Citrus Sinensis ID: 047246
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 252 | ||||||
| 255575938 | 370 | conserved hypothetical protein [Ricinus | 0.912 | 0.621 | 0.573 | 3e-81 | |
| 357445211 | 406 | hypothetical protein MTR_2g005330 [Medic | 0.924 | 0.573 | 0.527 | 5e-80 | |
| 356560121 | 385 | PREDICTED: uncharacterized protein LOC10 | 0.920 | 0.602 | 0.538 | 6e-78 | |
| 356541848 | 387 | PREDICTED: uncharacterized protein LOC10 | 0.920 | 0.599 | 0.541 | 3e-77 | |
| 224129464 | 299 | predicted protein [Populus trichocarpa] | 0.884 | 0.745 | 0.541 | 3e-76 | |
| 240255999 | 389 | uncharacterized protein [Arabidopsis tha | 0.797 | 0.516 | 0.645 | 4e-75 | |
| 356566943 | 382 | PREDICTED: uncharacterized protein LOC10 | 0.888 | 0.586 | 0.527 | 9e-73 | |
| 92893672 | 355 | Protein of unknown function DUF707 [Medi | 0.805 | 0.571 | 0.622 | 2e-72 | |
| 224120054 | 314 | predicted protein [Populus trichocarpa] | 0.920 | 0.738 | 0.517 | 3e-72 | |
| 356530023 | 343 | PREDICTED: uncharacterized protein LOC10 | 0.888 | 0.653 | 0.524 | 4e-72 |
| >gi|255575938|ref|XP_002528866.1| conserved hypothetical protein [Ricinus communis] gi|223531717|gb|EEF33540.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 163/284 (57%), Positives = 195/284 (68%), Gaps = 54/284 (19%)
Query: 2 NLLAIAVGIKQKKIVDQI---FPSKDFVVMLFYYYGVVDERKDLVWADRAIHVSAANQTK 58
+LLA+AVGI QK +VDQI FP DFVVMLF+Y GVVD+ +DL W+D AIHVSA NQTK
Sbjct: 108 SLLALAVGINQKVVVDQIVKKFPLSDFVVMLFHYDGVVDKWRDLPWSDHAIHVSAVNQTK 167
Query: 59 YTRGRVYVHGWFAKHFLHPDIVAEYNYIFLWDEDIGVAIFNPRQYLSIVKDEGLEISQPA 118
+ WFAK FLHPDIV+EY+Y+FLWDED+GV FNP++YLSI++DEGLEISQPA
Sbjct: 168 W---------WFAKRFLHPDIVSEYDYLFLWDEDLGVENFNPKRYLSIIRDEGLEISQPA 218
Query: 119 LDPFKSEVHHLITARRRNSKAHRRIYKFKASGRCDDYSTAPPCIGWVEMMAPVFSKAAWR 178
LDP KS V+H ITAR+ S HRRIYKFK SGRC ST+PPCIGWVEMMAPVFS AAWR
Sbjct: 219 LDPTKSAVYHPITARQPKSTVHRRIYKFKGSGRCYGNSTSPPCIGWVEMMAPVFSTAAWR 278
Query: 179 CRRSRFCLQSSYCSDFVNDLIHTCGLDVQLRYCAQ------------------------- 213
C + +Q NDLIH GLD QL YCAQ
Sbjct: 279 C--AWHMIQ--------NDLIHAWGLDFQLGYCAQGDRTKNVGVVDSEYIVHLGLLTLGV 328
Query: 214 -----VRRQSYIKMQISRNRWKHSVEDDQCWVDPYQQLANQTSH 252
VR+QS ++MQI +RWK++ ++D+CWVDP+QQ NQTS+
Sbjct: 329 FNGTEVRKQSSVEMQIFLDRWKNAAKEDKCWVDPFQQ--NQTSN 370
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357445211|ref|XP_003592883.1| hypothetical protein MTR_2g005330 [Medicago truncatula] gi|355481931|gb|AES63134.1| hypothetical protein MTR_2g005330 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356560121|ref|XP_003548344.1| PREDICTED: uncharacterized protein LOC100797710 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356541848|ref|XP_003539384.1| PREDICTED: uncharacterized protein LOC100526994 [Glycine max] | Back alignment and taxonomy information |
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| >gi|224129464|ref|XP_002328723.1| predicted protein [Populus trichocarpa] gi|222839021|gb|EEE77372.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|240255999|ref|NP_193588.5| uncharacterized protein [Arabidopsis thaliana] gi|332658658|gb|AEE84058.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356566943|ref|XP_003551684.1| PREDICTED: uncharacterized protein LOC100798633 [Glycine max] | Back alignment and taxonomy information |
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| >gi|92893672|gb|ABE91850.1| Protein of unknown function DUF707 [Medicago truncatula] gi|92893916|gb|ABE91966.1| Protein of unknown function DUF707 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224120054|ref|XP_002331125.1| predicted protein [Populus trichocarpa] gi|222872853|gb|EEF09984.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356530023|ref|XP_003533584.1| PREDICTED: uncharacterized protein LOC100814260 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 252 | ||||||
| TAIR|locus:2124608 | 389 | AT4G18530 "AT4G18530" [Arabido | 0.797 | 0.516 | 0.645 | 3.6e-80 | |
| TAIR|locus:2202124 | 438 | AT1G11170 [Arabidopsis thalian | 0.765 | 0.440 | 0.516 | 7.8e-58 | |
| TAIR|locus:2008425 | 425 | AT1G61240 [Arabidopsis thalian | 0.793 | 0.470 | 0.5 | 1.8e-56 | |
| TAIR|locus:2031905 | 401 | AT1G13000 [Arabidopsis thalian | 0.746 | 0.468 | 0.441 | 4.8e-39 | |
| TAIR|locus:2086721 | 398 | AT3G27470 "AT3G27470" [Arabido | 0.746 | 0.472 | 0.431 | 4.8e-39 | |
| TAIR|locus:2079291 | 396 | AT3G26440 [Arabidopsis thalian | 0.746 | 0.474 | 0.427 | 5.5e-38 | |
| TAIR|locus:2008640 | 404 | AT1G67850 "AT1G67850" [Arabido | 0.746 | 0.465 | 0.431 | 6.3e-37 | |
| TAIR|locus:504956279 | 381 | AT1G24570 [Arabidopsis thalian | 0.801 | 0.530 | 0.413 | 1.7e-36 | |
| TAIR|locus:2205140 | 382 | AT1G08040 [Arabidopsis thalian | 0.746 | 0.492 | 0.417 | 9.2e-36 | |
| TAIR|locus:2057557 | 374 | AT2G28310 "AT2G28310" [Arabido | 0.746 | 0.502 | 0.413 | 1.5e-35 |
| TAIR|locus:2124608 AT4G18530 "AT4G18530" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 719 (258.2 bits), Expect = 3.6e-80, Sum P(2) = 3.6e-80
Identities = 144/223 (64%), Positives = 169/223 (75%)
Query: 1 MNLLAIAVGIKQKKIVDQI---FPSKDFVVMLFYYYGVVDERKDLVWADRAIHVSAANQT 57
M+LLA+AVGIKQK++V+++ FP +DF VMLF+Y GVVD+ K W + AIHVS NQT
Sbjct: 108 MSLLAMAVGIKQKELVNKVIQKFPPRDFAVMLFHYDGVVDDWKQYPWNNHAIHVSVMNQT 167
Query: 58 KYTRGRVYVHGWFAKHFLHPDIVAEYNYIFLWDEDIGVAIFNPRQYLSIVKDEGLEISQP 117
K+ WFAK FLHPDIVAEY YIFLWDED+GV FNP++YLSIVK+EGLEISQP
Sbjct: 168 KW---------WFAKRFLHPDIVAEYEYIFLWDEDLGVGHFNPQRYLSIVKEEGLEISQP 218
Query: 118 ALDPFKSEVHHLITARRRNSKAHRRIYKFKASGRCDDYSTAPPCIGWVEMMAPVFSKAAW 177
ALD KSEVHH ITARR+ SK HRR+YK+K SGRCDD+ST PPCIGWVEMMAPVFS+AAW
Sbjct: 219 ALDTSKSEVHHPITARRKKSKVHRRMYKYKGSGRCDDHSTNPPCIGWVEMMAPVFSRAAW 278
Query: 178 RCRRSRFCLQSSYCSDFVNDLIHTCGLDVQLRYCAQVRRQSYI 220
RC S + +Q NDLIH GLD QL YCAQ R+ +
Sbjct: 279 RC--SWYMIQ--------NDLIHAWGLDTQLGYCAQGDRKKNV 311
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| TAIR|locus:2202124 AT1G11170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2008425 AT1G61240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2031905 AT1G13000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2086721 AT3G27470 "AT3G27470" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2079291 AT3G26440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2008640 AT1G67850 "AT1G67850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:504956279 AT1G24570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2205140 AT1G08040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2057557 AT2G28310 "AT2G28310" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00035311001 | SubName- Full=Chromosome undetermined scaffold_77, whole genome shotgun sequence; (411 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 252 | |||
| pfam05212 | 294 | pfam05212, DUF707, Protein of unknown function (DU | 6e-81 |
| >gnl|CDD|218501 pfam05212, DUF707, Protein of unknown function (DUF707) | Back alignment and domain information |
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Score = 244 bits (625), Expect = 6e-81
Identities = 103/273 (37%), Positives = 135/273 (49%), Gaps = 61/273 (22%)
Query: 3 LLAIAVGIKQKKIVDQIFP--SKDFVVMLFYYYGVVDERKDLVWADRAIHVSAANQTKYT 60
LLA VG QK VD S +F ++LF+Y G E +L W+ +AIHVSA QTK+
Sbjct: 44 LLAFTVGYSQKANVDACVKKFSDNFTIVLFHYDGRTTEWDELEWSKKAIHVSAKKQTKW- 102
Query: 61 RGRVYVHGWFAKHFLHPDIVAEYNYIFLWDEDIGVAIFNPRQYLSIVKDEGLEISQPALD 120
WFAK FLHPDIVA Y YIFLWDED+GV F+ +Y+ IVK GLEISQP LD
Sbjct: 103 --------WFAKRFLHPDIVAPYEYIFLWDEDLGVDNFDAEEYIKIVKKHGLEISQPGLD 154
Query: 121 PFKSEVHHLITARRRNSKAHRRIYKFKASGRCDDYSTAPPCIGWVEMMAPVFSKAAWRCR 180
P + ++ IT RR + + H+ + ST PPC G+VE+MAPVFS+ AWRC
Sbjct: 155 PDRGQITWRITKRRGDGEVHKDTREKGRCCD---NSTGPPCTGFVEIMAPVFSRDAWRC- 210
Query: 181 RSRFCLQSSYCSDFVNDLIHTCGLDVQLRYCAQ--------------------------- 213
+Q NDL+H GLD LR C +
Sbjct: 211 -VWHMIQ--------NDLVHGWGLDFALRRCVEPAHEKIGVVDSQWVVHQGIPSLGSQGT 261
Query: 214 ----------VRRQSYIKMQISRNRWKHSVEDD 236
VR + + + + RW + ++
Sbjct: 262 AENGKAPWQGVRDRCKAEWTMFQRRWAAAEKEY 294
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This family consists of several uncharacterized proteins from Arabidopsis thaliana. Length = 294 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 252 | |||
| PF05212 | 294 | DUF707: Protein of unknown function (DUF707); Inte | 100.0 |
| >PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana | Back alignment and domain information |
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Probab=100.00 E-value=3.4e-107 Score=741.77 Aligned_cols=213 Identities=60% Similarity=1.016 Sum_probs=207.6
Q ss_pred Cceeeeeeccccccccccc--CCCCCeEEEEEEEcCcccccccccccCceEEEEeecccccccccccchhhhhhcccCcc
Q 047246 1 MNLLAIAVGIKQKKIVDQI--FPSKDFVVMLFYYYGVVDERKDLVWADRAIHVSAANQTKYTRGRVYVHGWFAKHFLHPD 78 (252)
Q Consensus 1 ~~Lla~~VG~kqk~~Vd~~--f~~~nF~vmLFhYDg~vd~w~d~ews~~aiHv~a~~qtKw~~~~~~~~~wfaKrfLHPd 78 (252)
+||||||||||||++||++ ++++|||||||||||+||+|++||||++||||+++||||| ||||||||||
T Consensus 42 k~Lla~~VG~kqk~~vd~~v~Kf~~nF~i~LfhYDg~vd~w~~~~ws~~aiHv~~~kqtKw---------w~akrfLHPd 112 (294)
T PF05212_consen 42 KYLLAMTVGIKQKDNVDAIVKKFSDNFDIMLFHYDGRVDEWDDFEWSDRAIHVSARKQTKW---------WFAKRFLHPD 112 (294)
T ss_pred ceEEEEEecHHHHhhhhHHHhhhccCceEEEEEecCCcCchhhcccccceEEEEeccceEE---------eehhhhcChh
Confidence 6999999999999999999 3399999999999999999999999999999999999999 9999999999
Q ss_pred ccccceEEEeeccccccCCCChHHHHHHHHHhCCcccCCCcCCCCCceeeeeeeeccCcccceeeccccCCCCCCCCCCC
Q 047246 79 IVAEYNYIFLWDEDIGVAIFNPRQYLSIVKDEGLEISQPALDPFKSEVHHLITARRRNSKAHRRIYKFKASGRCDDYSTA 158 (252)
Q Consensus 79 iV~~YdYiFlwDeDl~vd~f~~~ryl~Ivk~~gLeISQPALd~~~s~~~h~iT~R~~~~~vHr~~~~~~~~~~c~~~~~~ 158 (252)
||++|||||||||||+||||+|+|||+||+++||||||||||+++|++||+||+|++++++|| +.+++++|.++||+
T Consensus 113 iv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~~~~~~iT~R~~~~~vhr---~~~~~~~~~~~~~~ 189 (294)
T PF05212_consen 113 IVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSSEIHHPITKRRPDSEVHR---KTRGGPRCCDDSTG 189 (294)
T ss_pred hhccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCceeeeeEEeecCCceeEe---ccCCCCCcCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999 45778899999999
Q ss_pred CCcceeEeeeccccchhHHHhhhhcccccCCcccCCCCCCccccccccchhhHHH-------------------------
Q 047246 159 PPCIGWVEMMAPVFSKAAWRCRRSRFCLQSSYCSDFVNDLIHTCGLDVQLRYCAQ------------------------- 213 (252)
Q Consensus 159 ppctgfVEvMAPVFSR~AWrCvw~~f~~~s~~~~miQNDLvhGWGLD~~~~~Ca~------------------------- 213 (252)
||||||||||||||||+||||||| ||||||+|||||||+|+||+.
T Consensus 190 ppct~fVEiMAPVFSr~Awrcvw~----------miqNDLvhGWGLDf~~~~c~~~~~~kiGVVDs~~VvH~gvptLG~~ 259 (294)
T PF05212_consen 190 PPCTGFVEIMAPVFSRAAWRCVWH----------MIQNDLVHGWGLDFKWGYCAGDRHKKIGVVDSQYVVHTGVPTLGGQ 259 (294)
T ss_pred CCcceEEEEecceechHHHHHHHh----------cccCCCccccchhhhHHHHhccccccEEEEeeEEEEEcCCCcCCCc
Confidence 999999999999999999999999 999999999999999999997
Q ss_pred ------------HHHhhHHHHHHHHHHHhhhhhc
Q 047246 214 ------------VRRQSYIKMQISRNRWKHSVED 235 (252)
Q Consensus 214 ------------vr~~~~~e~~~f~~Rw~~a~~~ 235 (252)
||+||+.||++|++||++|+++
T Consensus 260 ~~~~~~~~~~~~Vr~r~~~E~~~F~~R~~~a~~~ 293 (294)
T PF05212_consen 260 GNSEKGKDPREEVRRRSFAEMRIFQKRWANAVKE 293 (294)
T ss_pred cccccCCchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999986
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00