Citrus Sinensis ID: 047356

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-
Protein Sequence
MADYQKIHPVMDVEAAASTKEKGSSSHQQQNPPQRSIPVMHPNPPKKSRSCFCKCFCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNCSFNLKL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHEEEEEcccccEEEEEEEEEccccccccccEEEEEEEEEEEEccccEEEEEEccccEEEEEEccEEEEEEEccccccccccEEEEEEEEEEcccccHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEccccccEEEEEccEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEcccccccEEEEEEEEEEEccccEEEEEEccEEEEEEEEccEEEcccccccccccccccEEEEEEEEccccccHHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEcEEEEEEEEEEEEEccccccccEEccccEEEEEEc
Coil and Loop (DISEMBL)
madyqkihpvmDVEAAastkekgssshqqqnppqrsipvmhpnppkksrscfckcfcwTVSILVLLLIILAAIGGILYlvfqpklpkysvdslriRDLRLNLDLTLYAQFDvkitannpnkkigiYYEKGGKLSVWDERAKLCEgflpkfyqghqnvTKLDVALTGQTQYGSTLMKAIQEQQqtgripldlkvdapVAIKLGKLKLRKVKILGQCLLVVDSLSannkisikasncsfnlkl
Flexible Loop (DISEMBL)
madyqkihpvMDVEAAASTKekgssshqqqnppqrsipvMHPNPPKKSRSCFCKCFCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQfdvkitannpnkkigiyyEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQEQQQtgripldlkvDAPVAIKlgklklrkvKILGQCLLVVDSlsannkisikasncsfnlkl
Low Complexity Region (SEG)
MADYQKIHPVMDVEAAASTKEKGSSSHQQQNPPQRSIPVMHPNPPkksrscfckcfcWTVSilvllliilaaiggilylvFQPKLPKYSVdslrirdlrlnldltlYAQFDVKITANNPNkkigiyyekggkLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNCSFNLKL
Disordered region (IsUnstruct)
*************************************************SCFCKCFCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIK**********
Disordered Region (DISOPRED)
******I**********************************************KCFCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQ****VTKLDVALTGQTQYGSTLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVV***************CSFNLKL
Disordered Region (DISEMBL)
MADYQKIHPVMDVEA********************SIPVMHPNPPKKSRSCFCKCFCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNCSFNLKL
Disordered Region (DISPRO)
************************************************RSCFCKCFCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNCSFNLKL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADYQKIHPVMDVEAAASTKEKGSSSHQQQNPPQRSIPVMHPNPPKKSRSCFCKCFCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNCSFNLKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	241
255557118	267	conserved hypothetical protein [Ricinus	1.0	0.902	0.614	2e-88
225454575	249	PREDICTED: uncharacterized protein LOC10	0.991	0.959	0.705	7e-86
224116490	202	predicted protein [Populus trichocarpa]	0.838	1.0	0.777	6e-83
224078956	190	predicted protein [Populus trichocarpa]	0.784	0.994	0.793	4e-79
356535290	252	PREDICTED: uncharacterized protein LOC10	0.991	0.948	0.657	1e-76
297853416	239	hypothetical protein ARALYDRAFT_892695 [	0.991	1.0	0.589	9e-75
356576601	250	PREDICTED: uncharacterized protein LOC10	0.991	0.956	0.638	6e-72
225466173	251	PREDICTED: uncharacterized protein LOC10	1.0	0.960	0.581	2e-70
15221846	239	late embryogenesis abundant hydroxyproli	0.991	1.0	0.593	6e-69
356569943	244	PREDICTED: protein NDR1-like [Glycine ma	0.995	0.983	0.560	4e-62

>gi|255557118|ref|XP_002519591.1| conserved hypothetical protein [Ricinus communis] gi|223541249|gb|EEF42802.1| conserved hypothetical protein [Ricinus communis]

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 164/267 (61%), Positives = 198/267 (74%), Gaps = 26/267 (9%)

Query: 1   MADYQKIHPVMDVEA---------AASTKEKGSSSHQQQNPP-------QRSIPV-MHPN 43
           M D QKIHP++D++A         ++S  EKG+  H +  PP        R+I     PN
Sbjct: 1   MTDSQKIHPMVDMKAPSVFPLVPQSSSVSEKGNPLHHEHQPPPLQTSIRNRAIETETAPN 60

Query: 44  PPKKS---------RSCFCKCFCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLR 94
               +         RSCFCKC CWT+ +++ LL+I+ AI GILYL+FQPK+PKYSVDSLR
Sbjct: 61  TRTTAPAAATTKTARSCFCKCICWTICLILFLLVIIGAIAGILYLIFQPKIPKYSVDSLR 120

Query: 95  IRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGH 154
           I DLRLN D+TLYA+F+VKITANNPNKKIGIYY+KGG+LSVW     LC G +P FYQGH
Sbjct: 121 ISDLRLNFDMTLYAKFNVKITANNPNKKIGIYYDKGGQLSVWYIDTMLCAGSIPTFYQGH 180

Query: 155 QNVTKLDVALTGQTQYGSTLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQ 214
           +N TKLDV+L+GQ+QYGSTLM A+QEQQQTG IPLDLKV APVA+KLG+LKLRKV+ILG 
Sbjct: 181 RNTTKLDVSLSGQSQYGSTLMTALQEQQQTGSIPLDLKVSAPVAVKLGRLKLRKVRILGD 240

Query: 215 CLLVVDSLSANNKISIKASNCSFNLKL 241
           CLLVVDSL+ NN +SIK SNC F LKL
Sbjct: 241 CLLVVDSLTTNNLLSIKTSNCKFRLKL 267

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454575|ref|XP_002263732.1| PREDICTED: uncharacterized protein LOC100249528 [Vitis vinifera] gi|297737207|emb|CBI26408.3| unnamed protein product [Vitis vinifera]

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 177/251 (70%), Positives = 199/251 (79%), Gaps = 12/251 (4%)

Query: 1   MADYQKIHPVMDVEAAAST---------KEKGSSSHQQQNPP-QRSIPVMHPNPPKKSRS 50
           MAD+QKIHPV+D EA  +           EKG       +PP QR+IPV+H  PPK  RS
Sbjct: 1   MADHQKIHPVVDPEAPPTEPLVPRGSFRSEKGDPFQHPPDPPLQRTIPVIHSKPPK--RS 58

Query: 51  CFCKCFCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQF 110
           C CKC CWT+S+LVLLL+I+ AI G+LYLVFQPKLPKYSVDSLRI D +LN D+TLYA+F
Sbjct: 59  CCCKCMCWTISLLVLLLVIVGAIAGVLYLVFQPKLPKYSVDSLRITDFQLNYDMTLYAKF 118

Query: 111 DVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQY 170
           D+KI ANNPNKKIGIYYEKGGKLSVW    KLC G LPKFYQGHQN T L+V LTGQTQY
Sbjct: 119 DMKIKANNPNKKIGIYYEKGGKLSVWYTNTKLCHGSLPKFYQGHQNTTVLNVVLTGQTQY 178

Query: 171 GSTLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISI 230
           GSTLM A+QEQQQ  RIPLDLKVD PVAIKLGKLKL+KV+ L +CLLVVDSLSANN ISI
Sbjct: 179 GSTLMTALQEQQQKRRIPLDLKVDVPVAIKLGKLKLKKVRFLVECLLVVDSLSANNLISI 238

Query: 231 KASNCSFNLKL 241
           +AS+C F LKL
Sbjct: 239 RASDCRFRLKL 249

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116490|ref|XP_002331910.1| predicted protein [Populus trichocarpa] gi|222874582|gb|EEF11713.1| predicted protein [Populus trichocarpa]

 Score =  313 bits (801), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 157/202 (77%), Positives = 176/202 (87%)

Query: 40  MHPNPPKKSRSCFCKCFCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLR 99
           M  + P+K+RSC CKC CWTV +LVLLL+I+ A  GILYLVF+PK+P YSVDSL I DLR
Sbjct: 1   MQSSKPQKTRSCCCKCVCWTVGLLVLLLVIVGATAGILYLVFKPKIPNYSVDSLSISDLR 60

Query: 100 LNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTK 159
           LN D++LYA+FDVKITANNPNKKIGIYYEKGG LSVW    KLC G +PKFYQGHQN+TK
Sbjct: 61  LNFDMSLYAKFDVKITANNPNKKIGIYYEKGGLLSVWYTNTKLCAGSIPKFYQGHQNITK 120

Query: 160 LDVALTGQTQYGSTLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVV 219
           LDV+LTGQTQYGSTL++A+QEQQQTGRIPLDLKVDAPV+IKLG+LKLRKV ILG CLLVV
Sbjct: 121 LDVSLTGQTQYGSTLLRALQEQQQTGRIPLDLKVDAPVSIKLGRLKLRKVTILGDCLLVV 180

Query: 220 DSLSANNKISIKASNCSFNLKL 241
           DSLS NN ISIKASNC F LKL
Sbjct: 181 DSLSTNNLISIKASNCRFKLKL 202

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078956|ref|XP_002305694.1| predicted protein [Populus trichocarpa] gi|222848658|gb|EEE86205.1| predicted protein [Populus trichocarpa]

 Score =  300 bits (767), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 150/189 (79%), Positives = 167/189 (88%)

Query: 53  CKCFCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQFDV 112
           CKC CWTV +LVLLL I+ A  GILYLVF+PK+P YSVDSLRI DLRLN D+TLYA FDV
Sbjct: 2   CKCICWTVGLLVLLLGIVGATAGILYLVFKPKIPNYSVDSLRISDLRLNFDMTLYATFDV 61

Query: 113 KITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGS 172
           KITANNPNKKIGIYYEKGG LSVW    KLC+G +PKFYQGHQN+TKLDV+LTGQT+YGS
Sbjct: 62  KITANNPNKKIGIYYEKGGLLSVWYTDTKLCQGSIPKFYQGHQNITKLDVSLTGQTRYGS 121

Query: 173 TLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIKA 232
           TLM+ +QEQQQTGRIPLDLK+DAPV+IKLG+LKLRKV+ILG CLLVV+SLS NN ISIKA
Sbjct: 122 TLMRTLQEQQQTGRIPLDLKIDAPVSIKLGRLKLRKVRILGNCLLVVNSLSTNNLISIKA 181

Query: 233 SNCSFNLKL 241
           SNC F LKL
Sbjct: 182 SNCKFRLKL 190

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535290|ref|XP_003536181.1| PREDICTED: uncharacterized protein LOC100813932 [Glycine max]

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 167/254 (65%), Positives = 196/254 (77%), Gaps = 15/254 (5%)

Query: 1   MADYQK--IHPVMDVEA-----------AASTKEKGSSSHQQQNPPQRSIPVMHPNPPKK 47
           MAD+Q+  IHP M+ EA            +S  EKG   H       R++P  +P P K+
Sbjct: 1   MADHQRLRIHP-MEGEAPPPPTTPLVPPGSSRSEKGVPLHHPPPL-PRAMPAAYPTPHKR 58

Query: 48  SRSCFCKCFCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLY 107
           S SC CKC CWT+ ++VLLLII AA  GILYLVFQPKLP YSVD+LRI DLRLN D++LY
Sbjct: 59  SSSCCCKCICWTIILVVLLLIIFAASVGILYLVFQPKLPDYSVDTLRISDLRLNFDMSLY 118

Query: 108 AQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQ 167
           A+FDVKITA NPNKKIGIYYEKGGKLSVW    +LCEG LP+FYQGH+N T L+V+L+GQ
Sbjct: 119 AKFDVKITATNPNKKIGIYYEKGGKLSVWYTNTRLCEGSLPQFYQGHENKTVLNVSLSGQ 178

Query: 168 TQYGSTLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNK 227
            Q GSTLM A+Q+QQQTGRIPLDLKV AP+AIKLG+LKL KV++LG+CLLVVDSLS+NN 
Sbjct: 179 VQSGSTLMNALQQQQQTGRIPLDLKVHAPIAIKLGRLKLMKVRVLGECLLVVDSLSSNNL 238

Query: 228 ISIKASNCSFNLKL 241
           ISIKASNC F LKL
Sbjct: 239 ISIKASNCKFRLKL 252

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297853416|ref|XP_002894589.1| hypothetical protein ARALYDRAFT_892695 [Arabidopsis lyrata subsp. lyrata] gi|297340431|gb|EFH70848.1| hypothetical protein ARALYDRAFT_892695 [Arabidopsis lyrata subsp. lyrata]

 Score =  285 bits (730), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 142/241 (58%), Positives = 184/241 (76%), Gaps = 2/241 (0%)

Query: 1   MADYQKIHPVMDVEAAASTKEKGSSSHQQQNPPQRSIPVMHPNPPKKSRSCFCKCFCWTV 60
           M D QKIHPV+ +EA  +     +       P QR  P++ P  P K+R+  CK FCW +
Sbjct: 1   MGDQQKIHPVLQMEANKTKTTTPAPGKTDLLPVQR--PILPPVMPSKNRNMCCKIFCWVL 58

Query: 61  SILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPN 120
           S+LVL +I L     ++Y VF PKLP+Y V+SLR+ +L +NLDL+L A+F V+ITA NPN
Sbjct: 59  SLLVLAMIALGIAVTVVYFVFHPKLPRYEVNSLRVTNLGINLDLSLSAEFRVEITARNPN 118

Query: 121 KKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQE 180
           KKIGIYYEKGG + VW ++ KLCEG +P+FYQGH+NVTKL+V LTG+ QYG+T++ A+Q+
Sbjct: 119 KKIGIYYEKGGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVGLTGRAQYGNTVLAALQQ 178

Query: 181 QQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNCSFNLK 240
           QQQTGR+PLDLKVDAPVA+KLGKLK++K++ILG C LVVDSLS NN I+IKAS+CSF  K
Sbjct: 179 QQQTGRVPLDLKVDAPVAVKLGKLKMKKIRILGNCKLVVDSLSTNNNINIKASDCSFKAK 238

Query: 241 L 241
           L
Sbjct: 239 L 239

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576601|ref|XP_003556419.1| PREDICTED: uncharacterized protein LOC100780820 [Glycine max]

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 161/252 (63%), Positives = 190/252 (75%), Gaps = 13/252 (5%)

Query: 1   MADYQK--IHPVMDVEAAASTKEKGSSSHQQQNPPQRSIPVMHP---------NPPKKSR 49
           MAD+Q+  IHP M+ EA                  +R IP+ HP          P    R
Sbjct: 1   MADHQRLRIHP-MEGEAPPPPPTTPLVPPGSSKSEKR-IPLHHPPQLRAMPAAYPTAHKR 58

Query: 50  SCFCKCFCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQ 109
           SC CKC CW +++LVLLLIILAA  GILYLVF+PKLP YSVD+LRI DLRLN D++LYA+
Sbjct: 59  SCCCKCICWIITLLVLLLIILAASVGILYLVFKPKLPDYSVDTLRISDLRLNFDMSLYAR 118

Query: 110 FDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQ 169
           FDVKITA NPNKKIGIYY+KGG+LSVW    +LCEG LP+FYQGH+N T L+V+L+GQ Q
Sbjct: 119 FDVKITATNPNKKIGIYYKKGGRLSVWYTNTRLCEGSLPQFYQGHENKTMLNVSLSGQVQ 178

Query: 170 YGSTLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKIS 229
            GSTLM A+Q+QQQTGRIPLDLKV AP+AIKLG+LKL KV++LG+CLLVVDSLS+NN IS
Sbjct: 179 SGSTLMNALQQQQQTGRIPLDLKVHAPIAIKLGRLKLMKVRVLGECLLVVDSLSSNNLIS 238

Query: 230 IKASNCSFNLKL 241
           IKASNC F LKL
Sbjct: 239 IKASNCKFRLKL 250

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225466173|ref|XP_002263161.1| PREDICTED: uncharacterized protein LOC100244374 [Vitis vinifera] gi|296083806|emb|CBI24023.3| unnamed protein product [Vitis vinifera]

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 146/251 (58%), Positives = 175/251 (69%), Gaps = 10/251 (3%)

Query: 1   MADYQKIHPVMDVEAA----------ASTKEKGSSSHQQQNPPQRSIPVMHPNPPKKSRS 50
           MAD Q+IHP  D EA            ++K   S   +Q  P QR+IPVMH  PPKK RS
Sbjct: 1   MADPQRIHPAQDPEAPHTPTAPLVPRGASKSDRSDPTEQYPPFQRTIPVMHSKPPKKKRS 60

Query: 51  CFCKCFCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQF 110
           C CKCFCWT+S+L+LL++I+A +  IL+LVF+PKLPKYS+D LRI  L L  D +L A F
Sbjct: 61  CLCKCFCWTISLLLLLIVIIAIVVAILFLVFKPKLPKYSIDGLRITQLSLGSDDSLSATF 120

Query: 111 DVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQY 170
           DV ITA NPN KIGIYYE G  ++V+    +LCEG LPKFYQGHQN T L V LTGQTQ 
Sbjct: 121 DVNITARNPNTKIGIYYEGGSSITVFYTGTQLCEGSLPKFYQGHQNTTVLTVELTGQTQN 180

Query: 171 GSTLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISI 230
            + L+  +QEQ++TG IPL LKV  PV IKLGKLKL K+K    C LVVD+L ANN ISI
Sbjct: 181 ATGLLTTLQEQRETGSIPLTLKVKQPVRIKLGKLKLMKMKFRATCNLVVDNLDANNTISI 240

Query: 231 KASNCSFNLKL 241
           K+S+C F LKL
Sbjct: 241 KSSSCKFRLKL 251

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15221846|ref|NP_175856.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|4585996|gb|AAD25632.1|AC005287_34 Hypothetical protein [Arabidopsis thaliana] gi|49660077|gb|AAT68329.1| hypothetical protein At1g54540 [Arabidopsis thaliana] gi|50058921|gb|AAT69205.1| hypothetical protein At1g54540 [Arabidopsis thaliana] gi|332194995|gb|AEE33116.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana]

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 143/241 (59%), Positives = 183/241 (75%), Gaps = 2/241 (0%)

Query: 1   MADYQKIHPVMDVEAAASTKEKGSSSHQQQNPPQRSIPVMHPNPPKKSRSCFCKCFCWTV 60
           M D QKIHPV+ +EA  +     +       P QR IP   P  P K+R+  CK FCW +
Sbjct: 1   MGDQQKIHPVLQMEANKTKTTTPAPGKTVLLPVQRPIP--PPVIPSKNRNMCCKIFCWVL 58

Query: 61  SILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPN 120
           S+LV+ LI LA    ++Y VF PKLP Y V+SLR+ +L +NLDL+L A+F V+ITA NPN
Sbjct: 59  SLLVIALIALAIAVAVVYFVFHPKLPSYEVNSLRVTNLGINLDLSLSAEFKVEITARNPN 118

Query: 121 KKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQE 180
           +KIGIYYEKGG + VW ++ KLCEG +P+FYQGH+NVTKL+VALTG+ QYG+T++ A+Q+
Sbjct: 119 EKIGIYYEKGGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVALTGRAQYGNTVLAALQQ 178

Query: 181 QQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNCSFNLK 240
           QQQTGR+PLDLKV+APVAIKLG LK++K++ILG C LVVDSLS NN I+IKAS+CSF  K
Sbjct: 179 QQQTGRVPLDLKVNAPVAIKLGNLKMKKIRILGSCKLVVDSLSTNNNINIKASDCSFKAK 238

Query: 241 L 241
           L
Sbjct: 239 L 239

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356569943|ref|XP_003553153.1| PREDICTED: protein NDR1-like [Glycine max]

 Score =  243 bits (621), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/241 (56%), Positives = 166/241 (68%), Gaps = 1/241 (0%)

Query: 2   ADYQKIHPVMDVEAAASTKEKGSSSHQQQNPPQRSIPVMHPNPPKKSRSCFCKCFCWTVS 61
           AD Q+IHPV DVEA        + +   +  PQR+ PVMH  PPK+ RSC C+  CWT+S
Sbjct: 4   ADQQRIHPVHDVEAPHRPLVPENYAKSDKGIPQRTFPVMHSKPPKRRRSCCCRFMCWTLS 63

Query: 62  ILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNK 121
           IL++L+I +A   GILYLVF+PKLPKYSVD LRI    ++ + TLYA F+V ITA NPNK
Sbjct: 64  ILLILIIAIAITIGILYLVFRPKLPKYSVDQLRISQFNVSDNNTLYATFNVAITARNPNK 123

Query: 122 KIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQEQ 181
           KIGIYYE G  +S W    KLCEG LPKFYQGH+N T LD+ LTGQ    S L+  IQEQ
Sbjct: 124 KIGIYYEGGSHISAWYMDTKLCEGSLPKFYQGHRNTTVLDLPLTGQAPDASGLVNRIQEQ 183

Query: 182 -QQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNCSFNLK 240
            QQT  +PL+LKV+ PV +K GKLKL KVK   +C L VD+  A+N I I +S+C F L+
Sbjct: 184 LQQTNNVPLNLKVNQPVRVKFGKLKLFKVKFRVRCRLEVDNFGASNDIRISSSSCKFKLR 243

Query: 241 L 241
           L
Sbjct: 244 L 244

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	241
TAIR|locus:2020163	239	AT1G54540 "AT1G54540" [Arabido	0.991	1.0	0.456	4.6e-50
TAIR|locus:2018531	252	AT1G65690 "AT1G65690" [Arabido	0.987	0.944	0.364	4.6e-34
TAIR|locus:2167489	248	NHL25 "AT5G36970" [Arabidopsis	1.0	0.971	0.354	6.7e-33
TAIR|locus:2178993	281	AT5G21130 "AT5G21130" [Arabido	0.659	0.565	0.253	1.6e-12
TAIR|locus:2059274	260	AT2G27080 "AT2G27080" [Arabido	0.659	0.611	0.259	1.9e-12

TAIR|locus:2020163 AT1G54540 "AT1G54540" [Arabidopsis thaliana (taxid:3702)]

 Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
 Identities = 110/241 (45%), Positives = 138/241 (57%)

Query:     1 MADYQKIHPVMDVEAAASTKEKGSSSHQQQNPPQRSIPVMHPNPPXXXXXXXXXXXXWTV 60
             M D QKIHPV+ +EA  +     +       P QR IP   P  P            W +
Sbjct:     1 MGDQQKIHPVLQMEANKTKTTTPAPGKTVLLPVQRPIPP--PVIPSKNRNMCCKIFCWVL 58

Query:    61 SXXXXXXXXXXXXXXXXXXXFQPKLPKYSVXXXXXXXXXXXXXXXXYAQFDVKITANNPN 120
             S                   F PKLP Y V                 A+F V+ITA NPN
Sbjct:    59 SLLVIALIALAIAVAVVYFVFHPKLPSYEVNSLRVTNLGINLDLSLSAEFKVEITARNPN 118

Query:   121 XXXXXXXXXXXXLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQE 180
                         + VW ++ KLCEG +P+FYQGH+NVTKL+VALTG+ QYG+T++ A+Q+
Sbjct:   119 EKIGIYYEKGGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVALTGRAQYGNTVLAALQQ 178

Query:   181 QQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNCSFNLK 240
             QQQTGR+PLDLKV+APVAIKLG LK++K++ILG C LVVDSLS NN I+IKAS+CSF  K
Sbjct:   179 QQQTGRVPLDLKVNAPVAIKLGNLKMKKIRILGSCKLVVDSLSTNNNINIKASDCSFKAK 238

Query:   241 L 241
             L
Sbjct:   239 L 239

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2018531 AT1G65690 "AT1G65690" [Arabidopsis thaliana (taxid:3702)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 93/255 (36%), Positives = 126/255 (49%)

Query:     1 MADYQKIHPVMDVEAA-----ASTKEKGSSSHQQQNP--------PQRSIPVMHPNPPXX 47
             M+ +QKI+PV D EAA     A    +GSS  +  +P        PQR +P+    PP  
Sbjct:     1 MSQHQKIYPVQDPEAATARPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLA---PPKK 57

Query:    48 XXXXXXXXXXWTVSXXXXXXXXXXXXXXXXXXXFQPKLPKYSVXXXXXXXXXXXXXXXXY 107
                       +T                     F+PKLP YS+                 
Sbjct:    58 RRSCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLT 117

Query:   108 AQFDVKITANNPNXXXXXXXXXXXXLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQ 167
               F+V ITA NPN            ++VW    +L  G LPKFYQGH+N T + V +TGQ
Sbjct:   118 TAFNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQ 177

Query:   168 TQYGSTLMKAIQEQQQ-TGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANN 226
             TQ  S L   ++EQQQ TG IPL ++V+ PV +K GKLKL +V+ L +C + VDSL+ NN
Sbjct:   178 TQNASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNN 237

Query:   227 KISIKASNCSFNLKL 241
              I I++S+C F L+L
Sbjct:   238 VIKIQSSSCKFRLRL 252

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006865 "amino acid transport" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2167489 NHL25 "AT5G36970" [Arabidopsis thaliana (taxid:3702)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 88/248 (35%), Positives = 125/248 (50%)

Query:     1 MADYQKIHPVMDVEA----AASTKEKGSSSHQQQNPP--QRSIPVMHPNPPXXXXXXXXX 54
             M+D+QKIHPV D EA     A    +GSS  +  +P   Q++ P+  P            
Sbjct:     1 MSDHQKIHPVSDPEAPPHPTAPLVPRGSSRSEHGDPTKTQQAAPLDPPREKKGSRSCWCR 60

Query:    55 XXXWTVSXXXXXXXXXXXXXXXXXXXFQPKLPKYSVXXXXXXXXXXXXXXXXYAQFDVKI 114
                +T+                    F+PK P Y++                   F+V I
Sbjct:    61 CVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQDLSLSTAFNVTI 120

Query:   115 TANNPNXXXXXXXXXXXXLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTL 174
             TA NPN            +SV   + ++  G LPKFYQGH+N T + V +TG TQ  ++L
Sbjct:   121 TAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTIILVEMTGFTQNATSL 180

Query:   175 MKAIQEQQQ-TGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIKAS 233
             M  +QEQQ+ TG IPL ++V  PV IKLGKLKL KV+ L +C + VDSL+AN+ I +++S
Sbjct:   181 MTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCGVSVDSLAANSVIRVRSS 240

Query:   234 NCSFNLKL 241
             NC +  +L
Sbjct:   241 NCKYRFRL 248

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0009814 "defense response, incompatible interaction" evidence=IEP

GO:0009863 "salicylic acid mediated signaling pathway" evidence=IEP

TAIR|locus:2178993 AT5G21130 "AT5G21130" [Arabidopsis thaliana (taxid:3702)]

 Score = 146 (56.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
 Identities = 41/162 (25%), Positives = 66/162 (40%)

Query:    81 FQPKLPKYSVXXXXXXXXXXXXXXXXYAQFDVKITANNPNXXXXXXXXXXXXLSVWDERA 140
             +QP  P++SV                     +K+ + N                V+    
Sbjct:   121 YQPHKPQFSVSGVSVTGINLTSSSPFSPVIRIKLRSQNVKGKLGLIYEKGNEADVFFNGT 180

Query:   141 KLCEGFLPKFYQGHQNVTKLDVALTGQT-QYGSTLMKAIQEQQQTGRIPLDLKVDAPVAI 199
             KL  G    F Q   NVT +   L G + +  S+  K + E Q+ G++P  L++ APV  
Sbjct:   181 KLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELTESQKKGKVPFGLRIKAPVKF 240

Query:   200 KLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNCSFNLKL 241
             K+G +    + I   C + VD L+A+   ++K  NC   L L
Sbjct:   241 KVGSVTTWTMTITVDCKITVDKLTAS--ATVKTENCETGLSL 280

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2059274 AT2G27080 "AT2G27080" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 42/162 (25%), Positives = 74/162 (45%)

Query:    81 FQPKLPKYSVXXXXXXXXXXXXXXXXYAQFDVKITANNPNXXXXXXXXXXXXLSVWDERA 140
             ++P+ PKYS+                   F+V + + N N            + V+    
Sbjct:   100 YRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDV 159

Query:   141 KLCEGFLPKFYQGHQNVTKLDVALTG-QTQYGSTLMKAIQEQQQTGRIPLDLKVDAPVAI 199
              +  G +P FYQ  +NVT + + L+G + Q  S + K ++ +     +P  LK+ APV I
Sbjct:   160 DISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKI 219

Query:   200 KLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNCSFNLKL 241
             K G +K   + +   C + VD L+A ++I  +   CS ++ L
Sbjct:   220 KFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSR--KCSHDVDL 259


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.130   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      241       182   0.00098  109 3  11 22  0.46    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  153 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.86u 0.10s 14.96t   Elapsed:  00:00:01
  Total cpu time:  14.86u 0.10s 14.96t   Elapsed:  00:00:01
  Start:  Sat May 11 05:18:11 2013   End:  Sat May 11 05:18:12 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	241
pfam03168	98	pfam03168, LEA_2, Late embryogenesis abundant prot	0.004

>gnl|CDD|217400 pfam03168, LEA_2, Late embryogenesis abundant protein

 Score = 35.4 bits (82), Expect = 0.004
 Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 9/100 (9%)

Query: 113 KITANNPNKKIGIYYEKGGKLSVWDERAKLCEG-FLPKFYQGHQNVTKLDVALTGQTQYG 171
            +   NPN    + Y  G    +     +L  G             T L+V +T      
Sbjct: 1   TLRVRNPNS-FPLPY-DGLSYDLSYNGQELASGTSPQPGTVPAGGTTTLEVPVT------ 52

Query: 172 STLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKI 211
            +L    +  +    + L+L       +K+G        +
Sbjct: 53  VSLDDLARLLKDLLAVGLELPYTLRGRLKVGGPVKGSRTV 92

Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511, pfam07427, has now been merged into this family. Length = 98

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	241
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.45
smart00769	100	WHy Water Stress and Hypersensitive response.	98.48
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	97.88
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	97.79
COG5608	161	LEA14-like dessication related protein [Defense me	97.25
PLN03160	219	uncharacterized protein; Provisional	95.96
TIGR03602	56	streptolysinS bacteriocin protoxin, streptolysin S	91.03
TIGR02588	122	conserved hypothetical protein TIGR02588. The func	90.76
COG1580	159	FliL Flagellar basal body-associated protein [Cell	82.88

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=9.3e-40  Score=279.00  Aligned_cols=214  Identities=15%  Similarity=0.236  Sum_probs=168.8

Q ss_pred             CCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCceehhhHHHHHHHHHHHHHHHHHHhheeee
Q 047356            1 MADYQKIHPVMDVEAAASTKEKGSSSHQQQNPPQRSIPVMHPNPPKKSRSCFCKCFCWTVSILVLLLIILAAIGGILYLV   80 (241)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~rr~~ccr~~~~~~~~ll~lill~gi~~~il~lv   80 (241)
                      |++.+..-|. -+.++.-+||..+  +.             +...++||++||+||+|+++++++   ++++++.++|++
T Consensus         1 ~~~~~~~~p~-a~~~~~~~~d~~~--~~-------------~~~~~~~r~~~~~c~~~~~a~~l~---l~~v~~~l~~~v   61 (219)
T PLN03160          1 MAETEQVRPL-APAAFRLRSDEEE--AT-------------NHLKKTRRRNCIKCCGCITATLLI---LATTILVLVFTV   61 (219)
T ss_pred             CCccccCCCC-CCCcccccCchhh--cC-------------cchhccccccceEEHHHHHHHHHH---HHHHHHheeeEE
Confidence            7777777673 2333335665433  11             111223455666666666655443   366677778999


Q ss_pred             eeCCCCEEEEeeeEEeeeecCC----CceeEEEEEEEEEEeCCCceeEEEECCCcEEEEEeCceeeeeccCcceeecCCC
Q 047356           81 FQPKLPKYSVDSLRIRDLRLNL----DLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQN  156 (241)
Q Consensus        81 ~rPk~P~f~V~s~~v~~f~~~~----~~~l~~~~~~~l~~~NPN~k~~i~Y~~~~~v~v~Y~g~~Lg~~~vp~f~q~~r~  156 (241)
                      ||||.|+|+|+++++++|++++    +..+|++++++++++|||. ++|+|++. ++.++|+|+.+|++.+|+|+|++++
T Consensus        62 frPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~~~~Y~~~-~~~v~Y~g~~vG~a~~p~g~~~ar~  139 (219)
T PLN03160         62 FRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-ASFKYSNT-TTTIYYGGTVVGEARTPPGKAKARR  139 (219)
T ss_pred             EEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-eeEEEcCe-EEEEEECCEEEEEEEcCCcccCCCC
Confidence            9999999999999999999875    3467888999999999997 99999986 6999999999999999999999999


Q ss_pred             eEEEEEEEEEee-ccChhHHHHHHHHhcCCeEEEEEEEEEEEEEEEeEEEEeeEEEEEEeEEEEecCCCCceeeeeccCc
Q 047356          157 VTKLDVALTGQT-QYGSTLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNC  235 (241)
Q Consensus       157 tt~v~~~l~g~~-~~~~~~~~~l~~d~~~G~V~l~v~v~~~vr~kvg~~~~~~~~v~V~C~l~v~~~~~~~~~~i~~~~C  235 (241)
                      ++.+++++.... .+.+  ...|.+|..+|.++|++++++++++++|++.+++++++++|++.++..    ...+++++|
T Consensus       140 T~~l~~tv~~~~~~~~~--~~~L~~D~~~G~v~l~~~~~v~gkVkv~~i~k~~v~~~v~C~v~V~~~----~~~i~~~~C  213 (219)
T PLN03160        140 TMRMNVTVDIIPDKILS--VPGLLTDISSGLLNMNSYTRIGGKVKILKIIKKHVVVKMNCTMTVNIT----SQAIQGQKC  213 (219)
T ss_pred             eEEEEEEEEEEeceecc--chhHHHHhhCCeEEEEEEEEEEEEEEEEEEEEEEEEEEEEeEEEEECC----CCEEeccEe
Confidence            999999876652 2222  256899999999999999999999999999999999999999999753    247899999


Q ss_pred             EEEecC
Q 047356          236 SFNLKL  241 (241)
Q Consensus       236 ~~~~~l  241 (241)
                      +.+++|
T Consensus       214 ~~~~~~  219 (219)
T PLN03160        214 KRHVDL  219 (219)
T ss_pred             cccccC
Confidence            999876

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.45  E-value=6.5e-13  Score=98.99  Aligned_cols=98  Identities=23%  Similarity=0.421  Sum_probs=73.6

Q ss_pred             EEEEeCCCceeEEEECCCcEEEEEeCceeee-eccCcceeecCCCeEEEEEEEEEeeccChhHHHHHHHHhcCCeEEEEE
Q 047356          113 KITANNPNKKIGIYYEKGGKLSVWDERAKLC-EGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQEQQQTGRIPLDL  191 (241)
Q Consensus       113 ~l~~~NPN~k~~i~Y~~~~~v~v~Y~g~~Lg-~~~vp~f~q~~r~tt~v~~~l~g~~~~~~~~~~~l~~d~~~G~V~l~v  191 (241)
                      +|+++|||. ++++|++. +++++|+|..+| ....++|+|++++++.+.+.++...   ..+...+.++. +|..++++
T Consensus         1 ~l~v~NPN~-~~i~~~~~-~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~---~~l~~~l~~~~-~~~~~~~v   74 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRYDSI-EYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDY---SDLPRLLKDLL-AGRVPFDV   74 (101)
T ss_dssp             EEEEEESSS-S-EEEEEE-EEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEH---HHHHHHHHHHH-HTTSCEEE
T ss_pred             CEEEECCCc-eeEEEeCE-EEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcH---HHHHHHHHhhh-ccccceEE
Confidence            689999998 99999998 699999999999 7789999999999999888776662   22356667777 77888888


Q ss_pred             EEEEEEEEEE-eEEEEeeEEEEEEeE
Q 047356          192 KVDAPVAIKL-GKLKLRKVKILGQCL  216 (241)
Q Consensus       192 ~v~~~vr~kv-g~~~~~~~~v~V~C~  216 (241)
                      .+++++++++ +.....+..+.++|+
T Consensus        75 ~~~~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   75 TYRIRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             EEEEEEEEEEcccceeeeEEEeEEeE
Confidence            8888888884 433333445555554

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.48  E-value=3.3e-06  Score=63.39  Aligned_cols=88  Identities=23%  Similarity=0.191  Sum_probs=65.9

Q ss_pred             cCCCceeEEEEEEEEEEeCCCceeEEEECCCcEEEEEeCceeeeeccCc-ceeecCCCeEEEEEEEEEeeccChhHHHHH
Q 047356          100 LNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLP-KFYQGHQNVTKLDVALTGQTQYGSTLMKAI  178 (241)
Q Consensus       100 ~~~~~~l~~~~~~~l~~~NPN~k~~i~Y~~~~~v~v~Y~g~~Lg~~~vp-~f~q~~r~tt~v~~~l~g~~~~~~~~~~~l  178 (241)
                      ......++.++.+++.+.|||. +.+.|++. +..++|+|..+|++..+ ++..++++++.+.++++....    ....+
T Consensus         7 ~~~~~~~~~~~~l~l~v~NPN~-~~l~~~~~-~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~~~----~~~~~   80 (100)
T smart00769        7 WGPVSGLEIEIVLKVKVQNPNP-FPIPVNGL-SYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVNLF----LAEAL   80 (100)
T ss_pred             eccccceEEEEEEEEEEECCCC-CccccccE-EEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEeehh----HhHHH
Confidence            3334467899999999999995 99999997 58999999999999986 799999999998888766421    22444


Q ss_pred             HHHhcCCe-EEEEEEE
Q 047356          179 QEQQQTGR-IPLDLKV  193 (241)
Q Consensus       179 ~~d~~~G~-V~l~v~v  193 (241)
                      ..++.+|. ++++++.
T Consensus        81 ~~~l~~~~~~~y~l~g   96 (100)
T smart00769       81 IWHIANGEEIPYRLDG   96 (100)
T ss_pred             HHhhccCCCccEEEEE
Confidence            55555443 4444433

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=97.88  E-value=0.00048  Score=59.31  Aligned_cols=83  Identities=12%  Similarity=0.138  Sum_probs=60.8

Q ss_pred             CCCCEEEEeeeEEeeeecCC-CceeEEEEEEEEEEeCCCceeEEEECCCcEEEEEeCceeeeeccCcce-eecCCCeEEE
Q 047356           83 PKLPKYSVDSLRIRDLRLNL-DLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKF-YQGHQNVTKL  160 (241)
Q Consensus        83 Pk~P~f~V~s~~v~~f~~~~-~~~l~~~~~~~l~~~NPN~k~~i~Y~~~~~v~v~Y~g~~Lg~~~vp~f-~q~~r~tt~v  160 (241)
                      |+.-.++-.++......++. ...+..++.-.|.+.||| ...+.-.+. .+++.|....+|.+..... ..++++.+.+
T Consensus        98 PRsV~v~~~gv~s~~V~f~~~~~~v~l~itn~lNIsN~N-Fy~V~Vt~~-s~qv~~~~~VVG~~~~~~~~~I~Prs~~q~  175 (238)
T PF07092_consen   98 PRSVTVSPVGVKSVTVSFNPDKSTVQLNITNTLNISNPN-FYPVTVTNL-SIQVLYMKTVVGKGKNSNITVIGPRSSKQV  175 (238)
T ss_pred             CcEEEEecCcEEEEEEEEeCCCCEEEEEEEEEEEccCCC-EEEEEEEeE-EEEEEEEEeEEeeeEecceEEecccCCceE
Confidence            77555554444444444443 356788889999999999 699999997 5999999999999987654 5678877766


Q ss_pred             EEEEEEe
Q 047356          161 DVALTGQ  167 (241)
Q Consensus       161 ~~~l~g~  167 (241)
                      ..++...
T Consensus       176 ~~tV~t~  182 (238)
T PF07092_consen  176 NYTVKTT  182 (238)
T ss_pred             EEEeeEE
Confidence            6665544

The function of this family is unknown.

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=97.79  E-value=0.00015  Score=66.19  Aligned_cols=87  Identities=23%  Similarity=0.329  Sum_probs=54.3

Q ss_pred             CCCCceehhhHHHHHHHHHHHHHHHHHHhheeeeeeCCCCEEEEeeeEEeeeecCCCceeEEEEEEEEEEeCCCceeEEE
Q 047356           47 KSRSCFCKCFCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIY  126 (241)
Q Consensus        47 ~rr~~ccr~~~~~~~~ll~lill~gi~~~il~lv~rPk~P~f~V~s~~v~~f~~~~~~~l~~~~~~~l~~~NPN~k~~i~  126 (241)
                      ++|++|.|..+|+++.+++|+++.|+++|+| ..-+|   --.|+=..+++.-.+   .--.-|++++.+.||| .+.|.
T Consensus       294 r~r~~~~r~~~c~~~~i~~lL~ig~~~gFv~-AttKp---L~~v~v~~I~NVlaS---~qELmfdl~V~A~NPn-~~~V~  365 (387)
T PF12751_consen  294 RQRSWFSRFASCIYLSILLLLVIGFAIGFVF-ATTKP---LTDVQVVSIQNVLAS---EQELMFDLTVEAFNPN-WFTVT  365 (387)
T ss_pred             ccccHHhhhhHHHHHHHHHHHHHHHHHHhhh-hcCcc---cccceEEEeeeeeec---cceEEEeeEEEEECCC-eEEEE
Confidence            4556777777777766666655555555554 34444   222222233332222   2346789999999999 59999


Q ss_pred             ECCCcEEEEEeCceee
Q 047356          127 YEKGGKLSVWDERAKL  142 (241)
Q Consensus       127 Y~~~~~v~v~Y~g~~L  142 (241)
                      .++. .++||-+..-+
T Consensus       366 I~d~-dldIFAKS~yv  380 (387)
T PF12751_consen  366 IDDM-DLDIFAKSRYV  380 (387)
T ss_pred             eccc-eeeeEecCCcc
Confidence            9998 59998654333

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=97.25  E-value=0.041  Score=44.27  Aligned_cols=116  Identities=16%  Similarity=0.146  Sum_probs=75.8

Q ss_pred             CCCEEEEeeeEEeeeecCCCceeEEEEEEEEEEeCCCceeEEEECCCcEEEEEeCceeeeeccC-cceeecCCCeEEEEE
Q 047356           84 KLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFL-PKFYQGHQNVTKLDV  162 (241)
Q Consensus        84 k~P~f~V~s~~v~~f~~~~~~~l~~~~~~~l~~~NPN~k~~i~Y~~~~~v~v~Y~g~~Lg~~~v-p~f~q~~r~tt~v~~  162 (241)
                      +.|...--.+..-....     ...++-.++.++|||. +.+-..+. +..++-+|..+|+|.. .++..++.+...+.+
T Consensus        31 ~~p~ve~~ka~wGkvt~-----s~~EiV~t~KiyNPN~-fPipVtgl-~y~vymN~Iki~eG~~~k~~~v~p~S~~tvdv  103 (161)
T COG5608          31 KKPGVESMKAKWGKVTN-----SETEIVGTLKIYNPNP-FPIPVTGL-QYAVYMNDIKIGEGEILKGTTVPPNSRETVDV  103 (161)
T ss_pred             CCCCceEEEEEEEEEec-----cceEEEEEEEecCCCC-cceeeece-EEEEEEcceEeeccccccceEECCCCeEEEEE
Confidence            44555544444443322     2468889999999995 99999888 5889999999999975 668889999888888


Q ss_pred             EEEEeeccChhHHHHHHHHhcCCeE-EEEEEEEEEEEEEEeEEEEeeEEEE
Q 047356          163 ALTGQTQYGSTLMKAIQEQQQTGRI-PLDLKVDAPVAIKLGKLKLRKVKIL  212 (241)
Q Consensus       163 ~l~g~~~~~~~~~~~l~~d~~~G~V-~l~v~v~~~vr~kvg~~~~~~~~v~  212 (241)
                      .+.-+.   +.....+...+.+|.= +.+++  .+..+++|+.. ..+.++
T Consensus       104 ~l~~d~---~~~ke~w~~hi~ngErs~Ir~~--i~~~v~vg~~d-~eVpi~  148 (161)
T COG5608         104 PLRLDN---SKIKEWWVTHIENGERSTIRVR--IKGVVKVGGMD-YEVPIK  148 (161)
T ss_pred             EEEEeh---HHHHHHHHHHhhccCcccEEEE--EEEEEEEccEE-EEEEEE
Confidence            775542   2334556667766653 33333  33444455443 334443

>PLN03160 uncharacterized protein; Provisional

Probab=95.96  E-value=0.07  Score=45.74  Aligned_cols=103  Identities=21%  Similarity=0.276  Sum_probs=57.4

Q ss_pred             CCCCCceehhhHHHHHHHHHHHHHHHHHHhheeeeeeCC--CCEEEEeeeEEee---eecCCCcee-------EEEEEEE
Q 047356           46 KKSRSCFCKCFCWTVSILVLLLIILAAIGGILYLVFQPK--LPKYSVDSLRIRD---LRLNLDLTL-------YAQFDVK  113 (241)
Q Consensus        46 k~rr~~ccr~~~~~~~~ll~lill~gi~~~il~lv~rPk--~P~f~V~s~~v~~---f~~~~~~~l-------~~~~~~~  113 (241)
                      ++++.+||+|+|-++.+|.++++   ++++++|=.-.|+  .-.++++++.++.   .+..-+.++       |.|. +.
T Consensus        33 r~~~~~c~~~~~a~~l~l~~v~~---~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~~  108 (219)
T PLN03160         33 RRNCIKCCGCITATLLILATTIL---VLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-AS  108 (219)
T ss_pred             cccceEEHHHHHHHHHHHHHHHH---heeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-ee
Confidence            46677778887777666666433   3334455567884  5667777776642   111111122       3444 34


Q ss_pred             EEEeCCCceeEEEECCCcEEEEEeCceeeeeccCcceeecCCCeEE
Q 047356          114 ITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTK  159 (241)
Q Consensus       114 l~~~NPN~k~~i~Y~~~~~v~v~Y~g~~Lg~~~vp~f~q~~r~tt~  159 (241)
                      +.-+  |..+.++|++. .+.    ...+..+.+++..+..-+.+.
T Consensus       109 ~~Y~--~~~~~v~Y~g~-~vG----~a~~p~g~~~ar~T~~l~~tv  147 (219)
T PLN03160        109 FKYS--NTTTTIYYGGT-VVG----EARTPPGKAKARRTMRMNVTV  147 (219)
T ss_pred             EEEc--CeEEEEEECCE-EEE----EEEcCCcccCCCCeEEEEEEE
Confidence            5554  34588999763 232    224555666766666666554

>TIGR03602 streptolysinS bacteriocin protoxin, streptolysin S family

Probab=91.03  E-value=0.018  Score=37.25  Aligned_cols=12  Identities=42%  Similarity=1.187  Sum_probs=7.3

Q ss_pred             CceehhhHHHHH
Q 047356           50 SCFCKCFCWTVS   61 (241)
Q Consensus        50 ~~ccr~~~~~~~   61 (241)
                      +|||||+||+++
T Consensus        25 gcccccc~cc~s   36 (56)
T TIGR03602        25 GCCCCCCCCCFS   36 (56)
T ss_pred             CeEEEeccEEEE
Confidence            577666666543

Members of this family are bacteriocin precursors. These small, ribosomally produced polypeptide precursors are extensively processed post-translationally. This family belongs to a class of heterocycle-containing bacteriocins, including streptolysin S from Streptococcus pyogenes, and related bacteriocins from Streptococcus iniae and Clostridium botulinum. Streptolysin S is hemolytic. Bacteriocin genes in general are small and highly diverse, with odd sequence composition, and are easily missed by many gene-finding programs.

>TIGR02588 conserved hypothetical protein TIGR02588

Probab=90.76  E-value=0.67  Score=36.01  Aligned_cols=51  Identities=20%  Similarity=0.216  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHhheeeee--eCCCCEEEEeeeEEeeeecCCCceeEEEEEEEEEEeCCCce
Q 047356           65 LLLIILAAIGGILYLVF--QPKLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKK  122 (241)
Q Consensus        65 ~lill~gi~~~il~lv~--rPk~P~f~V~s~~v~~f~~~~~~~l~~~~~~~l~~~NPN~k  122 (241)
                      .++++++++.+++|.++  +++.|.+++......+-       ....+-+-++++|-..+
T Consensus        11 s~~ill~viglv~y~~l~~~~~pp~l~v~~~~~~r~-------~~gqyyVpF~V~N~gg~   63 (122)
T TIGR02588        11 STLILAAMFGLVAYDWLRYSNKAAVLEVAPAEVERM-------QTGQYYVPFAIHNLGGT   63 (122)
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCCeEEEeehheeEE-------eCCEEEEEEEEEeCCCc
Confidence            34456777777777665  56889999888776542       23557778888887753

The function of this protein is unknown. It is always found as part of a two-gene operon with TIGR02587, a protein that appears to span the membrane seven times. It is found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus, so far, all of which are bacterial.

>COG1580 FliL Flagellar basal body-associated protein [Cell motility and secretion]

Probab=82.88  E-value=5.8  Score=32.35  Aligned_cols=26  Identities=23%  Similarity=0.499  Sum_probs=20.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHhheeeee
Q 047356           56 FCWTVSILVLLLIILAAIGGILYLVF   81 (241)
Q Consensus        56 ~~~~~~~ll~lill~gi~~~il~lv~   81 (241)
                      ..|++.+++++++++|+.+..+|+..
T Consensus        17 ~~~I~liv~ivl~~~a~~~~~~~~~~   42 (159)
T COG1580          17 SLWILLIVLIVLLALAGAGYFFWFGS   42 (159)
T ss_pred             eeehHHHHHHHHHHHHHHHHHHhhhc
Confidence            55888777777778888888888775

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	241
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 9e-06
 Identities = 38/171 (22%), Positives = 58/171 (33%), Gaps = 42/171 (24%)

Query: 83  PKLPKYSVDSLR-IRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKG-GK--LSVWDE 138
               KY+V  L+    LR  L L L            P K + I    G GK  ++    
Sbjct: 124 QVFAKYNVSRLQPYLKLRQAL-LEL-----------RPAKNVLIDGVLGSGKTWVA---- 167

Query: 139 RAKLC--EGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQEQQQTGRIPLDLKVDAP 196
              +C       K       +  L++          T+++ +Q+           + D  
Sbjct: 168 -LDVCLSYKVQCKMDFK---IFWLNL---KNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 197 VAIKL----GKLKLR---KVKILGQCLLVVDSLSANNKISIKASNCSFNLK 240
             IKL     + +LR   K K    CLLV+ ++  N K    A    FNL 
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ-NAKA-WNA----FNLS 265

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	241
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.23
1xo8_A	151	AT1G01470; structural genomics, protein structure	98.06
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	97.81

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.23  E-value=3.8e-06  Score=68.32  Aligned_cols=102  Identities=16%  Similarity=0.190  Sum_probs=77.1

Q ss_pred             CCCEEEEeeeEEeeeecCCCceeEEEEEEEEEEeCCCceeEEEECCCcEEEEEeCceeeeeccCcc-eeecCCCeEEEEE
Q 047356           84 KLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPK-FYQGHQNVTKLDV  162 (241)
Q Consensus        84 k~P~f~V~s~~v~~f~~~~~~~l~~~~~~~l~~~NPN~k~~i~Y~~~~~v~v~Y~g~~Lg~~~vp~-f~q~~r~tt~v~~  162 (241)
                      +.|++++.++++.+++..     .++|.+.++++|||. ..+.+.++ +..++-+|..+++|..+. +..++.+++.+.+
T Consensus        43 ~~PeV~v~~v~~~~~~l~-----~~~~~l~LrV~NPN~-~pLpi~gi-~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~V  115 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRD-----GVDYHAKVSVKNPYS-QSIPICQI-SYILKSATRTIASGTIPDPGSLVGSGTTVLDV  115 (174)
T ss_dssp             CCCEEEEEEEEEEEECSS-----SEEEEEEEEEEECSS-SCCBCCSE-EEEEEESSSCEEEEEESCCCBCCSSEEEEEEE
T ss_pred             CCCEEEEEEeEEeccccc-----eEEEEEEEEEECCCC-CCccccce-EEEEEECCEEEEEEecCCCceECCCCcEEEEE
Confidence            679999999999988766     388999999999995 99999998 588999999999998865 7788999999888


Q ss_pred             EEEEeeccChhHHHHHHHHh-cCCeEEEEEEEEEE
Q 047356          163 ALTGQTQYGSTLMKAIQEQQ-QTGRIPLDLKVDAP  196 (241)
Q Consensus       163 ~l~g~~~~~~~~~~~l~~d~-~~G~V~l~v~v~~~  196 (241)
                      .++...   .+ ...+..++ ..+.++.++++...
T Consensus       116 pv~v~~---~~-l~~~~~~l~~~~~i~Y~L~g~L~  146 (174)
T 1yyc_A          116 PVKVAY---SI-AVSLMKDMCTDWDIDYQLDIGLT  146 (174)
T ss_dssp             EEEESH---HH-HHHTCCCCCSSEEECEEEEEEEE
T ss_pred             EEEEEH---HH-HHHHHHhcCCCCccceEEEEEEE
Confidence            876541   11 11222233 23456666655443

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=98.06  E-value=5.3e-06  Score=65.96  Aligned_cols=103  Identities=17%  Similarity=0.240  Sum_probs=76.1

Q ss_pred             CCCEEEEeeeEEeeeecCCCceeEEEEEEEEEEeCCCceeEEEECCCcEEEEEeCceeeeeccCcc-eeecCCCeEEEEE
Q 047356           84 KLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPK-FYQGHQNVTKLDV  162 (241)
Q Consensus        84 k~P~f~V~s~~v~~f~~~~~~~l~~~~~~~l~~~NPN~k~~i~Y~~~~~v~v~Y~g~~Lg~~~vp~-f~q~~r~tt~v~~  162 (241)
                      +.|++++.++++.+++..     ..+|.+.++++|||. ..+.+.+. +..++-+|..+++|..+. +..++.+++.+.+
T Consensus        20 ~~P~v~v~~v~~~~~~~~-----~~~~~~~l~V~NPN~-~~lpi~gi-~y~l~vng~~lasG~~~~~~~ipa~g~~~v~v   92 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNRD-----SVEYLAKVSVTNPYS-HSIPICEI-SFTFHSAGREIGKGKIPDPGSLKAKDMTALDI   92 (151)
T ss_dssp             CSCCCBCSEEEECCCTTT-----EECEEEEEEEECSSS-SCCCCEEE-EEEEESSSSCEEEEEEEECCCCSSSSEEEEEE
T ss_pred             CCCEEEEEEeEEeccCcc-----eeEEEEEEEEECCCC-CCcccccE-EEEEEECCEEEEEEecCCCcEECCCCcEEEEE
Confidence            579999999998876654     478999999999996 99999988 488888999999998865 7788999998888


Q ss_pred             EEEEeeccChhHHHHHHHHh-cCCeEEEEEEEEEEE
Q 047356          163 ALTGQTQYGSTLMKAIQEQQ-QTGRIPLDLKVDAPV  197 (241)
Q Consensus       163 ~l~g~~~~~~~~~~~l~~d~-~~G~V~l~v~v~~~v  197 (241)
                      .++...   ..+ ..+..++ ..+.++.+++++..+
T Consensus        93 pv~v~~---~~l-~~~~~~l~~~~~i~Y~l~g~l~i  124 (151)
T 1xo8_A           93 PVVVPY---SIL-FNLARDVGVDWDIDYELQIGLTI  124 (151)
T ss_dssp             CCCEEH---HHH-HHHHHHHHHHSEEEEEEEEEEEE
T ss_pred             EEEEEH---HHH-HHHHHhcccCCcccEEEEEEEEE
Confidence            776552   112 2222232 346777766555543

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=97.81  E-value=0.00029  Score=54.89  Aligned_cols=89  Identities=11%  Similarity=0.116  Sum_probs=63.8

Q ss_pred             EEEEEEEEEEeCCCceeEEEECCCcEEEEEeCceeeeecc-CcceeecCCCeEEEEEEEEEe-eccChhHHHHHHHHhcC
Q 047356          107 YAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGF-LPKFYQGHQNVTKLDVALTGQ-TQYGSTLMKAIQEQQQT  184 (241)
Q Consensus       107 ~~~~~~~l~~~NPN~k~~i~Y~~~~~v~v~Y~g~~Lg~~~-vp~f~q~~r~tt~v~~~l~g~-~~~~~~~~~~l~~d~~~  184 (241)
                      .+.|.+.+++.|||. +.+.++.. +..++.+|..+|+|. ...+..++.+++.+.+.+.-+ -.+.+    .+.+.+.+
T Consensus        17 ~t~~~~~l~V~NPN~-~~l~i~gl-~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~----~~~~hi~n   90 (136)
T 3but_A           17 QTEIVALAKVRNEDV-VPIVVSGY-HYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLRE----WWVTHIAN   90 (136)
T ss_dssp             EEEEEEEEEEECCSS-SCEEEEEE-EEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTT----HHHHHHHT
T ss_pred             EEEEEEEEEEeCCCC-cceeeece-EEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHH----HHHHHhhc
Confidence            678999999999995 99999987 589999999999987 577889999988888887766 23333    34444444


Q ss_pred             C-eEEEEEEEEEEEEEEEeE
Q 047356          185 G-RIPLDLKVDAPVAIKLGK  203 (241)
Q Consensus       185 G-~V~l~v~v~~~vr~kvg~  203 (241)
                      | .-.++++  +++++.+++
T Consensus        91 ge~s~l~i~--~~~~l~v~g  108 (136)
T 3but_A           91 GEKTKIRVA--IKPTIEIGG  108 (136)
T ss_dssp             TSEEEEEEE--EEEEEECC-
T ss_pred             CCceEEEEE--EEEEEEeCC
Confidence            4 3333333  344445443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	241
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.25

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.25  E-value=6e-07  Score=69.60  Aligned_cols=105  Identities=16%  Similarity=0.245  Sum_probs=77.1

Q ss_pred             eCCCCEEEEeeeEEeeeecCCCceeEEEEEEEEEEeCCCceeEEEECCCcEEEEEeCceeeeeccCcc-eeecCCCeEEE
Q 047356           82 QPKLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPK-FYQGHQNVTKL  160 (241)
Q Consensus        82 rPk~P~f~V~s~~v~~f~~~~~~~l~~~~~~~l~~~NPN~k~~i~Y~~~~~v~v~Y~g~~Lg~~~vp~-f~q~~r~tt~v  160 (241)
                      +=+.|++++.++++.+++..     .+++.+++++.|||. +++...+. +.+++.+|..+++|..+. +..++++++.+
T Consensus        18 ~~~kPev~l~~v~i~~v~~~-----~~~l~~~l~V~NPN~-~~l~i~~l-~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v   90 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNRD-----SVEYLAKVSVTNPYS-HSIPICEI-SFTFHSAGREIGKGKIPDPGSLKAKDMTAL   90 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTTT-----EECEEEEEEEECSSS-SCCCCEEE-EEEEESSSSCEEEEEEEECCCCSSSSEEEE
T ss_pred             CCCCCeEEEEEEEeeecccc-----eEEEEEEEEEECCCC-CceeeeeE-EEEEEECCEEEEeEecCCCcEEcCCCcEEE
Confidence            34579999999999887765     578999999999995 89999988 589999999999998865 67788999998


Q ss_pred             EEEEEEeeccChhHHHHHHHHh-cCCeEEEEEEEEEEE
Q 047356          161 DVALTGQTQYGSTLMKAIQEQQ-QTGRIPLDLKVDAPV  197 (241)
Q Consensus       161 ~~~l~g~~~~~~~~~~~l~~d~-~~G~V~l~v~v~~~v  197 (241)
                      .+.++...   .++.. +..++ +.+.++.++++...+
T Consensus        91 ~vpv~v~~---~~l~~-~~~~i~~~~~i~Y~l~g~l~~  124 (151)
T d1xo8a_          91 DIPVVVPY---SILFN-LARDVGVDWDIDYELQIGLTI  124 (151)
T ss_dssp             EECCCEEH---HHHHH-HHHHHHHHSEEEEEEEEEEEE
T ss_pred             EEEEEEEH---HHHHH-HHHhhccCCCccEEEEEEEEE
Confidence            88776541   22222 23333 345566655444443