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~yHVv  103 (163)
T d1nyoa_          27 QDPVAVAASNNPELTTLTAALSGQLNPQVNLVD--TLN-SGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVV  103 (163)
T ss_dssp             HSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHH--HHT-SSSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEE
T ss_pred             cchHHHHHhcCCchHHHHHHHhhccccccchhH--hhc-CCCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhhhhh
Confidence            45688889989999999999985     56654  465 489999999999998862              289999999


Q ss_pred             CCccChhhhcccCCCCccccccCCceEEEEEcCCCceEEccEEeeCCceeecCCeEEEEeCCccC
Q 046827          108 PQRLSFSDLLLLKPLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGIQNILD  172 (208)
Q Consensus       108 Pg~ls~~dL~~l~~gs~l~T~l~g~~L~VT~~~~~~~~Vn~a~Vv~pDI~~~ngivIHgID~VL~  172 (208)
                      +|+++.+++..     .+. ++.|..|.|+..+ +.++||+++|+.+||.++|| |||+||+||.
T Consensus       104 ~g~~~~~~l~~-----~~~-Tl~G~~l~v~~~~-~~i~v~~a~Vv~~di~a~NG-vIHvID~VLl  160 (163)
T d1nyoa_         104 AGQTSPANVVG-----TRQ-TLQGASVTVTGQG-NSLKVGNADVVCGGVSTANA-TVYMIDSVLM  160 (163)
T ss_dssp             ESCCCTTTSCE-----EEE-CTTSSEEEEEECS-SCEEETTEECSSBCCCCSSE-EEBCBSSCCC
T ss_pred             hhhhhhhhhhh-----hhh-hccCcceeEEecC-CEEEEeceEEEECCeecCCc-EEEEECcccc
Confidence            99999999853     344 4789999999876 68999999999999999999 5999999996

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.77  E-value=3.6e-20  Score=142.39  Aligned_cols=116  Identities=18%  Similarity=0.253  Sum_probs=84.2

Q ss_pred             cCCChHHHHHHHHHhcccccccccCCCCeEEEecCCcCCCCCC-----------cccccccccCCccChhhhcccCC--C
Q 046827           56 GTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLD-----------PFIFPYHIVPQRLSFSDLLLLKP--L  122 (208)
Q Consensus        56 ~ag~F~tlv~~L~~a~~~~~~~L~~~~~~TIFAPtD~Af~~l~-----------~~lL~yHVVPg~ls~~dL~~l~~--g  122 (208)
                      ++++|++|.++++..+......|++.+++|||||+|+||.++.           ..+|+|||+||+++.++|.....  .
T Consensus         2 ~~~~~~~f~~~i~~~g~~~~~~l~~~~~~TvFAPtn~Af~~~~~~~~~~~~~~l~~~l~yHiv~~~~~~~~l~~~~~~~~   81 (140)
T d1o70a1           2 ENGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLI   81 (140)
T ss_dssp             CHHHHHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSC
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHhcCChhhhcCCHHHHHHHHHhhccCCeEEHHHHhcCcccCc
Confidence            3578999999998876332124667789999999999998652           38999999999999999976432  2


Q ss_pred             CccccccCCceEEEEEcCC---CceEE----ccEEeeCCceeecCCeEEEEeCCccC
Q 046827          123 SRLPTLLPKKSILVTNTSA---SNFTL----DDSLVFYPDLYLTSTIAVHGIQNILD  172 (208)
Q Consensus       123 s~l~T~l~g~~L~VT~~~~---~~~~V----n~a~Vv~pDI~~~ngivIHgID~VL~  172 (208)
                      ..++|+..+....+...+.   ..+.+    ++++|+.+||.+.|| |||.||+||.
T Consensus        82 ~~~~t~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~~~NG-vIH~ID~VL~  137 (140)
T d1o70a1          82 AQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNG-YVHIIDHVLG  137 (140)
T ss_dssp             CCEEBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSE-EEEEESSCTT
T ss_pred             eEeeecCCCceEEEEEeccceeEEEEecCCcceEEEEeCCEecCCe-EEEEECCccC
Confidence            2456654444433332221   12333    458999999999999 6999999996

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.77  E-value=1.9e-20  Score=146.95  Aligned_cols=121  Identities=15%  Similarity=0.139  Sum_probs=87.2

Q ss_pred             hHHHHHhcCCChHHHHHHHHHhccccccccc-CCCCeEEEecCCcCCCCCC-------------------cccccccccC
Q 046827           49 NIIDALVGTGDFNSWENIITAADESTSAVVA-FPFSATFFIPSNDFRFPLD-------------------PFIFPYHIVP  108 (208)
Q Consensus        49 ~Ii~~L~~ag~F~tlv~~L~~a~~~~~~~L~-~~~~~TIFAPtD~Af~~l~-------------------~~lL~yHVVP  108 (208)
                      .|+|.++...+|+.|..+++.+++..  .|. ..+++|||||+|+||.++.                   ..+|+|||+|
T Consensus         2 Ti~~~l~~~p~ls~~~~~~~~s~l~~--~L~~~~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~Hiv~   79 (157)
T d1o70a2           2 TVLGKLESDPMMSDTYKMGKFSHFND--QLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAI   79 (157)
T ss_dssp             CHHHHHHHCGGGHHHHHHTTTTTTTG--GGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEE
T ss_pred             cHHHHHHhCccHHHHHHHHHhCCHHH--HHhCCCCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeEEec
Confidence            58899999999999999999888764  354 3578999999999998741                   2689999999


Q ss_pred             CccChhhhcc--c--CCCCccccccCCc-eEEEEEcCCCceEE----ccEEeeCCceeecCCeEEEEeCCccCC
Q 046827          109 QRLSFSDLLL--L--KPLSRLPTLLPKK-SILVTNTSASNFTL----DDSLVFYPDLYLTSTIAVHGIQNILDY  173 (208)
Q Consensus       109 g~ls~~dL~~--l--~~gs~l~T~l~g~-~L~VT~~~~~~~~V----n~a~Vv~pDI~~~ngivIHgID~VL~~  173 (208)
                      |+..+.+...  .  ..+....+++.+. .+.+...+ +.+.+    |+++|+.+|+.+.|| +||.||+||.+
T Consensus        80 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~V~~~Di~a~NG-viHvID~VLlp  151 (157)
T d1o70a2          80 SDKEYTMKDLVKFSQESGSVILPTFRDSLSIRVEEEA-GRYVIIWNYKKINVYRPDVECTNG-IIHVIDYPLLE  151 (157)
T ss_dssp             ESSCCCHHHHHHHHHHSSSEEEECSSSEEEEEEEEET-TEEEEEETTEEEEEEEEEEEETTE-EEEEESSCSCC
T ss_pred             ccccchhhhhhhhhccCCceeEEecCCcEEEEEEcCC-cEEEEecCCccceEEECCEecCCe-EEEEECceecC
Confidence            9876544321  1  1122222333443 33444443 44443    679999999999999 59999999963