Citrus Sinensis ID: 047235

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270------
Protein Sequence
MKTLPLRPSTISFSSSPPRSHHIPKLHPQLQSPRFSVLRSSIQPQPQAPPIKRESDTSRTEYKPGVLDDLFLSSFRNKLVQEVGLDSEKPGYDGLIELVNHLMMKGKSSSDARDAAQIRILVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSCQSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILPPLPKDDTTLKEPCLDICPTSSRRKEVAMNSNVEQCPKA
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccEEEEEEccccccccccEEEccccHHHcccccccccccccccHHHHHHHHccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccHcccccccccHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccEEEEEEHHEHcccccEEEEEEccccccHHHHHHHccccEEEccccccccEEEEEcccccccccccHcccccHHHcccccccccccccccccccccc
Coil and Loop (DISEMBL)
mktlplrpstisfssspprshhipklhpqlqsprfsvlrssiqpqpqappikresdtsrteykpgvlddlFLSSFRNKLVQEvgldsekpgydGLIELVNHLMmkgksssdaRDAAQIRILVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLmghctvnsvdlpdgtscqsgvFVERCKyleeskcvgvcintcklptqtffkdymgvpllmepnfsdyscqfkfgilpplpkddttlkepcldicptssrrkevamnsnveqcpka
Flexible Loop (DISEMBL)
mktlplrpstisfssspprshHIPKLHPQLQSPRFSVLRssiqpqpqappikresdtsrteyKPGVLDDLFLSSFRNKLVQevgldsekpgyDGLIELVNHLMMKGKSSSDARDAAQIRILVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSCQSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILPPLPKDDTTLKEPCLDIcptssrrkevamnsnveqcpka
Low Complexity Region (SEG)
MKTLplrpstisfssspprshhipKLHPQLQSPRFSVLRSSIqpqpqappIKRESDTSRTEYKPGVLDDLFLSSFRNKLVQEVGLDSEKPGYDGLIELVNHLMMKGKSSSDARDAAQIRILVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSCQSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILPPLPKDDTTLKEPCLDICPTSSRRKEVAMNSNVEQCPKA
Disordered region (IsUnstruct)
****************************************************************GVLDDLFLSSFRNKLVQEVGLDSEKPGYDGLIELVNHLMM**********AAQIRILVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSCQSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILPPLPKDDTTLKEPCLDIC*********************
Disordered Region (DISOPRED)
*************************************************************YKPGVLDDLFLSSFRNKLVQ****DSEKPGYDGLIELVNH***************QIRILVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVD****TSCQSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILPPLPKDDTTLKEPCLDICP***************QCP**
Disordered Region (DISEMBL)
**************************HPQLQSPRFSV***********************EYKPGVLDDLFLSSFRNKLVQEVGLDSEKPGYDGLIELVNHLMMK********DAAQIRILVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSCQSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILPPLPKDDTTLKEPCLDICPTSSR****************
Disordered Region (DISPRO)
************FS*SP**SHHIPKLHPQLQSPRFSVLRSSIQPQPQAPPI******SRTEYKPGVLDDLFLSSFRNKLVQEVGLDSEKPGYDGLIELVNHLMMKGKSSSDARDAAQIRILVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSCQSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILPPLPKDDTTLKEPCLDICPT*******************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKTLPLRPSTISFSSSPPRSHHIPKLHPQLQSPRFSVLRSSIQPQPQAPPIKRESDTSRTEYKPGVLDDLFLSSFRNKLVQEVGLDSEKPGYDGLIELVNHLMMKGKSSSDARDAAQIRILVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSCQSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILPPLPKDDTTLKEPCLDICPTSSRRKEVAMNSNVEQCPKA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
449436415	267	PREDICTED: uncharacterized protein LOC10	0.902	0.932	0.652	2e-98
449507826	267	PREDICTED: uncharacterized LOC101220175	0.902	0.932	0.648	8e-98
225437593	261	PREDICTED: uncharacterized protein LOC10	0.913	0.965	0.627	2e-95
357442215	260	hypothetical protein MTR_1g086840 [Medic	0.782	0.830	0.718	3e-91
363807932	264	uncharacterized protein LOC100788939 [Gl	0.775	0.810	0.728	8e-91
255548419	282	conserved hypothetical protein [Ricinus	0.931	0.911	0.660	5e-90
224068582	200	predicted protein [Populus trichocarpa]	0.724	1.0	0.727	2e-84
351720764	265	uncharacterized protein LOC100499918 [Gl	0.775	0.807	0.691	3e-83
242089393	277	hypothetical protein SORBIDRAFT_09g00257	0.775	0.772	0.649	3e-79
297814129	263	hypothetical protein ARALYDRAFT_912030 [	0.746	0.783	0.693	3e-77

>gi|449436415|ref|XP_004135988.1| PREDICTED: uncharacterized protein LOC101220175 [Cucumis sativus]

 Score =  364 bits (935), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 171/262 (65%), Positives = 219/262 (83%), Gaps = 13/262 (4%)

Query: 26  LHPQLQSP---RFSVLRSSIQPQP--------QAPPIKRESDTSRTEYKPGVLDDLFLSS 74
           LHP   SP   RF+  +S ++ +P        Q+  IK +  +S+ EYKPG+LDD FL+ 
Sbjct: 8   LHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIK-DGASSKAEYKPGILDDFFLNV 66

Query: 75  FRNKLVQEVGLDSEKPGYDGLIELVNHLMMKGKSSSDARDAAQIRILVSLFPPLVLKLYK 134
           FR+K+VQEVG DSEKPGYDGLIE+ + L M GK++S+  +A+ +RIL++LFPPL+LKLY+
Sbjct: 67  FRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEAS-VRILIALFPPLLLKLYR 125

Query: 135 ILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSCQSGVFVERCKYLEESK 194
           IL+SP+AGGK+AA+MVARVTALTCQWLMG CTVNS++LPDG+SCQSGVFVE+CKYLEESK
Sbjct: 126 ILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLEESK 185

Query: 195 CVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILPPLPKDDTTLKEPCLDI 254
           C+G+CINTCKLPTQ+FFKD MG+PLLMEPNF+DYSCQFKFG+LPPLP++D+ LKEPCL+I
Sbjct: 186 CIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKEPCLEI 245

Query: 255 CPTSSRRKEVAMNSNVEQCPKA 276
           CP ++RR+EV+   +  QCPKA
Sbjct: 246 CPNATRRREVSGKISAAQCPKA 267

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449507826|ref|XP_004163139.1| PREDICTED: uncharacterized LOC101220175 [Cucumis sativus]

 Score =  362 bits (930), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 170/262 (64%), Positives = 218/262 (83%), Gaps = 13/262 (4%)

Query: 26  LHPQLQSPR---FSVLRSSIQPQP--------QAPPIKRESDTSRTEYKPGVLDDLFLSS 74
           LHP   SP    F+  +S ++ +P        Q+  IK +  +S+ EYKPG+LDD FL+ 
Sbjct: 8   LHPPTISPAPLCFTSSKSHLRNRPFILSCSALQSGSIK-DGASSKAEYKPGILDDFFLNV 66

Query: 75  FRNKLVQEVGLDSEKPGYDGLIELVNHLMMKGKSSSDARDAAQIRILVSLFPPLVLKLYK 134
           FR+K+VQEVG DSEKPGYDGLIE+ + L M GK++S+  +A+ +RIL++LFPPL+LKLY+
Sbjct: 67  FRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEAS-VRILIALFPPLLLKLYR 125

Query: 135 ILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSCQSGVFVERCKYLEESK 194
           IL+SP+AGGK+AA+MVARVTALTCQWLMG CTVNS++LPDG+SCQSGVFVE+CKYLEESK
Sbjct: 126 ILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLEESK 185

Query: 195 CVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILPPLPKDDTTLKEPCLDI 254
           C+G+CINTCKLPTQ+FFKD MG+PLLMEPNF+DYSCQFKFG+LPPLP++D+ LKEPCL+I
Sbjct: 186 CIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKEPCLEI 245

Query: 255 CPTSSRRKEVAMNSNVEQCPKA 276
           CP ++RR+EV+   +  QCPKA
Sbjct: 246 CPNATRRREVSGKISAAQCPKA 267

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225437593|ref|XP_002271003.1| PREDICTED: uncharacterized protein LOC100253777 [Vitis vinifera] gi|297743993|emb|CBI36963.3| unnamed protein product [Vitis vinifera]

 Score =  355 bits (910), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 172/274 (62%), Positives = 216/274 (78%), Gaps = 22/274 (8%)

Query: 6   LRPSTISFSSSPPRSHHIPKLHPQLQSPRFSVLRSSIQPQPQAPPIKRESDTSRTEYKPG 65
           LRP  ++FS SPP+S         +++P F +  SS Q           +     EYKPG
Sbjct: 7   LRP--LTFSPSPPQSKL------SVKNPSFRISFSSAQ----------SNAVEAGEYKPG 48

Query: 66  VLDDLFLSSFRNKLVQEVGLDSEKPGYDGLIELVNHLMMKGKSSSDARDAAQIRILVSLF 125
           V DDLFL+ FR+++V+EVG DSEKPGYDGLI++ N LMMK KS+S  ++AA +RIL+SLF
Sbjct: 49  VFDDLFLNLFRSRMVKEVGWDSEKPGYDGLIDVANQLMMKSKSNSKVKEAA-VRILISLF 107

Query: 126 PPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSCQSGVFVE 185
           PP +L LY++L++P+ GGK+AAMMVARVTAL+CQWLMG CTVNSV+LPDG+SC SGVFVE
Sbjct: 108 PPFLLDLYRMLVAPIGGGKVAAMMVARVTALSCQWLMGPCTVNSVNLPDGSSCSSGVFVE 167

Query: 186 RCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILPPLPKDDT 245
           RCKYLEESKCVG+CINTCKLPTQTFFKDYMGVPL MEP+F++YSCQF FG+LPP P++D+
Sbjct: 168 RCKYLEESKCVGICINTCKLPTQTFFKDYMGVPLAMEPDFTNYSCQFSFGVLPPRPEEDS 227

Query: 246 TLKEPCLDICPTSSRRKEVAMNSN---VEQCPKA 276
           TLKEPCL+ICP ++RRKE+  N +   + QCPKA
Sbjct: 228 TLKEPCLEICPNATRRKEINRNMDNKELVQCPKA 261

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357442215|ref|XP_003591385.1| hypothetical protein MTR_1g086840 [Medicago truncatula] gi|355480433|gb|AES61636.1| hypothetical protein MTR_1g086840 [Medicago truncatula]

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 156/217 (71%), Positives = 187/217 (86%), Gaps = 1/217 (0%)

Query: 59  RTEYKPGVLDDLFLSSFRNKLVQEVGLDSEKPGYDGLIELVNHLMMKGKSSSDARDAAQI 118
           ++EYKPGV+DDLFL+ FR KLVQEVG +S+KPGYDGLIE+ N LMMKG ++SD  +A  +
Sbjct: 44  KSEYKPGVIDDLFLNLFRTKLVQEVGWESKKPGYDGLIEVANRLMMKGTTNSDTIEAT-V 102

Query: 119 RILVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSC 178
           RIL SLFPP +L+LYK+LI+P+ GGK+AA+MVARVTALTCQWLMG C VNSV+LP+GTS 
Sbjct: 103 RILRSLFPPFLLELYKMLIAPIGGGKVAAIMVARVTALTCQWLMGPCKVNSVELPNGTSW 162

Query: 179 QSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILP 238
            SGV VERCKYLEESKCVG+C+NTCK PTQTFFKD+MGVPLLM+PNF+DYSCQFKFG+LP
Sbjct: 163 NSGVHVERCKYLEESKCVGICLNTCKFPTQTFFKDHMGVPLLMKPNFADYSCQFKFGVLP 222

Query: 239 PLPKDDTTLKEPCLDICPTSSRRKEVAMNSNVEQCPK 275
           PLP+DDT LKEPCL+ CP +S R+  + N  V  CPK
Sbjct: 223 PLPEDDTVLKEPCLEACPNASLRRMASRNKGVTACPK 259

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807932|ref|NP_001242708.1| uncharacterized protein LOC100788939 [Glycine max] gi|255647168|gb|ACU24052.1| unknown [Glycine max]

 Score =  339 bits (869), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 158/217 (72%), Positives = 185/217 (85%), Gaps = 3/217 (1%)

Query: 59  RTEYKPGVLDDLFLSSFRNKLVQEVGLDSEKPGYDGLIELVNHLMMKGKSSSDARDAAQI 118
           ++EYKPGV DDLFL+ FRNKLVQEVG DSEKPGYDGLIE+ N LMMKG +++   +AA +
Sbjct: 50  KSEYKPGVFDDLFLNLFRNKLVQEVGWDSEKPGYDGLIEVANRLMMKGTTNTATVEAA-V 108

Query: 119 RILVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSC 178
           RIL SLFPP +L+LYK+LI P+ GGKIAAMMVARVT LTCQWLMG C +NSVDLPDG SC
Sbjct: 109 RILRSLFPPYLLELYKMLIVPIGGGKIAAMMVARVTVLTCQWLMGPCKLNSVDLPDGISC 168

Query: 179 QSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILP 238
            SGV+VERCKYLEESKCVG+C NTCK PTQ+FFKD+MGVPLLMEPNF DYSCQFKFG+LP
Sbjct: 169 SSGVYVERCKYLEESKCVGICTNTCKFPTQSFFKDHMGVPLLMEPNFGDYSCQFKFGVLP 228

Query: 239 PLPKDDTTLKEPCLDICPTSSRRKEVAMNSNVEQCPK 275
           PL  DDT +K+PCL+ CP +S+R+ VA N ++  CPK
Sbjct: 229 PL--DDTIVKDPCLEACPNASQRRTVARNIDITACPK 263

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548419|ref|XP_002515266.1| conserved hypothetical protein [Ricinus communis] gi|223545746|gb|EEF47250.1| conserved hypothetical protein [Ricinus communis]

 Score =  337 bits (863), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 179/271 (66%), Positives = 216/271 (79%), Gaps = 14/271 (5%)

Query: 6   LRPSTISFSSSPPRSHHIPKLHPQLQSPRFSVLRSSIQPQPQAPPIKRESDTSRTEYKPG 65
           LRP  +S S SPP    +P+L  +     F +  SS+Q +P+    K E   +R+EYKPG
Sbjct: 26  LRP--LSISVSPPSRLKLPRLFNR----SFRISCSSLQSEPE----KTEDVGTRSEYKPG 75

Query: 66  VLDDLFLSSFRNKLVQEVGLDSEKPGYDGLIELVNHLMMKGKSSSDARDAAQIRILVSLF 125
             DD FL+ FRNK+V EVG DSEK GYDGLIE+ N LM+ G S++D RDAA +RIL SLF
Sbjct: 76  FFDDFFLTLFRNKMVAEVGWDSEKAGYDGLIEVANRLMLTGTSNADTRDAA-VRILRSLF 134

Query: 126 PPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSCQSGVFVE 185
           PPL+L LYK+LISPL  GK+AA+MVARVTA+TCQWLMG CTVNS+DLPDG+SC+SGVFVE
Sbjct: 135 PPLLLDLYKLLISPLGEGKVAAIMVARVTAITCQWLMGTCTVNSIDLPDGSSCESGVFVE 194

Query: 186 RCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILPPLPKDDT 245
           RCKYLEESKCVG+C+NTCKLPTQ FFKDYMGVPLLMEPNF+DYSCQFKFG+LPP P+DD+
Sbjct: 195 RCKYLEESKCVGICVNTCKLPTQAFFKDYMGVPLLMEPNFTDYSCQFKFGVLPPQPEDDS 254

Query: 246 TLKEPCLDICPTSSRRKEVAMNSNVEQCPKA 276
           TLKEPCL+ CP +SRR+   ++ N+  CPKA
Sbjct: 255 TLKEPCLEACPIASRRQ---VSLNIAHCPKA 282

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224068582|ref|XP_002302776.1| predicted protein [Populus trichocarpa] gi|222844502|gb|EEE82049.1| predicted protein [Populus trichocarpa]

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 147/202 (72%), Positives = 175/202 (86%), Gaps = 2/202 (0%)

Query: 61  EYKPGVLDDLFLSSFRNKLVQEVGLDSEKPGYDGLIELVNHLMMKGKSSSDARDAAQIRI 120
           EY+    DD FL  FRNK+V+EVG DSEK GYDGLIE+ + LM++ ++ SD  DAA +RI
Sbjct: 1   EYRYQFYDDWFLDLFRNKMVKEVGWDSEKAGYDGLIEVASRLMLR-RTPSDTTDAA-VRI 58

Query: 121 LVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSCQS 180
           L SLFPP +L LYK L+SP+ GGK+AAMMVARVT +TCQWLMG C VNSVDLPDG+S +S
Sbjct: 59  LRSLFPPFLLHLYKSLVSPIGGGKLAAMMVARVTVITCQWLMGICKVNSVDLPDGSSWES 118

Query: 181 GVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILPPL 240
           GVFVERCKYLEESKCVG+C+NTCKLPTQTFFKDYMG+PLLMEPNF+DYSCQFKFG+LPPL
Sbjct: 119 GVFVERCKYLEESKCVGICVNTCKLPTQTFFKDYMGIPLLMEPNFNDYSCQFKFGVLPPL 178

Query: 241 PKDDTTLKEPCLDICPTSSRRK 262
           P+DD TLKEPCL++CP +S+R+
Sbjct: 179 PEDDGTLKEPCLEVCPIASKRR 200

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351720764|ref|NP_001237955.1| uncharacterized protein LOC100499918 [Glycine max] gi|255627671|gb|ACU14180.1| unknown [Glycine max]

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 150/217 (69%), Positives = 174/217 (80%), Gaps = 3/217 (1%)

Query: 59  RTEYKPGVLDDLFLSSFRNKLVQEVGLDSEKPGYDGLIELVNHLMMKGKSSSDARDAAQI 118
           +++YKPGV DDLFL  FRNKLVQEVG DS+K GYDGLIE+ N LMMKG ++SD  +AA +
Sbjct: 51  KSDYKPGVFDDLFLKLFRNKLVQEVGWDSKKAGYDGLIEVANRLMMKGTTNSDTVEAA-V 109

Query: 119 RILVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSC 178
           RIL SLFPP +L+LYK+LI+P+ GGKIAAMMVARVT LTCQWLMG C VNSVDLPDGTSC
Sbjct: 110 RILRSLFPPYLLELYKMLIAPIGGGKIAAMMVARVTVLTCQWLMGPCKVNSVDLPDGTSC 169

Query: 179 QSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILP 238
            SGV+VERCKYLEESKCVG+C +TCK PTQTFFKD+MGVPLLMEPNF+DYSCQFKFG+LP
Sbjct: 170 SSGVYVERCKYLEESKCVGICTHTCKFPTQTFFKDHMGVPLLMEPNFADYSCQFKFGVLP 229

Query: 239 PLPKDDTTLKEPCLDICPTSSRRKEVAMNSNVEQCPK 275
             P+DDT +K   L              N ++  CPK
Sbjct: 230 --PRDDTIVKGTLLGSMSKCKTTTNGCQNIDITACPK 264

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242089393|ref|XP_002440529.1| hypothetical protein SORBIDRAFT_09g002570 [Sorghum bicolor] gi|241945814|gb|EES18959.1| hypothetical protein SORBIDRAFT_09g002570 [Sorghum bicolor]

 Score =  300 bits (769), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 141/217 (64%), Positives = 174/217 (80%), Gaps = 3/217 (1%)

Query: 61  EYKPGVLDDLFLSSFRNKLVQEVGLDSEKPGYDGLIELVNHLMMKGKSSSDARDAAQIRI 120
           EY+P   DDL L+ FR+K+V+EVG DSEKPGY GL+E+ N LM+KGKS+ +   AA +R+
Sbjct: 61  EYRPSFADDLLLAFFRSKMVEEVGWDSEKPGYAGLMEVANRLMVKGKSAMETEQAA-VRV 119

Query: 121 LVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLPDGTSCQS 180
           L SLFPP++L LYK L+SP+A G++AAMM+AR TAL+CQWLMG C+VNSV LPDG S  S
Sbjct: 120 LQSLFPPVLLVLYKALLSPIANGQLAAMMLARATALSCQWLMGPCSVNSVTLPDGKSWSS 179

Query: 181 GVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILPPL 240
           GVFVE+CKYLEESKC+G+CINTCKLPTQTFFKD+MGV L MEPNF DYSCQF FG+ PP 
Sbjct: 180 GVFVEKCKYLEESKCLGICINTCKLPTQTFFKDHMGVDLYMEPNFEDYSCQFNFGVPPPP 239

Query: 241 PKDDTTLKEPCLDICPTSSRRKEVAMNSNVEQ--CPK 275
              D  LKEPCLDIC  + RR+E+  NS+ ++  CP+
Sbjct: 240 LDTDKALKEPCLDICTNARRRRELGRNSSPDELSCPQ 276

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297814129|ref|XP_002874948.1| hypothetical protein ARALYDRAFT_912030 [Arabidopsis lyrata subsp. lyrata] gi|297320785|gb|EFH51207.1| hypothetical protein ARALYDRAFT_912030 [Arabidopsis lyrata subsp. lyrata]

 Score =  294 bits (753), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 145/209 (69%), Positives = 173/209 (82%), Gaps = 3/209 (1%)

Query: 54  ESDTSRTEYKPGVLDDLFLSSFRNKLVQEVGLDSEKPGYDGLIELVNHLMMKGKSSSDAR 113
           +   S+ EYKPG+LDD F+ SFRNKLV+EVG DSEKPGY GLIELV  L++KG++ S+  
Sbjct: 49  DEGASKLEYKPGLLDDFFMQSFRNKLVEEVGSDSEKPGYVGLIELVKLLLLKGRTRSETS 108

Query: 114 DAAQIRILVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSVDLP 173
           DAA +RIL SLFPPL+L+LYK+LI+P+A GK+AA+MVARVT LTCQWLMG   VN +DLP
Sbjct: 109 DAA-VRILKSLFPPLILELYKLLIAPIAQGKLAALMVARVTVLTCQWLMGPSKVNIIDLP 167

Query: 174 DGTSCQSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFK 233
           +G S  SGVFVE+C+YLEESKCVGVCINTCKLPTQTFFKDYMGVPL+MEPNF DYSCQFK
Sbjct: 168 NGESWDSGVFVEKCQYLEESKCVGVCINTCKLPTQTFFKDYMGVPLVMEPNFKDYSCQFK 227

Query: 234 FGILPPLPKDDTTLKEPCLDICPTSSRRK 262
           FG+ P  P+DD  + EPC + C  + RRK
Sbjct: 228 FGVAP--PEDDGNVNEPCFETCSIAGRRK 254

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
TAIR|locus:504955232	258	AT4G01995 "AT4G01995" [Arabido	0.789	0.844	0.659	3.8e-78
TAIR|locus:2010856	250	AT1G64680 "AT1G64680" [Arabido	0.706	0.78	0.347	6.2e-30
TAIR|locus:505006097	264	D27 "AT1G03055" [Arabidopsis t	0.721	0.753	0.303	6.6e-26

TAIR|locus:504955232 AT4G01995 "AT4G01995" [Arabidopsis thaliana (taxid:3702)]

 Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
 Identities = 149/226 (65%), Positives = 179/226 (79%)

Query:    51 IKRESDTSRTEYKPGVLDDLFLSSFRNKLVQEVGLDSEKPGYDGLIELVNHLMMKGKSSS 110
             +K +    + EYKPG LDD F+ SFRNKLV+EVG DSEKPGY GLIELV  L++KG++ S
Sbjct:    41 VKSDEGAPKLEYKPGPLDDFFMQSFRNKLVEEVGSDSEKPGYVGLIELVKLLLLKGRTRS 100

Query:   111 DARDAAQIRILVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSV 170
             +  DAA +RIL SLFPPL+L+LYK+LI+P+A GK+AA+MVARVT LTCQWLMG   VN +
Sbjct:   101 ETSDAA-VRILKSLFPPLILELYKLLIAPIAQGKLAALMVARVTVLTCQWLMGPSKVNII 159

Query:   171 DLPDGTSCQSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSC 230
             DLP+G S  SGVFVE+C+YLEESKCVGVCINTCKLPTQTFFKDYMGVPL+MEPNF DYSC
Sbjct:   160 DLPNGESWDSGVFVEKCQYLEESKCVGVCINTCKLPTQTFFKDYMGVPLVMEPNFKDYSC 219

Query:   231 QFKFGILPPLPKDDTTLKEPCLDICPTSSRRKEVAMNSNVEQCPKA 276
             QFKFG+ PP  +DD  + EPC + C  + RRK   + S   +CP A
Sbjct:   220 QFKFGVAPP--EDDGNVNEPCFETCSIAGRRK---LKSG--ECPLA 258

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2010856 AT1G64680 "AT1G64680" [Arabidopsis thaliana (taxid:3702)]

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 73/210 (34%), Positives = 123/210 (58%)

Query:    59 RTEYKPGVLDDLFLSSFRNKLVQ---EVGLDSEKPG-----YDGLIELVNHLMMKGKSSS 110
             +T Y+ G+++ +F+  F  K+ +   +   D+++ G     Y+  +E V+  +M+G+S  
Sbjct:    36 KTRYEDGLVERVFMGLFARKMDKFGSKKKKDTKEKGFWEYDYESFVE-VSKRVMQGRSRV 94

Query:   111 DARDAAQIRILVSLFPPLVLKLYKILISPLAGGKIAAMMVARVTALTCQWLMGHCTVNSV 170
               ++A +  +L+S+ PP   + ++ L  P    K AA   A +T     WL+G   V  V
Sbjct:    95 QQQEAVR-EVLLSMLPPGAPEQFRKLFPPT---KWAAEFNAALTVPFFHWLVGPSQVIEV 150

Query:   171 DLPDGTSCQSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSC 230
             ++ +G   +SGV +++C+YLE S CVG+C+N CK+PTQ FF +  G+PL M PN+ D SC
Sbjct:   151 EV-NGVKQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMNPNYEDMSC 209

Query:   231 QFKFGILPPLPKDDTTLKEPCL-DICPTSS 259
             +  +G  PP  ++D   K+PCL DIC  S+
Sbjct:   210 EMIYGQAPPAFEEDVATKQPCLADICSMSN 239

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:505006097 D27 "AT1G03055" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 67/221 (30%), Positives = 121/221 (54%)

Query:    51 IKRESDTSRTEY---KPGVLDDLFLS----SFRNKLVQEV-GLDSEKPG--YDGLIELVN 100
             +K   +T+R E    K   ++D F S    ++ +K +Q+  G+ S      YD L++   
Sbjct:    46 LKAAKETARIETSNTKNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTAT 105

Query:   101 HLMMKGKSSSDARDAAQIRILVSL---FPPLVLKLYKILISPLAGGKIAAMMVARVTALT 157
              +      + D +   +  +L SL    P ++  L K+   P    K++  + A  T ++
Sbjct:   106 RV----SRNFDTKQQHEF-VLSSLDRALPTVISSLIKMAFPP---SKVSRELFALFTTIS 157

Query:   158 CQWLMGHCTVNSVDLPDGTSCQSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGV 217
               WL+G   V   ++ +G   +S V++E+C++LE+S CVG+C + CK+P+Q F K+ +G+
Sbjct:   158 FAWLVGPSEVRETEV-NGRKEKSVVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGM 216

Query:   218 PLLMEPNFSDYSCQFKFGILPPLPKDDTTLKEPCLDICPTS 258
             P+ MEP+F+D SC+  FG  PP  +DD  +K+PC + C ++
Sbjct:   217 PIYMEPDFNDLSCKMMFGREPPEIEDDPAMKQPCFEFCKSN 257


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      276       248   0.00079  114 3  11 22  0.42    33
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  187 KB (2107 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.03u 0.10s 20.13t   Elapsed:  00:00:01
  Total cpu time:  20.03u 0.10s 20.13t   Elapsed:  00:00:01
  Start:  Fri May 10 23:43:17 2013   End:  Fri May 10 23:43:18 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009536 "plastid" evidence=IDA

GO:0010223 "secondary shoot formation" evidence=IMP

GO:1901601 "strigolactone biosynthetic process" evidence=IGI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.II.884.1 hypothetical protein (200 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	276
pfam13225	85	pfam13225, DUF4033, Domain of unknown function (DU	2e-47

>gnl|CDD|221990 pfam13225, DUF4033, Domain of unknown function (DUF4033)

 Score =  152 bits (387), Expect = 2e-47
 Identities = 50/85 (58%), Positives = 63/85 (74%)

Query: 160 WLMGHCTVNSVDLPDGTSCQSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPL 219
           WL+G C VN V+   G   +SGV +++C+YLEES C G+C+NTCKLPTQTFFK+  G+PL
Sbjct: 1   WLVGPCEVNEVENGLGRGEKSGVLIKKCRYLEESGCAGMCVNTCKLPTQTFFKEEFGLPL 60

Query: 220 LMEPNFSDYSCQFKFGILPPLPKDD 244
            MEPNF DYSCQ  FG  PP  ++D
Sbjct: 61  TMEPNFEDYSCQMIFGQTPPPIEED 85

This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is approximately 80 amino acids in length. Length = 85

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	276
PF13225	86	DUF4033: Domain of unknown function (DUF4033)	100.0

>PF13225 DUF4033: Domain of unknown function (DUF4033)

Probab=100.00  E-value=6.4e-55  Score=343.15  Aligned_cols=85  Identities=56%  Similarity=1.171  Sum_probs=82.7

Q ss_pred             ccccceeeeeee-CCCCceeccceEeeccccccccCcccccccccCCchhhhhhhhcCCceeeccCcccceeeeeeCCCC
Q 047235          160 WLMGHCTVNSVD-LPDGTSCQSGVFVERCKYLEESKCVGVCINTCKLPTQTFFKDYMGVPLLMEPNFSDYSCQFKFGILP  238 (276)
Q Consensus       160 WLVGP~eV~~ve-v~dG~~~~sgV~IeKCRyLEeSgC~GmCvN~CKiPTQ~FF~e~~GlPLtM~PNFED~SCqm~FG~~P  238 (276)
                      ||||||+|+++| ..+|++++|||+||||||||||||+|||+|+||+|||+||+|+|||||||+||||||||||+||++|
T Consensus         1 WLvGp~~v~~~e~~~~~~~~~sgV~i~kCRyLEes~C~g~C~N~CK~PtQ~Ff~~~~Glpl~M~PNfed~SC~~~FG~~P   80 (86)
T PF13225_consen    1 WLVGPCEVNEVEENGNGRGQKSGVHIEKCRYLEESGCAGMCVNMCKIPTQTFFKEEFGLPLTMEPNFEDFSCQMIFGQTP   80 (86)
T ss_pred             CcccccEeeEeeccCCCccccceEEEEEeEEeecCCceeeeehhcccchHHHHHhccCCceEecCCCcCcEEEEEcCCCC
Confidence            999999999999 3488889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCC
Q 047235          239 PLPKDD  244 (276)
Q Consensus       239 Pp~eeD  244 (276)
                      ||+|||
T Consensus        81 pp~eeD   86 (86)
T PF13225_consen   81 PPIEED   86 (86)
T ss_pred             CCCCCC
Confidence            999998

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00